Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_06g0102800 | OGI:06000340 | 15/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr06:195018-204322 | ||||||||
| Gene Symbol | CHR723, OsCHR723 | ||||||||||
| DNA seq | GTCTCCCCCTCCGGCTCCGTCCGACCAATCCGCCCCGCATAAACCCCCGCGACTGCCGGCGCCGCATCCCCTCCGCTCCGGCCGGCCCGACCAGAGAGCACTGCCCACTGGCCACTGGAGTGGACTCGCGGGAACATCTGGGCGCCGCCACTGATCGATCTCCTCTCCGTCCGTCCTCTACCTGGTAAGCCCTAGTTTGTTTGTTTGTTTGTTTGTGTTTTCAACCCTGGCCTCAATTGACATTGGCGTCGGCAGGGGCAGGGCAGCTAGGTGATCGATGCCAAGGAAGAAGGCCAGCTCGCCCTCGCCGACCTCCACCGCCAGGGAGACTAGAAGCTCCTCCGCTCGTGGTCATGCATCACCAACCCCAACCCCAACCCTCAGGAGGTCCACCCGAGAAACCACATCCAGATTTTCTTCTTCTTCTTCGTCTTCCGCAAACAAGCACGAAGGCTCCCCCGCCAAGCAAAGTGCCAACAACAACACCGCAAAACGGAAGATGAATAATGCTGCCGCAGATACCTCCACCAGGCCAATCAAGAAGAACAAAAAGCTAAACGCAAAGTCCTATTTAGCACTCTTCTCCACACCCCAACAAACCGCCAAATCCCCTCCTGCCCCTGGTATGTATTTCATCTCTTTCTCTTCTTTATTTATCGAGGAGGAAATTCCCGGCTGTATTCTAACTTTGGCAATGTAGCCCCTCCTCTCCTAGTCCAAGTGGATGACGACAATGCTTCCACGGTGCCTATGCAAGACAGTGGCACTCTTCTGGAGCATGAAGAAGCTGACACACAAGAGCAAGGTTACCAGTCTGGCTTGCACAAAGTTCCTGAGGTGGTACTGGAGGAGACTGATGTCTCCAAGAACAAAGCTGATGAACATGCTTCCACTTCTGAGGTCTCATCCTTCCTAGGCCTTAAACCCCTGAGTAACATCATAACTAGATATCTGCTTATTTCAGTATTACGTGTTCTGTTTGTTTATACCTGCAAAATCTTATACGACCTCTGGAGGGAGCTACTTTGGTTTATAATAATATGACCAAACACAGTATCTGCCAGATGAGGATACTTACTACACATGCTCTTTTCTGTTTACCACCTCAGTCCCTTTAATTACTATGTTTCATGGCTCTTAGCAGCACCCTGGTTCTTTGAATATTGTGTTATGTTAGTTCCGTTTGTTTTGAGAGATATAAGATTTGCAACTCCATTGTGGTGCACTCTAGGATTTGCCTTATCCGCCATTTTGTTGGAGTGACAAATTCTTGATTGCCCCCATCCTAGTCATTAATGATCTTTCAAGTTCCATGTGTACAAGGGAATTAAAAGCGTAACATGTATTTTTCTACAGCCACTTATTCCTGTTGATCTGTGTTCAAACGATAATGCTTCTGAAAGCAGCCATGGGATGGAAGTCAAAGAGCAAACCGTGGGATGTTCAAAGTAATCCACTTATCACTGTGTGAATGCTGATTTTCCTATAGAGTTGTTACCACTTACCATGATGACGCTGAGCATCACCCTTTCATTTTGCAGCCCATGTTTTGTAACAGATTTGCCAAATAGGCCTTGCTCCATTGTTCATCATGAAGAGGTGATACTAAAACAAGTCTTTCAGCATCTTTTTCTGTCACTAGCATTGTATTTCTTCTGTCTTCGTTTTGGTGGAACAGGACCAACATTTTTAGTTAATGTTCTTTTGATGCTTCTCTAGGCCAAGAAGACAATTGAAGCAGGTGATCCCAGAGAGATCAAAGGGGCTTCTACTTCAAATCAGGCTTTAGTAACCCATTCTGATGGAACAGATTACAACGAGTACCTGTGTGCTGTTTGCAGAAGTAGGGAAACCCCAGGAATTCTCAAGTAAGTCAATTTACTTCATTCTTGCTGCTCCTTGCGGTGCTGTTCCTTTCTGTTACTTCTGCAGATCCTGTCCATTCTTGCTGTGGATCCTGTATTGGCTTTCCACATGTTAAACTGTTCATGCCCCAGTGTAGAAAATATGTGGTGATTGTTACTCCCATTGACAGCTGGCATTCTGTACAGTGAGTTAATACCAGTGACAAAACACTCTCAAACTGCCAAATGTATGGAGGGCACTGTGACCACCTGCCCTTCGTGAGGATGGAGGGATTTGGGACTATCTGCGACTGTGGAGGTTGATCCAGGCCATGTAGCCTCCCTCGTTGGTTGGTTGGTAGGGGCTACTTCTGCCTCTTTTGTAGGTTTAAAATGAGGCAGCTCAGGAGATGCCACCATGAAAGGCTGTGGGAGAGGTCATTCAAGAAGAATTTGTATGACAGAATGGGGCACACCGGCAGTGTGATGGGATCATGGGAGTAGTAGGTGGTAGGGTACGAGAAGGTGGCAGTGGAGCATGAGAGGAGAGAGGGTACGAAGATAGTCCGTTGGACTTGAGTGAATAGTGTGCCCTTTATCCTTCATATCTTCTTCTCTTTATTTTTTTCACATTCATGCTGTGGATATAATAGTTGGCTTTGTTAGATTGTGTTTTCGGCATATACTTAATTTGTAAGGATCTCAATAATTTTAAATCATCGTTTCTTTTTTCAATCTGGTAACAGGTCTTGTGATGGAAAAGATTGCAAAAATCGGTACCATGATTCTTGTCTGGATCCTCCCCTGCAATATGTGTCGCTAGGTATCTGGTTGTGCACCTTATGTACTAAAAAGAGGCTCCAGTTTGGTTTATTTGCAGTCAGTGAGGGCATTGAATCTTTGTGGGATGTTAAGGAAGGTAAGTACTAAATAAAGCGACAAAACATATAGATAGATATCTTGAAGTGTAACCATTCATTTATTAGTTCTATTACTTTGTCACCCTAGGAGTGCAGAACAACAAGCAGTATTTTGTGAAGTACAAAAATTTAGCTCATGTACATAATCAATGGCTTCCAGAAAGCGATATAATTCGCACCCCAGGAGGTCAAGATCTAATCAACAAATTTTGTAAGAGGATTCAAAAAGAAAAGGTGGTCTCTGTGAATTTTTTGTTTTGTCATATTAGAAGAGACTATTAGGTTCTGCAAGCCTACTGATGTTTGTCCTTTTCAAATGTGGTTTCTTAGACAATAAGGTGGAAGCAGGAATGGGCTGAGCCACACCGGCTATTGAAGAAAAGACCTCTTATGTCTGAAAAGGAAGCTGAAGAATTTTTTAATTCACTTGGTGATAAATTTGCTTACTGTAATGTCGAATGGTTAGTGAAATGGAAAGATCTGGGCTATGAGTATGCAACATGGGAGCTTGAGACTTCATCATTTTTATGTACCCCTGAGGCTAAGGATCTGAAAAGGAACTATGAGAGCCGCCATGAAGATGCAAGAAGAGGTTTTGATCCTGCAAAAATAAATAAGGTATACCTCTGAGAACAGTTATCCACATTAACTGATTCACCATTGCTTAATTGGATAAGGATCACACATATCACCTGTACATGCTGATCTGCTGCATGCATGCATTTTTGTGGTTGTCCACCTCATAAAAATAATGATGTTTGTAAATTTTTAATAAACTATTGACTTCTTTTCATAGTCATGTCTTATCTTCATGTCATTTTATTGTACAAATTCGACCAGTTATGGCCGGTTGATTATCAGAAATTGAAGCTTTATAATTGGTTCTCAATCAACTTTGAATCTATACCAATGATCTTCTGTGCTGTTTGTTAACCTTGTCTTTCTCCTTTCATGCTACATTTTGCACTTCTAATTCTTCAGTGATTTAATTCTTATTCTACATGAAACAGCAGGTGTATTTCTGACTGAGTTCTTGTTAGATTCTTCGTGTCATTTACCTTATATAAACCCATAGTCTCCTAGAATCATTTTGAATTGCTAAAATTTGGTCGGACAACTTTTTTGTACTTACTCCCTCCAACCAAAAATATAAGGCCTAGTAGCTTTTTACATTGTCTCCAACATTATACTTTGACCATTAATTTCTTTTATAATATATCAACAACTATGAAATTAACATTATGTGAAAGCAATTTCAAATGCTATTCGAATGATATCACATTCAATATGCATGAAATTAAACATGTGTTTTGTTAGTTCAATTATTAGTCAAAATTTTCAGATGTTGATTTTCCTAAAAATAAGGATGCCCTATATTTTTGGATGGAGGGAATAACATTTTGCTCATGTAACTTCACTGGTATCATTCGGTTACTGGCATTTTCTTAGTTTGTTTCATGCTTTCCAAGTTAGTTCATTATGGGCCTGTTTGGCATAGCTCCAGCTCCAACTCCACCTCTCATGGAGTTGGAGCTCAGCCAAACAGTTTCAGCTCCACCTAAAATGGGAGTAGAGCTGGGTGGAGTCTCTCACAAAATGAACTAGAGAGGTGGAGCTGGGTTTAGGCAGCTCCACAACTCCACTCCAGACCCAACTCCTAGAGCTAAATTTAGGAATTGGAGCTCTACCAAACAGGCCCTATGTTTAAATCCATATATTCATTAGGACTGTTTGAAATGTGGGAACCCGCAGGGAGATACACTCTTTCCTATATGACTATATTTGAAACATGTCTTAGACTGGTATATCTTTCTATGATTATGCAGGTTTCTCTTTAAATAACTCAATGGGGGTGTTTTTTCTTAAATATTAACAGTTTATAGTGTCTTTGGTGTTTACAGGGTAAGCAATGTCTGTTTCAGAAACTTCAGAAGCTACCGGATGGGTTCCCCCCTGGTTTAGACAAAGATCATTTGAGTTCACTTAACCGGCTCCGCGAGTTCTGGCACAATTCTGATGGTGCTATTTGTCTCGATGATCAGGTAGTACTCTCTGAATGTTTTAGCTGCTATGCACAAGAACTGATATAGCGTTTACTCCAACTTGGGTTGGCTTCCTTTTTTTTCACCCACCCACTTTTGTCAGTTCTTACTTCTTAGTTATAAGTATATAGTGGACTGCATGGCTAAATGCTGTAGTGCCCTTGACATTTTATTGTGGATTCTTTCCAGTTATGTTCCACATCTGAAGGTTTAACTATGTAACTTATCTATTGACTTTATACAGGAGAGAGTAATCAAAACCATTCTTTTTTCTATGTCCATATTGCCTGATGTCTGCCAACCACTTCTCATTGTCTCTACTTCTGCTTCTCTCTCATTGTGGGAAGCTAAGTTCAATCGCTTGGCACCATCGATCAATGTTGTTGTGTATAATGGGGAGAAAGACGTACGCAAACAGATTCAAGATTTGGAGTTTTATGAGAACGGTTTGGTGACGTTTCAAGTTCTCTTGTCCCATCCTGATGCCATCCTAGAGGTACTTGTTTCTCATTTCCATCAGCATCAAAACACATCAATGACTACTCTTGTTCTCATTTCCATCAGCATTATCCAATCATGAAAGTCAGCTATCAAGATTACTCACATCCTATTTCTTTCCTTTTTTCCACTGTAATACAGGACATTCAGACCATGGAATCAATTGTTTGGGAGGCAGTTATGGTTGACGATTGTCAAAGCTTGAGAGTTTCAAAATGCCTTGAACAACTTAAGCATCTTTCTACCAATTTTAGGATGGTTCTTTTGAGTTTCCCACTCAAGGTGCTGTTAGCAACCGTAACCTGTAGAATTATTTTCACTCTTTTTCCACAAACAGGCAATGTTAATTCCTTTTGTTTTGCAGGAGAGTATTCCTGAGTACATCAACCTGCTGTCTTTCCTCAACCCTGAAGGAAGTGTCATTTCGAGTAGTTCAAATGGTGATTTTACTGATACAGGTGATATCTTAGCAACGCTGAAAGAAAAATTTGCTCGTCATGTTGCATTTGAGCGGAAAGCAGATTCTTCAAAATTTTTGGAGTACTGGGTTCCTGCTCGTCTTTCACGAGTGCAGCTAGAAATGTACTGTTATACCTTACTTTCAAACTCCCCAGCACTCCGATCACACTCAAGAACTGATAGTGTTGGTGCTCTTCGTGACATTCTTGTATCCCTCCGGAAGGTTTGCTCTTCAATTTTCTGAGCACAATATATTGTTTTAATTCATGGCAGGGAATTAGATAGTCTAGATGATGGAATCTGTATGCAACAGTTTCTTCTGACATAGCTGCTGACACAATATATCCTTGTTTCTTCTGGCACAGTGCTGTGACCACCCTTACCTGGTTGATCAATCACTGCAAAGCTCACTTACTAAGGGCCATTCTCTGACTGATATTCTAGATATTGGAGTGTGTGCAAGTGGCAAGCTACTGCTGCTTGATAAAATGCTCCAAGAGATCAGAAACCAAGGCCGGAGAGTTCTCATTGTTTCCCAGGCAAGATACTAGATAACATTCATCCATAATGTTTTTACATGCTATACTTAAATCCAAAGTTGTGAAGAGTGATTGCTTAGTACATAAGTCCAAAGTTTACTTTCCTCAAACATATTTGGGTGTTTTCTTATCATTTCCAAAGATAGTCATTGCTATGCGCAATTATTATCATCTGAGAAAAATATTGTGAGCTGTCTTTAATATGCACGTTTTAGTGTCAGGGCTTAACCACTCAAATTAGGGCAGTATCTGACTTGCCTCAAATGCAACATCAAGGGCTGCATAAAAACCTTACACGATTTAATACAGTCATGCAGAACATGTAGGGCTGGTGTCTCTCTCTATAAAAATTCTTAGGGCTGTAGCTGGGGTAGAATGCAGTTGTTTGCTTGAGCCCTCCTGTTCATATTTTATACTAGAAACAAAGGCTCAAACCATGTTATTCTAGCTTGCACACTCCATATTCTGCAGGAATCCAGGTGTTGGAGCTGCACCATATGAACCCTACCAAAAAGAATTAAATAAGTTACTGAAATGTACAAAGTACAAACTCTTTTAGGAGTATATACTTCTTTATTTCTAATTGAACTCATTATTTCGATATGCTTTGGTTCATCACTTATAGAACTTAAGTGTTTGGCATTCTTATATTTTTCTTCCAAAGTATGTCAGTCCAATCTGGTTCTCCTTTTTCTTATATGGCAGTCTGGTGGCGGGGCTGGCAACCCTATGGGTGACATTTTGGATGATTTTGTCCGTCAGAGATTTGGTTTTGAGTCATATGAGCGTGTAGAACGCGGATTGCTAGTGCCGAAGAAACAAACAGCACTGAATATGTTCAATGACAAAACTAAGGGGCGTTTTATTTTCTTGATTGATAGTCGTGCTTGTGTTCCAAGCATTAAATTATCATCTGTCGATGCCATCATCATATATTGTAGTGATTGGAATCCAACCAATGACTTGAGAGTTCTCCAGAGGATCAGTATAGAGTCTCAATCTGAATGTGTGCCTATTTTTCGCTTGTATTCGTCTTGTACGGTGGAGGAAAAGACTCTTATACTAGCGAAGCATGATCATATTCTTGACAGCAACGTCCAGAATGTAATGCCTATCGTGAGCCATTCCCTGCTTAGTTGGGGTGCATCGTTTCTCTTCAATAGACTTGAGGAGTTCCAAAAGCATGACTACTCCAGTAAAGATTCTGAGGATGATGGTCTCTTCATGAATAATGTATTTTTGGAGTTTGCAGCGAAACTATCCACCAACGTTGAAGCCAGCACTAAAATGGAAAATGCAGTCATATCTCGAGCTCAGCAGAGTGGATCGTTTTATTCTAGAGATATTGCTGTTATAAGCGAGAGGGAGGGAATATCTGCAGTTGATGGTGATTTGCCAAAGTTCTGGACCTTCTGGTCAAATTTACTAGGTGGGAGGTCTCCTCATTGGCAATATATATCTGAGCCAGTGCAAAGGAACCGTAGGAAGATACAAAATATGGAAGACCAAATGAGAATACCTGCAGAAGAAACTGATGAAGCAATAATGAAACGTAGAAAAATCGGAGAAATCATGGATTCATCTCCGAAGATCCTACCTGTCAAAGACAATGATGCTGTGCTGCCTGAAAATAGTACAGCATCCAGTTCTCATGAAACATCAGTTGATGACACTTGGCAAGAGCTAGGTATTCCAACTGTAACAGTAATTAACAGCTCTTATGCTTTATGTGCATATGCTACATTTTTTTATAATACACTCCATTTTGTAGGGGCAGAAAGCCTTCAGGGCACACAGAAAGGTCTTCACACCCAACTCAAGCCAGAGCTGTCAAAGTTGTATGAATTGTTGGAATTGCCGGTACTGCCAAGTATATTAAAATAAATGCTTGCTTTATGTTATTAATTTGAGAAAAATATTTTAGTTCACTGCAAGTACAGGACATAATCTGCTCTTTTAGCATTCAATTTAATAGCTAATATTTTTTAGTTTTCAACAGCAGAGTTCCACACCTTGTGAAGAGTTATTTATCAAGTTGGATCTTGATAACTTTTGCTCTTCATAACGGAAACATTTTCTTTGACTCTTAGTGTGTCATTTTGATCCATATATGTTACTTCCTCCGTTTCACAATGTAAGACTTTCTAGCATTGCCCACATTCATTTAGATGTTAATGAATCCAGACATATGTATGTGTTTAGATTCATTAACATATATATGTATGTGGGCAATACTAGAAAGTCTTACATTGTGAAATGGAGGGAGTATTAGTTGCTACTATATCCTGCTTTTAGCTCAGGTTATGAGCTTTGATATCACCTACTCCCTCCGCCCCATAGAAAACCAACCTAGTACTGGATGCCTGTCTAGATTCGTAGTACTAGGATGTGTCACATCCGGTACTAGGTTGGTTTTCTATGGGACGGAGGGAGTGCATGTTTCTACATGCTTCCAATATGAATTTATGCAGGACAGCTGTGTCCTGCAGTCCTGCTGTTAAAAAGTTGCCTCCTCTTCTGTAGAATTTATGCAGCATGCTGTTACCCTAAGTTTCAGTTTAAGCGAACTTTTCCTGAAGTCACTTGATTCTCTAGTTAAATAATATAAGCTGATTGGATGCTTGGATGCTTGATAAAACCTTTTGCAGGAGACTGTCAAATGTTTATGTGAGGAATTACTTGATTACATTTTGAAGAATCATCAAGTCAGTCAGGAGCCAAAGGGCATATTGCATGCATTCAACATTGCCCTGGTTAGATTATAAAAATATTTTATAGGTTTTTTAGCTAAATTTGCATGGCTAAATGCTATTATTTTTTCCATGTGCTTTTCAGTGTTGGCGTGCTGCTTCTCTCTTAAAGCATAAGATCAATCGAAGAGAGTCACTTGCCCTTTCTGTGAGAAACTTGAACTATGAGTGCGATGAAGTGCTCGCTGAATATGTTTATGAGAAGCTAAGGATCCTCAAGAAAAAGTTTTCGCGTAGAGCAAGTGAAACAAGC
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| CDS seq | ATGCCAAGGAAGAAGGCCAGCTCGCCCTCGCCGACCTCCACCGCCAGGGAGACTAGAAGCTCCTCCGCTCGTGGTCATGCATCACCAACCCCAACCCCAACCCTCAGGAGGTCCACCCGAGAAACCACATCCAGATTTTCTTCTTCTTCTTCGTCTTCCGCAAACAAGCACGAAGGCTCCCCCGCCAAGCAAAGTGCCAACAACAACACCGCAAAACGGAAGATGAATAATGCTGCCGCAGATACCTCCACCAGGCCAATCAAGAAGAACAAAAAGCTAAACGCAAAGTCCTATTTAGCACTCTTCTCCACACCCCAACAAACCGCCAAATCCCCTCCTGCCCCTGCCCCTCCTCTCCTAGTCCAAGTGGATGACGACAATGCTTCCACGGTGCCTATGCAAGACAGTGGCACTCTTCTGGAGCATGAAGAAGCTGACACACAAGAGCAAGGTTACCAGTCTGGCTTGCACAAAGTTCCTGAGGTGGTACTGGAGGAGACTGATGTCTCCAAGAACAAAGCTGATGAACATGCTTCCACTTCTGAGCCACTTATTCCTGTTGATCTGTGTTCAAACGATAATGCTTCTGAAAGCAGCCATGGGATGGAAGTCAAAGAGCAAACCGTGGGATGTTCAAACCCATGTTTTGTAACAGATTTGCCAAATAGGCCTTGCTCCATTGTTCATCATGAAGAGGCCAAGAAGACAATTGAAGCAGGTGATCCCAGAGAGATCAAAGGGGCTTCTACTTCAAATCAGGCTTTAGTAACCCATTCTGATGGAACAGATTACAACGAGTACCTGTGTGCTGTTTGCAGAAGTAGGGAAACCCCAGGAATTCTCAAGTCTTGTGATGGAAAAGATTGCAAAAATCGGTACCATGATTCTTGTCTGGATCCTCCCCTGCAATATGTGTCGCTAGGTATCTGGTTGTGCACCTTATGTACTAAAAAGAGGCTCCAGTTTGGTTTATTTGCAGTCAGTGAGGGCATTGAATCTTTGTGGGATGTTAAGGAAGGAGTGCAGAACAACAAGCAGTATTTTGTGAAGTACAAAAATTTAGCTCATGTACATAATCAATGGCTTCCAGAAAGCGATATAATTCGCACCCCAGGAGGTCAAGATCTAATCAACAAATTTTGTAAGAGGATTCAAAAAGAAAAGACAATAAGGTGGAAGCAGGAATGGGCTGAGCCACACCGGCTATTGAAGAAAAGACCTCTTATGTCTGAAAAGGAAGCTGAAGAATTTTTTAATTCACTTGGTGATAAATTTGCTTACTGTAATGTCGAATGGTTAGTGAAATGGAAAGATCTGGGCTATGAGTATGCAACATGGGAGCTTGAGACTTCATCATTTTTATGTACCCCTGAGGCTAAGGATCTGAAAAGGAACTATGAGAGCCGCCATGAAGATGCAAGAAGAGGTTTTGATCCTGCAAAAATAAATAAGGGTAAGCAATGTCTGTTTCAGAAACTTCAGAAGCTACCGGATGGGTTCCCCCCTGGTTTAGACAAAGATCATTTGAGTTCACTTAACCGGCTCCGCGAGTTCTGGCACAATTCTGATGGTGCTATTTGTCTCGATGATCAGGAGAGAGTAATCAAAACCATTCTTTTTTCTATGTCCATATTGCCTGATGTCTGCCAACCACTTCTCATTGTCTCTACTTCTGCTTCTCTCTCATTGTGGGAAGCTAAGTTCAATCGCTTGGCACCATCGATCAATGTTGTTGTGTATAATGGGGAGAAAGACGTACGCAAACAGATTCAAGATTTGGAGTTTTATGAGAACGGTTTGGTGACGTTTCAAGTTCTCTTGTCCCATCCTGATGCCATCCTAGAGGACATTCAGACCATGGAATCAATTGTTTGGGAGGCAGTTATGGTTGACGATTGTCAAAGCTTGAGAGTTTCAAAATGCCTTGAACAACTTAAGCATCTTTCTACCAATTTTAGGATGGTTCTTTTGAGTTTCCCACTCAAGGAGAGTATTCCTGAGTACATCAACCTGCTGTCTTTCCTCAACCCTGAAGGAAGTGTCATTTCGAGTAGTTCAAATGGTGATTTTACTGATACAGGTGATATCTTAGCAACGCTGAAAGAAAAATTTGCTCGTCATGTTGCATTTGAGCGGAAAGCAGATTCTTCAAAATTTTTGGAGTACTGGGTTCCTGCTCGTCTTTCACGAGTGCAGCTAGAAATGTACTGTTATACCTTACTTTCAAACTCCCCAGCACTCCGATCACACTCAAGAACTGATAGTGTTGGTGCTCTTCGTGACATTCTTGTATCCCTCCGGAAGTGCTGTGACCACCCTTACCTGGTTGATCAATCACTGCAAAGCTCACTTACTAAGGGCCATTCTCTGACTGATATTCTAGATATTGGAGTGTGTGCAAGTGGCAAGCTACTGCTGCTTGATAAAATGCTCCAAGAGATCAGAAACCAAGGCCGGAGAGTTCTCATTGTTTCCCAGTCTGGTGGCGGGGCTGGCAACCCTATGGGTGACATTTTGGATGATTTTGTCCGTCAGAGATTTGGTTTTGAGTCATATGAGCGTGTAGAACGCGGATTGCTAGTGCCGAAGAAACAAACAGCACTGAATATGTTCAATGACAAAACTAAGGGGCGTTTTATTTTCTTGATTGATAGTCGTGCTTGTGTTCCAAGCATTAAATTATCATCTGTCGATGCCATCATCATATATTGTAGTGATTGGAATCCAACCAATGACTTGAGAGTTCTCCAGAGGATCAGTATAGAGTCTCAATCTGAATGTGTGCCTATTTTTCGCTTGTATTCGTCTTGTACGGTGGAGGAAAAGACTCTTATACTAGCGAAGCATGATCATATTCTTGACAGCAACGTCCAGAATGTAATGCCTATCGTGAGCCATTCCCTGCTTAGTTGGGGTGCATCGTTTCTCTTCAATAGACTTGAGGAGTTCCAAAAGCATGACTACTCCAGTAAAGATTCTGAGGATGATGGTCTCTTCATGAATAATGTATTTTTGGAGTTTGCAGCGAAACTATCCACCAACGTTGAAGCCAGCACTAAAATGGAAAATGCAGTCATATCTCGAGCTCAGCAGAGTGGATCGTTTTATTCTAGAGATATTGCTGTTATAAGCGAGAGGGAGGGAATATCTGCAGTTGATGGTGATTTGCCAAAGTTCTGGACCTTCTGGTCAAATTTACTAGGTGGGAGGTCTCCTCATTGGCAATATATATCTGAGCCAGTGCAAAGGAACCGTAGGAAGATACAAAATATGGAAGACCAAATGAGAATACCTGCAGAAGAAACTGATGAAGCAATAATGAAACGTAGAAAAATCGGAGAAATCATGGATTCATCTCCGAAGATCCTACCTGTCAAAGACAATGATGCTGTGCTGCCTGAAAATAGTACAGCATCCAGTTCTCATGAAACATCAGTTGATGACACTTGGCAAGAGCTAGGGGCAGAAAGCCTTCAGGGCACACAGAAAGGTCTTCACACCCAACTCAAGCCAGAGCTGTCAAAGTTGTATGAATTGTTGGAATTGCCGGAGACTGTCAAATGTTTATGTGAGGAATTACTTGATTACATTTTGAAGAATCATCAAGTCAGTCAGGAGCCAAAGGGCATATTGCATGCATTCAACATTGCCCTGTGTTGGCGTGCTGCTTCTCTCTTAAAGCATAAGATCAATCGAAGAGAGTCACTTGCCCTTTCTGTGAGAAACTTGAACTATGAGTGCGATGAAGTGCTCGCTGAATATGTTTATGAGAAGCTAAGGATCCTCAAGAAAAAGTTTTCGCGTAGAGCAAGTGAAACAAGC
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| Protein seq | MPRKKASSPSPTSTARETRSSSARGHASPTPTPTLRRSTRETTSRFSSSSSSSANKHEGSPAKQSANNNTAKRKMNNAAADTSTRPIKKNKKLNAKSYLALFSTPQQTAKSPPAPAPPLLVQVDDDNASTVPMQDSGTLLEHEEADTQEQGYQSGLHKVPEVVLEETDVSKNKADEHASTSEPLIPVDLCSNDNASESSHGMEVKEQTVGCSNPCFVTDLPNRPCSIVHHEEAKKTIEAGDPREIKGASTSNQALVTHSDGTDYNEYLCAVCRSRETPGILKSCDGKDCKNRYHDSCLDPPLQYVSLGIWLCTLCTKKRLQFGLFAVSEGIESLWDVKEGVQNNKQYFVKYKNLAHVHNQWLPESDIIRTPGGQDLINKFCKRIQKEKTIRWKQEWAEPHRLLKKRPLMSEKEAEEFFNSLGDKFAYCNVEWLVKWKDLGYEYATWELETSSFLCTPEAKDLKRNYESRHEDARRGFDPAKINKGKQCLFQKLQKLPDGFPPGLDKDHLSSLNRLREFWHNSDGAICLDDQERVIKTILFSMSILPDVCQPLLIVSTSASLSLWEAKFNRLAPSINVVVYNGEKDVRKQIQDLEFYENGLVTFQVLLSHPDAILEDIQTMESIVWEAVMVDDCQSLRVSKCLEQLKHLSTNFRMVLLSFPLKESIPEYINLLSFLNPEGSVISSSSNGDFTDTGDILATLKEKFARHVAFERKADSSKFLEYWVPARLSRVQLEMYCYTLLSNSPALRSHSRTDSVGALRDILVSLRKCCDHPYLVDQSLQSSLTKGHSLTDILDIGVCASGKLLLLDKMLQEIRNQGRRVLIVSQSGGGAGNPMGDILDDFVRQRFGFESYERVERGLLVPKKQTALNMFNDKTKGRFIFLIDSRACVPSIKLSSVDAIIIYCSDWNPTNDLRVLQRISIESQSECVPIFRLYSSCTVEEKTLILAKHDHILDSNVQNVMPIVSHSLLSWGASFLFNRLEEFQKHDYSSKDSEDDGLFMNNVFLEFAAKLSTNVEASTKMENAVISRAQQSGSFYSRDIAVISEREGISAVDGDLPKFWTFWSNLLGGRSPHWQYISEPVQRNRRKIQNMEDQMRIPAEETDEAIMKRRKIGEIMDSSPKILPVKDNDAVLPENSTASSSHETSVDDTWQELGAESLQGTQKGLHTQLKPELSKLYELLELPETVKCLCEELLDYILKNHQVSQEPKGILHAFNIALCWRAASLLKHKINRRESLALSVRNLNYECDEVLAEYVYEKLRILKKKFSRRASETS |
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| Function | Helicase protein MOM1 [UniProtKB/Swiss-Prot:Q9M658] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_06g0102800 | OsNip_06t0102800-01 | Chr06 | 195018 | 204322 | + | RAP2018-11-26 | ||
| CDS seq | ATGCCAAGGAAGAAGGCCAGCTCGCCCTCGCCGACCTCCACCGCCAGGGAGACTAGAAGCTCCTCCGCTCGTGGTCATGCATCACCAACCCCAACCCCAACCCTCAGGAGGTCCACCCGAGAAACCACATCCAGATTTTCTTCTTCTTCTTCGTCTTCCGCAAACAAGCACGAAGGCTCCCCCGCCAAGCAAAGTGCCAACAACAACACCGCAAAACGGAAGATGAATAATGCTGCCGCAGATACCTCCACCAGGCCAATCAAGAAGAACAAAAAGCTAAACGCAAAGTCCTATTTAGCACTCTTCTCCACACCCCAACAAACCGCCAAATCCCCTCCTGCCCCTGCCCCTCCTCTCCTAGTCCAAGTGGATGACGACAATGCTTCCACGGTGCCTATGCAAGACAGTGGCACTCTTCTGGAGCATGAAGAAGCTGACACACAAGAGCAAGGTTACCAGTCTGGCTTGCACAAAGTTCCTGAGGTGGTACTGGAGGAGACTGATGTCTCCAAGAACAAAGCTGATGAACATGCTTCCACTTCTGAGCCACTTATTCCTGTTGATCTGTGTTCAAACGATAATGCTTCTGAAAGCAGCCATGGGATGGAAGTCAAAGAGCAAACCGTGGGATGTTCAAACCCATGTTTTGTAACAGATTTGCCAAATAGGCCTTGCTCCATTGTTCATCATGAAGAGGCCAAGAAGACAATTGAAGCAGGTGATCCCAGAGAGATCAAAGGGGCTTCTACTTCAAATCAGGCTTTAGTAACCCATTCTGATGGAACAGATTACAACGAGTACCTGTGTGCTGTTTGCAGAAGTAGGGAAACCCCAGGAATTCTCAAGTCTTGTGATGGAAAAGATTGCAAAAATCGGTACCATGATTCTTGTCTGGATCCTCCCCTGCAATATGTGTCGCTAGGTATCTGGTTGTGCACCTTATGTACTAAAAAGAGGCTCCAGTTTGGTTTATTTGCAGTCAGTGAGGGCATTGAATCTTTGTGGGATGTTAAGGAAGGAGTGCAGAACAACAAGCAGTATTTTGTGAAGTACAAAAATTTAGCTCATGTACATAATCAATGGCTTCCAGAAAGCGATATAATTCGCACCCCAGGAGGTCAAGATCTAATCAACAAATTTTGTAAGAGGATTCAAAAAGAAAAGACAATAAGGTGGAAGCAGGAATGGGCTGAGCCACACCGGCTATTGAAGAAAAGACCTCTTATGTCTGAAAAGGAAGCTGAAGAATTTTTTAATTCACTTGGTGATAAATTTGCTTACTGTAATGTCGAATGGTTAGTGAAATGGAAAGATCTGGGCTATGAGTATGCAACATGGGAGCTTGAGACTTCATCATTTTTATGTACCCCTGAGGCTAAGGATCTGAAAAGGAACTATGAGAGCCGCCATGAAGATGCAAGAAGAGGTTTTGATCCTGCAAAAATAAATAAGGGTAAGCAATGTCTGTTTCAGAAACTTCAGAAGCTACCGGATGGGTTCCCCCCTGGTTTAGACAAAGATCATTTGAGTTCACTTAACCGGCTCCGCGAGTTCTGGCACAATTCTGATGGTGCTATTTGTCTCGATGATCAGGAGAGAGTAATCAAAACCATTCTTTTTTCTATGTCCATATTGCCTGATGTCTGCCAACCACTTCTCATTGTCTCTACTTCTGCTTCTCTCTCATTGTGGGAAGCTAAGTTCAATCGCTTGGCACCATCGATCAATGTTGTTGTGTATAATGGGGAGAAAGACGTACGCAAACAGATTCAAGATTTGGAGTTTTATGAGAACGGTTTGGTGACGTTTCAAGTTCTCTTGTCCCATCCTGATGCCATCCTAGAGGACATTCAGACCATGGAATCAATTGTTTGGGAGGCAGTTATGGTTGACGATTGTCAAAGCTTGAGAGTTTCAAAATGCCTTGAACAACTTAAGCATCTTTCTACCAATTTTAGGATGGTTCTTTTGAGTTTCCCACTCAAGGAGAGTATTCCTGAGTACATCAACCTGCTGTCTTTCCTCAACCCTGAAGGAAGTGTCATTTCGAGTAGTTCAAATGGTGATTTTACTGATACAGGTGATATCTTAGCAACGCTGAAAGAAAAATTTGCTCGTCATGTTGCATTTGAGCGGAAAGCAGATTCTTCAAAATTTTTGGAGTACTGGGTTCCTGCTCGTCTTTCACGAGTGCAGCTAGAAATGTACTGTTATACCTTACTTTCAAACTCCCCAGCACTCCGATCACACTCAAGAACTGATAGTGTTGGTGCTCTTCGTGACATTCTTGTATCCCTCCGGAAGTGCTGTGACCACCCTTACCTGGTTGATCAATCACTGCAAAGCTCACTTACTAAGGGCCATTCTCTGACTGATATTCTAGATATTGGAGTGTGTGCAAGTGGCAAGCTACTGCTGCTTGATAAAATGCTCCAAGAGATCAGAAACCAAGGCCGGAGAGTTCTCATTGTTTCCCAGTCTGGTGGCGGGGCTGGCAACCCTATGGGTGACATTTTGGATGATTTTGTCCGTCAGAGATTTGGTTTTGAGTCATATGAGCGTGTAGAACGCGGATTGCTAGTGCCGAAGAAACAAACAGCACTGAATATGTTCAATGACAAAACTAAGGGGCGTTTTATTTTCTTGATTGATAGTCGTGCTTGTGTTCCAAGCATTAAATTATCATCTGTCGATGCCATCATCATATATTGTAGTGATTGGAATCCAACCAATGACTTGAGAGTTCTCCAGAGGATCAGTATAGAGTCTCAATCTGAATGTGTGCCTATTTTTCGCTTGTATTCGTCTTGTACGGTGGAGGAAAAGACTCTTATACTAGCGAAGCATGATCATATTCTTGACAGCAACGTCCAGAATGTAATGCCTATCGTGAGCCATTCCCTGCTTAGTTGGGGTGCATCGTTTCTCTTCAATAGACTTGAGGAGTTCCAAAAGCATGACTACTCCAGTAAAGATTCTGAGGATGATGGTCTCTTCATGAATAATGTATTTTTGGAGTTTGCAGCGAAACTATCCACCAACGTTGAAGCCAGCACTAAAATGGAAAATGCAGTCATATCTCGAGCTCAGCAGAGTGGATCGTTTTATTCTAGAGATATTGCTGTTATAAGCGAGAGGGAGGGAATATCTGCAGTTGATGGTGATTTGCCAAAGTTCTGGACCTTCTGGTCAAATTTACTAGGTGGGAGGTCTCCTCATTGGCAATATATATCTGAGCCAGTGCAAAGGAACCGTAGGAAGATACAAAATATGGAAGACCAAATGAGAATACCTGCAGAAGAAACTGATGAAGCAATAATGAAACGTAGAAAAATCGGAGAAATCATGGATTCATCTCCGAAGATCCTACCTGTCAAAGACAATGATGCTGTGCTGCCTGAAAATAGTACAGCATCCAGTTCTCATGAAACATCAGTTGATGACACTTGGCAAGAGCTAGGGGCAGAAAGCCTTCAGGGCACACAGAAAGGTCTTCACACCCAACTCAAGCCAGAGCTGTCAAAGTTGTATGAATTGTTGGAATTGCCGGAGACTGTCAAATGTTTATGTGAGGAATTACTTGATTACATTTTGAAGAATCATCAAGTCAGTCAGGAGCCAAAGGGCATATTGCATGCATTCAACATTGCCCTGTGTTGGCGTGCTGCTTCTCTCTTAAAGCATAAGATCAATCGAAGAGAGTCACTTGCCCTTTCTGTGAGAAACTTGAACTATGAGTGCGATGAAGTGCTCGCTGAATATGTTTATGAGAAGCTAAGGATCCTCAAGAAAAAGTTTTCGCGTAGAGCAAGTGAAACAAGC
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| Protein seq | MPRKKASSPSPTSTARETRSSSARGHASPTPTPTLRRSTRETTSRFSSSSSSSANKHEGSPAKQSANNNTAKRKMNNAAADTSTRPIKKNKKLNAKSYLALFSTPQQTAKSPPAPAPPLLVQVDDDNASTVPMQDSGTLLEHEEADTQEQGYQSGLHKVPEVVLEETDVSKNKADEHASTSEPLIPVDLCSNDNASESSHGMEVKEQTVGCSNPCFVTDLPNRPCSIVHHEEAKKTIEAGDPREIKGASTSNQALVTHSDGTDYNEYLCAVCRSRETPGILKSCDGKDCKNRYHDSCLDPPLQYVSLGIWLCTLCTKKRLQFGLFAVSEGIESLWDVKEGVQNNKQYFVKYKNLAHVHNQWLPESDIIRTPGGQDLINKFCKRIQKEKTIRWKQEWAEPHRLLKKRPLMSEKEAEEFFNSLGDKFAYCNVEWLVKWKDLGYEYATWELETSSFLCTPEAKDLKRNYESRHEDARRGFDPAKINKGKQCLFQKLQKLPDGFPPGLDKDHLSSLNRLREFWHNSDGAICLDDQERVIKTILFSMSILPDVCQPLLIVSTSASLSLWEAKFNRLAPSINVVVYNGEKDVRKQIQDLEFYENGLVTFQVLLSHPDAILEDIQTMESIVWEAVMVDDCQSLRVSKCLEQLKHLSTNFRMVLLSFPLKESIPEYINLLSFLNPEGSVISSSSNGDFTDTGDILATLKEKFARHVAFERKADSSKFLEYWVPARLSRVQLEMYCYTLLSNSPALRSHSRTDSVGALRDILVSLRKCCDHPYLVDQSLQSSLTKGHSLTDILDIGVCASGKLLLLDKMLQEIRNQGRRVLIVSQSGGGAGNPMGDILDDFVRQRFGFESYERVERGLLVPKKQTALNMFNDKTKGRFIFLIDSRACVPSIKLSSVDAIIIYCSDWNPTNDLRVLQRISIESQSECVPIFRLYSSCTVEEKTLILAKHDHILDSNVQNVMPIVSHSLLSWGASFLFNRLEEFQKHDYSSKDSEDDGLFMNNVFLEFAAKLSTNVEASTKMENAVISRAQQSGSFYSRDIAVISEREGISAVDGDLPKFWTFWSNLLGGRSPHWQYISEPVQRNRRKIQNMEDQMRIPAEETDEAIMKRRKIGEIMDSSPKILPVKDNDAVLPENSTASSSHETSVDDTWQELGAESLQGTQKGLHTQLKPELSKLYELLELPETVKCLCEELLDYILKNHQVSQEPKGILHAFNIALCWRAASLLKHKINRRESLALSVRNLNYECDEVLAEYVYEKLRILKKKFSRRASETS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.736968 | 2.011076 | 3.682944 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g01320 | RBH | 1.898349 | 1.389343 | 1.247085 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0102800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0000160 | RBH | 1.145485 | 6.060750 | 7.283742 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0000150 | RBH | 0.518117 | 3.795386 | 2.847040 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0000140 | RBH | 1.227793 | 7.957407 | 13.150293 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0000150 | RBH | 0.409712 | 0.192429 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0000120 | RBH | 8.812679 | 19.101110 | 18.557198 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0071500 | SBH | 23.1936675 | 64.8882635 | 67.2832315 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0000110 | RBH | 0.370727 | 0.410809 | 1.780377 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0001900 | RBH | 5.206071 | 16.8517935 | 19.2846755 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0000120 | RBH | 0.250319 | 0.333034 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0000120 | RBH | 0.595602 | 8.498400 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0000120 | RBH | 9.344927 | 12.820389 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0000120 | RBH | 0.984840 | 0.628066 | 1.374187 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0000110 | RBH | 0.506379 | 3.570841 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G000110 | RBH | 0.605815 | 4.269798 | 3.668285 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0000120 | RBH | 2.024516 | 14.410440 | 7.193273 |
