Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_05g0534900 | OGI:05071790 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr05:26560937-26566558 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | AGCGAATCTGGGGACTTTTGGGAGTGGTGTCTCTGACGAAGGTGGGCCCACATCTCTAGGCTCCAAACCCCTCTCGCCGCCGGCGACTATGCCCGTGGCGATCCCGTCCTCCTCCACCGCCGCCGCCGCCGCTGTCGCCCATCTCCGGCGACGCATCCACCGCCTCTCTTATGTCCCGGTCTCTCCCTCTGCTACTCCTCCATTCCGCGCTCGTCTCCAAGCCCGCACCATCTAGGCTCCTCTCTTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCATCGCCGCGGCCTCTTCTGGTGCCCGAGTCGGCGGGGGGCATGGGATCGTCTCCGCGGTGCTGGAGATCGTGGGCCCCATCGAGCTCCTCTTCCCGTCCTCCGAGGCGCGCCTCTACGTGCGCCTCCTGCGGCGCTGCGCGCGCGACGCTCTCGCCGCGGGCGCGGGCGCCGTCCACGGGCACGTCCTCAAGCGCGGCTTCGCATCCGTGTCGCTCGTGTCCAACGTCCTGATGGACACTTATGCCAAAGGCGGTCTCATGGCTGCCTGTCGCCACCTGTTCGACGAAATGCCGAACAAGGACATCGTGTCATGGTGTACCGTCATCGCGGCGCACGCCAGCCGCGGGCACTGCTTCGAGGCCATTGGGCTGTTCAAGGAACTCCTGTCTTCTGAGGTGAAGCCAAATCGGTTCGTCATCTCATCGGTGCTGAACGCCTGTGCTCGGTCTGGTGTCATAGAACAGGGGCTCATGGTTCATGGAATGGTGGTCAAGTCTGGATTGGGTGCTGATAGGTTTGTGGAGGTTGGATTCGTTGATATGTATGCGAAATGTGGCAATGTTGGCTATTCATTCAGGATGTTCAATGGAATTCCGGTGAAGAGCTCAGTTGCTTGGAATGCAATGATTTCAGGTTTTGTTGAGAATAACTGTTTCATGGATGCCGTGGAGCTTTGTCAGGATATGCATCGAGTTGGCATGGCAATGGATGTGGTGACATTGAGGGTAGTTGCTAGCGTCGCTGCTATTCTGGGAGCATTTGAGCTTTCTAGGAACATTCATGTTTATGCACTTAAAGCGGGGTTGGGAAGAGACTGTTTTGTTGTGTCTGAACTGATCAAGTCAGCTGGGAAGGCAGGTGAGACTCAGTACATCAAAAAGCTTGTTCCTGCAGTTAGAAGGCATGATGCGTCTTTGTATTCTTTGGCAATCTCAGGTTATCACTCAAATGGTTGTCAGGGTGAAGCTGTGAAACTCGCAGAGGTTCTTCTTTATTCGGGTCTCAATTTAAGGGAAGGGGATTTGGTTACTGTGATAAATATCTGTCAGACCAAAGAGGAAGTTCAACAGATGCATGCTTATACTTTCAGAACTGGGGATTTATCTTATACTAATGTTTGCAATTCTCTTATATCGATATACTCTGAAATTGGATCGTTGATTCACGCGGAATCAATCTTTAAAACTATGCAATCCCGAGATGTCATATCATGGACTGCAGTCATGGCAGGCTGTGTCAAGAACCTACAATATGAAAGAGCATTTGGTTATTTTTTAGAGTTAAGAAACTCTGGAGAACCATTAGATCAGCACTGTGTTGCTAATCTAATAAATGCCTGTACAGGACTTGAAGACATGTACAAGGGAAAGCAGATTCACTCTTTAGCTCTTAAACTTGGGCTACTTGTTGATTTCATCAGTGCATCCCTAGTAAACATGTATGCAAAATGCCATCACATTGAGTGGGCTTCTCAGTTATTCTCTAGCACATTATTTCCACGAAATCTAGTGATAATCAATGCCATGATCTCTGGATATTGCTGGAATTCACTGCCACAGAAAGCTCTTCTACTCTTCTGCAGAGAATATCGTTCTGGTCTGCGTCCTGATCATTTCACCTTCTCAACTGTTCTTGGGGCATGTGCTGATATAGGAGCAAAGGAGGCTGGTGAGCAAATCCATGGCCATCTTGTGAAGATTGGTTCTGAATACTTGGATGTTGTTGTTGGAAACTCTATCATAAACTTTTATGTCAAGTGTGGGTGCATTGCTAATGCTTGTAGGTTTTTCCATAGCATGAGGAGTCGAAACATCAATTCATATGCAATGTTGATGTTGGGTTATATTCAAAATAGATGCAGTGATGAAGCTCTTCAATTTTTCTCCATGATGCAACAGAGTGGGTTGCGTGCAAACCGTGTTACCTTTGCAAGAATCTTGAGGGGGTGTGCTGATCTTTGTGCTATTCATTTGGGAAGGCAACTGCATGCTTCCATTATAAAAATGGGCCTGATTTCTGATGTATATGTGGCAAATGCACTTGTAGGAATGTATAAAAAATCTGAAGGTTGGGTGGAATCAAAAAGAAATTCTAAAGAAACTTTGGCTCCAGAACAGGATGCCGAAGATAATTGCTATTCAGAACAAAGAGATATAAGAAGCACACTTGAAGAAATTGGATTATTCACATTGGAAGAAGAGAAAGACAAAGAAACTTTTGCTGATGAGCGGAAGGTCTACACTAGTGCTGCTTCTGTGTTTGGACGTGATCTTAGGACCGATTCTATCATTGGGAATTGGAAGAATGGCAGGTGCAATGAAAGCGGGCATTTGCTAAATTACAAGAGTGCAGAATATCAGGAAATTGGAGGTGAACCTTTTAAGTTGTTTGCATTGTTACAGGAGGATAGCAGAAGATCTGACAAATTTGTCCTGCTGGTCATCACTGATAATAGTCACTTAAAGACGAAGGGTGCAGGTTTTATTAATGCAGAACTAGCGAGACGACCTGGTTTTGCACCAGCACTTGACTTTCCTCCTTGACAAACTATAGTGCAGTATGAGAACTACCGGATCCATATTATGCAGCAAATCTGAATTGTCATGTTTACATATTGGAAACACATGCAAGAAAACAAACTATGAGTTTGCCTCATAGTTGCATCAGTAATCCCCCCAAATCAATCATTGAATCTATGAATTTCACACGGTGCACTTCCTGGGACCATCCAACTCAGTCTCTCTCTGCATTTACATAAATGATGTTTACAGCATCTTTAAGCAAACCAAATTCTGCTATGAAGTTTTTTCAAATGTTGGATGGCCTAGGTGCATGCAGGATAGATCAAGGATGTTAACCAGGTTAGAATAAAATTCTAGTATATTTTATTTTAGTGGTACTTGATTCCAGTTTTTTAGTATTGTGAACAAGCCATTCAGGCAGTTTCTTTCATGCAGGGATGCCTACTCTTCAAATATTCCAAAGAGAGGGGAAGTAGTCTGGGAAAAATCAGCTTAAGTTTTGATCACTGATGTGAGTTAATGAACTTGAGCTTTAGACCTTTGACAGTGCTTGAACAGCTTTTACCAATACCTTGTATAGTGTAAAAAATACTTTACCTGGTTGTCATAACTTCAATGTGTGAAAATAGAAATTAGTTTTTCGGACAGTTATTTTGGATGATTTCATGCACTTCATTGGTATAATTATGGAGCTAACAAAGCTGAAAAGCAAACCAACCAATTATTTCCCACAAGAGTGCACACTTATTTGACTCTTGAATCTCTTTCTGTTTCCCATTTTTCAAAATCAAGGCTATGTTTTACATGCTCAGACCTATCTAGACTTGCCCTTGGTCAGTCTCTACCATGTTCCTGGTGTCCATACCTAGATATATTTTTCCTTTTTAATGAAATGATAAGATACTGGTTTGATATAGCTATCTGTCACTGACATTGTTGAAGACCATACGTTTGACGCTACCACCTAGTAGTTGCAGGTTCAGGGTGTGTTCGGCCGGCCAACTACAGCGGCTGTGCAGCACTGCTGCTGCAGTGACTACAGTAGAAATTGTATATTGCTACCGTAGCTGCTGGCTGCCATCTAGTCACACCGAACAGGGCCCTCAATCTCAGGCAAACTGGAATAACAAAGGCTTTATGTAGACTAAATATTCTAAATTAATTCTGTTAATATTTGTGCTATTACATAAAAATATAAATGATTGCTATTTTGAGGCTTGCAAGGCTATCACATCTAACGGAATGCTTTATTTCTAGCTTAGCTCATTTATGTTTCCTTCTGACAGGTACTAATTACACTTGAATGAAATGAGTGCTACAGAGGGTGTGTTTAGTTCACGCTAAAATTGAAAGTTTGGTTGAAATTGGAACGATTTGACGGAAAAGTTGGACGTTTGTGTGTGTAGGAAAGTTTTGATGTGATGGAAAAGGTTGGAAGTTTGAAGAAAAAGTTTGGAACTAAACAAGGGCAGAGTACAGAAGAAATTCCAAGGATATGTATTCTTTTTTTTCGTGATTCTGCCCATCGTCTGAAGGTGAGATTGTAAGTGTTGTGCTGCTGTTGGCCTTTTTCCAGTAGTATCTCCTCTGTAGACTCCCCTATAGCAGTATCTCCTCTGTAAATTCTCTCTTGTTGAAAAGTTTATATCCTTGCTAATGACACTGCCAGCATTTGCATTGCCAGATTGTTTTGCTATATAGTATTAGATGTGTTCTATAGTGGCTTCTGATCTGCAGATCCAAAAACCTTTTATTTACAAGTTTTGCAGCTTAAAGTAACATTCGTTGAATTATGGTGATGTGACACTTTTCATTTGTAAACCAATCTCAGTGTTATTTAGTGGGACAAACAACCAGTTGAGCATCTTTTTAAATAAACAAAAAAAAATCATATGCTGATACTTTTTTTTTCCTTGATCATCAGGGTCTGACGAAGATACAAGCTAAAGCAGCGCCATCCAGTGAAACAACACCGTTTCCTTTTCTGTATGTCTGGAGCAAGAAGTATCAAACTGTTTTCCTTTCATATAATCTTTACTCCTGCGCACCTTATTTTTTGGCTGGTGCGACATGAAATATACTGATACTAACTTGATACTAACTTGAAGCCATTAGTTGTCCATAACTCCATATAGAACCTGAGCTAGAGGCTAAAGCCTAGAGGTTTAGTGACTTCTGTACGAGGTACCATACGGTATATCCTGGATTCATTCCATGTTCAGCTGTAGGATATCCTTCAGAAATTAGTTCGACCAATAATGCTGGGATCTCCCATTTATCAGTCACCAATCCTGCTAACCCAGGTTAGTCTTCTTTCTCATCAGAACTTGGTACACGTCTAACTGATTTTTTCTGCAATATTCGTTTCTCTTAATCTTTTCCTGATGCCAATAAATCTCTAGCAGAAATTCCTTCGGCTGCTACTTTCATCATCCATCGACATTAGAAAAAGGCAGATCCATCAGGACGTGCATTTGACAATTTGGCCCTGCTTCAGGCTGAAACTGATTGGTCCCATCAACTTGATGAGGTTATGAAATTTCAAGATGTGATCCTGAACAAGATTGGGACATCAAACTTCTGTAGCATTACATCCAACAGGAGCTATCAACTACCAAGTGACTTTTTTTTTTTTTTGCCACCATCAGTTCAGTGGAGTAGAGGAGTCCGCCTCATGCAGATGTTATCTTACTGTAGTTATACTGATTTTAAGTTGCCAATTTTGCCACATCTTAACTACCATGCTGTAGACTACTATGAAGTCTGGACACCCCGGCAACTTCAATTTTGCTGTAATGACAAGAGGAGCCCTGCGTTTCATGTG
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| CDS seq | ATGTCCCGGTCTCTCCCTCTGCTACTCCTCCATTCCGCGCTCGTCTCCAAGCCCGCACCATCTAGGCTCCTCTCTTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCATCGCCGCGGCCTCTTCTGGTGCCCGAGTCGGCGGGGGGCATGGGATCGTCTCCGCGGTGCTGGAGATCGTGGGCCCCATCGAGCTCCTCTTCCCGTCCTCCGAGGCGCGCCTCTACGTGCGCCTCCTGCGGCGCTGCGCGCGCGACGCTCTCGCCGCGGGCGCGGGCGCCGTCCACGGGCACGTCCTCAAGCGCGGCTTCGCATCCGTGTCGCTCGTGTCCAACGTCCTGATGGACACTTATGCCAAAGGCGGTCTCATGGCTGCCTGTCGCCACCTGTTCGACGAAATGCCGAACAAGGACATCGTGTCATGGTGTACCGTCATCGCGGCGCACGCCAGCCGCGGGCACTGCTTCGAGGCCATTGGGCTGTTCAAGGAACTCCTGTCTTCTGAGGTGAAGCCAAATCGGTTCGTCATCTCATCGGTGCTGAACGCCTGTGCTCGGTCTGGTGTCATAGAACAGGGGCTCATGGTTCATGGAATGGTGGTCAAGTCTGGATTGGGTGCTGATAGGTTTGTGGAGGTTGGATTCGTTGATATGTATGCGAAATGTGGCAATGTTGGCTATTCATTCAGGATGTTCAATGGAATTCCGGTGAAGAGCTCAGTTGCTTGGAATGCAATGATTTCAGGTTTTGTTGAGAATAACTGTTTCATGGATGCCGTGGAGCTTTGTCAGGATATGCATCGAGTTGGCATGGCAATGGATGTGGTGACATTGAGGGTAGTTGCTAGCGTCGCTGCTATTCTGGGAGCATTTGAGCTTTCTAGGAACATTCATGTTTATGCACTTAAAGCGGGGTTGGGAAGAGACTGTTTTGTTGTGTCTGAACTGATCAAGTCAGCTGGGAAGGCAGGTGAGACTCAGTACATCAAAAAGCTTGTTCCTGCAGTTAGAAGGCATGATGCGTCTTTGTATTCTTTGGCAATCTCAGGTTATCACTCAAATGGTTGTCAGGGTGAAGCTGTGAAACTCGCAGAGGTTCTTCTTTATTCGGGTCTCAATTTAAGGGAAGGGGATTTGGTTACTGTGATAAATATCTGTCAGACCAAAGAGGAAGTTCAACAGATGCATGCTTATACTTTCAGAACTGGGGATTTATCTTATACTAATGTTTGCAATTCTCTTATATCGATATACTCTGAAATTGGATCGTTGATTCACGCGGAATCAATCTTTAAAACTATGCAATCCCGAGATGTCATATCATGGACTGCAGTCATGGCAGGCTGTGTCAAGAACCTACAATATGAAAGAGCATTTGGTTATTTTTTAGAGTTAAGAAACTCTGGAGAACCATTAGATCAGCACTGTGTTGCTAATCTAATAAATGCCTGTACAGGACTTGAAGACATGTACAAGGGAAAGCAGATTCACTCTTTAGCTCTTAAACTTGGGCTACTTGTTGATTTCATCAGTGCATCCCTAGTAAACATGTATGCAAAATGCCATCACATTGAGTGGGCTTCTCAGTTATTCTCTAGCACATTATTTCCACGAAATCTAGTGATAATCAATGCCATGATCTCTGGATATTGCTGGAATTCACTGCCACAGAAAGCTCTTCTACTCTTCTGCAGAGAATATCGTTCTGGTCTGCGTCCTGATCATTTCACCTTCTCAACTGTTCTTGGGGCATGTGCTGATATAGGAGCAAAGGAGGCTGGTGAGCAAATCCATGGCCATCTTGTGAAGATTGGTTCTGAATACTTGGATGTTGTTGTTGGAAACTCTATCATAAACTTTTATGTCAAGTGTGGGTGCATTGCTAATGCTTGTAGGTTTTTCCATAGCATGAGGAGTCGAAACATCAATTCATATGCAATGTTGATGTTGGGTTATATTCAAAATAGATGCAGTGATGAAGCTCTTCAATTTTTCTCCATGATGCAACAGAGTGGGTTGCGTGCAAACCGTGTTACCTTTGCAAGAATCTTGAGGGGGTGTGCTGATCTTTGTGCTATTCATTTGGGAAGGCAACTGCATGCTTCCATTATAAAAATGGGCCTGATTTCTGATGTATATGTGGCAAATGCACTTGTAGGAATGTATAAAAAATCTGAAGGTTGGGTGGAATCAAAAAGAAATTCTAAAGAAACTTTGGCTCCAGAACAGGATGCCGAAGATAATTGCTATTCAGAACAAAGAGATATAAGAAGCACACTTGAAGAAATTGGATTATTCACATTGGAAGAAGAGAAAGACAAAGAAACTTTTGCTGATGAGCGGAAGGTCTACACTAGTGCTGCTTCTGTGTTTGGACGTGATCTTAGGACCGATTCTATCATTGGGAATTGGAAGAATGGCAGGTGCAATGAAAGCGGGCATTTGCTAAATTACAAGAGTGCAGAATATCAGGAAATTGGAGGTGAACCTTTTAAGTTGTTTGCATTGTTACAGGAGGATAGCAGAAGATCTGACAAATTTGTCCTGCTGGTCATCACTGATAATAGTCACTTAAAGACGAAGGGTGCAGGTTTTATTAATGCAGAACTAGCGAGACGACCTGGTTTTGCACCAGCACTTGACTTTCCTCCTTGA
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| Protein seq | MSRSLPLLLLHSALVSKPAPSRLLSSSSSSAAAAAIAAASSGARVGGGHGIVSAVLEIVGPIELLFPSSEARLYVRLLRRCARDALAAGAGAVHGHVLKRGFASVSLVSNVLMDTYAKGGLMAACRHLFDEMPNKDIVSWCTVIAAHASRGHCFEAIGLFKELLSSEVKPNRFVISSVLNACARSGVIEQGLMVHGMVVKSGLGADRFVEVGFVDMYAKCGNVGYSFRMFNGIPVKSSVAWNAMISGFVENNCFMDAVELCQDMHRVGMAMDVVTLRVVASVAAILGAFELSRNIHVYALKAGLGRDCFVVSELIKSAGKAGETQYIKKLVPAVRRHDASLYSLAISGYHSNGCQGEAVKLAEVLLYSGLNLREGDLVTVINICQTKEEVQQMHAYTFRTGDLSYTNVCNSLISIYSEIGSLIHAESIFKTMQSRDVISWTAVMAGCVKNLQYERAFGYFLELRNSGEPLDQHCVANLINACTGLEDMYKGKQIHSLALKLGLLVDFISASLVNMYAKCHHIEWASQLFSSTLFPRNLVIINAMISGYCWNSLPQKALLLFCREYRSGLRPDHFTFSTVLGACADIGAKEAGEQIHGHLVKIGSEYLDVVVGNSIINFYVKCGCIANACRFFHSMRSRNINSYAMLMLGYIQNRCSDEALQFFSMMQQSGLRANRVTFARILRGCADLCAIHLGRQLHASIIKMGLISDVYVANALVGMYKKSEGWVESKRNSKETLAPEQDAEDNCYSEQRDIRSTLEEIGLFTLEEEKDKETFADERKVYTSAASVFGRDLRTDSIIGNWKNGRCNESGHLLNYKSAEYQEIGGEPFKLFALLQEDSRRSDKFVLLVITDNSHLKTKGAGFINAELARRPGFAPALDFPP |
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| Function | Pentatricopeptide repeat-containing protein At4g39530 [UniProtKB/Swiss-Prot:Q9SVA5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_05g0534900 | OsNip_05t0534900-01 | Chr05 | 26560937 | 26566558 | + | RAP2018-11-26 | ||
| CDS seq | ATGTCCCGGTCTCTCCCTCTGCTACTCCTCCATTCCGCGCTCGTCTCCAAGCCCGCACCATCTAGGCTCCTCTCTTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCATCGCCGCGGCCTCTTCTGGTGCCCGAGTCGGCGGGGGGCATGGGATCGTCTCCGCGGTGCTGGAGATCGTGGGCCCCATCGAGCTCCTCTTCCCGTCCTCCGAGGCGCGCCTCTACGTGCGCCTCCTGCGGCGCTGCGCGCGCGACGCTCTCGCCGCGGGCGCGGGCGCCGTCCACGGGCACGTCCTCAAGCGCGGCTTCGCATCCGTGTCGCTCGTGTCCAACGTCCTGATGGACACTTATGCCAAAGGCGGTCTCATGGCTGCCTGTCGCCACCTGTTCGACGAAATGCCGAACAAGGACATCGTGTCATGGTGTACCGTCATCGCGGCGCACGCCAGCCGCGGGCACTGCTTCGAGGCCATTGGGCTGTTCAAGGAACTCCTGTCTTCTGAGGTGAAGCCAAATCGGTTCGTCATCTCATCGGTGCTGAACGCCTGTGCTCGGTCTGGTGTCATAGAACAGGGGCTCATGGTTCATGGAATGGTGGTCAAGTCTGGATTGGGTGCTGATAGGTTTGTGGAGGTTGGATTCGTTGATATGTATGCGAAATGTGGCAATGTTGGCTATTCATTCAGGATGTTCAATGGAATTCCGGTGAAGAGCTCAGTTGCTTGGAATGCAATGATTTCAGGTTTTGTTGAGAATAACTGTTTCATGGATGCCGTGGAGCTTTGTCAGGATATGCATCGAGTTGGCATGGCAATGGATGTGGTGACATTGAGGGTAGTTGCTAGCGTCGCTGCTATTCTGGGAGCATTTGAGCTTTCTAGGAACATTCATGTTTATGCACTTAAAGCGGGGTTGGGAAGAGACTGTTTTGTTGTGTCTGAACTGATCAAGTCAGCTGGGAAGGCAGGTGAGACTCAGTACATCAAAAAGCTTGTTCCTGCAGTTAGAAGGCATGATGCGTCTTTGTATTCTTTGGCAATCTCAGGTTATCACTCAAATGGTTGTCAGGGTGAAGCTGTGAAACTCGCAGAGGTTCTTCTTTATTCGGGTCTCAATTTAAGGGAAGGGGATTTGGTTACTGTGATAAATATCTGTCAGACCAAAGAGGAAGTTCAACAGATGCATGCTTATACTTTCAGAACTGGGGATTTATCTTATACTAATGTTTGCAATTCTCTTATATCGATATACTCTGAAATTGGATCGTTGATTCACGCGGAATCAATCTTTAAAACTATGCAATCCCGAGATGTCATATCATGGACTGCAGTCATGGCAGGCTGTGTCAAGAACCTACAATATGAAAGAGCATTTGGTTATTTTTTAGAGTTAAGAAACTCTGGAGAACCATTAGATCAGCACTGTGTTGCTAATCTAATAAATGCCTGTACAGGACTTGAAGACATGTACAAGGGAAAGCAGATTCACTCTTTAGCTCTTAAACTTGGGCTACTTGTTGATTTCATCAGTGCATCCCTAGTAAACATGTATGCAAAATGCCATCACATTGAGTGGGCTTCTCAGTTATTCTCTAGCACATTATTTCCACGAAATCTAGTGATAATCAATGCCATGATCTCTGGATATTGCTGGAATTCACTGCCACAGAAAGCTCTTCTACTCTTCTGCAGAGAATATCGTTCTGGTCTGCGTCCTGATCATTTCACCTTCTCAACTGTTCTTGGGGCATGTGCTGATATAGGAGCAAAGGAGGCTGGTGAGCAAATCCATGGCCATCTTGTGAAGATTGGTTCTGAATACTTGGATGTTGTTGTTGGAAACTCTATCATAAACTTTTATGTCAAGTGTGGGTGCATTGCTAATGCTTGTAGGTTTTTCCATAGCATGAGGAGTCGAAACATCAATTCATATGCAATGTTGATGTTGGGTTATATTCAAAATAGATGCAGTGATGAAGCTCTTCAATTTTTCTCCATGATGCAACAGAGTGGGTTGCGTGCAAACCGTGTTACCTTTGCAAGAATCTTGAGGGGGTGTGCTGATCTTTGTGCTATTCATTTGGGAAGGCAACTGCATGCTTCCATTATAAAAATGGGCCTGATTTCTGATGTATATGTGGCAAATGCACTTGTAGGAATGTATAAAAAATCTGAAGGTTGGGTGGAATCAAAAAGAAATTCTAAAGAAACTTTGGCTCCAGAACAGGATGCCGAAGATAATTGCTATTCAGAACAAAGAGATATAAGAAGCACACTTGAAGAAATTGGATTATTCACATTGGAAGAAGAGAAAGACAAAGAAACTTTTGCTGATGAGCGGAAGGTCTACACTAGTGCTGCTTCTGTGTTTGGACGTGATCTTAGGACCGATTCTATCATTGGGAATTGGAAGAATGGCAGGTGCAATGAAAGCGGGCATTTGCTAAATTACAAGAGTGCAGAATATCAGGAAATTGGAGGTGAACCTTTTAAGTTGTTTGCATTGTTACAGGAGGATAGCAGAAGATCTGACAAATTTGTCCTGCTGGTCATCACTGATAATAGTCACTTAAAGACGAAGGGTGCAGGTTTTATTAATGCAGAACTAGCGAGACGACCTGGTTTTGCACCAGCACTTGACTTTCCTCCTTGA
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| Protein seq | MSRSLPLLLLHSALVSKPAPSRLLSSSSSSAAAAAIAAASSGARVGGGHGIVSAVLEIVGPIELLFPSSEARLYVRLLRRCARDALAAGAGAVHGHVLKRGFASVSLVSNVLMDTYAKGGLMAACRHLFDEMPNKDIVSWCTVIAAHASRGHCFEAIGLFKELLSSEVKPNRFVISSVLNACARSGVIEQGLMVHGMVVKSGLGADRFVEVGFVDMYAKCGNVGYSFRMFNGIPVKSSVAWNAMISGFVENNCFMDAVELCQDMHRVGMAMDVVTLRVVASVAAILGAFELSRNIHVYALKAGLGRDCFVVSELIKSAGKAGETQYIKKLVPAVRRHDASLYSLAISGYHSNGCQGEAVKLAEVLLYSGLNLREGDLVTVINICQTKEEVQQMHAYTFRTGDLSYTNVCNSLISIYSEIGSLIHAESIFKTMQSRDVISWTAVMAGCVKNLQYERAFGYFLELRNSGEPLDQHCVANLINACTGLEDMYKGKQIHSLALKLGLLVDFISASLVNMYAKCHHIEWASQLFSSTLFPRNLVIINAMISGYCWNSLPQKALLLFCREYRSGLRPDHFTFSTVLGACADIGAKEAGEQIHGHLVKIGSEYLDVVVGNSIINFYVKCGCIANACRFFHSMRSRNINSYAMLMLGYIQNRCSDEALQFFSMMQQSGLRANRVTFARILRGCADLCAIHLGRQLHASIIKMGLISDVYVANALVGMYKKSEGWVESKRNSKETLAPEQDAEDNCYSEQRDIRSTLEEIGLFTLEEEKDKETFADERKVYTSAASVFGRDLRTDSIIGNWKNGRCNESGHLLNYKSAEYQEIGGEPFKLFALLQEDSRRSDKFVLLVITDNSHLKTKGAGFINAELARRPGFAPALDFPP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.669848 | 0.164881 | 0.647900 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0715700 | RBH | 0.127735 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g45850 | RBH | 0.445886 | 0.109158 | 0.164168 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0534900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0024900 | RBH | 0.291609 | 8.777633 | 4.031924 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0024700 | RBH | 0.086373 | 2.437443 | 0.917933 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0024700 | RBH | 0.602260 | 1.873752 | 5.527420 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0024710 | RBH | 0.003011 | 0.083511 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0024740 | RBH | 4.759882 | 20.757156 | 8.871072 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0412300 | RBH | 1.244715 | 3.3755625 | 3.041694 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0024320 | RBH | 0.084323 | 0.170266 | 0.353596 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0423400 | RBH | 1.1951555 | 2.955468 | 8.516805 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0024530 | RBH | 0.163348 | 0.172455 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0024400 | RBH | 0.031878 | 2.140305 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0024590 | RBH | 0.417237 | 2.236707 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0024590 | RBH | 0.261177 | 0.264336 | 0.277046 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0024640 | RBH | 0.064233 | 3.114117 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G024080 | RBH | 0.111076 | 0.315064 | 0.502789 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0024530 | RBH | 0.168348 | 0.412675 | 1.608412 |
