Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_05g0515400 | OGI:05069070 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr05:25555850-25561791 | ||||||||
| Gene Symbol | ARF14, OsARF14, OsETT4, ETT4, DLN153, OsDLN153 | ||||||||||
| DNA seq | CCTTCCTCCTCCCTGTGCGGGAACAGTGGCTACCAAAAGCGGCAGAAGCCGCGGCAAGGCAAGGCCCCCGGCCCCGCCACGCCACGGTGGTGGAGCCCGGAGCCCCCCCTCCTTCTCCCTCCTCCTCTCGTCGCTTCCGCCTTGGCTCGTCTTGTGCCTACGCGAGAGCCAGAGATTGGGGGGGAAGGTTGCATTCATTGATGCCGCCGCGGCGCCGCTGCTGCTTTTAACGCGCTCGTCGTCGGCGTCGTCGGCTGCCCTCCACCGCAATCAAGGCCAATTTGGCGCGCGGCGAGGAGGAGGAGGGAGGAGGAGATGGGGATTGACCTGAACACGGTGGAGGAGGAAGCGGAGGAGGGGGCGGCGGCGGCGGTGTGCGGGGAGCTGTGGCACGCGTGCGCGGGGCCAGGGGTGGCGCTGCCGCGGCGCGGCAGCGCGCTCGTGTACCTGCCGCAGGCGCACCTCGCCGCGGACGGCGGCGGCGGCGAGGTGCCGCCTGCCGGCGCCGCGGCCGTGCCCCCGCACGTCGCGTGCCGCGTCGTCGGCGTCGAGCTGCGCGTGAGTGATACTGACCTACCTCCGGCTCCTCCTCCCCTCGCCGAGAAAGAAGTAGTATTCTGATGGCGTCTCGTGGTGCGCGTGCAGGCGGACGCGGCGACGGACGAGGTGTACGCGCGGCTCGCGTTGGTGGCGGAGGGCGAGGTGAGCAAATGCAGCTTGGATTTCTCGCGCCGTCTCTACTTTCTCGCGCGATCGAGTTCAGTTCTAGAGAATGGGGGGAGAAGTGGAAGCAGTTAACTTGTTTACTCTTTTTGGTAGTTGTCTGATTGAGTTGTAGAGAGCGAGAGGCTTGTGCTGCTCCCGTTTCTAATTGGGGGATCTTGGGGTTGGAGAGTAGTCAGATAGAGACTGTTCCATTAAAATTGTTTCCCTGTTTCATTTTACATTTCGCATTTTGGCTTTACATTTTGGATACATTGTTAGGACATTGGAGACGTCACTTGCTTAGGATGTTGTACGGTATATGAATGCAGCTCTCCTTCTATATCAGTCAGATTTGATGGCTGTTGAAACTTGAAAGTAAGGAAAATTTGGATGCACTGGCAGGACACTGGAGACATATCTTTCTTTTGCACCTAGTTGCTTTGCTTAGGATGTTAATGTGTTATACAGTACTAGTATATGGTGAATGCAGCTCTCCTTCTATATTAGTAAGCTTTGATGTCTCCATGGTCTGTAGGTGTGTTGAAAGCAAGGGAAATGTAATTAGATGGTAAGTGTTCCTAACACTGTTGTTCTATTGAACTCAGATGTTGCAGCGGAACTTCCGCGAGGGTGGAGGTGAAGATGGTGCAGGGGAGATGGAGGGTTGTGATGCAGAAAAGAAGCCCCGGATGCCACACATGTTCTGCAAAACTCTCACAGCATCTGATACAAGCACCCATGGAGGTTTCTCTGTTCCTCGCCGGGCTGCAGAGGACTGTTTCCCACCTTTGGTGATACACTTAAAAGAAAAACTTGTAACTTTTAATGTAACTGCTAAAATTCTGATATAGTCACTTGCATTGCTGCTCTAACCAGCTGTAGTTCTTCAATTCTTTGTAGGACTATAAGACAGTTAGACCTTCTCAAGAGCTGATTGCCGTGGACTTACATGGCACACAATGGAAGTTCAGGCATATTTATAGAGGTGCACGATTGGAACACATTTGTTTTAGATTTTGTGCTGTTGTCTTGTATACAATACACATGTCCGCTGTGTTTACTTGGAGAATTTAAACCACAATAGAGAACTTGGTATGCTCACTGCTTGTGCTTGTTTAAGGCCAAAAAGGAGGGTTCAAAAAAGATGTCTAGTGGTGGTAGATTTGGATAGGATGGACTAAGAAGGGGCTGCATTTCTAAAGTAGAAAACTATTGTAGTTGTGTCTGGATCATGAAGGAAAGTTGCCAATCCAATATACTAAAAGGAGAAATATTTTTTTCTATTACTTGGTAGTACGGAATTTGGAACATGTGTGTCCTTCTATGTTTGCTAATTTGATAGTATGAAATGAGGAATCTTTCTGGACTTGGTTGCTGAAGTGAGCTAAGAATTTGCAAAGGCGTTAAAGCACTTCGTAGTATTGAGGACTCATTGGATTGATTAGAGGCTCAAAGTTAACTAGCTAAGGTTAACATAATAAGTAAGGTGGATGTAATTTATTGTGCTGGAGGATCAGGTTTGTAATATGGCGTTTTTTACCTATTGCTGGCCACGAGTCTTGAAAATCTGTGTAAAGCAGTGTGAAATTTATAGATGATTTAAGCATCAGCACAACTAATTTCCTTCTTCAGATGTGCTACCACTTTTCTGGTTTTCACTATAAATCTATGCATTGCAGCATTTTTCTTCTCATTTACGTGAACTCTCAGTTTAATTGTGACGTGGAAAAAAAAACTTCTTGAATTTCAGGCCAGCCTCGTAGGCATCTTCTAACGATTGGATGGAGCTCATTTGTCAATAGGAAAAAACTAGTCTCAGGGGATGCTGTCTTGTTTCTTAGGTAAGCATATCATCTATCTAAGTGATGAAGTTAACTTCCTTTTGTCATTTGTCCTTTTTCATAAGCTTCAATTGTTATTTTTATACAGAGGTGATGATGGCCAACTAAGATTGGGTGTAAGGAGAGCAGTTCAACTTAGAAATGAGGCCCTCTTTGAACCTGTCAACAGCAGCGATTCAAAGCTACGCATTCTATCTTCTGTTGCCAGTTCCTTGGAAAATAAAAGTGTTTTCCACATTTGTTTCAACCCAAGGTTTGTGCAGACAAGTGCAAAATTTCAAGTTCCAGTTAATCACTGTTATGCTTGCATGGATAGTTAAAAGTCATAAAACTCCCTTCACAATTATGTAATCCTTTAGGGTTGTTCTTTTTCTTCCTTTACCTGATCATATATGGTAGTATGGTACATGAAACTTATACAAGAAAATGCCTTTTTAATGTAACTCTGGCATAGCTTGAGTGACTTGAAAGTAATTTCGGGTTTTCTATTCTCCCACAGGAGTGGTGCGTCAGAATTCATTGTACCGTATTGGAGATTATTGAAGAGCCTGAACCATCCATTTTCCATTGGAATGAGGTTCAGAGTTTGCTATGAGAGTGAAGATGCTAATGAGAGGTCTGCACTTTTAAGTCAACCAAATGGTATTAGTCTATCTCAAATCTCATGAAGTTACATTTTTGCTGTGCAGGTCCGCTGGATTAATTTCAGGCATTAGTGAAGTTGACCCCATAAGATGGCCTGGATCAAGATGGAAATGCCTACTGGTATGCATTTGAGATTGAGAATATCATACTTGTTTTCTGACTTGAGAGTTTTAGCTTATTCACTGAGTGCTAAGTTTGAATTTATTATTCGTTTTGAAAGTCAATTGTTTTAAAAAGATTCACTGCTTTTCTGATACTTTGTTCTGCTTTGATTCACTGCTAGCACCTGCTAAGCTCTGTCAAATATTAGACGTTTCAACTCCTGGCAACGTCTGTCAGAAGTAGGGGTGGGCATAAATCTCCCGAAAACCAACCACCGCACTGAACCGAACCAAACCGAAGTATCTTTTTTTGGGTGTTCAGATGATTGTGGTTATTGTTTTGATCTACTTTGGTGGTCGGTCTGTTCTCCGGTTTCCGCCTGCTGTGAACAGAACGCACTGAAGAAACCTGAAGTCCTCATGTGCGTTGTCGTCTAGGCATAACTGCCTCCTTGTTTCGTGCTATCTGGGAACATGAGCGTGATGCTCCGTTCTTTTGTGGATGGACGGTGGAGCCCATGGCCTTCCTGCGCTGTGTGCAATGCGTGCATGGCATGAGCCCACCTCTTGCTTCATGTGATTGGTACTTAGAGGGAGGAATAATGGAGGCATATGTTTCTTCGGTAAAAAACGGTGCCCCGAAAAAACCAAATCAAATTTGTTCAGTCTTTTTCCATCGGTTTTTATTTTGTTTGCACGTTCTTCGGTTGCTATTTTACGAAAACCGAACATTTTGAAAACCGATAAAACCGACCCGATTAAACTGGTGAAACCGAATGCCCACCCATAGTCAGAAGTAAGATGGATCTAAGAATCGCAAAATCATTCATTTTATGACTGCTCAAATCTCGAGTATGCAAGTAAGATCCTTTTCCCGAAGTAACATGTGGAGAAGAGTTGCCAATGGCCAAACCTGTATCTTATTTGTTACGTACACTTTTAGAGTCTAAAATGGAAAATGACACATAGTCAAAGTTTCCTTCTGTTTTGTGTCATGGAAGTTGATTTGAATCTGTAAAAAGCTTATGGTGCATTGTTTATGGCTACTCTGGCTTAGGTGCCCATAAATCTTTGATGAAGTGATGTGCTTCTCTGTTTGCATTTTTACAGGTAAGATGGGATGATAGTACAGATAGCAGCCACCAAAACAGAGTTTCTCCATGGGAGATCGAGAGAGTTGGTGGCAGTGTCTCGGTTACCCATTCCTTGTCATCTGGGTCTAAGCGAACCAAATTGCACTTTCCTCAAGGCAGTTTGGATACTCCATTTCTTAGTAGGTTCCACAGTCCCAACAGTACTATATATATAATTTCATTTACTCATGCATGTTAACTAATTTGCATTAAACTTGTAGATGGAAATGGTCACCCGGACTCCATGGGAACTGAAAATTTCCACAGGGTCTTGCAAGGTCAAGAATTTAGGGGTTCTAGGTCCCATGGTGTTGTATGCTCTGAATCACCTGGTGTACCAAACTTTCAATCTCCTGACAATAGGAGATTTTCTGCTGATATGCGGGGCTACATGATGCCAGCAAGTGGGCCCCCACAGCGGAACACAGAGTTTACTTATCAGCCCATAGGCTTCAGTGAGTCTCTTGGATTCCCAGAGGTCTTGCAAGGTCAAGAAATGTCACAAGTAGTTCCTTTGTTCCGAGGAGCTACTTTTGGCGCTCGTACACAGAATGACAGAGTTGTCTCTGCTAATTCTGTGCATAGATCAGCTGCACAGAGTGGATTGCTAGCTTCAACTCTAGGGCATCCCATCTCGCAGTTTACTCTGTCATCGTCAAAGGTATCTTCTCCCTCGTCGGTTCTGATGTTTAACCAAGCGACAGCTCCAAATCATGAAACAGTAAGCGGAACCAACAACAAAGGTATGCATGTCAGCCAGTTTGCTTCCCAGGAGATGCTCTCAGAAACTGTAACCTGGCCCGGCACACAACGTCAAACGCCGAGCGAAATCACGAGCAACCAGTTCGCCCTGGCGAGAATCCCAGCTCCTCCAAGCGGAGCTGAATCCGGATTGCCCAAGAGGGATGCCGGGAGAAGCAGCTGCAGACTGTTTGGCTTCTCCCTGACAGGCAACATGCTGGGAGAAGATGGAGAAGGCCTAGATGATGGAGCCATTGAAGCTGGTTGCGAAAACCCGCCCGTGCTGGAGCTGTTTGGGCACAGCCATTCTACTCCCGGTGCTCTTCATGCCCTGTGTGCTGCTGCTCCCCTGGGAATGTGATGCTGCTGCAGTACTGATGGTTTGCTCTGGGGAAATGGTCGTTGCATCAAGCTACCTAGCTGAAACAAACTGAATAATGTGTTAGCTACTTCCTAGATTTCTTCGGCACATTCTTGTAAGGATTGCAGCGGCGCCATTTGTATGTTGGTGCCACATGATGCATGTAAGACTGTAACTGTACCTTGAAATTTCGGCTGTTTGTCCGTAGCTTATGACATGAAGACTATGCAGAAGCAGATCCTCGAACTTAACTACACGTAGCATGCTGTATGACTATACGAGTCAACTGCACGTGCAGTTAAGTTGGAGTATCCTGATGGTGTTGTTTTGACAGTTGTGAAGCTAGGCCGCTAGGGTGTTACTTTTCAGCTACTTCACCGAATTATTATTGCAAATTATTTATTTTATGTCTATC
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| CDS seq | CCTGAACACGGTGGAGGAGGAAGCGGAGGAGGGGGCGGCGGCGGCGGTGCGGACGCGGCGACGGACGAGGTGTACGCGCGGCTCGCGTTGGTGGCGGAGGGCGAGATGTTGCAGCGGAACTTCCGCGAGGGTGGAGGTGAAGATGGTGCAGGGGAGATGGAGGGTTGTGATGCAGAAAAGAAGCCCCGGATGCCACACATGTTCTGCAAAACTCTCACAGCATCTGATACAAGCACCCATGGAGGTTTCTCTGTTCCTCGCCGGGCTGCAGAGGACTGTTTCCCACCTTTGGACTATAAGACAGTTAGACCTTCTCAAGAGCTGATTGCCGTGGACTTACATGGCACACAATGGAAGTTCAGGCATATTTATAGAGGCCAGCCTCGTAGGCATCTTCTAACGATTGGATGGAGCTCATTTGTCAATAGGAAAAAACTAGTCTCAGGGGATGCTGTCTTGTTTCTTAGAGGTGATGATGGCCAACTAAGATTGGGTGTAAGGAGAGCAGTTCAACTTAGAAATGAGGCCCTCTTTGAACCTGTCAACAGCAGCGATTCAAAGCTACGCATTCTATCTTCTGTTGCCAGTTCCTTGGAAAATAAAAGTGTTTTCCACATTTGTTTCAACCCAAGGAGTGGTGCGTCAGAATTCATTGTACCGTATTGGAGATTATTGAAGAGCCTGAACCATCCATTTTCCATTGGAATGAGGTTCAGAGTTTGCTATGAGAGTGAAGATGCTAATGAGAGGTCCGCTGGATTAATTTCAGGCATTAGTGAAGTTGACCCCATAAGATGGCCTGGATCAAGATGGAAATGCCTACTGGTAAGATGGGATGATAGTACAGATAGCAGCCACCAAAACAGAGTTTCTCCATGGGAGATCGAGAGAGTTGGTGGCAGTGTCTCGGTTACCCATTCCTTGTCATCTGGGTCTAAGCGAACCAAATTGCACTTTCCTCAAGGCAGTTTGGATACTCCATTTCTTAATGGAAATGGTCACCCGGACTCCATGGGAACTGAAAATTTCCACAGGGTCTTGCAAGGTCAAGAATTTAGGGGTTCTAGGTCCCATGGTGTTGTATGCTCTGAATCACCTGGTGTACCAAACTTTCAATCTCCTGACAATAGGAGATTTTCTGCTGATATGCGGGGCTACATGATGCCAGCAAGTGGGCCCCCACAGCGGAACACAGAGTTTACTTATCAGCCCATAGGCTTCAGTGAGTCTCTTGGATTCCCAGAGGTCTTGCAAGGTCAAGAAATGTCACAAGTAGTTCCTTTGTTCCGAGGAGCTACTTTTGGCGCTCGTACACAGAATGACAGAGTTGTCTCTGCTAATTCTGTGCATAGATCAGCTGCACAGAGTGGATTGCTAGCTTCAACTCTAGGGCATCCCATCTCGCAGTTTACTCTGTCATCGTCAAAGGTATCTTCTCCCTCGTCGGTTCTGATGTTTAACCAAGCGACAGCTCCAAATCATGAAACAGTAAGCGGAACCAACAACAAAGGTATGCATGTCAGCCAGTTTGCTTCCCAGGAGATGCTCTCAGAAACTGTAACCTGGCCCGGCACACAACGTCAAACGCCGAGCGAAATCACGAGCAACCAGTTCGCCCTGGCGAGAATCCCAGCTCCTCCAAGCGGAGCTGAATCCGGATTGCCCAAGAGGGATGCCGGGAGAAGCAGCTGCAGACTGTTTGGCTTCTCCCTGACAGGCAACATGCTGGGAGAAGATGGAGAAGGCCTAGATGATGGAGCCATTGAAGCTGGTTGCGAAAACCCGCCCGTGCTGGAGCTGTTTGGGCACAGCCATTCTACTCCCGGTGCTCTTCATGCCCTGTGTGCTGCTGCTCCCCTGGGAATGTGA
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| Protein seq | PEHGGGGSGGGGGGGGADAATDEVYARLALVAEGEMLQRNFREGGGEDGAGEMEGCDAEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIGMRFRVCYESEDANERSAGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIERVGGSVSVTHSLSSGSKRTKLHFPQGSLDTPFLNGNGHPDSMGTENFHRVLQGQEFRGSRSHGVVCSESPGVPNFQSPDNRRFSADMRGYMMPASGPPQRNTEFTYQPIGFSESLGFPEVLQGQEMSQVVPLFRGATFGARTQNDRVVSANSVHRSAAQSGLLASTLGHPISQFTLSSSKVSSPSSVLMFNQATAPNHETVSGTNNKGMHVSQFASQEMLSETVTWPGTQRQTPSEITSNQFALARIPAPPSGAESGLPKRDAGRSSCRLFGFSLTGNMLGEDGEGLDDGAIEAGCENPPVLELFGHSHSTPGALHALCAAAPLGM |
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| Function | Auxin response factor 14 [UniProtKB/Swiss-Prot:Q0DGS1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_05g0515400 | OsNip_05t0515400-01 | Chr05 | 25555850 | 25561791 | + | RAP2018-11-26 | ||
| CDS seq | CCTGAACACGGTGGAGGAGGAAGCGGAGGAGGGGGCGGCGGCGGCGGTGCGGACGCGGCGACGGACGAGGTGTACGCGCGGCTCGCGTTGGTGGCGGAGGGCGAGATGTTGCAGCGGAACTTCCGCGAGGGTGGAGGTGAAGATGGTGCAGGGGAGATGGAGGGTTGTGATGCAGAAAAGAAGCCCCGGATGCCACACATGTTCTGCAAAACTCTCACAGCATCTGATACAAGCACCCATGGAGGTTTCTCTGTTCCTCGCCGGGCTGCAGAGGACTGTTTCCCACCTTTGGACTATAAGACAGTTAGACCTTCTCAAGAGCTGATTGCCGTGGACTTACATGGCACACAATGGAAGTTCAGGCATATTTATAGAGGCCAGCCTCGTAGGCATCTTCTAACGATTGGATGGAGCTCATTTGTCAATAGGAAAAAACTAGTCTCAGGGGATGCTGTCTTGTTTCTTAGAGGTGATGATGGCCAACTAAGATTGGGTGTAAGGAGAGCAGTTCAACTTAGAAATGAGGCCCTCTTTGAACCTGTCAACAGCAGCGATTCAAAGCTACGCATTCTATCTTCTGTTGCCAGTTCCTTGGAAAATAAAAGTGTTTTCCACATTTGTTTCAACCCAAGGAGTGGTGCGTCAGAATTCATTGTACCGTATTGGAGATTATTGAAGAGCCTGAACCATCCATTTTCCATTGGAATGAGGTTCAGAGTTTGCTATGAGAGTGAAGATGCTAATGAGAGGTCCGCTGGATTAATTTCAGGCATTAGTGAAGTTGACCCCATAAGATGGCCTGGATCAAGATGGAAATGCCTACTGGTAAGATGGGATGATAGTACAGATAGCAGCCACCAAAACAGAGTTTCTCCATGGGAGATCGAGAGAGTTGGTGGCAGTGTCTCGGTTACCCATTCCTTGTCATCTGGGTCTAAGCGAACCAAATTGCACTTTCCTCAAGGCAGTTTGGATACTCCATTTCTTAATGGAAATGGTCACCCGGACTCCATGGGAACTGAAAATTTCCACAGGGTCTTGCAAGGTCAAGAATTTAGGGGTTCTAGGTCCCATGGTGTTGTATGCTCTGAATCACCTGGTGTACCAAACTTTCAATCTCCTGACAATAGGAGATTTTCTGCTGATATGCGGGGCTACATGATGCCAGCAAGTGGGCCCCCACAGCGGAACACAGAGTTTACTTATCAGCCCATAGGCTTCAGTGAGTCTCTTGGATTCCCAGAGGTCTTGCAAGGTCAAGAAATGTCACAAGTAGTTCCTTTGTTCCGAGGAGCTACTTTTGGCGCTCGTACACAGAATGACAGAGTTGTCTCTGCTAATTCTGTGCATAGATCAGCTGCACAGAGTGGATTGCTAGCTTCAACTCTAGGGCATCCCATCTCGCAGTTTACTCTGTCATCGTCAAAGGTATCTTCTCCCTCGTCGGTTCTGATGTTTAACCAAGCGACAGCTCCAAATCATGAAACAGTAAGCGGAACCAACAACAAAGGTATGCATGTCAGCCAGTTTGCTTCCCAGGAGATGCTCTCAGAAACTGTAACCTGGCCCGGCACACAACGTCAAACGCCGAGCGAAATCACGAGCAACCAGTTCGCCCTGGCGAGAATCCCAGCTCCTCCAAGCGGAGCTGAATCCGGATTGCCCAAGAGGGATGCCGGGAGAAGCAGCTGCAGACTGTTTGGCTTCTCCCTGACAGGCAACATGCTGGGAGAAGATGGAGAAGGCCTAGATGATGGAGCCATTGAAGCTGGTTGCGAAAACCCGCCCGTGCTGGAGCTGTTTGGGCACAGCCATTCTACTCCCGGTGCTCTTCATGCCCTGTGTGCTGCTGCTCCCCTGGGAATGTGA
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| Protein seq | PEHGGGGSGGGGGGGGADAATDEVYARLALVAEGEMLQRNFREGGGEDGAGEMEGCDAEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIGMRFRVCYESEDANERSAGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIERVGGSVSVTHSLSSGSKRTKLHFPQGSLDTPFLNGNGHPDSMGTENFHRVLQGQEFRGSRSHGVVCSESPGVPNFQSPDNRRFSADMRGYMMPASGPPQRNTEFTYQPIGFSESLGFPEVLQGQEMSQVVPLFRGATFGARTQNDRVVSANSVHRSAAQSGLLASTLGHPISQFTLSSSKVSSPSSVLMFNQATAPNHETVSGTNNKGMHVSQFASQEMLSETVTWPGTQRQTPSEITSNQFALARIPAPPSGAESGLPKRDAGRSSCRLFGFSLTGNMLGEDGEGLDDGAIEAGCENPPVLELFGHSHSTPGALHALCAAAPLGM
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_05g0515400 | OsNip_05t0515400-02 | Chr05 | 25558930 | 25561582 | + | RAP2018-11-26 | ||
| CDS seq | TTATTGAAGAGCCTGAACCATCCATTTTCCATTGGAATGAGGTTCAGAGTTTGCTATGAGAGTGAAGATGCTAATGAGAGGTCCGCTGGATTAATTTCAGGCATTAGTGAAGTTGACCCCATAAGATGGCCTGGATCAAGATGGAAATGCCTACTGGTAAGATGGGATGATAGTACAGATAGCAGCCACCAAAACAGAGTTTCTCCATGGGAGATCGAGAGAGTTGGTGGCAGTGTCTCGGTTACCCATTCCTTGTCATCTGGGTCTAAGCGAACCAAATTGCACTTTCCTCAAGGCAGTTTGGATACTCCATTTCTTAATGGAAATGGTCACCCGGACTCCATGGGAACTGAAAATTTCCACAGGGTCTTGCAAGGTCAAGAATTTAGGGGTTCTAGGTCCCATGGTGTTGTATGCTCTGAATCACCTGGTGTACCAAACTTTCAATCTCCTGACAATAGGAGATTTTCTGCTGATATGCGGGGCTACATGATGCCAGCAAGTGGGCCCCCACAGCGGAACACAGAGTTTACTTATCAGCCCATAGGCTTCAGTGAGTCTCTTGGATTCCCAGAGGTCTTGCAAGGTCAAGAAATGTCACAAGTAGTTCCTTTGTTCCGAGGAGCTACTTTTGGCGCTCGTACACAGAATGACAGAGTTGTCTCTGCTAATTCTGTGCATAGATCAGCTGCACAGAGTGGATTGCTAGCTTCAACTCTAGGGCATCCCATCTCGCAGTTTACTCTGTCATCGTCAAAGGTATCTTCTCCCTCGTCGGTTCTGATGTTTAACCAAGCGACAGCTCCAAATCATGAAACAGTAAGCGGAACCAACAACAAAGGTATGCATGTCAGCCAGTTTGCTTCCCAGGAGATGCTCTCAGAAACTGTAACCTGGCCCGGCACACAACGTCAAACGCCGAGCGAAATCACGAGCAACCAGTTCGCCCTGGCGAGAATCCCAGCTCCTCCAAGCGGAGCTGAATCCGGATTGCCCAAGAGGGATGCCGGGAGAAGCAGCTGCAGACTGTTTGGCTTCTCCCTGACAGGCAACATGCTGGGAGAAGATGGAGAAGGCCTAGATGATGGAGCCATTGAAGCTGGTTGCGAAAACCCGCCCGTGCTGGAGCTGTTTGGGCACAGCCATTCTACTCCCGGTGCTCTTCATGCCCTGTGTGCTGCTGCTCCCCTGGGAATGTGA
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| Protein seq | LLKSLNHPFSIGMRFRVCYESEDANERSAGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIERVGGSVSVTHSLSSGSKRTKLHFPQGSLDTPFLNGNGHPDSMGTENFHRVLQGQEFRGSRSHGVVCSESPGVPNFQSPDNRRFSADMRGYMMPASGPPQRNTEFTYQPIGFSESLGFPEVLQGQEMSQVVPLFRGATFGARTQNDRVVSANSVHRSAAQSGLLASTLGHPISQFTLSSSKVSSPSSVLMFNQATAPNHETVSGTNNKGMHVSQFASQEMLSETVTWPGTQRQTPSEITSNQFALARIPAPPSGAESGLPKRDAGRSSCRLFGFSLTGNMLGEDGEGLDDGAIEAGCENPPVLELFGHSHSTPGALHALCAAAPLGM
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.095929 | 2.503075 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0753500 | RBH | 0.662511 | 0.509051 | 4.269641 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g43920 | RBH | 0.000000 | 0.059505 | 0.486704 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0515400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0023540 | RBH | 0.0 | 0.000000 | 0.583082 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0023440 | RBH | 0.091467 | 0.957108 | 2.148605 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0023390 | RBH | 0.0 | 0.000000 | 1.374048 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0023370 | RBH | 0.025304 | 0.097112 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0023470 | RBH | 1.979643 | 0.000000 | 3.741773 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0395800 | RBH | 2.4047235 | 4.2638965 | 7.2083185 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0023060 | RBH | 0.0 | 0.059583 | 0.247404 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0406100 | RBH | 3.015194 | 3.1322095 | 19.456069 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0023220 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0023130 | RBH | 0.000000 | 1.884007 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0023300 | RBH | 0.857697 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0023320 | RBH | 0.205188 | 0.266041 | 0.268725 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0023330 | RBH | 0.043568 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G022790 | RBH | 0.000000 | 0.0 | 0.944918 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0023170 | RBH | 0.000000 | 2.269352 | 1.485968 |
