Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_05g0492200 | OGI:05065490 | 14/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr05:24184504-24189203 | ||||||||
| Gene Symbol | YR1, YR7, YR11, YR20, YR22, YR24 | ||||||||||
| DNA seq | CCGTTCCAATTAGCATACCCAACCGAAGAACATGGTGATCGGAGAAGCTGTTCTGTCTGCCTTCATGCAAGCACTTTTTGATAAAGTGATTGCTGCTGCTATAGGTGAGCTGAAATTCCCCCAAGACATAGCTGAGGAGCTGCAGAAGTTATCCAGCAGTCTGTCAACGATTCAAGCGCATGTCGAAGATGCTGAGGCTCGGCAACTTAAGGATAGGGCGGCACGAAGCTGGCTTGCCAAGCTTAAGGATGTCGCATATGAGATGGATGACTTGCTCGATGAATATGCAGCTGAGACCCTCCAATCTGAACTAGAAGGCTCGTCCCGCAGTCGCCATCTGAGCAAGGTTAGAAGCAGTTTCTGTTGCCTTTGGTTGAACAACTGTTTTTCCAACCACAAGATTGTGCAACAAATAAGGAAGATCGAGGAGAAGATCGACAGGCTTGTGAAAGAAAGACAGCTTATTGGGCCCGATATGAGCAGTACCATGGACAGAGAAGAGATCAAAGAGAGGCCGAAGACCAGTTCACTAATTGATGGCTCAAGTGTGTTTGGGAGAGAAGAAGATAAAGAGAACATTGTGAAGATGCTGTTGACTCCGAACAACTCCAACCATGCCAACGTTTCTGTTCTTCCCATAGTGGGTATGGGGGGACTAGGGAAGACAACTCTAACACAGCTTGTCTACAATGATCCAAGAGTAAAGGAGTACTTCCAGTTACGGGTGTGGCTGTGCGTTTCTGAAAATTTTGACGAAATGAAGCTTACCAAGGAAACCATTGAATCAGTTGCCAGTGGGTTCTCATCGGTCACGACCAACATGAACTTGCTTCAAGAAGATCTCTCAAAAAAGCTGGAAGGTAAAAGATTTCTTCTAGTACTTGATGATGTTTGGAATGAGGACCCTGAAAAATGGGACAGATATCGTTGTGCTCTTGTTAGTGGAAGCAATGGAAGCAGAATTGTAGTAACTACACGGAACAAAAATGTTGGGAAACTAATGGGTGGAATGACTCCTTACTTTCTAAAGCAGTTATCTGAAAATGATTGCTGGAACTTGTTCAGGAGCTATGCATTTGCTGATGGTGACTCCAGTTTGCACCCACATTTAGAAATTATAGGCAAGGAAATTGTGAAGAAGTTGAAAGGCCTCCCACTTGCTGCAAAAGCAATAGGTAGTTTGTTATGTACCAAGGATACTGAGGATGATTGGAAGAATGTATTAAGGAGTGAAATATGGGAACTACCATCAGATAAGAACAATATATTACCAGCACTGAGGCTGAGTTACAATCATTTGCCTGCCATATTGAAGCGATGTTTTGCGTTTTGCTCAGTCTTCCATAAAGATTATGTGTTCGAAAAAGAAACCTTGGTGCAAATATGGATGGCCCTTGGGTTCATTCAGTCTCCAGGAAGGAGAACAATTGAGGAACTTGGGAGCAGCTATTTTGATGAACTATTAAGCAGATCCTTCTTCCAACATCACAAAGGAGGATATGTGATGCATGACGCCATGCATGACCTTGCACAGTCGGTCTCAATGGATGAATGCTTAAGATTGGATGACCCTCCAAACAGCAGCAGCACTTCAAGAAGTTCCAGGCACCTGTCATTCTCTTGTCACAATAGAAGCCGGACTTCATTTGAAGACTTTCTTGGATTTAAGAGAGCACGCACACTTCTACTATTAAATGGATATAAATCAAGGACAAGCCCTATTCCCAGTGATCTGTTCCTCATGTTAAGGTACCTCCATGTGCTTGAATTGAACCGGCGAGACATTACTGAGTTGCCAGACTCCATCGGGAACCTAAAAATGCTCCGTTATTTGAATCTTTCAGGCACTGGTATAACTGTGTTGCCTTCATCAATTGGTAGGCTCTTCAACTTGCAAACACTTAAGTTGAAAAACTGCCATGTATTAGAGTGCATCCCAGAAAGCATAACCAATCTTGTAAATCTTCGATGGCTAGAAGCACGAATAGATTTGATCACTGGCATTGCAAGAATAGGGAACTTGACTTGCCTCCAACAGTTGGAGGAATTTGTTGTTCATAACGACAAAGGATACAAGATCAGTGAATTGAAAACAATGATGAGTATCGGAGGTCGTATATGTATTAAGAATCTTGAGGCTGTAGATAGTGCAGAAGAGGCAGGTGAAGCTTTACTAAGCAAGAAGACACGCATCAGGATTCTAGACCTGGTATGGTCCGACAGGAGGCACCTAACTTCAGAAGAAGCAAATCAAGAGAAAGAGATACTTGAACAGCTCCAACCACATTGCGAACTCAGGGAGCTGACGGTCAAGGGATTTGTGGGATTCTACTTTCCAAAGTGGTTAAGCAGACTTTGTCACTTGCAAACTATTCACCTGTCTGACTGTACAAATTGTTCGATTCTACCAGCACTAGGGGAGCTACCTCTACTCAAGTTCTTAGACATTGGGGGTTTTCCTGCCATTATTCAAATCAACCAAGAGTTTTCAGGCAGCGATGAGGTTAAGGGGTTTCCGTCACTGAAGGAACTTGTAATTGAAGACATGGTTAATCTCCAAAGATGGGTTTCTTTTCAAGATGGTGAGTTGCTTCCATCCCTCACAGAACTTGAAGTGATTGACTGCCCACAAGTAACAGAATTCCCGCCCTTACCACCGACATTAGTAAAGCTCATAATTTCAGAAACAGGGTTCACTATTCTTCCAGAAGTCCATGTACCAAACTGTCAATTTTCATCATCATTAGCATGTTTACAGATTCATCAGTGCCCAAATCTCATATCCTTACAGAATGGATTGCTTAGCCAGAAATTATTCTCTCTCCAGCAATTAACCATTACTAAGTGCGCAGAGCTAACTCATCTGCCAGCTGAAGGATTCAGATCCCTGACTGCTCTTAAAAGTCTCCACATTTATGATTGCGAGATGCTGGCACCATCAGAGCAGCATAGCTTGCTACCCCCCATGCTTGAAGACCTGCGCATCACTTCATGCTCCAATCTAATCAATCCTCTTCTTCAAGAGCTAAATGAACTATCCTCACTGATACATCTTACCATCACTAATTGTGCCAACTTTTATTCTTTTCCAGTAAAGCTTCCAGTCACTCTGCAAACATTGGAGATCTTCCAGTGCAGTGATATGAGCTACTTGCCAGCTGACCTAAATGAAGTTTCCTGTCTAACAGTTATGACCATCTTGAAATGCCCTCTTATAACATGCTTGTCAGAACATGGCCTTCCAGAATCACTAAAAGAATTATACATCAAAGAATGCCCTTTAATAACAGAGAGGTGCCAGGAAATTGGTGGAGAAGATTGGCCTAAAATTGCTCATGTACCAGTAATAGAGATAGATGATGATTACTTCATACCCAACAGGAGCATAAGAAGAAGGTTGTCCTGAATGCAACAGCGATATAGCTGAAATGGTAAGAACTGAATGCCTTTTCTGTTTTTTCTGTCTAAGTATGTGTTGTCAACTAAGTACTCAACTTATCAGTGTTAAAACTCTTTGATATAAAATGTTTCTTTACAAGTAAAAAAAATTGAGTAAATTTCACAAAACTACAGGTACTTTAAACAAATTATCAAAAAACTACAAATTTAACATGATGTATCCAAAACTACAGATTTAACACTGAAATTATCGCAAAACTACAGATTTAAGGTGGAATATCACAAAACTACACATTTAGTAACAAAGTTATCACAAAACTACAGGATTTAAGGTGGGATATTGCAAAACTACACATTTAGTAACAATGTTATCACAAAACTACAGGTTTAGTATCAATTTAACCACAAAAGTTGGACATTTTTAACTCAAACCTAACATTAGTGTTAAGTATTTAAACCCTAAAATATGTAGTTTTGTAATAATTTTATTATTAAAACTATAGTTTTGCGATACTTAGCCTTAAACCTGTAGTTTTGTGATAAATTTATTGTTAAATCTGTAGTTTTGTGATACATGACCTTAAATCTATAGTTTTCTGATAATTTGACCAAAGTATCTATAGTTTTGTGAATTTTACTCAAAAAAATTCAGACCAGCACCCCAAAACCATGGTCAAGTCATACCTTGTAAGGGAATGAAAACCTAAAACTTTGCAGTGAGACATGCATATTTTCTCATGGAACCATGCATAGTAACAAAAACATTTGGTCCAATTTTAGAGAATGTTGTGGCGTGACTTCCCAAGAAGAAAAGTCCAGGGCAGTACTCTATACAGATGGTAACTGGTTTCTAAAAATATCGATGATAAAGTATTAAAGTTCCATGCATAAGTATTATAAGTTAGCGCAGCTCACTTAGTTTGACCAAATAAAAATAATGGCGTCCATCTTTCTTTAAAAAAATGGTCAAAACACTTATTTGTGCACTATGTTCTCTGTATTTTTCAGATCACATATGAACTCATGATGTTGGTGGATGCTGATACTTCAAGAACATTATGCATTTATGCATTCAACCTGCCATCACAAAGCACTGTGAAGAAAAAAAATCAGGTACTTTAGCGGAAGAGTATGGTCTTAACTAATCAGTTCCTTGCGTTTCTCAAACATTGGGAAGCTTCCATTATGTCATAAATTTATAAACATCATTGTCCTAAGCGCATGTTTCAGATCCAGCTTATTCTATTGTGGCATTGTTTGTACTCATCTAGTTAAATGTGTGACTGTAACTTTCAAGAGTT
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| CDS seq | ATGGTGATCGGAGAAGCTGTTCTGTCTGCCTTCATGCAAGCACTTTTTGATAAAGTGATTGCTGCTGCTATAGGTGAGCTGAAATTCCCCCAAGACATAGCTGAGGAGCTGCAGAAGTTATCCAGCAGTCTGTCAACGATTCAAGCGCATGTCGAAGATGCTGAGGCTCGGCAACTTAAGGATAGGGCGGCACGAAGCTGGCTTGCCAAGCTTAAGGATGTCGCATATGAGATGGATGACTTGCTCGATGAATATGCAGCTGAGACCCTCCAATCTGAACTAGAAGGCTCGTCCCGCAGTCGCCATCTGAGCAAGGTTAGAAGCAGTTTCTGTTGCCTTTGGTTGAACAACTGTTTTTCCAACCACAAGATTGTGCAACAAATAAGGAAGATCGAGGAGAAGATCGACAGGCTTGTGAAAGAAAGACAGCTTATTGGGCCCGATATGAGCAGTACCATGGACAGAGAAGAGATCAAAGAGAGGCCGAAGACCAGTTCACTAATTGATGGCTCAAGTGTGTTTGGGAGAGAAGAAGATAAAGAGAACATTGTGAAGATGCTGTTGACTCCGAACAACTCCAACCATGCCAACGTTTCTGTTCTTCCCATAGTGGGTATGGGGGGACTAGGGAAGACAACTCTAACACAGCTTGTCTACAATGATCCAAGAGTAAAGGAGTACTTCCAGTTACGGGTGTGGCTGTGCGTTTCTGAAAATTTTGACGAAATGAAGCTTACCAAGGAAACCATTGAATCAGTTGCCAGTGGGTTCTCATCGGTCACGACCAACATGAACTTGCTTCAAGAAGATCTCTCAAAAAAGCTGGAAGGTAAAAGATTTCTTCTAGTACTTGATGATGTTTGGAATGAGGACCCTGAAAAATGGGACAGATATCGTTGTGCTCTTGTTAGTGGAAGCAATGGAAGCAGAATTGTAGTAACTACACGGAACAAAAATGTTGGGAAACTAATGGGTGGAATGACTCCTTACTTTCTAAAGCAGTTATCTGAAAATGATTGCTGGAACTTGTTCAGGAGCTATGCATTTGCTGATGGTGACTCCAGTTTGCACCCACATTTAGAAATTATAGGCAAGGAAATTGTGAAGAAGTTGAAAGGCCTCCCACTTGCTGCAAAAGCAATAGGTAGTTTGTTATGTACCAAGGATACTGAGGATGATTGGAAGAATGTATTAAGGAGTGAAATATGGGAACTACCATCAGATAAGAACAATATATTACCAGCACTGAGGCTGAGTTACAATCATTTGCCTGCCATATTGAAGCGATGTTTTGCGTTTTGCTCAGTCTTCCATAAAGATTATGTGTTCGAAAAAGAAACCTTGGTGCAAATATGGATGGCCCTTGGGTTCATTCAGTCTCCAGGAAGGAGAACAATTGAGGAACTTGGGAGCAGCTATTTTGATGAACTATTAAGCAGATCCTTCTTCCAACATCACAAAGGAGGATATGTGATGCATGACGCCATGCATGACCTTGCACAGTCGGTCTCAATGGATGAATGCTTAAGATTGGATGACCCTCCAAACAGCAGCAGCACTTCAAGAAGTTCCAGGCACCTGTCATTCTCTTGTCACAATAGAAGCCGGACTTCATTTGAAGACTTTCTTGGATTTAAGAGAGCACGCACACTTCTACTATTAAATGGATATAAATCAAGGACAAGCCCTATTCCCAGTGATCTGTTCCTCATGTTAAGGTACCTCCATGTGCTTGAATTGAACCGGCGAGACATTACTGAGTTGCCAGACTCCATCGGGAACCTAAAAATGCTCCGTTATTTGAATCTTTCAGGCACTGGTATAACTGTGTTGCCTTCATCAATTGGTAGGCTCTTCAACTTGCAAACACTTAAGTTGAAAAACTGCCATGTATTAGAGTGCATCCCAGAAAGCATAACCAATCTTGTAAATCTTCGATGGCTAGAAGCACGAATAGATTTGATCACTGGCATTGCAAGAATAGGGAACTTGACTTGCCTCCAACAGTTGGAGGAATTTGTTGTTCATAACGACAAAGGATACAAGATCAGTGAATTGAAAACAATGATGAGTATCGGAGGTCGTATATGTATTAAGAATCTTGAGGCTGTAGATAGTGCAGAAGAGGCAGGTGAAGCTTTACTAAGCAAGAAGACACGCATCAGGATTCTAGACCTGGTATGGTCCGACAGGAGGCACCTAACTTCAGAAGAAGCAAATCAAGAGAAAGAGATACTTGAACAGCTCCAACCACATTGCGAACTCAGGGAGCTGACGGTCAAGGGATTTGTGGGATTCTACTTTCCAAAGTGGTTAAGCAGACTTTGTCACTTGCAAACTATTCACCTGTCTGACTGTACAAATTGTTCGATTCTACCAGCACTAGGGGAGCTACCTCTACTCAAGTTCTTAGACATTGGGGGTTTTCCTGCCATTATTCAAATCAACCAAGAGTTTTCAGGCAGCGATGAGGTTAAGGGGTTTCCGTCACTGAAGGAACTTGTAATTGAAGACATGGTTAATCTCCAAAGATGGGTTTCTTTTCAAGATGGTGAGTTGCTTCCATCCCTCACAGAACTTGAAGTGATTGACTGCCCACAAGTAACAGAATTCCCGCCCTTACCACCGACATTAGTAAAGCTCATAATTTCAGAAACAGGGTTCACTATTCTTCCAGAAGTCCATGTACCAAACTGTCAATTTTCATCATCATTAGCATGTTTACAGATTCATCAGTGCCCAAATCTCATATCCTTACAGAATGGATTGCTTAGCCAGAAATTATTCTCTCTCCAGCAATTAACCATTACTAAGTGCGCAGAGCTAACTCATCTGCCAGCTGAAGGATTCAGATCCCTGACTGCTCTTAAAAGTCTCCACATTTATGATTGCGAGATGCTGGCACCATCAGAGCAGCATAGCTTGCTACCCCCCATGCTTGAAGACCTGCGCATCACTTCATGCTCCAATCTAATCAATCCTCTTCTTCAAGAGCTAAATGAACTATCCTCACTGATACATCTTACCATCACTAATTGTGCCAACTTTTATTCTTTTCCAGTAAAGCTTCCAGTCACTCTGCAAACATTGGAGATCTTCCAGTGCAGTGATATGAGCTACTTGCCAGCTGACCTAAATGAAGTTTCCTGTCTAACAGTTATGACCATCTTGAAATGCCCTCTTATAACATGCTTGTCAGAACATGGCCTTCCAGAATCACTAAAAGAATTATACATCAAAGAATGCCCTTTAATAACAGAGAGGTGCCAGGAAATTGGTGGAGAAGATTGGCCTAAAATTGCTCATGTACCAGTAATAGAGATAGATGATGATTACTTCATACCCAACAGGAGCATAAGAAGAAGGTTGTCCTGA
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| Protein seq | MVIGEAVLSAFMQALFDKVIAAAIGELKFPQDIAEELQKLSSSLSTIQAHVEDAEARQLKDRAARSWLAKLKDVAYEMDDLLDEYAAETLQSELEGSSRSRHLSKVRSSFCCLWLNNCFSNHKIVQQIRKIEEKIDRLVKERQLIGPDMSSTMDREEIKERPKTSSLIDGSSVFGREEDKENIVKMLLTPNNSNHANVSVLPIVGMGGLGKTTLTQLVYNDPRVKEYFQLRVWLCVSENFDEMKLTKETIESVASGFSSVTTNMNLLQEDLSKKLEGKRFLLVLDDVWNEDPEKWDRYRCALVSGSNGSRIVVTTRNKNVGKLMGGMTPYFLKQLSENDCWNLFRSYAFADGDSSLHPHLEIIGKEIVKKLKGLPLAAKAIGSLLCTKDTEDDWKNVLRSEIWELPSDKNNILPALRLSYNHLPAILKRCFAFCSVFHKDYVFEKETLVQIWMALGFIQSPGRRTIEELGSSYFDELLSRSFFQHHKGGYVMHDAMHDLAQSVSMDECLRLDDPPNSSSTSRSSRHLSFSCHNRSRTSFEDFLGFKRARTLLLLNGYKSRTSPIPSDLFLMLRYLHVLELNRRDITELPDSIGNLKMLRYLNLSGTGITVLPSSIGRLFNLQTLKLKNCHVLECIPESITNLVNLRWLEARIDLITGIARIGNLTCLQQLEEFVVHNDKGYKISELKTMMSIGGRICIKNLEAVDSAEEAGEALLSKKTRIRILDLVWSDRRHLTSEEANQEKEILEQLQPHCELRELTVKGFVGFYFPKWLSRLCHLQTIHLSDCTNCSILPALGELPLLKFLDIGGFPAIIQINQEFSGSDEVKGFPSLKELVIEDMVNLQRWVSFQDGELLPSLTELEVIDCPQVTEFPPLPPTLVKLIISETGFTILPEVHVPNCQFSSSLACLQIHQCPNLISLQNGLLSQKLFSLQQLTITKCAELTHLPAEGFRSLTALKSLHIYDCEMLAPSEQHSLLPPMLEDLRITSCSNLINPLLQELNELSSLIHLTITNCANFYSFPVKLPVTLQTLEIFQCSDMSYLPADLNEVSCLTVMTILKCPLITCLSEHGLPESLKELYIKECPLITERCQEIGGEDWPKIAHVPVIEIDDDYFIPNRSIRRRLS |
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| Function | Disease resistance protein RGA2 [UniProtKB/Swiss-Prot:Q7XBQ9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_05g0492200 | OsNip_05t0492200-01 | Chr05 | 24184504 | 24189203 | + | RAP2018-11-26 | ||
| CDS seq | ATGGTGATCGGAGAAGCTGTTCTGTCTGCCTTCATGCAAGCACTTTTTGATAAAGTGATTGCTGCTGCTATAGGTGAGCTGAAATTCCCCCAAGACATAGCTGAGGAGCTGCAGAAGTTATCCAGCAGTCTGTCAACGATTCAAGCGCATGTCGAAGATGCTGAGGCTCGGCAACTTAAGGATAGGGCGGCACGAAGCTGGCTTGCCAAGCTTAAGGATGTCGCATATGAGATGGATGACTTGCTCGATGAATATGCAGCTGAGACCCTCCAATCTGAACTAGAAGGCTCGTCCCGCAGTCGCCATCTGAGCAAGGTTAGAAGCAGTTTCTGTTGCCTTTGGTTGAACAACTGTTTTTCCAACCACAAGATTGTGCAACAAATAAGGAAGATCGAGGAGAAGATCGACAGGCTTGTGAAAGAAAGACAGCTTATTGGGCCCGATATGAGCAGTACCATGGACAGAGAAGAGATCAAAGAGAGGCCGAAGACCAGTTCACTAATTGATGGCTCAAGTGTGTTTGGGAGAGAAGAAGATAAAGAGAACATTGTGAAGATGCTGTTGACTCCGAACAACTCCAACCATGCCAACGTTTCTGTTCTTCCCATAGTGGGTATGGGGGGACTAGGGAAGACAACTCTAACACAGCTTGTCTACAATGATCCAAGAGTAAAGGAGTACTTCCAGTTACGGGTGTGGCTGTGCGTTTCTGAAAATTTTGACGAAATGAAGCTTACCAAGGAAACCATTGAATCAGTTGCCAGTGGGTTCTCATCGGTCACGACCAACATGAACTTGCTTCAAGAAGATCTCTCAAAAAAGCTGGAAGGTAAAAGATTTCTTCTAGTACTTGATGATGTTTGGAATGAGGACCCTGAAAAATGGGACAGATATCGTTGTGCTCTTGTTAGTGGAAGCAATGGAAGCAGAATTGTAGTAACTACACGGAACAAAAATGTTGGGAAACTAATGGGTGGAATGACTCCTTACTTTCTAAAGCAGTTATCTGAAAATGATTGCTGGAACTTGTTCAGGAGCTATGCATTTGCTGATGGTGACTCCAGTTTGCACCCACATTTAGAAATTATAGGCAAGGAAATTGTGAAGAAGTTGAAAGGCCTCCCACTTGCTGCAAAAGCAATAGGTAGTTTGTTATGTACCAAGGATACTGAGGATGATTGGAAGAATGTATTAAGGAGTGAAATATGGGAACTACCATCAGATAAGAACAATATATTACCAGCACTGAGGCTGAGTTACAATCATTTGCCTGCCATATTGAAGCGATGTTTTGCGTTTTGCTCAGTCTTCCATAAAGATTATGTGTTCGAAAAAGAAACCTTGGTGCAAATATGGATGGCCCTTGGGTTCATTCAGTCTCCAGGAAGGAGAACAATTGAGGAACTTGGGAGCAGCTATTTTGATGAACTATTAAGCAGATCCTTCTTCCAACATCACAAAGGAGGATATGTGATGCATGACGCCATGCATGACCTTGCACAGTCGGTCTCAATGGATGAATGCTTAAGATTGGATGACCCTCCAAACAGCAGCAGCACTTCAAGAAGTTCCAGGCACCTGTCATTCTCTTGTCACAATAGAAGCCGGACTTCATTTGAAGACTTTCTTGGATTTAAGAGAGCACGCACACTTCTACTATTAAATGGATATAAATCAAGGACAAGCCCTATTCCCAGTGATCTGTTCCTCATGTTAAGGTACCTCCATGTGCTTGAATTGAACCGGCGAGACATTACTGAGTTGCCAGACTCCATCGGGAACCTAAAAATGCTCCGTTATTTGAATCTTTCAGGCACTGGTATAACTGTGTTGCCTTCATCAATTGGTAGGCTCTTCAACTTGCAAACACTTAAGTTGAAAAACTGCCATGTATTAGAGTGCATCCCAGAAAGCATAACCAATCTTGTAAATCTTCGATGGCTAGAAGCACGAATAGATTTGATCACTGGCATTGCAAGAATAGGGAACTTGACTTGCCTCCAACAGTTGGAGGAATTTGTTGTTCATAACGACAAAGGATACAAGATCAGTGAATTGAAAACAATGATGAGTATCGGAGGTCGTATATGTATTAAGAATCTTGAGGCTGTAGATAGTGCAGAAGAGGCAGGTGAAGCTTTACTAAGCAAGAAGACACGCATCAGGATTCTAGACCTGGTATGGTCCGACAGGAGGCACCTAACTTCAGAAGAAGCAAATCAAGAGAAAGAGATACTTGAACAGCTCCAACCACATTGCGAACTCAGGGAGCTGACGGTCAAGGGATTTGTGGGATTCTACTTTCCAAAGTGGTTAAGCAGACTTTGTCACTTGCAAACTATTCACCTGTCTGACTGTACAAATTGTTCGATTCTACCAGCACTAGGGGAGCTACCTCTACTCAAGTTCTTAGACATTGGGGGTTTTCCTGCCATTATTCAAATCAACCAAGAGTTTTCAGGCAGCGATGAGGTTAAGGGGTTTCCGTCACTGAAGGAACTTGTAATTGAAGACATGGTTAATCTCCAAAGATGGGTTTCTTTTCAAGATGGTGAGTTGCTTCCATCCCTCACAGAACTTGAAGTGATTGACTGCCCACAAGTAACAGAATTCCCGCCCTTACCACCGACATTAGTAAAGCTCATAATTTCAGAAACAGGGTTCACTATTCTTCCAGAAGTCCATGTACCAAACTGTCAATTTTCATCATCATTAGCATGTTTACAGATTCATCAGTGCCCAAATCTCATATCCTTACAGAATGGATTGCTTAGCCAGAAATTATTCTCTCTCCAGCAATTAACCATTACTAAGTGCGCAGAGCTAACTCATCTGCCAGCTGAAGGATTCAGATCCCTGACTGCTCTTAAAAGTCTCCACATTTATGATTGCGAGATGCTGGCACCATCAGAGCAGCATAGCTTGCTACCCCCCATGCTTGAAGACCTGCGCATCACTTCATGCTCCAATCTAATCAATCCTCTTCTTCAAGAGCTAAATGAACTATCCTCACTGATACATCTTACCATCACTAATTGTGCCAACTTTTATTCTTTTCCAGTAAAGCTTCCAGTCACTCTGCAAACATTGGAGATCTTCCAGTGCAGTGATATGAGCTACTTGCCAGCTGACCTAAATGAAGTTTCCTGTCTAACAGTTATGACCATCTTGAAATGCCCTCTTATAACATGCTTGTCAGAACATGGCCTTCCAGAATCACTAAAAGAATTATACATCAAAGAATGCCCTTTAATAACAGAGAGGTGCCAGGAAATTGGTGGAGAAGATTGGCCTAAAATTGCTCATGTACCAGTAATAGAGATAGATGATGATTACTTCATACCCAACAGGAGCATAAGAAGAAGGTTGTCCTGA
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| Protein seq | MVIGEAVLSAFMQALFDKVIAAAIGELKFPQDIAEELQKLSSSLSTIQAHVEDAEARQLKDRAARSWLAKLKDVAYEMDDLLDEYAAETLQSELEGSSRSRHLSKVRSSFCCLWLNNCFSNHKIVQQIRKIEEKIDRLVKERQLIGPDMSSTMDREEIKERPKTSSLIDGSSVFGREEDKENIVKMLLTPNNSNHANVSVLPIVGMGGLGKTTLTQLVYNDPRVKEYFQLRVWLCVSENFDEMKLTKETIESVASGFSSVTTNMNLLQEDLSKKLEGKRFLLVLDDVWNEDPEKWDRYRCALVSGSNGSRIVVTTRNKNVGKLMGGMTPYFLKQLSENDCWNLFRSYAFADGDSSLHPHLEIIGKEIVKKLKGLPLAAKAIGSLLCTKDTEDDWKNVLRSEIWELPSDKNNILPALRLSYNHLPAILKRCFAFCSVFHKDYVFEKETLVQIWMALGFIQSPGRRTIEELGSSYFDELLSRSFFQHHKGGYVMHDAMHDLAQSVSMDECLRLDDPPNSSSTSRSSRHLSFSCHNRSRTSFEDFLGFKRARTLLLLNGYKSRTSPIPSDLFLMLRYLHVLELNRRDITELPDSIGNLKMLRYLNLSGTGITVLPSSIGRLFNLQTLKLKNCHVLECIPESITNLVNLRWLEARIDLITGIARIGNLTCLQQLEEFVVHNDKGYKISELKTMMSIGGRICIKNLEAVDSAEEAGEALLSKKTRIRILDLVWSDRRHLTSEEANQEKEILEQLQPHCELRELTVKGFVGFYFPKWLSRLCHLQTIHLSDCTNCSILPALGELPLLKFLDIGGFPAIIQINQEFSGSDEVKGFPSLKELVIEDMVNLQRWVSFQDGELLPSLTELEVIDCPQVTEFPPLPPTLVKLIISETGFTILPEVHVPNCQFSSSLACLQIHQCPNLISLQNGLLSQKLFSLQQLTITKCAELTHLPAEGFRSLTALKSLHIYDCEMLAPSEQHSLLPPMLEDLRITSCSNLINPLLQELNELSSLIHLTITNCANFYSFPVKLPVTLQTLEIFQCSDMSYLPADLNEVSCLTVMTILKCPLITCLSEHGLPESLKELYIKECPLITERCQEIGGEDWPKIAHVPVIEIDDDYFIPNRSIRRRLS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.102680 | 0.453488 | 0.238762 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0799000 | RBH | 0.307265 | 0.086279 | 0.362942 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g41290 | RBH | 0.299636 | 0.300410 | 0.158597 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0492200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0021900 | RBH | 0.0 | 2.126999 | 0.772797 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0021860 | RBH | 0.0 | 0.000000 | 0.388473 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0021790 | RBH | 0.000000 | 0.499754 | 1.892815 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0021780 | RBH | 0.0 | 0.047865 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0021890 | RBH | 1.053862 | 1.699769 | 1.769167 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0280500 | SBH | 0.3240555 | 1.5596135 | 0.9447545 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0021440 | RBH | 0.000000 | 0.000000 | 0.162741 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0384500 | SBH | 2.032153 | 5.550104 | 5.3436935 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0021750 | RBH | 0.111200 | 0.074737 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0021680 | RBH | 0.244631 | 2.887862 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0021780 | RBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0021850 | RBH | 0.418274 | 0.314073 | 0.114854 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0021830 | RBH | 0.039619 | 0.645347 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G021270 | RBH | 0.335124 | 1.775454 | 0.918686 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0021700 | SBH | 1.126967 | 7.234449 | 3.237396 |
