Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_05g0408200 | OGI:05053820 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr05:19923167-19932333 | ||||||||
| Gene Symbol | SPL9, OsSPL9 | ||||||||||
| DNA seq | GTCCTAGTCATCGGACGCCGCCCACCTACCCGACTACCCGAGGCAGCCTCTCTCTCCTCCCTCGCCCACCACCACACGACACGAGACGAGAAGACTGATTCATTCGCTCGCGTACACGCCTAGGCGCTCCGAGAATTCGTGAGGGAATCCCGCATCGCCGGAGCCGATCGGCGGCGCCGCGGGCGGGTGGGGGGGGGGGGTTAGGGTTAGGGTTTTGGGGGTGGCCCACCGGGGATGGACGCCCCCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGAGGTGGGGTGGATGCCGGCGAGCCCGTCTGGGACTGGGGGAACCTCCTCGACTTCGCCGTCCATGACGACGACTCGCTGGTCCTCCCGTGGGGGGACGATTCGATTGGGATCGAGGCCGATCCCGCCGAGGCGGCGCTGCTCCCCCCTGCCCCGTCGCCGCAGCCGGCGGAGGCGGAGGCGGAGGCCGCGGGGCCGGCGTCGCTGCCGTCGTCTATGCAGGCGGAGGGAAGCAAGCGGCGCGTGAGGAAGCGCGACCCGCGGCTGGTTTGCCCGAACTACCTCGCCGGGAGGGTGCCGTGCGCGTGCCCCGAGATTGACGAGATGGCGGCCGCCTTGGAGGTCGAGGACGTGGCCACAGAGTTGCTGGCAGGGGCGCGGAAGAAGCCGAAGGGTGCCGGCCGTGGTAGTGGTGCGGCAGTCGGCGGAAGTGGTGGAGGGGCTAGCCGTGGGACACCGGCCGAGATGAAGTGCCAGGTGCCTGGTTGTGAGGCGGACATACGTGAGCTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCACGCCGCCGCTGTCATGCTTGATGGTGTCCAGAAGCGCTATTGCCAGCAGTGTGGCAAGTAAGGCTCCATTTCCTCATTCCAGGCTGCTTTATGAACTTGTGGAAGATCCATTGGGATCAGTAGCAGTAGGAGGGATAATTAAGTGCTTTAACACTTATACAATCATTGTTGCTATATGATTTGGTGTTTAATGCATTATACCTTTTCTAGAATATAGTGGCTGTTGGATATGATATTTGGTCATTTCATAGAAAAAAAAACATTTACACACTCGAGAGTCTAAGTGGAGTGTTTGCTCAAATTATGCATGACGATTCATTTAATTAATTTATTCTGAGAATGGTTCTTTAGGATTGGACTGTTCTCAACATGTCTTTGTAGCAATGGTATCTGATCGTCCGATTAACCGCGATCAATCATCCTGACCGGTCCTCTGACTTCTGATCAGGGACATTAACTCAATCAGCTCAATCAGAATCTGATGATAAATCAGCGATTCATCATCCGATTATGCTAGGTAACAATTAATTTCAGTAGGAGTTTTGGGCTGCATGCGAAGTTGGGCCTCAGCAGTATTGTGCCGGCCCATTCCCATAGGGTTTACCGGTTTAGTCCCCTAGAAGCTGTCACAAATAAAAACTAACAAGTAAGCAACCATCTAACCATCAAATATTTCCTTTATGATTGCTTATACTATGCACTATATATACATTATCGATTAGCCTCGATTAATTGGCCTGATTGACCTGATCGGTGCCTTGGCGATCAGGGTCGATCAGACGATCAGATAACATTGCTTTGTAGTTTTAACTATATTGAAATCTACCAACTTTACATTTTCTTAGAATTTTTCGTTTCCTCTGCTAGGCTATATTATGTGGTGTACATAATTTGCTGTATGACTGTATTAATATAGTTTTGTTCAATTGAGAAGATGGGTTTTCTATTTTGTACTTTTTCTTGAGGTACCAATTACGGGTTGCTTAACTGGTTTTTTTCTGGGGGGTGGGGGGTCAAAATATTCAGGTGGAGCCTTATGATTGGTTGGAGCTAACATATAAATTTACACTAGTTCCATTTCCATGCAGAATCAGTTTGTTACTGATGGATGGTCGCTAAACTTTCTAAAAATTGCATGCCAAGCTCATTTGCAATAAAGCTAAGTCTTTTATTTCCAAATCAAATTCATATTTAAAGTTTGATTAATCTCATAAACTAAGGAACATCCTGCTTTAATGCATAAATTTTCTTGTATGTTTTTGACATGACGTAAGGTCACTGATCAAACAAACTGCAAGCATGGAAGTACCTCTGTCCTTGTGCATCTGTCCACAACCTGTTGGCCACTTGATATATTTTTGAAACATTACTTTAGCAATTGTTCAAAATTCTTTGCCTAGCTCGAGGTACTAACCTAAACCTCTTTGCTGTTGACTATGGTTGTGGCGATCTAACAGCTGTCCTGGGCTCCTGGCTGTATATATTGTTTTTCTACTAGCAGTTTAATTTTTGTGTGCTAACACTATTCTCTCTCTTAATATATTTCTGCTGCAGGTTTCATATATTACTAGATTTCGATGAAGATAAAAGGAGTTGTAGAAGGAAATTGGAGCGGCACAACAAAAGAAGACGAAGAAAACCTGATTCCAAAGGCATATTGGAGAAAGATATAGATGACCAGTTGGATTTTTCAGCAGATGGTAGTGGTGATGGTGAACTAAGAGAAGGTAGATATTTCAAAGAAAACCGCCTTTATTTTTTAATATGTTTGCTCTGTTATAAGTTTTTCTATTTGAAGTTGAACACAAAAGGTTTTAGTGATGTATTTAGACCAACTATGAGTGGTAAATTTGACTTGGCTGTTTCCAGAGCATTTTACGAAAGAGGTGCTCTGGATATTTTTTTTGCCTAGCAAATATGGCATTCATTGTTTTGATATAACTTCATTGGCAAGGTTTCATGGAATATTTGGGATCATGAGTTCTCTGTTTGTGATACCTACTCAACCGAGCAAACCCTTGATCTGATCCAGATACATAATTGACTCTTAACAAGATGAGCCTGTTTACTTCTGTTGTCTATGCATTTTCTCCAGACATGCTGGAAGTTCTCTGCTGTCTAGTCTGGAACATATTTGTTAACCAATCATTTCTTTAACAGAGAACATAGATGTCACTACCAGTGAGACGCTTGAGACTGTTCTGAGCAATAAGGTTTTGGACAGGGAAACACCTGTGGGTTCCGATGATGTGCTTAGTTCTCCAACATGTGCACAACCCAGTTTGCAAATCGACCAAAGTAAAAGCTTAGTGACTTTCGCTGCTTCTGTTGAAGCCTGCCTTGGCACTAAACAGGAAAACACCAAACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGGTAAGCGCTTCTCCTTGTGTACATATTATTCTGTAATATATAATTATTTTCTGTTCTTGCTCTCTCTAAAGGTTATTAGTAATGTTGTATCATCCATTGTAGTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTCCTCGACGCTTACGCCACCAAGTATATAACCAGGCTCTAAGTTTCTCAATAGCACGCTGTTTTCATGCCCAAAAGATTGTTCTGAACTCAATGCCATACGTAAAATATGCAGATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGGGCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAGGTATGGATGCTTGTACTAAAATGCCAAATCATTACTTAGTCCAAAGGAGGACATTTTTTTGGATGCATCCAAATGAAGACCTACCAAATATTGGTCTTTCAATTCCATGTCCATGTTTTACAGTTCAAACAATTTTGAGCTGCTAATTTTTATACCACATCCAGTTCAAAATATATATCTCTATGGTATGCAAATGTATTTTTACCACTTATGAACAATTACATAGTTGTGGAGTGTAATGAGTGCCCACTTGTGGCATGTAAAGTGTAATTAGAATTTCCCACAAAGTGAACTGAATGGACTTGTTGTATGGAAGTCAATAATACTATTTTTTTTCTTTTACAAGATAGCATTTATATCTGCATTTCTTTACAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCTCCTGTTGGGTAAAGGGGCCTTCTTTATCCATGTCAATAATATGATATTTCAAGTATTGAAAGGTGTGTACCACATGTCCTGTTTTTCCATGACGTGATAACAACATAACCTTCTTGTTTATACATCATATATTTGTACTTAAGCTGCATTGTTCCTGCATAAGAGACACTATACAGTAGATTGATACCAATCATAGCCTCACTACTACAATTACTATCTGCAGTTTCAGTATCACTTGCAAAATCAATATTAGTTGCATACGCTAAATTCGATGCATAATTTTGAACTTGTATCATTTAATTGCTAGCTTATTATATCTTTTGTTTTTATGAGATAATTACCTTACCTGATTGAGAATATTAACTGCTGTACTTCAGATGGTGCAACATTGACCAGTACCAGATTAGAGGTACAGTCCCCGAGGATTCACTATGTTCATCCATCATGGTTTGAAGCAGGAAAGCCCATCGATCTTATTCTTTGTGGAAGTTCTCTTGATCAGCCTAAATTCAGGTATGACAGTTCCTTGTACCTTCTACCTGTTTCTGCTGGTTATTCTTCTGTCAGGATACATTATGTTCAGTTTAGCTATGGTGATATATTCATATCATTACCTGAGAGATACTATATCTCAACGCAGATCCTGTAGGAATAAGTCTTGGTCTTGGTCTTGTGGTGCTTTTTCTTGCTTTTTAGCTCTAGGACAGCATCTCTACTTTCAGTTTGGATGCTCTAGGACAGCTAGGACAGCAGTTTGTTGAGATGCTCTAGGACAGTTTGTTGGGATGCTCTAGGACAGCACCCACTTGCCCTAGCATGGCTGCTACAAGCAGCTATAAATATGTATCCAATCCTCTTTGGGAGGATATGGCTTTTGAGTTTGTGAATGAAGAAAACCAGAAAATTGCCCCACTCTGAGTGCCATCCTCTTCTCAATGAGAGTAACCATTGAAATTCGAACAGAACCTTGATGCCACCTTTCCATTGTCTATGAAATGGAGTTCAACCATTAAATTTTATTGCAAATATTTTATAGAAGCTAATATGAATAAAAAAGGTTGCCCATGGTGACAATAGTTTCTTACTATAGAGGGGGAGTAGTGAATTTTTGGAAAGGTGTTGATTCAGGAGGTGTTCTTTATTTGTCTATCTGTGCATGCTTGATTTTGATGTTTTTAACAATACAAGCAAGTGGGGAGGGGGAAAGGATGATTAAAACCATTCTTTAGATGCCCTTGGTTGCGTTGTAACTCTCTCAGTGATAGAATGCCCTTGGTTGCGTTGTAACTCTCTCAGTGATGGCTACAATCGTATTTTTGCCTATTCCCTCAGCTTGGAGAAATAACTAAATGAATATGAGTGCAATGTGATATCCAGTACGCAATTTATTTCATTTTTTGATCATGTTCCATGCACAAACTTGCTAGGCGTCAGTGGTTACTGCATGAAATAGAAGTAGTGGCTAACCAATGATAACATGAAACCGCATTAGTGGATCAGGAAGATTTTAGTATGGTCATACTCTGTGTGTTAACTTCTATTTTATGGATTGTATTTTGAGTAAAGTCCATCACTGGTCCCTACACTTGTACCGTTGTGTCATTCCGGTCCCTAAACTCGCAAATCGATCGTTCAGGTCCTCAAACTTGTTCGACTGTGTCATACCGGTCCCTAAACTTGTAGATCACTTGTTTAGGTCCTATCCAACTTGTTCAGTTGTGTCACCCCGGTCCCTAAACTTGGATTTGAATATCATCTTGGTCAAATAGGACGGTCTAAAGACTTTATATTTAAAAATAATTCATAACTTTTTCATGTGAACTCTAATGAAGACAAACTTTATATCAAACTTGTAGCCCTCGACGCGATCTACAACTTTGTAGTTGATTTCGTGATCTACAACTTTGTAGTTGATTTTTTTTTATTTTAAGTCACTTTTTGTCCCAAAATGTAATTTTAAAATTAAAATTTCAAAATCTATAAACATGCAACAATATTTTGGGACACTAAACAGTTTTAATTCAAAAAATTTTCAACTACAAAGTTGTAGGTCGCGTCGAGGGCTACAATTTTCATATAAAGTTTGTCTTCATTAGAGTTCACATGAAAAATTTATGAATTATTTTTTGATGTAAAGTTTTTAGACCGTCCTGTTTAGGGACCAGAGTGACACAAGTGAACAAGTTTGAGGACCGTGATCTGTAAGTTTACGGACCGGGATGACACAGTCGAACAAGTTTGAGGACCTGAACAGTCGATTTGTGAGTTTAGGGACCGTGATGACACAACGTTACAAGTTTAGGGACCGGTGATAGACTTTACTCTTGTATTTTTCCCATTTATAACTTAATTGCGCCATGACAGCCATGGTTCATGGGTATTTGTTTAAGTATCCAGAAATTGAATCCACACAGAGATCTCTCGCTTGTGTGGATTATGCTGCAGTTGCAACAATGGCTGTGGCTGCAGCTACAGTACAAGCAGCACAGATTATGCTGCAGTTGCGGCAATCTCTTCCCAACATCCCCATAGTCTATAACCTTATTCTTGTAGACAAGTTCTTTCTTAGCCGGCAGCTGTCTATGCTCTTGCTAGGTGTTTTGAATGCCTTACAGGTGTTTTGAGTACCTCTGAATATTTGTAATCATGGCAGGTCACTTGTGTCATTTGATGGACTGTACTTGAAGCATGATTGTCGCCGTATACTGTCACATGAGACCTTTGATTGTATTGGAAGTGGGGAACATATACTTGATTCTCAACATGAAATATTCCGGATAAATATTACCACATCAAAGCTGGATACTCATGGACCCGCATTTGTGGAAGTAAGTATCTGTTACCTTTGACTAAACCGGTAAAATTCTCTTTCAGGGTCTGCATATTAATTTACACCTTTTTTTTCTCTATTGACACCAATTTAGCTTGCACACAATTGGCTTCAATGCTTTCTATTGTCTAGGGCACGTAGTGATTAGTGTGCTTAAGTTTGTGTAATGCTCTGTACAGTATTGGTTCTTGGCCACTTCACAAAATTGATTGAGATCTTTTTAGGCAGCTTAAGTGTGAACCATCTGAAATAGTGTGTTATTTTAGTAGAATCTAGAATGAACAATCAATGCACATAAGCAATCATTTGCTCTGTGCACTGTAATGTAGAATGTGAACTTGCCAAATGTTCTGCAAACATATGATTTGTATGCAATTAGCCAAAAAAGGTGTTCGTGCAAAAAGGACAAAAAATATTTTCAAAATATGACCAAATAGTTGACAGACCACACTTATTTTTGAAATCAAGTTGTCACCCTTTGACATTTCTGTAGTTCTATATGATGACCGCAGTTCTATGATTTTATTTTGCAGGTGGAAAACATGTTTGGGCTATCAAATTTTGTTCCTATCCTTGTTGGTAGCAAGCATTTATGTTCTGAACTAGAGCAGATACATGATGCTCTGTGTGGTTCTTCGGACATAAGTTCTGATCCTTGTGAGCTTCGAGGACTTCGACAGACTGCAATGTTGGGATTCCTCATCGACATTGGATGGCTAATAAGGAAGCCATCCATAGATGAATTTCAAAACCTACTGAGTTTAGCAAATATCCAGAGATGGATATGCATGATGAAATTCCTGATACAGAACGATTTTATCAATGTTCTGGAAATAATAGTGAACTCGTTGGACAACATCATAGGGTCAGAGCTTCTTTCTAACTTGGAAAAGGGTAGACTGGAAAATCATGTAACAGAATTTCTTGGGTATGTAAGCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAGTAAGTGATCGTGTTACACGCTAATTATCAATGACAATGAAAGTGACACTATTCTTCATATTGCTCTCAGCCTTTTCTAATTGACATATATAAATTAATAGAACTAGAAAACCTAGCTTCATGCTCTAGTAAAAAAGTTGTCAGGATGATATTTGGCTTGAAACTGGCATTCCACACATGCAAGTCCGTGTACAAAATATGTATGTCTCTGAGTTTTTGTTTGCTAGAGTTATTAGTTATTATATGCCCTTTTTATTGTGAAGTTTCTTTTTCTACTGGTTCATATTTGGTAATGGACCTTGCAAAAAAAATCTGGTAAAGGAAAAAGCTATACTACAAATAAATAATTCGTTACATTTTTTTTACAAACCCTGATGTGGCACGCTATTATTGAATCTTGATTTTATAACTTCCAACTAATTAAATTGAAATATCGAGAACTTTGTTAGTAAGAATTTATTAGTATGTATAGCACTACTTTTCGCCATAATTTATTAGTATGTATCCACAATTCATCCGATCGTTAGCATCTCTCGTTTGATTCAAGATCTTAATCCTGATTACTTTTGAGTTCGGATTAGCTTTTTTTCACTGTTGATTGAATCCTGGGAGTTGTATGGGAGGGACCCTGGCTTTATGAAGTGTTAAAACGACATAACAACATTAGTGTTGCATTTACACTTTATTTGTTTTCTTTTTGTATCGCATACTTTTGTCTCCTTATGTCTGGCAGACTACTGAAGTGTTTGGAACCTTTCTGCAGAGTACTGGAACCAGTGGAGAACATGATTTGCACTCAACCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGACTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCACCACTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCACACAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTACCTTTCTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATTTGTAAGAGGACCCACAGGCATAAATGCAAATTTTTGCAGCTTTTTTTGGC
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| CDS seq | ATGGACGCCCCCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGAGGTGGGGTGGATGCCGGCGAGCCCGTCTGGGACTGGGGGAACCTCCTCGACTTCGCCGTCCATGACGACGACTCGCTGGTCCTCCCGTGGGGGGACGATTCGATTGGGATCGAGGCCGATCCCGCCGAGGCGGCGCTGCTCCCCCCTGCCCCGTCGCCGCAGCCGGCGGAGGCGGAGGCGGAGGCCGCGGGGCCGGCGTCGCTGCCGTCGTCTATGCAGGCGGAGGGAAGCAAGCGGCGCGTGAGGAAGCGCGACCCGCGGCTGGTTTGCCCGAACTACCTCGCCGGGAGGGTGCCGTGCGCGTGCCCCGAGATTGACGAGATGGCGGCCGCCTTGGAGGTCGAGGACGTGGCCACAGAGTTGCTGGCAGGGGCGCGGAAGAAGCCGAAGGGTGCCGGCCGTGGTAGTGGTGCGGCAGTCGGCGGAAGTGGTGGAGGGGCTAGCCGTGGGACACCGGCCGAGATGAAGTGCCAGGTGCCTGGTTGTGAGGCGGACATACGTGAGCTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCACGCCGCCGCTGTCATGCTTGATGGTGTCCAGAAGCGCTATTGCCAGCAGTGTGGCAAGTTTCATATATTACTAGATTTCGATGAAGATAAAAGGAGTTGTAGAAGGAAATTGGAGCGGCACAACAAAAGAAGACGAAGAAAACCTGATTCCAAAGGCATATTGGAGAAAGATATAGATGACCAGTTGGATTTTTCAGCAGATGGTAGTGGTGATGGTGAACTAAGAGAAGAGAACATAGATGTCACTACCAGTGAGACGCTTGAGACTGTTCTGAGCAATAAGGTTTTGGACAGGGAAACACCTGTGGGTTCCGATGATGTGCTTAGTTCTCCAACATGTGCACAACCCAGTTTGCAAATCGACCAAAGTAAAAGCTTAGTGACTTTCGCTGCTTCTGTTGAAGCCTGCCTTGGCACTAAACAGGAAAACACCAAACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTCCTCGACGCTTACGCCACCAAATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGGGCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCTCCTGTTGGGTAAAGGGGCCTTCTTTATCCATGTCAATAATATGATATTTCAAGTATTGAAAGATGGTGCAACATTGACCAGTACCAGATTAGAGGTACAGTCCCCGAGGATTCACTATGTTCATCCATCATGGTTTGAAGCAGGAAAGCCCATCGATCTTATTCTTTGTGGAAGTTCTCTTGATCAGCCTAAATTCAGGTCACTTGTGTCATTTGATGGACTGTACTTGAAGCATGATTGTCGCCGTATACTGTCACATGAGACCTTTGATTGTATTGGAAGTGGGGAACATATACTTGATTCTCAACATGAAATATTCCGGATAAATATTACCACATCAAAGCTGGATACTCATGGACCCGCATTTGTGGAAGTGGAAAACATGTTTGGGCTATCAAATTTTGTTCCTATCCTTGTTGGTAGCAAGCATTTATGTTCTGAACTAGAGCAGATACATGATGCTCTGTGTGGTTCTTCGGACATAAGTTCTGATCCTTGTGAGCTTCGAGGACTTCGACAGACTGCAATGTTGGGATTCCTCATCGACATTGGATGGCTAATAAGGAAGCCATCCATAGATGAATTTCAAAACCTACTGAGTTTAGCAAATATCCAGAGATGGATATGCATGATGAAATTCCTGATACAGAACGATTTTATCAATGTTCTGGAAATAATAGTGAACTCGTTGGACAACATCATAGGGTCAGAGCTTCTTTCTAACTTGGAAAAGGGTAGACTGGAAAATCATGTAACAGAATTTCTTGGGTATGTAAGCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAAGTACTGGAACCAGTGGAGAACATGATTTGCACTCAACCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGACTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCACCACTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCACACAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAG
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| Protein seq | MDAPGGGGGGGGGGGGVDAGEPVWDWGNLLDFAVHDDDSLVLPWGDDSIGIEADPAEAALLPPAPSPQPAEAEAEAAGPASLPSSMQAEGSKRRVRKRDPRLVCPNYLAGRVPCACPEIDEMAAALEVEDVATELLAGARKKPKGAGRGSGAAVGGSGGGASRGTPAEMKCQVPGCEADIRELKGYHRRHRVCLRCAHAAAVMLDGVQKRYCQQCGKFHILLDFDEDKRSCRRKLERHNKRRRRKPDSKGILEKDIDDQLDFSADGSGDGELREENIDVTTSETLETVLSNKVLDRETPVGSDDVLSSPTCAQPSLQIDQSKSLVTFAASVEACLGTKQENTKLTNSPVHDTKSTYSSSCPTGRVSFKLYDWNPAEFPRRLRHQIFEWLSSMPVELEGYIRPGCTILTVFVAMPQHMWDKLSEDTGNLVKSLVNAPNSLLLGKGAFFIHVNNMIFQVLKDGATLTSTRLEVQSPRIHYVHPSWFEAGKPIDLILCGSSLDQPKFRSLVSFDGLYLKHDCRRILSHETFDCIGSGEHILDSQHEIFRINITTSKLDTHGPAFVEVENMFGLSNFVPILVGSKHLCSELEQIHDALCGSSDISSDPCELRGLRQTAMLGFLIDIGWLIRKPSIDEFQNLLSLANIQRWICMMKFLIQNDFINVLEIIVNSLDNIIGSELLSNLEKGRLENHVTEFLGYVSEARNIVDNRPKYDKQRQVDTRWAGDYAPNQPKLGISVPLAESTGTSGEHDLHSTNAASGEEENMPLVTKALPHRQCCHPETSARWLNAASIGAFPGGAMRMRLATTVVIGAVVCFAACVVLFHPHRVGVLAAPVKRYLSRNYSS |
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| Function | Squamosa promoter-binding-like protein 9 [UniProtKB/Swiss-Prot:Q6I576] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_05g0408200 | OsNip_05t0408200-01 | Chr05 | 19923167 | 19932333 | + | RAP2018-11-26 | ||
| CDS seq | ATGGACGCCCCCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGAGGTGGGGTGGATGCCGGCGAGCCCGTCTGGGACTGGGGGAACCTCCTCGACTTCGCCGTCCATGACGACGACTCGCTGGTCCTCCCGTGGGGGGACGATTCGATTGGGATCGAGGCCGATCCCGCCGAGGCGGCGCTGCTCCCCCCTGCCCCGTCGCCGCAGCCGGCGGAGGCGGAGGCGGAGGCCGCGGGGCCGGCGTCGCTGCCGTCGTCTATGCAGGCGGAGGGAAGCAAGCGGCGCGTGAGGAAGCGCGACCCGCGGCTGGTTTGCCCGAACTACCTCGCCGGGAGGGTGCCGTGCGCGTGCCCCGAGATTGACGAGATGGCGGCCGCCTTGGAGGTCGAGGACGTGGCCACAGAGTTGCTGGCAGGGGCGCGGAAGAAGCCGAAGGGTGCCGGCCGTGGTAGTGGTGCGGCAGTCGGCGGAAGTGGTGGAGGGGCTAGCCGTGGGACACCGGCCGAGATGAAGTGCCAGGTGCCTGGTTGTGAGGCGGACATACGTGAGCTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCACGCCGCCGCTGTCATGCTTGATGGTGTCCAGAAGCGCTATTGCCAGCAGTGTGGCAAGTTTCATATATTACTAGATTTCGATGAAGATAAAAGGAGTTGTAGAAGGAAATTGGAGCGGCACAACAAAAGAAGACGAAGAAAACCTGATTCCAAAGGCATATTGGAGAAAGATATAGATGACCAGTTGGATTTTTCAGCAGATGGTAGTGGTGATGGTGAACTAAGAGAAGAGAACATAGATGTCACTACCAGTGAGACGCTTGAGACTGTTCTGAGCAATAAGGTTTTGGACAGGGAAACACCTGTGGGTTCCGATGATGTGCTTAGTTCTCCAACATGTGCACAACCCAGTTTGCAAATCGACCAAAGTAAAAGCTTAGTGACTTTCGCTGCTTCTGTTGAAGCCTGCCTTGGCACTAAACAGGAAAACACCAAACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTCCTCGACGCTTACGCCACCAAATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGGGCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCTCCTGTTGGGTAAAGGGGCCTTCTTTATCCATGTCAATAATATGATATTTCAAGTATTGAAAGATGGTGCAACATTGACCAGTACCAGATTAGAGGTACAGTCCCCGAGGATTCACTATGTTCATCCATCATGGTTTGAAGCAGGAAAGCCCATCGATCTTATTCTTTGTGGAAGTTCTCTTGATCAGCCTAAATTCAGGTCACTTGTGTCATTTGATGGACTGTACTTGAAGCATGATTGTCGCCGTATACTGTCACATGAGACCTTTGATTGTATTGGAAGTGGGGAACATATACTTGATTCTCAACATGAAATATTCCGGATAAATATTACCACATCAAAGCTGGATACTCATGGACCCGCATTTGTGGAAGTGGAAAACATGTTTGGGCTATCAAATTTTGTTCCTATCCTTGTTGGTAGCAAGCATTTATGTTCTGAACTAGAGCAGATACATGATGCTCTGTGTGGTTCTTCGGACATAAGTTCTGATCCTTGTGAGCTTCGAGGACTTCGACAGACTGCAATGTTGGGATTCCTCATCGACATTGGATGGCTAATAAGGAAGCCATCCATAGATGAATTTCAAAACCTACTGAGTTTAGCAAATATCCAGAGATGGATATGCATGATGAAATTCCTGATACAGAACGATTTTATCAATGTTCTGGAAATAATAGTGAACTCGTTGGACAACATCATAGGGTCAGAGCTTCTTTCTAACTTGGAAAAGGGTAGACTGGAAAATCATGTAACAGAATTTCTTGGGTATGTAAGCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAAGTACTGGAACCAGTGGAGAACATGATTTGCACTCAACCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGACTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCACCACTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCACACAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAG
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| Protein seq | MDAPGGGGGGGGGGGGVDAGEPVWDWGNLLDFAVHDDDSLVLPWGDDSIGIEADPAEAALLPPAPSPQPAEAEAEAAGPASLPSSMQAEGSKRRVRKRDPRLVCPNYLAGRVPCACPEIDEMAAALEVEDVATELLAGARKKPKGAGRGSGAAVGGSGGGASRGTPAEMKCQVPGCEADIRELKGYHRRHRVCLRCAHAAAVMLDGVQKRYCQQCGKFHILLDFDEDKRSCRRKLERHNKRRRRKPDSKGILEKDIDDQLDFSADGSGDGELREENIDVTTSETLETVLSNKVLDRETPVGSDDVLSSPTCAQPSLQIDQSKSLVTFAASVEACLGTKQENTKLTNSPVHDTKSTYSSSCPTGRVSFKLYDWNPAEFPRRLRHQIFEWLSSMPVELEGYIRPGCTILTVFVAMPQHMWDKLSEDTGNLVKSLVNAPNSLLLGKGAFFIHVNNMIFQVLKDGATLTSTRLEVQSPRIHYVHPSWFEAGKPIDLILCGSSLDQPKFRSLVSFDGLYLKHDCRRILSHETFDCIGSGEHILDSQHEIFRINITTSKLDTHGPAFVEVENMFGLSNFVPILVGSKHLCSELEQIHDALCGSSDISSDPCELRGLRQTAMLGFLIDIGWLIRKPSIDEFQNLLSLANIQRWICMMKFLIQNDFINVLEIIVNSLDNIIGSELLSNLEKGRLENHVTEFLGYVSEARNIVDNRPKYDKQRQVDTRWAGDYAPNQPKLGISVPLAESTGTSGEHDLHSTNAASGEEENMPLVTKALPHRQCCHPETSARWLNAASIGAFPGGAMRMRLATTVVIGAVVCFAACVVLFHPHRVGVLAAPVKRYLSRNYSS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 7.676692 | 9.227110 | 7.110740 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g33810 | RBH | 5.076299 | 6.099107 | 1.784801 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0408200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0016880 | RBH | 1.572149 | 25.139751 | 11.615395 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0016880 | RBH | 0.396276 | 2.833090 | 4.710594 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0016670 | RBH | 2.989499 | 17.970642 | 13.771858 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0016710 | RBH | 0.642863 | 0.591381 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0016910 | RBH | 20.915276 | 10.876795 | 23.551647 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0305500 | RBH | 12.082456 | 24.4763155 | 25.880229 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0016410 | RBH | 0.909950 | 1.534126 | 1.926120 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0314900 | RBH | 13.9402645 | 34.145258 | 20.3518735 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0016730 | RBH | 0.587406 | 0.317854 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0016650 | RBH | 1.418684 | 9.527214 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0016760 | RBH | 14.196219 | 20.887341 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0016780 | RBH | 2.023299 | 2.359406 | 2.010949 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0016850 | RBH | 0.647214 | 13.855865 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G016300 | RBH | 1.594944 | 5.613255 | 5.521415 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0016610 | RBH | 3.107563 | 54.398727 | 13.904902 |
