Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsNip_05g0135200 | OGI:05005940 | 11/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr05:2061827-2063241 | ||||||||
Gene Symbol | prx69 | ||||||||||
DNA seq | CCTAGTCACCTTCACTTGATCAGTTAGACTCCTCGTCTAGCTGAGCTATCTAGAAGAGATAGTTTGTGTGTGTGTGTGTGCTCGATGGCCGCCGGTAGCAGAGACGGCGGTGCTCGCCGCCGATCGTGTAGTGTGCTCGTCGCTGCTGCGGCGATCTTCTTTGGTTACGCGGCGACGGCGGCGGGGCTGCAGGTGGGCTACTACAACAACTCATGCCCCGGAGCTGAGGACCTGATTCAGACGATCGTCCATGGCGCCGTCCGCAACGACGCCGGCAATGGCCCCGGCCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCAGGGTCAGTGATACTGATATCGCATTGCGGTTAATTTGGTTGAATTCACTTGGTCGAATTTGGTTGAGCTGATGATCGAGAGGTGTTCGATGCAATGCGAATGTGTACGTAGGGGTGCGACGCGTCGGTGCTGCTCGACGCCGACCCGGCGAGCAACGGCACGGTGGAGAAGATGGCGCCGCCCAACTTCCCCAGCCTGCGCGGCTTCGGCGTCATCGACCGCGCCAAGCGCGTCGTGGAGCGGCGCTGCCCGGGCGTGGTCTCCTGCGCCGACATCGTCGCGTTCGCGGCGCGCGACGCGTCGCGCATCATGGGCGGGATCAAGTTTGCCATGCCCGCCGGCCGCCTCGACGGCCGCGTCTCGAGCGCGTCCGAGGCGCTCGCCAACCTGCCCCCCGGGTCGTTCAACCTCACCCAGCTCGTCGCCCGCTTCGCCACCAAGAACCTCACCGCCGACGACATGGTCACCCTCTCCGGCGCCCACTCCATCGGCCGCTCCCACTGCTCCTCCTTCTCCTCCCGCCTCTACCCGCAGATCGACCCCGCCATGAACGCCACGCTCGGCGTCCGCTCGCGCGCCAAGTGCGCCGCGGCGCCGGGGCGCCTCGACCGCGTCGTGCAGCTCGACTTCAAGACGCCGCTGCAGCTGGACAACCAGTACTACCAGAACGTGCTGACGCACGAGGTGGTGTTCACGTCGGACCAGTCGCTGATCGACCGCCCCGACACGGCGGCGCTGGTGGCGCAGTACGCCGGCAGCCGGAAGCTGTGGTCGCAGAAGTTCGCCGCCGCCATGGTCAAGATGGGCAACCTCGACGTGCTCACCGGCCCACCCGGCGAGATCCGGCAATACTGCAACAAAGTGAACTAATTATATTTAAAAAAAATCGATCGATATTCAATCCAACCATGCACGCACTTCGATACTGCTTGATTGATTGATTATTGTACATGACATGATCAGCAAAATTTCATCGAAAAATTCAACATCACCTTCGATTTCATGCTGCTTCACACAATGATCATGTGTACTTGATGACATTGTTGTAAGTTGTAACATAAGAGAGGGTAGAATTATCACATCGGCATTTGTT
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CDS seq | ACTCCTCGTCTAGCTGAGCTATCTAGAAGAGATAGTTTGTGTGTGTGTGTGTGCTCGATGGCCGCCGGTAGCAGAGACGGCGGTGCTCGCCGCCGATCGTGTAGTGTGCTCGTCGCTGCTGCGGCGATCTTCTTTGGTTACGCGGCGACGGCGGCGGGGCTGCAGGTGGGCTACTACAACAACTCATGCCCCGGAGCTGAGGACCTGATTCAGACGATCGTCCATGGCGCCGTCCGCAACGACGCCGGCAATGGCCCCGGCCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCAGGGGGTGCGACGCGTCGGTGCTGCTCGACGCCGACCCGGCGAGCAACGGCACGGTGGAGAAGATGGCGCCGCCCAACTTCCCCAGCCTGCGCGGCTTCGGCGTCATCGACCGCGCCAAGCGCGTCGTGGAGCGGCGCTGCCCGGGCGTGGTCTCCTGCGCCGACATCGTCGCGTTCGCGGCGCGCGACGCGTCGCGCATCATGGGCGGGATCAAGTTTGCCATGCCCGCCGGCCGCCTCGACGGCCGCGTCTCGAGCGCGTCCGAGGCGCTCGCCAACCTGCCCCCCGGGTCGTTCAACCTCACCCAGCTCGTCGCCCGCTTCGCCACCAAGAACCTCACCGCCGACGACATGGTCACCCTCTCCGGCGCCCACTCCATCGGCCGCTCCCACTGCTCCTCCTTCTCCTCCCGCCTCTACCCGCAGATCGACCCCGCCATGAACGCCACGCTCGGCGTCCGCTCGCGCGCCAAGTGCGCCGCGGCGCCGGGGCGCCTCGACCGCGTCGTGCAGCTCGACTTCAAGACGCCGCTGCAGCTGGACAACCAGTACTACCAGAACGTGCTGACGCACGAGGTGGTGTTCACGTCGGACCAGTCGCTGATCGACCGCCCCGACACGGCGGCGCTGGTGGCGCAGTACGCCGGCAGCCGGAAGCTGTGGTCGCAGAAGTTCGCCGCCGCCATGGTCAAGATGGGCAACCTCGACGTGCTCACCGGCCCACCCGGCGAGATCCGGCAATACTGCAACAAAGTGAACTAA
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Protein seq | TPRLAELSRRDSLCVCVCSMAAGSRDGGARRRSCSVLVAAAAIFFGYAATAAGLQVGYYNNSCPGAEDLIQTIVHGAVRNDAGNGPGLIRLFFHDCFVRGCDASVLLDADPASNGTVEKMAPPNFPSLRGFGVIDRAKRVVERRCPGVVSCADIVAFAARDASRIMGGIKFAMPAGRLDGRVSSASEALANLPPGSFNLTQLVARFATKNLTADDMVTLSGAHSIGRSHCSSFSSRLYPQIDPAMNATLGVRSRAKCAAAPGRLDRVVQLDFKTPLQLDNQYYQNVLTHEVVFTSDQSLIDRPDTAALVAQYAGSRKLWSQKFAAAMVKMGNLDVLTGPPGEIRQYCNKVN |
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Function | Peroxidase 2 [UniProtKB/Swiss-Prot:Q9FEQ8] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsNip_05g0135200 | OsNip_05t0135200-01 | Chr05 | 2061827 | 2063241 | + | RAP2018-11-26 | ||
CDS seq | ACTCCTCGTCTAGCTGAGCTATCTAGAAGAGATAGTTTGTGTGTGTGTGTGTGCTCGATGGCCGCCGGTAGCAGAGACGGCGGTGCTCGCCGCCGATCGTGTAGTGTGCTCGTCGCTGCTGCGGCGATCTTCTTTGGTTACGCGGCGACGGCGGCGGGGCTGCAGGTGGGCTACTACAACAACTCATGCCCCGGAGCTGAGGACCTGATTCAGACGATCGTCCATGGCGCCGTCCGCAACGACGCCGGCAATGGCCCCGGCCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCAGGGGGTGCGACGCGTCGGTGCTGCTCGACGCCGACCCGGCGAGCAACGGCACGGTGGAGAAGATGGCGCCGCCCAACTTCCCCAGCCTGCGCGGCTTCGGCGTCATCGACCGCGCCAAGCGCGTCGTGGAGCGGCGCTGCCCGGGCGTGGTCTCCTGCGCCGACATCGTCGCGTTCGCGGCGCGCGACGCGTCGCGCATCATGGGCGGGATCAAGTTTGCCATGCCCGCCGGCCGCCTCGACGGCCGCGTCTCGAGCGCGTCCGAGGCGCTCGCCAACCTGCCCCCCGGGTCGTTCAACCTCACCCAGCTCGTCGCCCGCTTCGCCACCAAGAACCTCACCGCCGACGACATGGTCACCCTCTCCGGCGCCCACTCCATCGGCCGCTCCCACTGCTCCTCCTTCTCCTCCCGCCTCTACCCGCAGATCGACCCCGCCATGAACGCCACGCTCGGCGTCCGCTCGCGCGCCAAGTGCGCCGCGGCGCCGGGGCGCCTCGACCGCGTCGTGCAGCTCGACTTCAAGACGCCGCTGCAGCTGGACAACCAGTACTACCAGAACGTGCTGACGCACGAGGTGGTGTTCACGTCGGACCAGTCGCTGATCGACCGCCCCGACACGGCGGCGCTGGTGGCGCAGTACGCCGGCAGCCGGAAGCTGTGGTCGCAGAAGTTCGCCGCCGCCATGGTCAAGATGGGCAACCTCGACGTGCTCACCGGCCCACCCGGCGAGATCCGGCAATACTGCAACAAAGTGAACTAA
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Protein seq | TPRLAELSRRDSLCVCVCSMAAGSRDGGARRRSCSVLVAAAAIFFGYAATAAGLQVGYYNNSCPGAEDLIQTIVHGAVRNDAGNGPGLIRLFFHDCFVRGCDASVLLDADPASNGTVEKMAPPNFPSLRGFGVIDRAKRVVERRCPGVVSCADIVAFAARDASRIMGGIKFAMPAGRLDGRVSSASEALANLPPGSFNLTQLVARFATKNLTADDMVTLSGAHSIGRSHCSSFSSRLYPQIDPAMNATLGVRSRAKCAAAPGRLDRVVQLDFKTPLQLDNQYYQNVLTHEVVFTSDQSLIDRPDTAALVAQYAGSRKLWSQKFAAAMVKMGNLDVLTGPPGEIRQYCNKVN
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | 0.0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0294700 | SBH | 2.100928 | 3.311872 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g04470 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os05g0135200 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0002520 | SBH | 0.0 | 4.106256 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0002550 | SBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0002580 | SBH | 0.000000 | 28.085850 | 0.000000 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0002500 | SBH | 0.0 | 0.646670 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0002610 | RBH | 0.000000 | 32.967018 | 0.000000 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0030800 | SBH | 0.1384085 | 35.057227 | 0.0709745 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0004300 | SBH | 0.0 | 0.667396 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0030800 | SBH | 0.3328385 | 39.056498 | 0.050938 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0002530 | SBH | 0.0 | 0.740472 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0002451 | RBH | 0.0 | 43.552845 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0002560 | SBH | 0.0 | 80.981285 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0002600 | SBH | 2.021781 | 8.018285 | 6.478323 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0002630 | SBH | 0.416395 | 48.551849 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G002420 | SBH | 0.000000 | 7.565678 | 0.000000 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0002600 | SBH | 0.000000 | 0.000000 | 0.379309 |