Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_04g0488000 | OGI:04074160 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr04:24371795-24377651 | ||||||||
| Gene Symbol | CDKG;2, CDKG;2, Orysa;CDKG;2 | ||||||||||
| DNA seq | AGCCGACTCGAAACAACGCGAAGCGGCGCCTCTGACTCGCTTCCGTTCCCATCTCTTCCTCTCCCTACCTCGCTCCGCCGCCGCCGCTCCCCTCCCGACCCGCCTCGCTTCCTCCCTCCGCCGCCGCCGCCGCCGCCACGGCCCGGCCGGATCCCACCCGGCCGCTCGATTCGAGGTCAGATCCAAACCCCAGCCCTCCCAGGTCCGAATCGCGCCGAATTTTTTTCTAGGTTTTGGTACGGATCTAGGGTTTGGCTTGCCGTGGGAAATTTTCGTGGGGGGAATTCTGTCGAATTTCTCTCGGCTTCCACGGTCTGGTTGGATTCCTGCTCATGGCCGCTGGGCGCCACGGAGGATACAGGGACTACGAGGCAAGGGAGCGGGAGCTCGACGCGGAGGCTTCCAGGAGGAGCAAGGAGCAGCAGCACCACCACCACCCGAGCGGCCGACACCAACGCGGCGACTCCGACCCCCGCTGCGAAGCTGACCGGCGCCGTGACGGCGGTCGCAGCAGGGGCGGCAGGGAGTTGTCGAACGGGTACGGCCACCGCCGCTCTCCGCCTCCCAGGAGTCGCCTCTCAGCGAGGCTCGGGGATCGCGAGCCTGGCGAAGTTCTGAGCGGTAGTGCGTCAGATGACTCTGGTGGGAGGCCGCATAGAGCGAGGGAGAATGGTGTATCAAGTTCTAGTAGGGATGGTGAATCGGTGGTGGCTGCATCGGCCTCATCACCTAGCAAGAAAAGGAAATTCTCACCGATAATATGGGATAGGGATAGCCCAAAGCCAATGCATTCTGATGTGGCGAAGGGCAAGAAGGCGGTGGACTCTGTGCCTACCGAGCTTCCTCTCCCTCCCCCTCCCCCTCTGCCTCCGCAGGATCACATCCCTGAGAGGTTGGCTGTGGAGAAGTCGCCGATGGATGTGGAGCCTGCTGTTGCTTCCGAGAGTCCTGAGCAGTTACAGGAGCATGCGGAGAGTAGAGTGATGGAGGAGGAAGAAGAGTACTCAACAATGAGGAACATATCAACTTCAAGGTGGGCTGGTGCTAATGATGACGAGGAAGAGGGGGCACCACACAGGAAGAAGAAAAGTGCATCGCCTGCAGACTCTGCTGAGTTGGGGCAGAGGAAGAAGGCTCTTAGCCCAGAACTTGGTGAGGTTGTGGCCAGTGATATCTCTGGAGGGAGGACCATGTCAAGGTCGTCTGATTCAGGGAGGTTGGGTGCTGATGAGAATGAGGATTTGGAAGTTGATAAAGATGATTATATGGACGTTGACAGAGATGATGATGGTAACAGTGATATTGCAAATCATCAGTCAGGTATGGACTCAGAGTATGAAGTGCGCCGGTCTGAAACACCAGAACCAGTGAAGCCACCGCACAGATGTATAAATATGCTTCAAGGTTGCAGAAGTGTTGATGAATTTGAGAGGCTCAACAAGATTAATGAAGGCACCTATGGTGTTGTATACAGGGCAAGGGATAAGAAGACTGGTGAGATTGTTGCGTTGAAGAAGGTCAAGATGGAGAAGGAGAGAGAAGGTTTCCCATTAACATCTCTTAGGGAGATAAACATCCTTTTGTCTTTTCACCATCCCTCAATTGTTGATGTTAAGGAAGTAGTGGTTGGTAGTAGCCTAGATAGTATTTTTATGGTGATGGAGTACATGGAACATGATCTTAAAGGTGTCATGGAGGCAATGAAGCAGCCATATAGCCAAAGTGAGGTCAAATGCCTGATGCTCCAGCTGTTGGAGGGTGTGAAGTATCTTCATGATAATTGGGTACTTCATAGGTAACTGTTGATTTGACGCTCTATTTTTGTTTGCCAAGTATCCTCAAACCTATCCTGATGCCTGTATACTGATATGCATTTTCCATATACCAGGGATCTGAAGACCTCAAATCTTTTGCTGAATAACCGTGGTGAGTTGAAAATATGTGATTTTGGACTATCTCGTCAATATGGAAGCCCGCTAAAACCTTACACTCAATTGGTTGTGACTTTGTGGTACAGGTAGGTCTTTGGTCAACATCAGATTCATCCCCAGTGTTTTGGCTTGCCATTAATTTTTCCATTGTGAGCTCTGTTTATCAATCTGACCTGCCTTTTTGCTCCTTCTCAGGGCGCCAGAACTATTATTAGGAACGAAGGAATATTCTACCGCCATTGATATGTGGTCTGTGGGCTGCATAATGGCAGAGCTTTTGGCCAAAGAACCATTATTTAATGGGAAAACTGAGTTTGAACAGCTAGATAAGGTATTTCGTTTGACTTGTGATTTTGCATCCTTGCAATTACTATATTTTTTTCAGAGGTCTCATGTTGGATTTCCTTTCCTGTTGCAGATACCTATAAACCTTGATATATATTATATTTGATCATATCTCATGGTGAAGCTACTTTTATTGCAGATATTTAGAACACTTGGCACACCTAACGAGAAGATATGGCCTGGCTATGCCAAATTGCCGGGTGTAAAAGTCAATTTTGTCAAACAACCGTAAGTGTCTCCTGGATAATGCATACCTAATCGTGTTGGTCTGATGAGTGTCTATATGCCATTGTGATGAAATTTCTGTTCTTTTATCTTGTCAGGTACAACCGATTAAGAGATAAGTTCCCAGCTGCATCTTTTTCTGGTCGTCCAATTCTGTCTGAAGCAGGTTTTGATCTGTTAAATAATCTTCTAACATACGATCCTGAGAAGGTAATGTGCTACTGCTATTTTTTTTTTCATGATTTATATCATGCATTCATATTTAAATACTTCAATCTGAGCACACCTGTTTTGGCTTTACAGCGGTTATCAGCAGATGCTGCTTTGCAGCATGAGTGGTTCCGTGAAGTTCCTCTACCTAAATCAAAGGATTTCATGCCAACATTCCCTGCTCTAAATGAATTAGACAGGTACTTCTTCGCAACCATTTAATCTACTTGTAGTGTTGCTTAAATATCTTTGTTTCATGTAGTGAAATTTATTTTCCTAAAATTCCACAGGCGTACCAAACGGTATTTGAAGAGTCCTGATCCTCTAGAAGAGCAACGATTGAAAGAACTACAAGGGAACATTGGCAACCGTGGTCTTTTTGGCTGAGCTATTAGCAACTTGTTTGGGCTCTATTGATCCTGACTGTCATGCATCATTCTGAATCTATGAGGTCAGATACACTCTGAGGTGAGATGTGCCATGGACATGAAGTATCACGCATCTTGGTGTCTACCAGCAACTGATAGTGTTCTTTAGCAGGCATGGTGCTGGTTTAAGTTGATAGGTACCTGGCCCATCATAGAAATTTTGTTGCAGGATTAACTCCAACCAGATTGATCATAAAAGCAGTCTAATCTGCCTGCATCGTAAGGTGTGGCATGTTGGCTTTTATTGGTTAACAGCAGTTTCACCTTTGGAACTTCTGTATGTAAAATATTCCAGATTGGTACGTTGTAAACAATGTTCAGTGCGTTGGATTTAAAATAAGAATATTCCATCATTTTTTTTCTATATTCTCCTAGTGCCTTTTCTTTTGATCTTTCCATTTTGTTTGCAAGAGACAAGAGAAGCGAAGGGGAAGGATGCCTTTTGCTTTTCACCAGGAAATCAATGGACAGTAATACAACTTGAAAGGTAAATATATTCAAAAACCATTTACCTCAAGTGATGTATTGCTGACTAAAACTGATGAGTGCACGTGCAAAAGATCATTTGTGATGAAAGGTCGTGGTTGAAGGTTATCTGTGTTTTCATAGGTCTTTTTAAATGTTGTCTGGAATCTGGACAGACACATGTTCCCATATATCTAAAAAAGAAATGAAAAAAAGGGGTTACTGATTAAAGGAAAATGGAACAGAAAAATGAAAAACGGAGGATACTGTTCTGTAGGTATTCTCCTTGGCATCTTAACAATTTGTGCAAAACAATGCTTGTAAGTAACAGTAACTGATGTTTCTGTATCCACCACTCAACAGTGCTGTTCAGCACTATATTTTCACTCCCATCCCATCTGGCTATGCACCAATCAACTGTAGGATGCAATGAGGGAAGAATGAAATGTTTCTTTGTAGTTACTGTTCATAAGCTATCTAATTGTGAATTTGGAAGTGAATGTTTGGTCTTTTTTTTTTCTTTCCTGTTCGGCAGCCAACTTTCATTTTCACTTATATAAATAAATCTTTAAAAGAGAGAAACTTCAGTATCTTGTTACTCATTATACGTGGTGGACTCTTCCATGTATTTGATCGCTTGCTCCCTTGATGTTCTATTTCATGGACTATTTATCTATTCAGGGATAATGTTCACCAACCGTTTACAAATAATATTTGGTTCTTCTGTTGTATCCTTCTAATCTGAATGGTTTTCAACTCACTGGGAAACAAGTTTGTCTTGCATCGATTGATGCTTTCGTTCTCTGTATACCACATTTTTAGGATATTATTAGTAACTGTCTAATGTATTGTGACTCTTGCAACCTGGAAAAAGGTCTTTTTCCTTTATCTAAATGATAATGAGGTTGAATTAATCAGCTAAGCATATCTGTAAATATTAACCATTAGCTAAGTTATAGTCATGCGAGGTAGAAGTGGTGAGATCAAAAGTCAAGATGTCTTTATTTTTATGCAACATGTTGACTACTTCGAAGATATGCTAGTTAACTCCTTTTATGCGACAAGTGTTTTGCGTAAACTGCCTTTATGCTTTGTGAACTGGTGGAAGACCATATGCTCAGTCATTTTGTGCTTTGCATTTTGGTGGTAACTTAAATGCTGCTTAAGTGCTTGGAGAGTTATTTGAACTCACTACAGCTGTTGTCTGTGACACGTCTGCAGCTTAAGCTGTGGCTGCTTCAAGATAGGAAGCTTGATGGCCCTCAGCTTGTTGTACCTAAGTGACTAAATTTTGTGGAAGGTCTTCAAGAGAGTTCACCTGTTACTTTAGTGAACCATAGTGGTCACTGGTCAGTCTACTTATCCTATCCTGTCTATTAATATACATCATACTTCTGACTGATTGTGGGGACCGCTCGTCCATTTCTTTGGGATGGTTGAGGTGTAACGCCTTCTCTTAAATGACATTATCTTCATGAACAACATTTTAGTTTTCTCCCTACAACTTTTTCCCTCTTGACATTACCTGTAAACTTTGAAAACTAGTACATGGACACCTGAAATGGTACTGCGAACTTTAAACTACTAGTGGAGCGGGTTACTCACAAAACTACTTTAATCTGATTAGTTTTAGATGGGATCACACAACTTGAAAGGCAAGACTTCTACTGTTTTAGCTTGCTCTGCATAGTTTTAGCAGCTTGTGCTGCAATAGGGTGAGGGTTGCTCAACTGCGCAAATCCTCCCCTGATGCAAGACCACATTAACTTGGACAAGAATATGCTTTAAAATTTTAATCATATATGATGCTTGCATGACCCGCTTGAGTGATATTTGGGTCTCTTTTTGTAATCGTGCTTCTCTCTAACTTGTCTTCCCATGCCTTGCCGATATGAGTTTTGGGATATATCGATATCTGTTCATTGGTTTGATTATTCGTTGTCGTTATTTTGTTCTAACGTGGCCTCGAAGAGCCTCTATAATTCAGCCGGCATTGCCTGTTCGAATGGCCATCCGAGGCCTGTCTGCATTGCTATGGGGGTGGCAGCTGATTCTATGTACGAAAGAGGAAGCACACGCATGTATCATTTTGTCAAGTACTGTTGTGTAGTGCATTGTTCGCTATGTGTACTTTGTGTTTTTCTCTCCCCCTTTTGTACTTTCCTATATCAATGCTTGTAAACATGGAGGACTATTGCTTTACAGTAGTAGGTACTGAGCTAGTATTACATGTAAGTCTGTCTCATTTACAAG
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| CDS seq | ATGGCCGCTGGGCGCCACGGAGGATACAGGGACTACGAGGCAAGGGAGCGGGAGCTCGACGCGGAGGCTTCCAGGAGGAGCAAGGAGCAGCAGCACCACCACCACCCGAGCGGCCGACACCAACGCGGCGACTCCGACCCCCGCTGCGAAGCTGACCGGCGCCGTGACGGCGGTCGCAGCAGGGGCGGCAGGGAGTTGTCGAACGGGTACGGCCACCGCCGCTCTCCGCCTCCCAGGAGTCGCCTCTCAGCGAGGCTCGGGGATCGCGAGCCTGGCGAAGTTCTGAGCGGTAGTGCGTCAGATGACTCTGGTGGGAGGCCGCATAGAGCGAGGGAGAATGGTGTATCAAGTTCTAGTAGGGATGGTGAATCGGTGGTGGCTGCATCGGCCTCATCACCTAGCAAGAAAAGGAAATTCTCACCGATAATATGGGATAGGGATAGCCCAAAGCCAATGCATTCTGATGTGGCGAAGGGCAAGAAGGCGGTGGACTCTGTGCCTACCGAGCTTCCTCTCCCTCCCCCTCCCCCTCTGCCTCCGCAGGATCACATCCCTGAGAGGTTGGCTGTGGAGAAGTCGCCGATGGATGTGGAGCCTGCTGTTGCTTCCGAGAGTCCTGAGCAGTTACAGGAGCATGCGGAGAGTAGAGTGATGGAGGAGGAAGAAGAGTACTCAACAATGAGGAACATATCAACTTCAAGGTGGGCTGGTGCTAATGATGACGAGGAAGAGGGGGCACCACACAGGAAGAAGAAAAGTGCATCGCCTGCAGACTCTGCTGAGTTGGGGCAGAGGAAGAAGGCTCTTAGCCCAGAACTTGGTGAGGTTGTGGCCAGTGATATCTCTGGAGGGAGGACCATGTCAAGGTCGTCTGATTCAGGGAGGTTGGGTGCTGATGAGAATGAGGATTTGGAAGTTGATAAAGATGATTATATGGACGTTGACAGAGATGATGATGGTAACAGTGATATTGCAAATCATCAGTCAGGTATGGACTCAGAGTATGAAGTGCGCCGGTCTGAAACACCAGAACCAGTGAAGCCACCGCACAGATGTATAAATATGCTTCAAGGTTGCAGAAGTGTTGATGAATTTGAGAGGCTCAACAAGATTAATGAAGGCACCTATGGTGTTGTATACAGGGCAAGGGATAAGAAGACTGGTGAGATTGTTGCGTTGAAGAAGGTCAAGATGGAGAAGGAGAGAGAAGGTTTCCCATTAACATCTCTTAGGGAGATAAACATCCTTTTGTCTTTTCACCATCCCTCAATTGTTGATGTTAAGGAAGTAGTGGTTGGTAGTAGCCTAGATAGTATTTTTATGGTGATGGAGTACATGGAACATGATCTTAAAGGTGTCATGGAGGCAATGAAGCAGCCATATAGCCAAAGTGAGGTCAAATGCCTGATGCTCCAGCTGTTGGAGGGTGTGAAGTATCTTCATGATAATTGGGTACTTCATAGGGATCTGAAGACCTCAAATCTTTTGCTGAATAACCGTGGTGAGTTGAAAATATGTGATTTTGGACTATCTCGTCAATATGGAAGCCCGCTAAAACCTTACACTCAATTGGTTGTGACTTTGTGGTACAGGGCGCCAGAACTATTATTAGGAACGAAGGAATATTCTACCGCCATTGATATGTGGTCTGTGGGCTGCATAATGGCAGAGCTTTTGGCCAAAGAACCATTATTTAATGGGAAAACTGAGTTTGAACAGCTAGATAAGATATTTAGAACACTTGGCACACCTAACGAGAAGATATGGCCTGGCTATGCCAAATTGCCGGGTGTAAAAGTCAATTTTGTCAAACAACCGTACAACCGATTAAGAGATAAGTTCCCAGCTGCATCTTTTTCTGGTCGTCCAATTCTGTCTGAAGCAGGTTTTGATCTGTTAAATAATCTTCTAACATACGATCCTGAGAAGCGGTTATCAGCAGATGCTGCTTTGCAGCATGAGTGGTTCCGTGAAGTTCCTCTACCTAAATCAAAGGATTTCATGCCAACATTCCCTGCTCTAAATGAATTAGACAGGCGTACCAAACGGTATTTGAAGAGTCCTGATCCTCTAGAAGAGCAACGATTGAAAGAACTACAAGGGAACATTGGCAACCGTGGTCTTTTTGGCTGA
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| Protein seq | MAAGRHGGYRDYEARERELDAEASRRSKEQQHHHHPSGRHQRGDSDPRCEADRRRDGGRSRGGRELSNGYGHRRSPPPRSRLSARLGDREPGEVLSGSASDDSGGRPHRARENGVSSSSRDGESVVAASASSPSKKRKFSPIIWDRDSPKPMHSDVAKGKKAVDSVPTELPLPPPPPLPPQDHIPERLAVEKSPMDVEPAVASESPEQLQEHAESRVMEEEEEYSTMRNISTSRWAGANDDEEEGAPHRKKKSASPADSAELGQRKKALSPELGEVVASDISGGRTMSRSSDSGRLGADENEDLEVDKDDYMDVDRDDDGNSDIANHQSGMDSEYEVRRSETPEPVKPPHRCINMLQGCRSVDEFERLNKINEGTYGVVYRARDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGVMEAMKQPYSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGTKEYSTAIDMWSVGCIMAELLAKEPLFNGKTEFEQLDKIFRTLGTPNEKIWPGYAKLPGVKVNFVKQPYNRLRDKFPAASFSGRPILSEAGFDLLNNLLTYDPEKRLSADAALQHEWFREVPLPKSKDFMPTFPALNELDRRTKRYLKSPDPLEEQRLKELQGNIGNRGLFG |
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| Function | Cyclin-dependent kinase G-2 [UniProtKB/Swiss-Prot:Q7XUF4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_04g0488000 | OsNip_04t0488000-01 | Chr04 | 24371795 | 24376970 | + | RAP2018-11-26 | ||
| CDS seq | ATGGCCGCTGGGCGCCACGGAGGATACAGGGACTACGAGGCAAGGGAGCGGGAGCTCGACGCGGAGGCTTCCAGGAGGAGCAAGGAGCAGCAGCACCACCACCACCCGAGCGGCCGACACCAACGCGGCGACTCCGACCCCCGCTGCGAAGCTGACCGGCGCCGTGACGGCGGTCGCAGCAGGGGCGGCAGGGAGTTGTCGAACGGGTACGGCCACCGCCGCTCTCCGCCTCCCAGGAGTCGCCTCTCAGCGAGGCTCGGGGATCGCGAGCCTGGCGAAGTTCTGAGCGGTAGTGCGTCAGATGACTCTGGTGGGAGGCCGCATAGAGCGAGGGAGAATGGTGTATCAAGTTCTAGTAGGGATGGTGAATCGGTGGTGGCTGCATCGGCCTCATCACCTAGCAAGAAAAGGAAATTCTCACCGATAATATGGGATAGGGATAGCCCAAAGCCAATGCATTCTGATGTGGCGAAGGGCAAGAAGGCGGTGGACTCTGTGCCTACCGAGCTTCCTCTCCCTCCCCCTCCCCCTCTGCCTCCGCAGGATCACATCCCTGAGAGGTTGGCTGTGGAGAAGTCGCCGATGGATGTGGAGCCTGCTGTTGCTTCCGAGAGTCCTGAGCAGTTACAGGAGCATGCGGAGAGTAGAGTGATGGAGGAGGAAGAAGAGTACTCAACAATGAGGAACATATCAACTTCAAGGTGGGCTGGTGCTAATGATGACGAGGAAGAGGGGGCACCACACAGGAAGAAGAAAAGTGCATCGCCTGCAGACTCTGCTGAGTTGGGGCAGAGGAAGAAGGCTCTTAGCCCAGAACTTGGTGAGGTTGTGGCCAGTGATATCTCTGGAGGGAGGACCATGTCAAGGTCGTCTGATTCAGGGAGGTTGGGTGCTGATGAGAATGAGGATTTGGAAGTTGATAAAGATGATTATATGGACGTTGACAGAGATGATGATGGTAACAGTGATATTGCAAATCATCAGTCAGGTATGGACTCAGAGTATGAAGTGCGCCGGTCTGAAACACCAGAACCAGTGAAGCCACCGCACAGATGTATAAATATGCTTCAAGGTTGCAGAAGTGTTGATGAATTTGAGAGGCTCAACAAGATTAATGAAGGCACCTATGGTGTTGTATACAGGGCAAGGGATAAGAAGACTGGTGAGATTGTTGCGTTGAAGAAGGTCAAGATGGAGAAGGAGAGAGAAGGTTTCCCATTAACATCTCTTAGGGAGATAAACATCCTTTTGTCTTTTCACCATCCCTCAATTGTTGATGTTAAGGAAGTAGTGGTTGGTAGTAGCCTAGATAGTATTTTTATGGTGATGGAGTACATGGAACATGATCTTAAAGGTGTCATGGAGGCAATGAAGCAGCCATATAGCCAAAGTGAGGTCAAATGCCTGATGCTCCAGCTGTTGGAGGGTGTGAAGTATCTTCATGATAATTGGGTACTTCATAGGGATCTGAAGACCTCAAATCTTTTGCTGAATAACCGTGGTGAGTTGAAAATATGTGATTTTGGACTATCTCGTCAATATGGAAGCCCGCTAAAACCTTACACTCAATTGGTTGTGACTTTGTGGTACAGGGCGCCAGAACTATTATTAGGAACGAAGGAATATTCTACCGCCATTGATATGTGGTCTGTGGGCTGCATAATGGCAGAGCTTTTGGCCAAAGAACCATTATTTAATGGGAAAACTGAGTTTGAACAGCTAGATAAGATATTTAGAACACTTGGCACACCTAACGAGAAGATATGGCCTGGCTATGCCAAATTGCCGGGTGTAAAAGTCAATTTTGTCAAACAACCGTACAACCGATTAAGAGATAAGTTCCCAGCTGCATCTTTTTCTGGTCGTCCAATTCTGTCTGAAGCAGGTTTTGATCTGTTAAATAATCTTCTAACATACGATCCTGAGAAGCGGTTATCAGCAGATGCTGCTTTGCAGCATGAGTGGTTCCGTGAAGTTCCTCTACCTAAATCAAAGGATTTCATGCCAACATTCCCTGCTCTAAATGAATTAGACAGGCGTACCAAACGGTATTTGAAGAGTCCTGATCCTCTAGAAGAGCAACGATTGAAAGAACTACAAGGGAACATTGGCAACCGTGGTCTTTTTGGCTGA
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| Protein seq | MAAGRHGGYRDYEARERELDAEASRRSKEQQHHHHPSGRHQRGDSDPRCEADRRRDGGRSRGGRELSNGYGHRRSPPPRSRLSARLGDREPGEVLSGSASDDSGGRPHRARENGVSSSSRDGESVVAASASSPSKKRKFSPIIWDRDSPKPMHSDVAKGKKAVDSVPTELPLPPPPPLPPQDHIPERLAVEKSPMDVEPAVASESPEQLQEHAESRVMEEEEEYSTMRNISTSRWAGANDDEEEGAPHRKKKSASPADSAELGQRKKALSPELGEVVASDISGGRTMSRSSDSGRLGADENEDLEVDKDDYMDVDRDDDGNSDIANHQSGMDSEYEVRRSETPEPVKPPHRCINMLQGCRSVDEFERLNKINEGTYGVVYRARDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGVMEAMKQPYSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGTKEYSTAIDMWSVGCIMAELLAKEPLFNGKTEFEQLDKIFRTLGTPNEKIWPGYAKLPGVKVNFVKQPYNRLRDKFPAASFSGRPILSEAGFDLLNNLLTYDPEKRLSADAALQHEWFREVPLPKSKDFMPTFPALNELDRRTKRYLKSPDPLEEQRLKELQGNIGNRGLFG
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_04g0488000 | OsNip_04t0488000-02 | Chr04 | 24371839 | 24376875 | + | RAP2018-11-26 | ||
| CDS seq | ATGGCCGCTGGGCGCCACGGAGGATACAGGGACTACGAGGCAAGGGAGCGGGAGCTCGACGCGGAGGCTTCCAGGAGGAGCAAGGAGCAGCAGCACCACCACCACCCGAGCGGCCGACACCAACGCGGCGACTCCGACCCCCGCTGCGAAGCTGACCGGCGCCGTGACGGCGGTCGCAGCAGGGGCGGCAGGGAGTTGTCGAACGGGTACGGCCACCGCCGCTCTCCGCCTCCCAGGAGTCGCCTCTCAGCGAGGCTCGGGGATCGCGAGCCTGGCGAAGTTCTGAGCGGTAGTGCGTCAGATGACTCTGGTGGGAGGCCGCATAGAGCGAGGGAGAATGGTGTATCAAGTTCTAGTAGGGATGGTGAATCGGTGGTGGCTGCATCGGCCTCATCACCTAGCAAGAAAAGGAAATTCTCACCGATAATATGGGATAGGGATAGCCCAAAGCCAATGCATTCTGATGTGGCGAAGGGCAAGAAGGCGGTGGACTCTGTGCCTACCGAGCTTCCTCTCCCTCCCCCTCCCCCTCTGCCTCCGCAGGATCACATCCCTGAGAGGTTGGCTGTGGAGAAGTCGCCGATGGATGTGGAGCCTGCTGTTGCTTCCGAGAGTCCTGAGCAGTTACAGGAGCATGCGGAGAGTAGAGTGATGGAGGAGGAAGAAGAGTACTCAACAATGAGGAACATATCAACTTCAAGGTGGGCTGGTGCTAATGATGACGAGGAAGAGGGGGCACCACACAGGAAGAAGAAAAGTGCATCGCCTGCAGACTCTGCTGAGTTGGGGCAGAGGAAGAAGGCTCTTAGCCCAGAACTTGGTGAGGTTGTGGCCAGTGATATCTCTGGAGGGAGGACCATGTCAAGGTCGTCTGATTCAGGGAGGTTGGGTGCTGATGAGAATGAGGATTTGGAAGTTGATAAAGATGATTATATGGACGTTGACAGAGATGATGATGGTAACAGTGATATTGCAAATCATCAGTCAGGTATGGACTCAGAGTATGAAGTGCGCCGGTCTGAAACACCAGAACCAGTGAAGCCACCGCACAGATGTATAAATATGCTTCAAGGTTGCAGAAGTGTTGATGAATTTGAGAGGCTCAACAAGATTAATGAAGGCACCTATGGTGTTGTATACAGGGCAAGGGATAAGAAGACTGGTGAGATTGTTGCGTTGAAGAAGGTCAAGATGGAGAAGGAGAGAGAAGGTTTCCCATTAACATCTCTTAGGGAGATAAACATCCTTTTGTCTTTTCACCATCCCTCAATTGTTGATGTTAAGGAAGTAGTGGTTGGTAGTAGCCTAGATAGTATTTTTATGGTGATGGAGTACATGGAACATGATCTTAAAGGTGTCATGGAGGCAATGAAGCAGCCATATAGCCAAAGTGAGGTCAAATGCCTGATGCTCCAGCTGTTGGAGGGTGTGAAGTATCTTCATGATAATTGGGTACTTCATAGGGATCTGAAGACCTCAAATCTTTTGCTGAATAACCGTGGTGAGTTGAAAATATGTGATTTTGGACTATCTCGTCAATATGGAAGCCCGCTAAAACCTTACACTCAATTGGTTGTGACTTTGTGGTACAGGGCGCCAGAACTATTATTAGGAACGAAGGAATATTCTACCGCCATTGATATGTGGTCTGTGGGCTGCATAATGGCAGAGCTTTTGGCCAAAGAACCATTATTTAATGGGAAAACTGAGTTTGAACAGCTAGATAAGATATTTAGAACACTTGGCACACCTAACGAGAAGATATGGCCTGGCTATGCCAAATTGCCGGGTGTAAAAGTCAATTTTGTCAAACAACCGTACAACCGATTAAGAGATAAGTTCCCAGCTGCATCTTTTTCTGGTCGTCCAATTCTGTCTGAAGCAGGTTTTGATCTGTTAAATAATCTTCTAACATACGATCCTGAGAAGCGGTTATCAGCAGATGCTGCTTTGCAGCATGAGTGGTTCCGTGAAGTTCCTCTACCTAAATCAAAGGATTTCATGCCAACATTCCCTGCTCTAAATGAATTAGACAGGCGTACCAAACGGTATTTGAAGAGTCCTGATCCTCTAGAAGAGCAACGATTGAAAGAACTACAAGGGAACATTGGCAACCGTGGTCTTTTTGGCTGA
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| Protein seq | MAAGRHGGYRDYEARERELDAEASRRSKEQQHHHHPSGRHQRGDSDPRCEADRRRDGGRSRGGRELSNGYGHRRSPPPRSRLSARLGDREPGEVLSGSASDDSGGRPHRARENGVSSSSRDGESVVAASASSPSKKRKFSPIIWDRDSPKPMHSDVAKGKKAVDSVPTELPLPPPPPLPPQDHIPERLAVEKSPMDVEPAVASESPEQLQEHAESRVMEEEEEYSTMRNISTSRWAGANDDEEEGAPHRKKKSASPADSAELGQRKKALSPELGEVVASDISGGRTMSRSSDSGRLGADENEDLEVDKDDYMDVDRDDDGNSDIANHQSGMDSEYEVRRSETPEPVKPPHRCINMLQGCRSVDEFERLNKINEGTYGVVYRARDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGVMEAMKQPYSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGTKEYSTAIDMWSVGCIMAELLAKEPLFNGKTEFEQLDKIFRTLGTPNEKIWPGYAKLPGVKVNFVKQPYNRLRDKFPAASFSGRPILSEAGFDLLNNLLTYDPEKRLSADAALQHEWFREVPLPKSKDFMPTFPALNELDRRTKRYLKSPDPLEEQRLKELQGNIGNRGLFG
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_04g0488000 | OsNip_04t0488000-03 | Chr04 | 24375320 | 24377651 | + | RAP2018-11-26 | ||
| CDS seq | ATGCCTTGCCGATATGAGTTTTGGGATATATCGATATCTGTTCATTGGTTTGATTATTCGTTGTCGTTATTTTGTTCTAACGTGGCCTCGAAGAGCCTCTATAATTCAGCCGGCATTGCCTGTTCGAATGGCCATCCGAGGCCTGTCTGCATTGCTATGGGGGTGGCAGCTGATTCTATGTACGAAAGAGGAAGCACACGCATGTATCATTTTGTCAAGTACTGTTGTGTAGTGCATTGTTCGCTATGTGTACTTTGTGTTTTTCTCTCCCCCTTTTGTACTTTCCTATATCAATGCTTGTAA
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| Protein seq | MPCRYEFWDISISVHWFDYSLSLFCSNVASKSLYNSAGIACSNGHPRPVCIAMGVAADSMYERGSTRMYHFVKYCCVVHCSLCVLCVFLSPFCTFLYQCL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 6.970609 | 5.569093 | 9.994957 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0602100 | RBH | 6.636338 | 6.740887 | 9.024370 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g41100 | RBH | 3.135195 | 2.264337 | 2.069277 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0488000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0017900 | RBH | 1.799240 | 22.446823 | 15.037637 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0018700 | RBH | 0.859100 | 6.009138 | 5.886415 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0018390 | RBH | 4.283531 | 11.569304 | 20.193214 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0018120 | RBH | 0.889525 | 0.518265 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0018320 | RBH | 14.675406 | 19.166227 | 30.768156 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0381300 | RBH | 17.5931265 | 47.031034 | 101.6383895 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0017110 | RBH | 1.086522 | 1.207851 | 2.361083 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0380800 | RBH | 12.039593 | 26.526148 | 25.1738545 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0017610 | RBH | 1.025480 | 1.213548 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0017450 | RBH | 1.602906 | 26.592688 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0017500 | RBH | 13.111967 | 43.083401 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0017960 | RBH | 2.377299 | 1.556978 | 2.040783 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0018110 | RBH | 0.940894 | 10.250463 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G017400 | RBH | 1.944899 | 3.767071 | 5.465116 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0017340 | RBH | 4.605435 | 46.065529 | 19.110092 |
