Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_04g0456900 | OGI:04069630 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr04:22834019-22835912 | ||||||||
| Gene Symbol | EIL6, OsEIL6 | ||||||||||
| DNA seq | ATGGACGACAAAGGCAAAGCCAAGGCTGCTGACGCCGCTGCTGCTGCCGAGGCGGCGCCGGAGCAGGAGGAGTTCTTTAGTGACTCCGAGTCCGGGTCCGAGTCCATCGAGATCGCCGACCTGAAGAAGCGGATGTGGAAGGACCAGATGCTGCTCATGAAGCTCGAGGGCCGGTCGGGCCACGAAGGCGCCCTGGCGGCGCAGGACCACCGGGTCGTCAGGCGGGAGGAGGAGGCGGCGGAGGAGGAGCCGCCCGAGGCGCGGTACCGGCGGAAGGCGATGCTCCGGGCGCAGGACGGCGTGCTCCGCCACATGCTCAAGATGATGGAGGCCTGCAACGCGCGCGGGTTCGTGTACGGCATCGTGGACGAGTCCGGCGTGCCGGTGTCCGGCTCCTCCGACAGCCTCCGCGGGTGGTGGAAGGACGACGTCGCATTCGACCGGGCGGGGCCGACGGCGCTGTCGGGCCGAGGCGGCCGGGGGAGCCCGCGGAGCCCCGCGGCGGCGGCGTCGTTCCTGCACGGGCTCCTCGACATCCAGGACAGCACGCTGGGGTCGCTGCTGTCGGCGCTGATCCAGCACTGCGAGCCACCGCAGCGGAGCTTCCCGCTCGACCGCGGCCTGCCGCCGCCGTGGTGGCCGACCGGCGGCGAGGCGTGGTGGGGCCTGCAGGGCGAGGCGCAGGCCAGCCAGGGCCCGCCGCCGTACCGGAAGCCGCACGACCTCAAGAAGGCGTGGAAGATCTCCCTGCTCAGAGCTAGCGCCGTCATCAAGCACCTGAGCCCGCGGTTCGACCAGATTCGCAAGCTCGTGTGGCAGTCCAAGCGGCTTCAGCACAAGATGAGCGCCAGGGACGCCGATACCTGGTCCCGCGTCATCACCCAGGAGGAGGCGCTCAGCCGCCACGCGCTGCGCTCCCTCCACATCACGCCGCTCGACGACGACGACGACGAACCCAACGAGGGGCCGACGCCGCGCGAGTCGCACGCCGACAAGCGCAAGCGCGAGGTCGGCGGCGGCGGCGGCGGCGGCGGCGAGGAGATGCAGCTCTCTCTGCCGGCGGACATCGACGTCGTCCCGGAGGCGGACCGCAGCTCCATCGACGAGCTGATGAAGCTCTACTACAGCTGCCTGCAGGGGACCGACACCGACGGCGGCGGCGGCGAGCAGGGGAAGGACGTGGCGGCCGGAGCCGGCGGGGATGGGAGCGTCGCTCCGGAGACCGTGCATGTCGACGACGACGACATGCTGGAGGGTCTCCTCGGTGTCGCGCAAGTGGTGGACATGAGCGACTTCCCGGACAGTCCCATCTGTCACTGGGGGTCGAGCTCGGATTAGTGCCGGATAATCTGATATAGATAGGCGTGGAGTTTTGTTAATTATTTATGCCTGTTTAATTAGTTAATTTCGTTCTCTTCCATTTTGGATTGAAAAAAATGACAGCTCCAAGCAGAGCAGAGGTATCTAGTTTGCACTAATTTGCAGAGTGGAGTTTGGTACCGGCAGGTATTGCAATGGTTGAGATTGGGAATGTGATCTGCTCCTGTACTTGAAATCAGCTCATGTTACGACCAAATGCAGTATCGATGTTGTATCTGCTTCAAGGCAAATGCAGCCATTGAAGAAAGAGTGGCAGGTACTCTGGAGTTCTTCAGTTTGCAGAGAGAGTATTCTTCAGTTCTTACCATATGCTCCTACTTATCTTTGCCAGAGCTACTATAGCACGTTTCTTCCTTCGGCGCAATGGAAGAAACAAAATACTATGGTCATTTCGAACCTCGAAGAGCGGATGAGATATTTCGTAGCAATGCGGCCTTTAGCTGATGCAATTTCGCCATGCAGGCAAGCGGCCAAACAGAGTGCACATGACAAAGGAATGGCACGAACACCATGA
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| CDS seq | ATGGACGACAAAGGCAAAGCCAAGGCTGCTGACGCCGCTGCTGCTGCCGAGGCGGCGCCGGAGCAGGAGGAGTTCTTTAGTGACTCCGAGTCCGGGTCCGAGTCCATCGAGATCGCCGACCTGAAGAAGCGGATGTGGAAGGACCAGATGCTGCTCATGAAGCTCGAGGGCCGGTCGGGCCACGAAGGCGCCCTGGCGGCGCAGGACCACCGGGTCGTCAGGCGGGAGGAGGAGGCGGCGGAGGAGGAGCCGCCCGAGGCGCGGTACCGGCGGAAGGCGATGCTCCGGGCGCAGGACGGCGTGCTCCGCCACATGCTCAAGATGATGGAGGCCTGCAACGCGCGCGGGTTCGTGTACGGCATCGTGGACGAGTCCGGCGTGCCGGTGTCCGGCTCCTCCGACAGCCTCCGCGGGTGGTGGAAGGACGACGTCGCATTCGACCGGGCGGGGCCGACGGCGCTGTCGGGCCGAGGCGGCCGGGGGAGCCCGCGGAGCCCCGCGGCGGCGGCGTCGTTCCTGCACGGGCTCCTCGACATCCAGGACAGCACGCTGGGGTCGCTGCTGTCGGCGCTGATCCAGCACTGCGAGCCACCGCAGCGGAGCTTCCCGCTCGACCGCGGCCTGCCGCCGCCGTGGTGGCCGACCGGCGGCGAGGCGTGGTGGGGCCTGCAGGGCGAGGCGCAGGCCAGCCAGGGCCCGCCGCCGTACCGGAAGCCGCACGACCTCAAGAAGGCGTGGAAGATCTCCCTGCTCAGAGCTAGCGCCGTCATCAAGCACCTGAGCCCGCGAGAGAGTATTCTTCAGTTCTTACCATATGCTCCTACTTATCTTTGCCAGAGCTACTATAGCACGTTTCTTCCTTCGGCGCAATGGAAGAAACAAAATACTATGGTCATTTCGAACCTCGAAGAGCGGATGAGATATTTCGTAGCAATGCGGCCTTTAGCTGATGCAATTTCGCCATGCAGGCAAGCGGCCAAACAGAGTGCACATGACAAAGGAATGGCACGAACACCATGA
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| Protein seq | MDDKGKAKAADAAAAAEAAPEQEEFFSDSESGSESIEIADLKKRMWKDQMLLMKLEGRSGHEGALAAQDHRVVRREEEAAEEEPPEARYRRKAMLRAQDGVLRHMLKMMEACNARGFVYGIVDESGVPVSGSSDSLRGWWKDDVAFDRAGPTALSGRGGRGSPRSPAAAASFLHGLLDIQDSTLGSLLSALIQHCEPPQRSFPLDRGLPPPWWPTGGEAWWGLQGEAQASQGPPPYRKPHDLKKAWKISLLRASAVIKHLSPRESILQFLPYAPTYLCQSYYSTFLPSAQWKKQNTMVISNLEERMRYFVAMRPLADAISPCRQAAKQSAHDKGMARTP |
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| Function | ETHYLENE INSENSITIVE 3-like 5 protein [UniProtKB/Swiss-Prot:Q9FJQ5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_04g0456900 | OsNip_04t0456900-00 | Chr04 | 22834019 | 22835912 | + | RAP2018-11-26 | ||
| CDS seq | ATGGACGACAAAGGCAAAGCCAAGGCTGCTGACGCCGCTGCTGCTGCCGAGGCGGCGCCGGAGCAGGAGGAGTTCTTTAGTGACTCCGAGTCCGGGTCCGAGTCCATCGAGATCGCCGACCTGAAGAAGCGGATGTGGAAGGACCAGATGCTGCTCATGAAGCTCGAGGGCCGGTCGGGCCACGAAGGCGCCCTGGCGGCGCAGGACCACCGGGTCGTCAGGCGGGAGGAGGAGGCGGCGGAGGAGGAGCCGCCCGAGGCGCGGTACCGGCGGAAGGCGATGCTCCGGGCGCAGGACGGCGTGCTCCGCCACATGCTCAAGATGATGGAGGCCTGCAACGCGCGCGGGTTCGTGTACGGCATCGTGGACGAGTCCGGCGTGCCGGTGTCCGGCTCCTCCGACAGCCTCCGCGGGTGGTGGAAGGACGACGTCGCATTCGACCGGGCGGGGCCGACGGCGCTGTCGGGCCGAGGCGGCCGGGGGAGCCCGCGGAGCCCCGCGGCGGCGGCGTCGTTCCTGCACGGGCTCCTCGACATCCAGGACAGCACGCTGGGGTCGCTGCTGTCGGCGCTGATCCAGCACTGCGAGCCACCGCAGCGGAGCTTCCCGCTCGACCGCGGCCTGCCGCCGCCGTGGTGGCCGACCGGCGGCGAGGCGTGGTGGGGCCTGCAGGGCGAGGCGCAGGCCAGCCAGGGCCCGCCGCCGTACCGGAAGCCGCACGACCTCAAGAAGGCGTGGAAGATCTCCCTGCTCAGAGCTAGCGCCGTCATCAAGCACCTGAGCCCGCGAGAGAGTATTCTTCAGTTCTTACCATATGCTCCTACTTATCTTTGCCAGAGCTACTATAGCACGTTTCTTCCTTCGGCGCAATGGAAGAAACAAAATACTATGGTCATTTCGAACCTCGAAGAGCGGATGAGATATTTCGTAGCAATGCGGCCTTTAGCTGATGCAATTTCGCCATGCAGGCAAGCGGCCAAACAGAGTGCACATGACAAAGGAATGGCACGAACACCATGA
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| Protein seq | MDDKGKAKAADAAAAAEAAPEQEEFFSDSESGSESIEIADLKKRMWKDQMLLMKLEGRSGHEGALAAQDHRVVRREEEAAEEEPPEARYRRKAMLRAQDGVLRHMLKMMEACNARGFVYGIVDESGVPVSGSSDSLRGWWKDDVAFDRAGPTALSGRGGRGSPRSPAAAASFLHGLLDIQDSTLGSLLSALIQHCEPPQRSFPLDRGLPPPWWPTGGEAWWGLQGEAQASQGPPPYRKPHDLKKAWKISLLRASAVIKHLSPRESILQFLPYAPTYLCQSYYSTFLPSAQWKKQNTMVISNLEERMRYFVAMRPLADAISPCRQAAKQSAHDKGMARTP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | 0.691103 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g38400 | RBH | 0.0 | 0.0 | 0.094862 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0456900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0015650 | RBH | 0.117973 | 0.000000 | 0.380558 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0016390 | RBH | 0.000000 | 0.000000 | 0.242877 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0016120 | RBH | 0.000000 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0015850 | RBH | 0.075535 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0016090 | RBH | 0.000000 | 0.000000 | 0.485934 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0355800 | RBH | 0.3888895 | 0.196289 | 1.921168 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0014890 | RBH | 0.000000 | 0.000000 | 0.050400 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0354500 | RBH | 1.315115 | 0.2536025 | 1.7100645 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0015410 | RBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0015320 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0015280 | RBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0015820 | RBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0015910 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G015130 | RBH | 0.000000 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0015190 | RBH | 0.229834 | 0.0 | 0.000000 |
