Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_03g0687700 | OGI:03077490 | 9/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr03:27444695-27445609 | ||||||||
| Gene Symbol | OsEnS-52 | ||||||||||
| DNA seq | GAAATTTAAGATCATCCCATTCAGAAAGGGAACAACGAACACAGACATCACGGTGACACACGAACTGACACTAGAGCATAGAGAGCAACGTTTTATTCAGAGAAACAGCACCCGTGCAAATGCAGAATATACTCCATATAAGTATCAGGCGCTGTGGCTGTGATCCTGCAGCAGCTGCACGAAGCTGCGGTTCGCGAGCAGCTTGGCAATGGCGAGCGCCTCGCCGGCGCTGCGGATGCCGGCGCGCCTCCTCAGCACCTCGGTGAAGGGCCCGTCCCACTCGCCGGTGCGCCTCCACCGGAGGACCTCGAACGACATGGTGTCCCAGTGCTCGATGTACGGCAGGTGCTCCGCCGCCACGCGCGCCTCGCCGCTCTCCCACCCGCTCGACACCGTCTCCCTGATCGGCTCCAGCCGCAGGGCCTGGGTGAACATCACCGACAGCGCCGCCACCGCCCGCTTCACCGCCGCCGTCCCCTCCTCGGCGTCGGGGTCGTAGGAGGCGAGCACCCCGGCGGCCCGCGCCGCGGCCGCTTTCCCGAGCGGCAGGCCGGGGACGTGGTGGAGGCCGCCGATGAGGTCGCGGTAGGTGTTGCGGAACGGGAGGCGCCTGGCGTTGGGGATGGCGTCCTCGTCGCCGCGGAAGACGTGCCAGTGGTGGCTCCCGTTGGTGAAGCCGGCGAAGGAGATGTCGTGGCGGTGCATGGCCAGGACGGTGCCGTCGCCGTCGCCGCTACGCAGTTTGAGAAAGACCAGGTCGTCGCCGGGTGGGTCTTGCTGCTGCGCCGCCGAGACCGAGAGAACCTCTCCGCGGTGGCCGGCGAGATTGAGGAGGAAGCGGAGGAGGAGGAGGAGCAGCGCGGCCTGGAAGTTCGCCATGGTGAGATCGAGCTAGCTAGCTCCCTAAGCTTTGAT
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| CDS seq | ATGGCGAACTTCCAGGCCGCGCTGCTCCTCCTCCTCCTCCGCTTCCTCCTCAATCTCGCCGGCCACCGCGGAGAGGTTCTCTCGGTCTCGGCGGCGCAGCAGCAAGACCCACCCGGCGACGACCTGGTCTTTCTCAAACTGCGTAGCGGCGACGGCGACGGCACCGTCCTGGCCATGCACCGCCACGACATCTCCTTCGCCGGCTTCACCAACGGGAGCCACCACTGGCACGTCTTCCGCGGCGACGAGGACGCCATCCCCAACGCCAGGCGCCTCCCGTTCCGCAACACCTACCGCGACCTCATCGGCGGCCTCCACCACGTCCCCGGCCTGCCGCTCGGGAAAGCGGCCGCGGCGCGGGCCGCCGGGGTGCTCGCCTCCTACGACCCCGACGCCGAGGAGGGGACGGCGGCGGTGAAGCGGGCGGTGGCGGCGCTGTCGGTGATGTTCACCCAGGCCCTGCGGCTGGAGCCGATCAGGGAGACGGTGTCGAGCGGGTGGGAGAGCGGCGAGGCGCGCGTGGCGGCGGAGCACCTGCCGTACATCGAGCACTGGGACACCATGTCGTTCGAGGTCCTCCGGTGGAGGCGCACCGGCGAGTGGGACGGGCCCTTCACCGAGGTGCTGAGGAGGCGCGCCGGCATCCGCAGCGCCGGCGAGGCGCTCGCCATTGCCAAGCTGCTCGCGAACCGCAGCTTCGTGCAGCTGCTGCAGGATCACAGCCACAGCGCCTGA
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| Protein seq | MANFQAALLLLLLRFLLNLAGHRGEVLSVSAAQQQDPPGDDLVFLKLRSGDGDGTVLAMHRHDISFAGFTNGSHHWHVFRGDEDAIPNARRLPFRNTYRDLIGGLHHVPGLPLGKAAAARAAGVLASYDPDAEEGTAAVKRAVAALSVMFTQALRLEPIRETVSSGWESGEARVAAEHLPYIEHWDTMSFEVLRWRRTGEWDGPFTEVLRRRAGIRSAGEALAIAKLLANRSFVQLLQDHSHSA |
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| Function | 60 kDa jasmonate-induced protein [UniProtKB/Swiss-Prot:Q00531] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_03g0687700 | OsNip_03t0687700-01 | Chr03 | 27444695 | 27445609 | - | RAP2018-11-26 | ||
| CDS seq | ATGGCGAACTTCCAGGCCGCGCTGCTCCTCCTCCTCCTCCGCTTCCTCCTCAATCTCGCCGGCCACCGCGGAGAGGTTCTCTCGGTCTCGGCGGCGCAGCAGCAAGACCCACCCGGCGACGACCTGGTCTTTCTCAAACTGCGTAGCGGCGACGGCGACGGCACCGTCCTGGCCATGCACCGCCACGACATCTCCTTCGCCGGCTTCACCAACGGGAGCCACCACTGGCACGTCTTCCGCGGCGACGAGGACGCCATCCCCAACGCCAGGCGCCTCCCGTTCCGCAACACCTACCGCGACCTCATCGGCGGCCTCCACCACGTCCCCGGCCTGCCGCTCGGGAAAGCGGCCGCGGCGCGGGCCGCCGGGGTGCTCGCCTCCTACGACCCCGACGCCGAGGAGGGGACGGCGGCGGTGAAGCGGGCGGTGGCGGCGCTGTCGGTGATGTTCACCCAGGCCCTGCGGCTGGAGCCGATCAGGGAGACGGTGTCGAGCGGGTGGGAGAGCGGCGAGGCGCGCGTGGCGGCGGAGCACCTGCCGTACATCGAGCACTGGGACACCATGTCGTTCGAGGTCCTCCGGTGGAGGCGCACCGGCGAGTGGGACGGGCCCTTCACCGAGGTGCTGAGGAGGCGCGCCGGCATCCGCAGCGCCGGCGAGGCGCTCGCCATTGCCAAGCTGCTCGCGAACCGCAGCTTCGTGCAGCTGCTGCAGGATCACAGCCACAGCGCCTGA
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| Protein seq | MANFQAALLLLLLRFLLNLAGHRGEVLSVSAAQQQDPPGDDLVFLKLRSGDGDGTVLAMHRHDISFAGFTNGSHHWHVFRGDEDAIPNARRLPFRNTYRDLIGGLHHVPGLPLGKAAAARAAGVLASYDPDAEEGTAAVKRAVAALSVMFTQALRLEPIRETVSSGWESGEARVAAEHLPYIEHWDTMSFEVLRWRRTGEWDGPFTEVLRRRAGIRSAGEALAIAKLLANRSFVQLLQDHSHSA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 8.877439 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0688600 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g48220 | RBH | 0.0 | 0.0 | 1.840035 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0687700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0030530 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0030260 | RBH | 0.0 | 0.0 | 1.045992 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0030320 | RBH | 0.223953 | 0.0 | 0.259558 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0030420 | SBH | 0.217059 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0030120 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0473100 | RBH | 0.0567485 | 0.047361 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0029820 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0473900 | RBH | 0.0878695 | 0.010234 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0030160 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0030230 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0030190 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0030000 | RBH | 0.646126 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0029960 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G029980 | RBH | 0.394831 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0029910 | RBH | 0.0 | 0.0 | 0.0 |
