Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_03g0329700 | OGI:03032330 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr03:12117813-12122998 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GCGTCTTCTTCCTCCTTTTTTTGACCCCTCGCGCGGTGGCTTCCGCGGACACCGCGCGCGCGAGCTCACCACGACACCACCCAGGCGGCCGGGCCAGGAGCTTGCATTGCTTTCAAGCCAAGTCGTCGTCGTCGTCTTTCTCTCTCACACACACACCACACTCTGTTCCACTGTGTGTATCTCTAACCTCCAAGCTTATCATGTCATGTTGGCTTCTTGAATGCACATCCCATCATGAGGCGCATCATGCTGATGCGGTTGTGGTGCTGGTAGTTGCCTTGCGCGTTCTTTGTCTCTGTCTCTCTCTCCCGAGCTATAGCTACAGCTATAGCCTTTTCCTGAGTGGCCGGGGCGACCTAAAACCGCACCTCTGGTAGCAGCAGCAGCTCGCACGCAGCTCATCGTGTCGTCTGCATGCATGGCGGCACCGGTGCCCGGAGGCTGTGCGAGGATGAGACGGGTGGTTCTCGGCGTCGTGCTGCTGCTCTCGGTGTGCGTCCGAGCAAGCCATGCCGTGACGGATAGCCAGGACAGTGAGTACCATATGACCCAACCATTTAATCAGCTAGTGTTAAGATCGTTTTGTTTTCTCAGTCTTGAACGATTGGATTTATTGATTTTGAGGAGGGAAAGAACAAATGTTCTGTATATTCTTCGATGATTGGAAGGGAACACCAGAGGCGTGTCTCCATGATTGTCCAATCTTGAAGGAGTGGGATAACCTTGTTTATGAAGCTCGTGCTGCTCTGTATTTATGATCTTATTGTGTGATATCTTGAAGAATGAAATGAACCGTGGATTTGGTTGTAGCATCTGTTCTCCGCGCGTTGATGGATCAGTGGCAGAACGCGCCGCCAACGTGGGGGCAGTCTGACGACCCATGCAGCGATTCGCCATGGGATGGAGTGGTATGCAGCAACAACAGAGTGATCTCCATGTAAGTGCTCTACTGCTCTGTTCTATAACTCTGCATGTTTCCAACTACAAGGTTTACGTTTACCCACTGCTACCCGACTGTTTCAGTAAAATTTCTACCATGGGCATCAAGGGAGTTCTAGCTGCTGACATAGGGCAACTGACCGAGCTTCAATCCCTGTATGTAGCAGCAGAGCACACTGTTCAAGATTGATCTTTTTTTCTGAAACCTCATGTTGTTCCGACCTGCAACGGTGAATCATGAGAGAACTGCATGTATGCAGGGACATGTCATTTAATAAGGATCTTGGCGGCGTGCTCACTCCAAACATCGGAAACTTGAAGCAGCTTACCACCTTGTAAGTTCTGAAAGTATTTCTCTTTCAGGTTTCTGCCATCTAAGAAGTTAGTATGCTCATGTGCTGCCTATTTTGTAGGATTCTGGCCGGTTGCAGTTTCCATGGCAACATCCCGGATGAGCTAGGGAGTCTGCCAAAATTGTCTTACATGTGAGAATTACTCACTGGTGAATTAGTAGACATACAATTGGGAGACTTCTGCAACTTAGTGTCTGGAGAAGAAGACTGACATAATCTGTCTTTCAGGGCATTGAACTCAAATCAGTTCTCTGGAAAAATACCAGCTTCTATGGGCAATCTTTCCAACCTCTATTGGTTCGACATCGCCGACAATCAATTGTCAGGTCCCTTACCAATCTCGACAAATGGTGGAATGGGTTTAGACAAGCTTTTCAAAACCAAACACTTGTAGGTCCTAAGAAGTTTGTTCATTCCTATTCCTCAAGAGGCCATACTAAATGAAATGTAGCACTGACCATATGTTTCTGGTTCTCTCTGCAGCCACTTCAACAAGAACCAATTGTCCGGTCCAATCCCAGATGCCCTCTTCAGTCCTGAGATGACACTGATCCATTTGTAAGTTCCTGACCTCCTGCTTCTTTGATTCAGTTGGCAATTCAGCTAAAAAGGTGAACTAACACGTTAGGAGTTTTGATGCAGGCTTTTTGATGGAAACAAATTCACTGGTAATATCCCAGACTCTCTTGGGCTTGTTACTACACTTGAAGTTGTGTAAGTGTCCATCCACAAACAAAAGCTTCACATGAAACTACGTAAACAGTTTTTGTTATGTCGGATTACATAAAACATTCATCTGCTCTGTTTGTTGTTTGAACAGCCGGCTTGATAGGAATTCGCTCTCAGGGCCAGTTCCAGAGAATCTGAATAACCTCACTAAAGTAAATGAGCTGTAAGTTGTTCAAGAATTGCATAGATACCATTGACAGTTCCAGTGCACCTGTATATGTGAGATGGAATATTCACACTAAACAAGCTATTGTCATATTTCAGCAATTTAGCCAACAACCAGCTTACCGGCCCATTGCCTGATCTATCTCAGATGACCCAACTCAATTATGTGTAAGATACTGGCACTCCTCCACAAAATTTCTTCTTCTAACTTAAACATACCATCAATCATGTTTGACTTGAAATCTCCTCCAATTTTACCACAGGGATCTGAGCAACAACACGTTCGACCCTTCTCCTAGCCCACAATGGTTTTGGAGGCTGCCACAGCTCTCAGCTCTGTAAGTGTTCTCCTTCTCCAGTGCCTCCAGCTTCAGAACATGCTCTCACATGTGGCATAACCAAAAAACCTGACCTGATCATCTCTGTGATGCTGTTCATCAAGGATCATACAATCCGGGAGGCTTTACGGCACGGTGCCGATGAGGCTGTTCAGCGGCCCACAGTTGCAGCAAGTGTAAGCTCACTGAACAAACCAGCCTCACTGTGCAGTAATCCGCCTGACAAAATGGCCTCAACAACTTGTGACGCTCACCATTCGCTGCAGGATCCTCGACGGCAACGCGTTCAACGGCACCCTCGACATGGGCAAGTACATCAGCAGCGAGCTGAGCATCGTCAGCCTCAAGGACAACCAGCTCTCCTCCGTCACGGTCACCGCCAGCTACAACGGCACCCTTTCGTGAGTCCATTGAACCAACCATCTCCGAATGATGCCGTGGCCTTCGCTGCTGCCTCTCCTTGCCTAACTCCCTGTACATCGATCAGGCTGGCCGGGAACCCGGTGTGCGACCGGCTGCCGAACACGCAGTACTGCAACGTGACGCAGCGCGCCGCGGCGGCGCCGTACTCGACGAGCCTTGTCAAGTGCTTCTCGGGGACGTGCAACGCGGTGGGGGAGAGCATGAGCCCGCAGAGCTGCGCGTGCGCGTACCCGTACCAGGGGGTGATGTACTTCAGGGCGCCGTTCTTCGGGGACGTGACCAACGGCACGGCGTTCCAGGAGCTGGAGAGCCGGCTGTGGACCAAGCTGGACCTCACCCCGGGCTCCGTCTTCCTCCAGGACCCCTTCTTCAACGCCGACGCCTACATGCAGGTCCAGGTCAAGCTTTTCCCCTCCGGCTCCGCCTACTTCAACCGCTCCGAGGTCATGCGCATCGGCTTCGACCTCAGCAACCAGACCTTCAAGCCGCCCAAGGAGTTTGGCCCTTACTACTTCATCGCCTCGCCCTACCCCTTCCCAGGTCAGTCCATGACTCCCATGGATCAATTTGATTCAGACATTGTTCAGCTCGTTACCATTCAAACTGACCTGTTGGTGTGCAGAGGAGCGGTCGTCGTCGAGGAGCAAGGGTGCCATCATCGGGATCGCGGCCGGATGCGGCGTGCTGGTGGTGGCGCTCGTGGGCGCGGCGGTGTACGCGCTCGTGCAGCGGCGGCGCGCGCAGAAGGCGAGGGAGGAGCTGGGCGGGCCGTTCGCGTCGTGGAAACGGAGCGAGGAGAGGGGCGGGGCGCCGCGGCTGAAGGGGGCGAGGTGGTTCTCGTACGAGGAGCTGAAGCGGAGCACCAACAACTTCGCGGAGGCGAACGAGCTCGGGTACGGAGGGTACGGCAAGGTGTACAGGGGGATGCTGCCGACGGGGACGTTCATCGCCATCAAGAGGGCGCAGCAGGGGTCGATGCAGGGCGGGCACGAGTTCAAGACGGAGATCGAGCTGCTCTCCCGCGTCCACCACAAGAACCTCGTCGGCCTCGTCGGATTCTGCTTCGAGCAGGGCGAGCAGATGCTCGTCTACGAGTTCATGTCCGCCGGCACCCTCCGCGACAGCCTCTCCGGTAAAACCACAAACCACATTTGTCCGTGCGTTCCTGACGCGCCGCGCGTTCTTGCACGGCACGCGCCCTGAACTTGTTGGATTTTTTTCTTTGCAGGGAAGAGCGGGCTGCACCTTGACTGGAAGAAGCGGCTGCGGGTAGCGCTCGGCGCGGCGCGTGGGCTGGCCTACCTCCACGAGCTCGCCGACCCGCCCATCATCCACAGGGACGTCAAGTCCAGCAACATCCTCATGGACGAGCACCTCACGGCCAAGGTCGCCGACTTCGGCCTCTCCAAGCTAGTGTCCGACACCGAGAGGGGCCACGTCAGCACCCAAGTCAAAGGAACACTGGTAAACGCGCGCACCACGCCGACCGATATGCTGCACCCTTCGCCGTCGGCTCGTCTGATTTGTTGTTCTCCTTCTTCCATACTTGCAGGGCTACCTGGATCCCGAGTACTACATGTCCCAGCAGCTGACCGAGAAGAGCGACGTGTACAGCTTCGGGGTGGTGATGCTCGAGCTGATCATCGCCAAGCAGCCGATCGAGAAAGGGAAGTACATCGTCCGGGAGGTGAAGCGGGCGTTCGACGCCGGCGACGCCGAGTTCTGCGGGATCAAGGACATGATAGACGCCAGGATCATGAACACCAACCACCTGGCCGCATTCAGCAAGTTCGTCCAGCTGGCGCTCCGGTGCGTCGAGGAGGTGGCCGGCGCGCGGCCGTCGATGAGCGACGTCGTCAAGGAGATCGAGATGATGCTGCAGAGCGAGGGGCTGAGCAGCGCCTCCACGTCGGCGTCGACGTCCGCGACGGAGTTCGACGTCACCAAGGGTGCCCCACGCCATCCTTACAACGATCCTCTCCCGAAGAAGGACAAGGACATGAGCACCGACTCGTTCGACTACAGCGGAGGGTATTCCTTCCAATCCAAGATCGAACCGAAGTAGAAGATAACCGGATTGGGATTCTGTTTTGGTCGATCTTTTTCTTCCTCTTCAGCAAGTGGATTATCGAATATGTAGAGATGCGAAGAAATTTTATGTTATGTGATTGGTACATTTACACTCTTTAAGAGTGATTTTGTATGGTGATTTTTCTAATATATTGTTAGAAGCACCACG
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| CDS seq | ATGGCGGCACCGGTGCCCGGAGGCTGTGCGAGGATGAGACGGGTGGTTCTCGGCGTCGTGCTGCTGCTCTCGGTGTGCGTCCGAGCAAGCCATGCCGTGACGGATAGCCAGGACACATCTGTTCTCCGCGCGTTGATGGATCAGTGGCAGAACGCGCCGCCAACGTGGGGGCAGTCTGACGACCCATGCAGCGATTCGCCATGGGATGGAGTGGTATGCAGCAACAACAGAGTGATCTCCATTAAAATTTCTACCATGGGCATCAAGGGAGTTCTAGCTGCTGACATAGGGCAACTGACCGAGCTTCAATCCCTGGACATGTCATTTAATAAGGATCTTGGCGGCGTGCTCACTCCAAACATCGGAAACTTGAAGCAGCTTACCACCTTGATTCTGGCCGGTTGCAGTTTCCATGGCAACATCCCGGATGAGCTAGGGAGTCTGCCAAAATTGTCTTACATGGCATTGAACTCAAATCAGTTCTCTGGAAAAATACCAGCTTCTATGGGCAATCTTTCCAACCTCTATTGGTTCGACATCGCCGACAATCAATTGTCAGGTCCCTTACCAATCTCGACAAATGGTGGAATGGGTTTAGACAAGCTTTTCAAAACCAAACACTTCCACTTCAACAAGAACCAATTGTCCGGTCCAATCCCAGATGCCCTCTTCAGTCCTGAGATGACACTGATCCATTTGCTTTTTGATGGAAACAAATTCACTGGTAATATCCCAGACTCTCTTGGGCTTGTTACTACACTTGAAGTTGTCCGGCTTGATAGGAATTCGCTCTCAGGGCCAGTTCCAGAGAATCTGAATAACCTCACTAAAGTAAATGAGCTCAATTTAGCCAACAACCAGCTTACCGGCCCATTGCCTGATCTATCTCAGATGACCCAACTCAATTATGTGGATCTGAGCAACAACACGTTCGACCCTTCTCCTAGCCCACAATGGTTTTGGAGGCTGCCACAGCTCTCAGCTCTGATCATACAATCCGGGAGGCTTTACGGCACGGTGCCGATGAGGCTGTTCAGCGGCCCACAGTTGCAGCAAGTGATCCTCGACGGCAACGCGTTCAACGGCACCCTCGACATGGGCAAGTACATCAGCAGCGAGCTGAGCATCGTCAGCCTCAAGGACAACCAGCTCTCCTCCGTCACGGTCACCGCCAGCTACAACGGCACCCTTTCGCTGGCCGGGAACCCGGTGTGCGACCGGCTGCCGAACACGCAGTACTGCAACGTGACGCAGCGCGCCGCGGCGGCGCCGTACTCGACGAGCCTTGTCAAGTGCTTCTCGGGGACGTGCAACGCGGTGGGGGAGAGCATGAGCCCGCAGAGCTGCGCGTGCGCGTACCCGTACCAGGGGGTGATGTACTTCAGGGCGCCGTTCTTCGGGGACGTGACCAACGGCACGGCGTTCCAGGAGCTGGAGAGCCGGCTGTGGACCAAGCTGGACCTCACCCCGGGCTCCGTCTTCCTCCAGGACCCCTTCTTCAACGCCGACGCCTACATGCAGGTCCAGGTCAAGCTTTTCCCCTCCGGCTCCGCCTACTTCAACCGCTCCGAGGTCATGCGCATCGGCTTCGACCTCAGCAACCAGACCTTCAAGCCGCCCAAGGAGTTTGGCCCTTACTACTTCATCGCCTCGCCCTACCCCTTCCCAGAGGAGCGGTCGTCGTCGAGGAGCAAGGGTGCCATCATCGGGATCGCGGCCGGATGCGGCGTGCTGGTGGTGGCGCTCGTGGGCGCGGCGGTGTACGCGCTCGTGCAGCGGCGGCGCGCGCAGAAGGCGAGGGAGGAGCTGGGCGGGCCGTTCGCGTCGTGGAAACGGAGCGAGGAGAGGGGCGGGGCGCCGCGGCTGAAGGGGGCGAGGTGGTTCTCGTACGAGGAGCTGAAGCGGAGCACCAACAACTTCGCGGAGGCGAACGAGCTCGGGTACGGAGGGTACGGCAAGGTGTACAGGGGGATGCTGCCGACGGGGACGTTCATCGCCATCAAGAGGGCGCAGCAGGGGTCGATGCAGGGCGGGCACGAGTTCAAGACGGAGATCGAGCTGCTCTCCCGCGTCCACCACAAGAACCTCGTCGGCCTCGTCGGATTCTGCTTCGAGCAGGGCGAGCAGATGCTCGTCTACGAGTTCATGTCCGCCGGCACCCTCCGCGACAGCCTCTCCGGGAAGAGCGGGCTGCACCTTGACTGGAAGAAGCGGCTGCGGGTAGCGCTCGGCGCGGCGCGTGGGCTGGCCTACCTCCACGAGCTCGCCGACCCGCCCATCATCCACAGGGACGTCAAGTCCAGCAACATCCTCATGGACGAGCACCTCACGGCCAAGGTCGCCGACTTCGGCCTCTCCAAGCTAGTGTCCGACACCGAGAGGGGCCACGTCAGCACCCAAGTCAAAGGAACACTGGGCTACCTGGATCCCGAGTACTACATGTCCCAGCAGCTGACCGAGAAGAGCGACGTGTACAGCTTCGGGGTGGTGATGCTCGAGCTGATCATCGCCAAGCAGCCGATCGAGAAAGGGAAGTACATCGTCCGGGAGGTGAAGCGGGCGTTCGACGCCGGCGACGCCGAGTTCTGCGGGATCAAGGACATGATAGACGCCAGGATCATGAACACCAACCACCTGGCCGCATTCAGCAAGTTCGTCCAGCTGGCGCTCCGGTGCGTCGAGGAGGTGGCCGGCGCGCGGCCGTCGATGAGCGACGTCGTCAAGGAGATCGAGATGATGCTGCAGAGCGAGGGGCTGAGCAGCGCCTCCACGTCGGCGTCGACGTCCGCGACGGAGTTCGACGTCACCAAGGGTGCCCCACGCCATCCTTACAACGATCCTCTCCCGAAGAAGGACAAGGACATGAGCACCGACTCGTTCGACTACAGCGGAGGGTATTCCTTCCAATCCAAGATCGAACCGAAGTAG
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| Protein seq | MAAPVPGGCARMRRVVLGVVLLLSVCVRASHAVTDSQDTSVLRALMDQWQNAPPTWGQSDDPCSDSPWDGVVCSNNRVISIKISTMGIKGVLAADIGQLTELQSLDMSFNKDLGGVLTPNIGNLKQLTTLILAGCSFHGNIPDELGSLPKLSYMALNSNQFSGKIPASMGNLSNLYWFDIADNQLSGPLPISTNGGMGLDKLFKTKHFHFNKNQLSGPIPDALFSPEMTLIHLLFDGNKFTGNIPDSLGLVTTLEVVRLDRNSLSGPVPENLNNLTKVNELNLANNQLTGPLPDLSQMTQLNYVDLSNNTFDPSPSPQWFWRLPQLSALIIQSGRLYGTVPMRLFSGPQLQQVILDGNAFNGTLDMGKYISSELSIVSLKDNQLSSVTVTASYNGTLSLAGNPVCDRLPNTQYCNVTQRAAAAPYSTSLVKCFSGTCNAVGESMSPQSCACAYPYQGVMYFRAPFFGDVTNGTAFQELESRLWTKLDLTPGSVFLQDPFFNADAYMQVQVKLFPSGSAYFNRSEVMRIGFDLSNQTFKPPKEFGPYYFIASPYPFPEERSSSRSKGAIIGIAAGCGVLVVALVGAAVYALVQRRRAQKAREELGGPFASWKRSEERGGAPRLKGARWFSYEELKRSTNNFAEANELGYGGYGKVYRGMLPTGTFIAIKRAQQGSMQGGHEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMSAGTLRDSLSGKSGLHLDWKKRLRVALGAARGLAYLHELADPPIIHRDVKSSNILMDEHLTAKVADFGLSKLVSDTERGHVSTQVKGTLGYLDPEYYMSQQLTEKSDVYSFGVVMLELIIAKQPIEKGKYIVREVKRAFDAGDAEFCGIKDMIDARIMNTNHLAAFSKFVQLALRCVEEVAGARPSMSDVVKEIEMMLQSEGLSSASTSASTSATEFDVTKGAPRHPYNDPLPKKDKDMSTDSFDYSGGYSFQSKIEPK |
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| Function | Probable leucine-rich repeat receptor-like protein kinase At5g49770 [UniProtKB/Swiss-Prot:Q9LT96] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_03g0329700 | OsNip_03t0329700-01 | Chr03 | 12117813 | 12122998 | + | RAP2018-11-26 | ||
| CDS seq | ATGGCGGCACCGGTGCCCGGAGGCTGTGCGAGGATGAGACGGGTGGTTCTCGGCGTCGTGCTGCTGCTCTCGGTGTGCGTCCGAGCAAGCCATGCCGTGACGGATAGCCAGGACACATCTGTTCTCCGCGCGTTGATGGATCAGTGGCAGAACGCGCCGCCAACGTGGGGGCAGTCTGACGACCCATGCAGCGATTCGCCATGGGATGGAGTGGTATGCAGCAACAACAGAGTGATCTCCATTAAAATTTCTACCATGGGCATCAAGGGAGTTCTAGCTGCTGACATAGGGCAACTGACCGAGCTTCAATCCCTGGACATGTCATTTAATAAGGATCTTGGCGGCGTGCTCACTCCAAACATCGGAAACTTGAAGCAGCTTACCACCTTGATTCTGGCCGGTTGCAGTTTCCATGGCAACATCCCGGATGAGCTAGGGAGTCTGCCAAAATTGTCTTACATGGCATTGAACTCAAATCAGTTCTCTGGAAAAATACCAGCTTCTATGGGCAATCTTTCCAACCTCTATTGGTTCGACATCGCCGACAATCAATTGTCAGGTCCCTTACCAATCTCGACAAATGGTGGAATGGGTTTAGACAAGCTTTTCAAAACCAAACACTTCCACTTCAACAAGAACCAATTGTCCGGTCCAATCCCAGATGCCCTCTTCAGTCCTGAGATGACACTGATCCATTTGCTTTTTGATGGAAACAAATTCACTGGTAATATCCCAGACTCTCTTGGGCTTGTTACTACACTTGAAGTTGTCCGGCTTGATAGGAATTCGCTCTCAGGGCCAGTTCCAGAGAATCTGAATAACCTCACTAAAGTAAATGAGCTCAATTTAGCCAACAACCAGCTTACCGGCCCATTGCCTGATCTATCTCAGATGACCCAACTCAATTATGTGGATCTGAGCAACAACACGTTCGACCCTTCTCCTAGCCCACAATGGTTTTGGAGGCTGCCACAGCTCTCAGCTCTGATCATACAATCCGGGAGGCTTTACGGCACGGTGCCGATGAGGCTGTTCAGCGGCCCACAGTTGCAGCAAGTGATCCTCGACGGCAACGCGTTCAACGGCACCCTCGACATGGGCAAGTACATCAGCAGCGAGCTGAGCATCGTCAGCCTCAAGGACAACCAGCTCTCCTCCGTCACGGTCACCGCCAGCTACAACGGCACCCTTTCGCTGGCCGGGAACCCGGTGTGCGACCGGCTGCCGAACACGCAGTACTGCAACGTGACGCAGCGCGCCGCGGCGGCGCCGTACTCGACGAGCCTTGTCAAGTGCTTCTCGGGGACGTGCAACGCGGTGGGGGAGAGCATGAGCCCGCAGAGCTGCGCGTGCGCGTACCCGTACCAGGGGGTGATGTACTTCAGGGCGCCGTTCTTCGGGGACGTGACCAACGGCACGGCGTTCCAGGAGCTGGAGAGCCGGCTGTGGACCAAGCTGGACCTCACCCCGGGCTCCGTCTTCCTCCAGGACCCCTTCTTCAACGCCGACGCCTACATGCAGGTCCAGGTCAAGCTTTTCCCCTCCGGCTCCGCCTACTTCAACCGCTCCGAGGTCATGCGCATCGGCTTCGACCTCAGCAACCAGACCTTCAAGCCGCCCAAGGAGTTTGGCCCTTACTACTTCATCGCCTCGCCCTACCCCTTCCCAGAGGAGCGGTCGTCGTCGAGGAGCAAGGGTGCCATCATCGGGATCGCGGCCGGATGCGGCGTGCTGGTGGTGGCGCTCGTGGGCGCGGCGGTGTACGCGCTCGTGCAGCGGCGGCGCGCGCAGAAGGCGAGGGAGGAGCTGGGCGGGCCGTTCGCGTCGTGGAAACGGAGCGAGGAGAGGGGCGGGGCGCCGCGGCTGAAGGGGGCGAGGTGGTTCTCGTACGAGGAGCTGAAGCGGAGCACCAACAACTTCGCGGAGGCGAACGAGCTCGGGTACGGAGGGTACGGCAAGGTGTACAGGGGGATGCTGCCGACGGGGACGTTCATCGCCATCAAGAGGGCGCAGCAGGGGTCGATGCAGGGCGGGCACGAGTTCAAGACGGAGATCGAGCTGCTCTCCCGCGTCCACCACAAGAACCTCGTCGGCCTCGTCGGATTCTGCTTCGAGCAGGGCGAGCAGATGCTCGTCTACGAGTTCATGTCCGCCGGCACCCTCCGCGACAGCCTCTCCGGGAAGAGCGGGCTGCACCTTGACTGGAAGAAGCGGCTGCGGGTAGCGCTCGGCGCGGCGCGTGGGCTGGCCTACCTCCACGAGCTCGCCGACCCGCCCATCATCCACAGGGACGTCAAGTCCAGCAACATCCTCATGGACGAGCACCTCACGGCCAAGGTCGCCGACTTCGGCCTCTCCAAGCTAGTGTCCGACACCGAGAGGGGCCACGTCAGCACCCAAGTCAAAGGAACACTGGGCTACCTGGATCCCGAGTACTACATGTCCCAGCAGCTGACCGAGAAGAGCGACGTGTACAGCTTCGGGGTGGTGATGCTCGAGCTGATCATCGCCAAGCAGCCGATCGAGAAAGGGAAGTACATCGTCCGGGAGGTGAAGCGGGCGTTCGACGCCGGCGACGCCGAGTTCTGCGGGATCAAGGACATGATAGACGCCAGGATCATGAACACCAACCACCTGGCCGCATTCAGCAAGTTCGTCCAGCTGGCGCTCCGGTGCGTCGAGGAGGTGGCCGGCGCGCGGCCGTCGATGAGCGACGTCGTCAAGGAGATCGAGATGATGCTGCAGAGCGAGGGGCTGAGCAGCGCCTCCACGTCGGCGTCGACGTCCGCGACGGAGTTCGACGTCACCAAGGGTGCCCCACGCCATCCTTACAACGATCCTCTCCCGAAGAAGGACAAGGACATGAGCACCGACTCGTTCGACTACAGCGGAGGGTATTCCTTCCAATCCAAGATCGAACCGAAGTAG
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| Protein seq | MAAPVPGGCARMRRVVLGVVLLLSVCVRASHAVTDSQDTSVLRALMDQWQNAPPTWGQSDDPCSDSPWDGVVCSNNRVISIKISTMGIKGVLAADIGQLTELQSLDMSFNKDLGGVLTPNIGNLKQLTTLILAGCSFHGNIPDELGSLPKLSYMALNSNQFSGKIPASMGNLSNLYWFDIADNQLSGPLPISTNGGMGLDKLFKTKHFHFNKNQLSGPIPDALFSPEMTLIHLLFDGNKFTGNIPDSLGLVTTLEVVRLDRNSLSGPVPENLNNLTKVNELNLANNQLTGPLPDLSQMTQLNYVDLSNNTFDPSPSPQWFWRLPQLSALIIQSGRLYGTVPMRLFSGPQLQQVILDGNAFNGTLDMGKYISSELSIVSLKDNQLSSVTVTASYNGTLSLAGNPVCDRLPNTQYCNVTQRAAAAPYSTSLVKCFSGTCNAVGESMSPQSCACAYPYQGVMYFRAPFFGDVTNGTAFQELESRLWTKLDLTPGSVFLQDPFFNADAYMQVQVKLFPSGSAYFNRSEVMRIGFDLSNQTFKPPKEFGPYYFIASPYPFPEERSSSRSKGAIIGIAAGCGVLVVALVGAAVYALVQRRRAQKAREELGGPFASWKRSEERGGAPRLKGARWFSYEELKRSTNNFAEANELGYGGYGKVYRGMLPTGTFIAIKRAQQGSMQGGHEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMSAGTLRDSLSGKSGLHLDWKKRLRVALGAARGLAYLHELADPPIIHRDVKSSNILMDEHLTAKVADFGLSKLVSDTERGHVSTQVKGTLGYLDPEYYMSQQLTEKSDVYSFGVVMLELIIAKQPIEKGKYIVREVKRAFDAGDAEFCGIKDMIDARIMNTNHLAAFSKFVQLALRCVEEVAGARPSMSDVVKEIEMMLQSEGLSSASTSASTSATEFDVTKGAPRHPYNDPLPKKDKDMSTDSFDYSGGYSFQSKIEPK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.996898 | 2.358529 | 3.039604 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0681100 | SBH | 1.374032 | 1.603315 | 3.983841 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g21230 | RBH | 1.332669 | 1.526463 | 0.752935 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0329700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0016440 | RBH | 1.334021 | 16.449913 | 1.651751 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0016280 | RBH | 0.096823 | 1.469902 | 0.914553 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0016300 | RBH | 2.221219 | 9.435754 | 4.149051 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0016290 | RBH | 0.426696 | 0.086115 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0016070 | RBH | 6.416119 | 12.659724 | 3.594771 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0200600 | RBH | 4.375225 | 7.406896 | 0.697979 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0015950 | RBH | 0.309104 | 0.049782 | 0.676805 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0204800 | RBH | 4.8588985 | 1.664369 | 1.3373965 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0016210 | RBH | 0.256276 | 0.077369 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0016220 | RBH | 0.679566 | 1.887969 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0016260 | RBH | 5.829209 | 7.682912 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0016140 | RBH | 0.378699 | 1.117388 | 1.114052 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0016060 | RBH | 0.036725 | 7.732779 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G016020 | RBH | 0.885854 | 0.350175 | 3.410383 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0015940 | RBH | 1.196533 | 4.983344 | 1.669973 |
