Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_03g0276300 | OGI:03025360 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr03:9359575-9359994 | ||||||||
| Gene Symbol | DOF14, OsDof14, Dof14, OsDof-14 | ||||||||||
| DNA seq | CCATTGCCGCCGTTGTTGTTACCCCAGACACCATCTCCTTGGCGTAGAGCCGCCATGTACTGCCTCTGCAGGCTCATCTCCAGCCCTTTGCTATCTTCCAGTTTCATTGAACCTTCCTGCCTTGACGTGGTGGCTGTAGCACTGGTCTGCCCTAACGTGAACGCCGCCGCCGCCGTTGCTCCGGTGCCTGCTGCTCGAGTAGCTTCCAGTCCCAGTTGGTACATCGGCGGCGGCGGCGGAAGCTCGAGTGCTCCTCCGAGGAACGGGAACTGATGCTGTTGTGGCTGCTGCTGCTGCTGCTGCTGCACTCTCCACTGCTCGAGTGACGCGCCAATGGTGGCGCCGCCGCCGCTTGCCACCGGGAACTGGTCCGCCGTGTCCACGTGGTGGTGCATGCCGCCGAGAGGCTGGAATCCGGCG
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| CDS seq | GCCGGATTCCAGCCTCTCGGCGGCATGCACCACCACGTGGACACGGCGGACCAGTTCCCGGTGGCAAGCGGCGGCGGCGCCACCATTGGCGCGTCACTCGAGCAGTGGAGAGTGCAGCAGCAGCAGCAGCAGCAGCCACAACAGCATCAGTTCCCGTTCCTCGGAGGAGCACTCGAGCTTCCGCCGCCGCCGCCGATGTACCAACTGGGACTGGAAGCTACTCGAGCAGCAGGCACCGGAGCAACGGCGGCGGCGGCGTTCACGTTAGGGCAGACCAGTGCTACAGCCACCACGTCAAGGCAGGAAGGTTCAATGAAACTGGAAGATAGCAAAGGGCTGGAGATGAGCCTGCAGAGGCAGTACATGGCGGCTCTACGCCAAGGAGATGGTGTCTGGGGTAACAACAACGGCGGCAATGG
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| Protein seq | AGFQPLGGMHHHVDTADQFPVASGGGATIGASLEQWRVQQQQQQQPQQHQFPFLGGALELPPPPPMYQLGLEATRAAGTGATAAAAFTLGQTSATATTSRQEGSMKLEDSKGLEMSLQRQYMAALRQGDGVWGNNNGGN |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_03g0276300 | OsNip_03t0276300-00 | Chr03 | 9359575 | 9359994 | - | RAP2018-11-26 | ||
| CDS seq | GCCGGATTCCAGCCTCTCGGCGGCATGCACCACCACGTGGACACGGCGGACCAGTTCCCGGTGGCAAGCGGCGGCGGCGCCACCATTGGCGCGTCACTCGAGCAGTGGAGAGTGCAGCAGCAGCAGCAGCAGCAGCCACAACAGCATCAGTTCCCGTTCCTCGGAGGAGCACTCGAGCTTCCGCCGCCGCCGCCGATGTACCAACTGGGACTGGAAGCTACTCGAGCAGCAGGCACCGGAGCAACGGCGGCGGCGGCGTTCACGTTAGGGCAGACCAGTGCTACAGCCACCACGTCAAGGCAGGAAGGTTCAATGAAACTGGAAGATAGCAAAGGGCTGGAGATGAGCCTGCAGAGGCAGTACATGGCGGCTCTACGCCAAGGAGATGGTGTCTGGGGTAACAACAACGGCGGCAATGG
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| Protein seq | AGFQPLGGMHHHVDTADQFPVASGGGATIGASLEQWRVQQQQQQQPQQHQFPFLGGALELPPPPPMYQLGLEATRAAGTGATAAAAFTLGQTSATATTSRQEGSMKLEDSKGLEMSLQRQYMAALRQGDGVWGNNNGGN |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.409290 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g16850 | RBH | 0.0 | 0.0 | 0.212769 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0276300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0012600 | RBH | 0.000000 | 0.0 | 0.523040 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0012430 | RBH | 0.0 | 2.849090 | 2.570297 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0159100 | RBH | 1.097413 | 3.3676775 | 2.1511725 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0012330 | RBH | 0.000000 | 0.111493 | 0.191179 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0159900 | RBH | 0.87008 | 1.815898 | 4.4044915 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0012480 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0012520 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0012560 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0012450 | RBH | 0.000000 | 0.198443 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0012420 | RBH | 0.0 | 2.296713 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G012380 | RBH | 0.0 | 0.0 | 0.525550 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0012240 | RBH | 0.0 | 3.261594 | 0.0 |
