Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_02g0818500 | OGI:02098620 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr02:35113637-35118793 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | AGACCATTTATTTTTCTAGCATACATATTTGTTTTGACAAATCCAAATACATATATTTGTGGTTGTAGTCTTAAAATGCTGAGCACATGCATTCCCAAAAAGGCAAATGAGAGAGAGAACTGGAGGGGGCACTTGTTAGTTGCATTAGCTCATGTGCTTCTAATGGAATGGTAATTCCCACGCACTTCAACTGGCCTACACAACTGAATTAGAAATTACCTAAGGACATAACTGAATTAAAAATGATATCAAGCAAATTTTTTCGGGGAAGCGTCTGGTCTTCGAACAAATTTTGCAAAATGTTCAGCGCTTCCAATCCAGTGCAATGAGACGGATCTCCAAACTCTCCATGATGAATTGCCATGTCAGGTCGCTTCCTTCCCTTGCACATATCTAGGATTGCCTCTGTCCATCTTCCGCCTGAAGAAGGAAGACTTGCAGCCACTGGTTGACAAAATCGCGCGCCGTTTGCCTTCTTGGATGTCTCACTTGATGACGCCTATTGGCCGGACTACCATGGTGAACGCTGTACTAAGCTCAATTCCCATCTACCTACTCATGGCCATCAATGCACCGAAGTGGGTTATCAAAGGGATTGACAAGATCCGTCGCAGCTTTCTTTGGGCTGGAAAAGCTTCTGCAAACGGCGGCGTCTGTTGGGTCGCATGGGCTCGAGTTTGCTCGCCCAAGGAGTATGGTGGTTTGGGGATTCCTGATCTAGAGAGGTTGGGAATCGCCCTGAGGTCACGATGGCTCTAGCAGCAAAGAACTTCACCGGAAAAGCCGTGGCAAGGGCTTAGTATTCCGGTCTCGCAGAAGGAGCGCAATCTAGTATCGATTTCCATGGTATGCTTGGTAGGGGATGGGAATTCAGTGCTGTTCTGGGAGGATTGCTAGCTGCAGGGTTCCTCCATTCGGTCGCTAGCGCCGGCTGTCTATGCTGCAGTCCCTGCTCGTCTCCGGAATCGTCGCACGGTGGCCGAGGCAATGACTGACAGAAGATGGATCCAGGACATCAGTTCCGCGTTGGGTATTCAAGCGATCCTAGAGTATTTCAAGCTTTGGGATTGCCTTCGGTCAGTGCAGCTTTCCGAAGAGCCGGACTCTCTATCTTGGCGGTGGGAGACCTCAGGAGAATACTCTTCCCGCTCGGCTTATCGTGTTCTCTTTTTTGGAAGAACTCGTCTCCAGCACAAGCCAATTTGGCAATCTTTGGCGCCCCCTCGCTGTCGCTACTTCCTTTGGTTGGTAGCTCTTAACCGTTGCTGGACAGCAGACCGTCTCCGGAGTCGTGGTTTGTCACACCTGGATCGATGTGTTCTGTGTGATCAATGCGAAGAGACGATTGATCATCTCTTGGTCGCATGCCCGGAGTCGTGGCAACTGTGGTGGGTTGTGCTCAGAGCTATCGGGCATTCGGAGTGCTTACCGCTCAATGAACACTCTTTCCTCTCATGGTTGTGCGACTGTCTCGGTGGATTCACCTTTCTGGCTTCACCTTTTTGGCTCTCGTGACTGAAAGGATGCATCACCCTTACCCATGCATGGCATGGGAATCTGATTTGAACAGCTGGGTTCTCGTAAGCTGTCCTGATTATTGTTGTTTGGCCCATATCACCACTTGTTCCCCAGACCGCTATCACTTTAAGGTCATGATCCTCCTTGTTGATTAGCTGGACGAGATCCACTCTCTGATTGTCCTGTTTTGCGGCACGCCTTGCATCATCAATGCCGAATATGGCTGCAGCAATAACGCTAGATTGCTCAGCTGAGGTGATGGTGGCCTTGGAGCCGGAGCCCTTGATGAGGTGGTACCGCGCATTTCTCTGGCTGACATCCTCGACCTTGTTCCTGAGCTCCTTCATCTGCTTGGCCACACGGCGCCGCTCGAGCAGCGTGCGAGGGAATCGCCACCAGGATGGCTTCTTCAGATGAACAGCAAAATCCTGGAGGCTGTCCTCAACGTCATAGGCAGTGTCACGGACTTGCTTCACCCAAGTCTTGACCACTTTGCTGTTATCTTGCTCCTCGTGCGCCTCCATCATGAAAGACCTCATCATCTCAAGCTCATCTGCAACAAAGGTGTGGTCTTTTTGGATACCAAGCTGCAAGGCCACCTCCTCGGCAAATGCAGATTTTGCGTAGCCAAGCGCTCCATTCAGCACGGATTTGCCCACACTCAGCGTTGTTGCCTCCATTGTTCTGTTGCTAAAGCATCAAAAGCAACAAGTTTTAAAATAAAAAAGAATTATCGAGAATTTGCGTGGCTGAAGCTAAAGCAACTACTTTTAAGAAAGAAAATAAATGACGAGAGTGAGGGAGTCAGAGTAAAGAAAAGGACTTGGTGTTGCTTCCTTTGATCCTTTCAGATGACCTTCGTTTTCCACCTATAGGCTGTAGCATACAGAAAGCGTCGCCTGCATCGATGACCACTCCGTTCCCGGCGGCCCACCTCCACCTCCAGCAACCTAAGGCCCTTTTGCCCCCCCCCCCCCCCCAACACCAACACACACACACACAAAGGAATAAGTCCACTATCCCTCCCTCAACATGGCCGTGTATGAATACCATCCCTCAACCACAAAACCAGGTATAACCCGTCCCCCAACTCCGAAAACCGTTGCAAATCAACTCCCCGGGTGGTTTTGGAGGCGGTTTTGTCCTACGTGGCATCTTTGACCCTGTTGACTTGCTGAGTCAGCAGGTGGGACCCACCTGTCAGTGGCAAGGATAAAAGAAAAATGGTGGGGCCCACTATCAACCACACTTCTCTTCTTCTCTCGCTCCTCCGGCCGATCCCGACGGCTAGGAGCTCGCCGCCATCACGGTGCCTAGCCACCGCGACGATGCTGCGGGGAGAGGCTTGCCGGGGACAACTGTGGATGGGCAGAAGCGCGGCGAGACCGAGGCCGGCATGGCGGTCGTCCCGAGACCCCGCGGCGAGCAGCGAGAGTGTGCTGAGCGCCACGAGGAGGAGCAGCGCCGCCCGTACCACCATCATATACGACAACTTCTCCCCGCCGCGCTTTCCCCTCCTCCTGCACCTCTGTCTGCACATCAGCGCACATGGATTGCCGGCGGCAGCCCGTGGCAATGCGGCATAGCGTGATTCGTGCGGCCGGCCTCGGGGGAGACTTGGTGGGGGCAGCGCGTGCGACGGCGGTGGCAAGACCAATTGCTGCAAAAATTCCATCTCCAGTTACATCTACAAACGGCTCCAGGAAGCAAGCAGTCAGATATAAAACAATGCGAGATCAATGATTATCCAGCAACAAAGCTGCAGATAGCCAGGTACCCCAACAATAGTATCAATCAGAAAATTGCCGGGTGGCATACCATGCTGACCAAATTTACTAAGCTATCGATCAGCAATTTGGTCGACTGTATTGTGATTTTTCAAGCGTGTATGATACTATGATGCCTATGATCAGCACTCAATCACTCTGCCCAAGCACGCAAAACACTGTCACCAGAGAATCCCCAATCGATTTGCAAACCCATATGGCACGCACCAGTGTAGGCGGCGAAGCCAAGGGGGAAGGCCGTCGCGCACATGGACGCGGCGGAGAAGACGGGCTGGCCCACCTGCAGGAGAGGCCGTTCCACGTCCCAGGGTTGCCGGCCAGCTCCCTCATCTCGTTTGCCCTCCTCTGCTCCGGATCTGAGGAGGGGGATGGCGGCAGCGGTGAAGGCGGTAGGGTGGGGATGGGGGCGGGGAGGAGGAGGCGGAGCGGAGCGTGGCACCGAGGGGCGGGCGAGCAAGAGCGGGGGCGCGGCCTCGACGGCTGGCGGCGGGGTGAGGCGGCACGTCACCGCCGGGATCGGCCGGAGGAGCGAGAGAAGAAGAGAAGTGTGGTTGACAGTGGGCCCCACCGTTTTTCTTTTATCATTGTCACTAACAGGTGGGTCCCACCTGCTGACTCAGGAAGTCAACAGGATCAAAGATGCCACGTAGGACAAAACCACCTCCAAAACCGCCCGGGGAGTTGATTTGCAACGGTTTTCGAAGTTGGGGGATGGGTTATACCCGATTTTGCGGTTGAGGGATGCTATTCACACACAGCCATGAGTTGAGGGAGGGAAAGTGGACTTATTCCCACACAAATGTCTCTCTGGCCCATCATCATGGCCCGCTCCTTGCCGCGCACCACCGCTATAGGGAGGAGAGCCTGGCCTCCAGGGTCGGACTCTCCCCTTCTCCATCCCTCCTCGCTTCTTCCCCCTCTTCCTCCCCTCACCCCTCCTATCTGGAGTTCGTGCGGTGGCCTTGCCGTGCCCCATGCCTCTTTGCTTCTTCAAATAGAATGACATGCAATGTTTTTGCGCGTACAAAAAAAAAAGATTCCATCGTTTCTTTCTCTCATGCAAAACCATGCATGTGACTTTCATATCATACGGGTGCTAAATGACAAAAGAAGGAAAATTTTGTCTTCTTGTTTTTTACCTTTCTAGCGTATGATAAGAATGAATGCTCATTGGATACACATTCTCCATATTATGCTCTAGAGAGAACTCGAACCTCCATGCTCTTTTAGCACGAGATTTTGAGTCTCACATGTCTTCCATTTCGGCATCTTAAAAATGAATTATATTCCATAAATATGACATCTTGAAAGGGAATTGTGTTCCAGCTACGGCAGCTAGTAAAATACAGGGAAAATAACGCAAGGGGAAAAGGAGCAAATGGGCTGGTGTTCATCCAGGCAATTGGCAGTACCTGAATCTGTGAACACCTTCAAATCAGGGGTGGATCTATAATCTTCGCGTCTGATGTTCACGAGTGGAACAGACCAGCAGCACGCACAAGGCAAATGTGATGCAAAATAGGAGTATGTTCTGACTGTGAGTACCAACACTAAAATTCCAATAAGTCATATTACCGACTCTTAGGCTTTCATCACTATCTAATGCATCCCAAAATTAGAAGCTCAAAAACAAACAATCTGAAAGAAACTGCTCGAAATGTATGAAGTACTACTACACCTTCTGTGGCCTATGACTATGAGAGGGTGGTCGCAGAGCCCGCAAGCTTGAGGTGAGTGACGGCGGATGCGTGACGCCAAGGCACCGTTGCCCGCAGCTGCTCGCCGACGAACCACGCCTGCTCCCTGACCGCCGTTGCCTCTCACACTCGGTGCCTCGGTAGTCAGTGCTCAG
More
|
||||||||||
| CDS seq | ATGGAGGCAACAACGCTGAGTGTGGGCAAATCCGTGCTGAATGGAGCGCTTGGCTACGCAAAATCTGCATTTGCCGAGGAGGTGGCCTTGCAGCTTGGTATCCAAAAAGACCACACCTTTGTTGCAGATGAGCTTGAGATGATGAGGTCTTTCATGATGGAGGCGCACGAGGAGCAAGATAACAGCAAAGTGGTCAAGACTTGGGTGAAGCAAGTCCGTGACACTGCCTATGACGTTGAGGACAGCCTCCAGGATTTTGCTGTTCATCTGAAGAAGCCATCCTGGTGGCGATTCCCTCGCACGCTGCTCGAGCGGCGCCGTGTGGCCAAGCAGATGAAGGAGCTCAGGAACAAGGTCGAGGATGTCAGCCAGAGAAATGCGCGGTACCACCTCATCAAGGGCTCCGGCTCCAAGGCCACCATCACCTCAGCTGAGCAATCTAGCGTTATTGCTGCAGCCATATTCGGCATTGATGATGCAAGGCGTGCCGCAAAACAGGACAATCAGAGAGTGGATCTCGTCCAGCTAATCAACAAGGAGGATCATGACCTTAAAGTGATAGCGGTCTGGGGAACAAGTGGTGATATGGGCCAAACAACAATAATCAGGACAGCTTACGAGAACCCAGCTGTTCAAATCAGATTCCCATGCCATGCATGGGTAAGGGTGATGCATCCTTTCAGTCACGAGAGCCAAAAAGGTGAAGCCAGAAAGGTGAATCCACCGAGACAGTCGCACAACCATGAGAGGAAAGAGTGTTCATTGAGCGGTAAGCACTCCGAATGCCCGATAGCTCTGAGCACAACCCACCACAGTTGCCACGACTCCGGGCATGCGACCAAGAGATGA
More
|
||||||||||
| Protein seq | MEATTLSVGKSVLNGALGYAKSAFAEEVALQLGIQKDHTFVADELEMMRSFMMEAHEEQDNSKVVKTWVKQVRDTAYDVEDSLQDFAVHLKKPSWWRFPRTLLERRRVAKQMKELRNKVEDVSQRNARYHLIKGSGSKATITSAEQSSVIAAAIFGIDDARRAAKQDNQRVDLVQLINKEDHDLKVIAVWGTSGDMGQTTIIRTAYENPAVQIRFPCHAWVRVMHPFSHESQKGEARKVNPPRQSHNHERKECSLSGKHSECPIALSTTHHSCHDSGHATKR |
||||||||||
| Function | Disease resistance protein Piks-2 [UniProtKB/Swiss-Prot:P0DO10] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0818500 | OsNip_02t0818500-03 | Chr02 | 35113637 | 35116084 | - | RAP2018-11-26 | ||
| CDS seq | ATGGAGGCAACAACGCTGAGTGTGGGCAAATCCGTGCTGAATGGAGCGCTTGGCTACGCAAAATCTGCATTTGCCGAGGAGGTGGCCTTGCAGCTTGGTATCCAAAAAGACCACACCTTTGTTGCAGATGAGCTTGAGATGATGAGGTCTTTCATGATGGAGGCGCACGAGGAGCAAGATAACAGCAAAGTGGTCAAGACTTGGGTGAAGCAAGTCCGTGACACTGCCTATGACGTTGAGGACAGCCTCCAGGATTTTGCTGTTCATCTGAAGAAGCCATCCTGGTGGCGATTCCCTCGCACGCTGCTCGAGCGGCGCCGTGTGGCCAAGCAGATGAAGGAGCTCAGGAACAAGGTCGAGGATGTCAGCCAGAGAAATGCGCGGTACCACCTCATCAAGGGCTCCGGCTCCAAGGCCACCATCACCTCAGCTGAGCAATCTAGCGTTATTGCTGCAGCCATATTCGGCATTGATGATGCAAGGCGTGCCGCAAAACAGGACAATCAGAGAGTGGATCTCGTCCAGCTAATCAACAAGGAGGATCATGACCTTAAAGTGATAGCGGTCTGGGGAACAAGTGGTGATATGGGCCAAACAACAATAATCAGGACAGCTTACGAGAACCCAGCTGTTCAAATCAGATTCCCATGCCATGCATGGGTAAGGGTGATGCATCCTTTCAGTCACGAGAGCCAAAAAGGTGAAGCCAGAAAGGTGAATCCACCGAGACAGTCGCACAACCATGAGAGGAAAGAGTGTTCATTGAGCGGTAAGCACTCCGAATGCCCGATAGCTCTGAGCACAACCCACCACAGTTGCCACGACTCCGGGCATGCGACCAAGAGATGA
More
|
|||||||
| Protein seq | MEATTLSVGKSVLNGALGYAKSAFAEEVALQLGIQKDHTFVADELEMMRSFMMEAHEEQDNSKVVKTWVKQVRDTAYDVEDSLQDFAVHLKKPSWWRFPRTLLERRRVAKQMKELRNKVEDVSQRNARYHLIKGSGSKATITSAEQSSVIAAAIFGIDDARRAAKQDNQRVDLVQLINKEDHDLKVIAVWGTSGDMGQTTIIRTAYENPAVQIRFPCHAWVRVMHPFSHESQKGEARKVNPPRQSHNHERKECSLSGKHSECPIALSTTHHSCHDSGHATKR
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0818500 | OsNip_02t0818500-02 | Chr02 | 35115995 | 35118769 | - | RAP2018-11-26 | ||
| CDS seq | ATGTGCAGACAGAGGTGCAGGAGGAGGGGAAAGCGCGGCGGGGAGAAGTTGTCGTATATGATGGTGGTACGGGCGGCGCTGCTCCTCCTCGTGGCGCTCAGCACACTCTCGCTGCTCGCCGCGGGGTCTCGGGACGACCGCCATGCCGGCCTCGGTCTCGCCGCGCTTCTGCCCATCCACAGTTGTCCCCGGCAAGCCTCTCCCCGCAGCATCGTCGCGGTGGCTAGGCACCGTGATGGCGGCGAGCTCCTAGCCGTCGGGATCGGCCGGAGGAGCGAGAGAAGAAGAGAAGTGTGGTTGATAGTGGGCCCCACCATTTTTCTTTTATCCTTGCCACTGACAGGTGGGTCCCACCTGCTGACTCAGCAAGTCAACAGGGTCAAAGATGCCACGTAG
More
|
|||||||
| Protein seq | MCRQRCRRRGKRGGEKLSYMMVVRAALLLLVALSTLSLLAAGSRDDRHAGLGLAALLPIHSCPRQASPRSIVAVARHRDGGELLAVGIGRRSERRREVWLIVGPTIFLLSLPLTGGSHLLTQQVNRVKDAT |
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0818500 | OsNip_02t0818500-01 | Chr02 | 35118205 | 35118793 | - | RAP2018-11-26 | ||
| CDS seq | - |
|||||||
| Protein seq | - |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.658022 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g57310 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0818500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0038770 | SBH | 0.058725 | 1.989172 | 0.479221 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0038800 | SBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0038670 | SBH | 0.407958 | 1.909748 | 2.566416 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0038280 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0038340 | SBH | 1.277029 | 0.843036 | 6.294262 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0572600 | RBH | 2.3373435 | 12.372116 | 8.0919105 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0038010 | SBH | 0.055218 | 0.039342 | 0.203820 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0603500 | RBH | 0.0160425 | 0.8316825 | 0.009791 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0038320 | SBH | 0.000000 | 0.029762 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0038230 | SBH | 0.383285 | 4.849597 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0038350 | RBH | 5.159230 | 17.497448 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0038380 | SBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0038020 | RBH | 0.0 | 2.077546 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G038700 | SBH | 0.044022 | 0.0 | 0.107982 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0038580 | SBH | 0.463656 | 2.284405 | 0.619654 |
