Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_02g0815900 | OGI:02098280 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr02:34945082-34952009 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTCGGAAGGAATGCTAACACGGTAACACCTGACATGTACAGCCTCGGCAACGAGGGGAGGGTCGAATAATCGAATTCTTTAACAACCCATTACAACATGATGCCCAGAATTCTGGCAAGAAATTTTCCTACCCAGATTACACAAATCAGAGATGCATGAGGAATGAACCGCAAATCGCAAAATTAGAGAGCACCTGCCAACCCCATATCCTCATTTGCTTCTTTGGGGAGGCAGAAATTAAGGCAAATGAAAACATCATCTATACTGGCGGTCACCAGGATTGTCGGGAAAACTGTACACTAACCGGAGGCAAGAATCAACGAGAGGTAAAAGAAATCCCCCCACAGCCTCAATCCCAAGTCAACTGAAGCTAACAGTCTAACACTAGATTATTAATCAATGGCGAGGCAGCTGGCCATGCTCGCTGAAGCTACCTCTAGACCGGTAAAATGAGGCAAGCTTTTTCTTCATCCGGATGGGTCCTGATCTATTCTGCAGGGCTGGTGATTGTGCATGACCACCTGTTGACAATGCAAAGCGGGGGTCACGCGCTCCTTCGATCCTGCCAGAGCTGTATTCCATGGTAATAACTGGTAGGGGGTTCCGGTTGTCAAAAAACCCAGAAGGATTTGAGCTTCTATTCCACCAGCTACCACTACCGCTGTCAAGGGCCAGGGCCCCATGGTAGTCATCGTACTGGTCACACGATGAGTCCCTGTGGCTGTAAGAATCATCGCAAGCCGCCTCCGCATCATTGTAAATAAGCTTCAGTGCCTGCACTACTTCACCCATGAATGGCCTCTGTGACGGATCATTGTGAACACACATGGAAGCGATGGATGCTACTTTAGCTACATCATCAAAGTTGAAATTGCCATTCAGAGAAGGGTCGATCAACCTCTCCAAACCCTCCTTATGGCATAGCAGAGGACGAGCCCAAGTCACAAGGTTCTGAGGACCATTGGTATCAGACATGCATACGGGCTTCCTTCCTGATAAAAGCTCCAGCAAGACAACACCGTAACTGTAGACATCACTCTTCACAAGAAGATGCCCGGTCATGGCATATTCTGGAGCAACGTACCTGTTCGATCAAATAATAAATTAACTTCTATGGGACAGGGAGTAATTAAATGAAATTCAGCAGCAAGTTACATTTTGTCTATCCTAGAAAGGTGTGGTTTGTCAAAAACTCTGCAAGAGACTGGTATTGTTTTGACATTAAAATAGCATGAAGAACCATACTTGGAATTTGGAAATAATCAACAAAATTCTAAGTCTATTTACAACAGCAACAAAAAAGAACGAAATTAGGAAGGAAGATTAGTAATAACCACAAAAGGGGCATGATTTCACCAAATACAAAAGAATGAAGATTGCGTATCACTTTTATCCATTGAAATAACAATTAATGACATCATCATAGCAGATGGATATAAGCAAAATGTGCCTTACCCAAAAGTACCCATTACCCTAGTAGAAATGGGTTGAATTCCATTAGTTGCCTCCCTTGCTAAACCAAAATCAGTAACCTTAGGAGTGAAATCTTCCTCCAACAATATATTGCTGCCCTTGAAGTCACGATGTATAACATGAGGGTTTGAGTCTTCATGTAGATATGCTAAGCCTCTAGCTGCACCCAGAGCAATTTTCATCCTAACATCCCAGTTCAGCATGCCCTTAGCCTTATCAGCACCTTTTAAAAAAAGAGAATCGGTTAGCACAAAGCACTTTGTTGGCATGGCTCAGAGTAACAAATATTTAGAACATACCATGAAGGTGAGATTCAACACTTCCATTGCGTATAAGCTCATAAACAAGACACCTTTTGTTGTGCTCAATGCAAATGCCAATCAATTTGACAAGATTACGGTGATGTAGTCGACTGAGCATTTCAACCTCCGCAATGAACTCTCGATCACCACTCCTGTCTTCTCTTGTGAGCAATTTAACAGCAATCTCGTCTCCACCATCCATGGTCCCATGGTAGACGCGTCCAAACCCACCTTGACCCAACACTCTTTTTGAATCAAAACCATCAGTGGCCTTTTCAAGCTGGGAAAGTGAAAATGTCTTTACTGATGTTGTGCAAGTTGCCACTGTTGAGAGCATTGACGCCGATGCAGAGCTCACCCTGCTAACAGACAAAGTTGATCTGCCACCTACATTACACATAAAAGCTGTTTATTATAGCTGGAGAGTTTACATTGCAACAGTTTAGTGTACTGAAAAGTGAAAATTTTCAAATTTGTTGACCAAAAAGTGAAGCAAAAGCACATAGACATATAAAGGCCGTGAGAAGACTGTCTGAAGCCATTTCTCATATTATTCTAAATAGTGTGTGTAGTCAAACATACTTCTTATTGCAACCTGAGTATAAATATTTTAGTTTATCAATGGAAATGCTCAATCTAGATGTACATGATCATATTTAGCTGGCATGCATGCAAGAAATTCTTTTCTTACAAGAGGAAATGACTCTGAGAAATCATTAAATGGTACTTCCCATGCAGACCTACATGCAACACATGGTCTACGAGCACAGCAATTAATGATAAAAAAATCGGAGTAGAATATTTTGTCATGCAGACCTCTTGCAACACATACAGACTTTCTGTATGGTGCAATTTAGATTTTCATCCATTAAGCGGTAACAGAATCAGTTGCGGTGGACAATACTATACAAACAATTTAGTGTTTAAATTCCCACTCTGCCCAAACACACTGAAAAAGTGCATTATACTTCAATAGGCTTTGAAATAGGGTGCATCATTAAACTGAATTAGCATGGAAAAACTACGAGAAATAGGGATACTTTTGAGAGGGTGTGTGGGCGGGCGGGCGGGCGGGGGGGGGGGGGGGGGAGGAGCAAAGAACAATAGAAGCAATACTAAACAAATAGCATAGTAACTACAGAAGGAATTAGGAACATTGTCATACCATATCTTCTATTAACTGCTGGGGTAGTTGCAGGGCTCACAGCCTCCTGAAGCTGTCTAAGTTTATACCATTTTAATAGTAAAACCCCAAGCCCAATGCATGCTGCTATAAGTGTGATAGAAGACCCTGCAACTACCACAATGATCCATGAATCTAATTTCTTGTTCTTCCCATGGTGCACATCAGCGGTTATTGGATCTTCTCCGGTTCCTGTTGGATCAGATCCATGAGATGTCTCAGGCAGAGATGGTGGCGGAGATCGCAAGCCTGTAGTGACAACGATGAATTAGTGAAACATATAACTTGAGGCGCCCAGACAGACAAAAGGCAGGCTTAAGAAGCAAATATTCATTGTATAGGTTTTACCTGGATAGGTAACATTTATAACTTCATAATCTCCAAAAATAGATGAATTGATCTGAATCTTATTATTCCAGAACCTATCAGATATCAGGGAGGCAGTATAGCCATCAAACTGTTCTCTTAGTGGCACCAAATAAATGGTAACCCTGGTCTTCTGGTCATCCTGGATACTTGGAATTGCAGCCATGATCTTCACCTGGCTTTGTTTAAGAAACGTCCCAGCTGCAACTTCAACTTCTAGTTCTGCTATGCGCATGAATAGCAAATATGGAGCTACATCCAGATCAACAATAACACAAATAGGCAGCACACAACCACAGGGGGAGCCAATCGGTGTTGTAGTCATTGGATCAGAGCAGTTATCAGTACAACCTGCCAAAGATACAAGGAACTATTAGTAAAATAATATGAGAAAGCATGCAACGATGCAAGCATAATTTAGTTCCAAAAATACTCGTTGTGAATAGCAACACTTCATATAAAGAATTATCCACAGAATGGGCTCACAATACCATGTTGAAGAAATGGACCTTAGATCACAATCAAGCAAAGTATATGCAATAGGGCTACAGGTTTGCATAAGACACCTATACTTATTGGAAGATAACAGCACAACGATACATATACAACTAACGAAAAGAATAATATCAAAGTTTTTGGTGTAGCAGTACAAGGATGCATGAGGAAGTTTCCTGAGCCTCAGGAGCACCTAAATTTAAACCTTTCAATAAGAAAATTCAATAGTTTGATATCGCAGATAATGGTGCCATCAACCACACCCAAAAAAAAACCCTAATCTAAATCTGATCTAAACATCAAGAAAAAACAAATTCTGCTGCTCTGAAATAAAAAACAAACTGTTGCTGAGCTTTTTTTCTGCTTTGTACACAAGTCATGTGTGTGGAATGACAGATGACAGCATTAACTATGTTGCCAAAAATAATCATAACTTTTCAAAAGTTTTAAATTGCATTGAAAACACCCAAATTTAGATGCTCCCAGAGAATAAGAAACTTCCTCTAGGATTCATGAAAAGATTAGAGCATAACAAACCTTGTGGAAGGGGAGATGGGGATGGCGAATGAGGATGATATGGTCTTCTGTGGTGCTTGTGTGAAGGAGGGTGCACCGGACCGCCTGTAAAAAATAAGCAGATATTAAACAGCTGATGGGAAATATAAAGTTGGACATTATATGATGGATCCTGTAGCATAGAAGTTCTCAAAGATACATACCAGTGGATTCTGGAGACATTGCCCTTGGAGAAAATGCTGGAGAAATTCGGGGCCCTAAAATTCTTGTATCAGGGGAACCTGATGGATGTGGAGCTGGACTAGGCAGTGCCGTAGCTGGAAAATCAAGGTATTAGGTTTGAAGTTCAGGGGAAAAAAATTGAGGCAATGGGAGAAAATACTCTACCCATCATATGGCTAGCATCATGTTAAGAGTAACAGTATATGTACTTCCAAAATATTACTTAAAGCAGGCTCAGGCCATTGTACTTGGGACCTACATAGGCATTGGTCATTGGCAGTTTATGTTTCTAAAACAAGAGTATATAAAGTGGAAAAGATAAAACATCAGATCATTGGTTTAGATTCTGAAAATGCTGGAGGTTTTGCATATGTTATCATAATGCATGTTACACTTGTTATCTTGCTACGACACAGCACATTAACTGGAGATCAAGCACTAGCTCAGGTGGTGCAGGATTCCCACAAGCGCTCAAACCCTAGGTTCGACGCTGGTGTTTGCCTTTCTACTTGAATTAAATTGGTAGGATGTAGGTACAAATACAAATGTATTTGTAGTAGGACTGTGCATACCAGAGCACCAGAGATATGTTACAGGTGTGTATGCGAGCATGTGCGTGTTGTGGCATGGGTTGGGTGTGTGCAAGTCGTGTGCATCCTACTTTTACCTCTCAAAAGAGATAACAAAAACAAGACATTAACTGAACTGTTTTCACTAAAATGGAAAGAAAACGTGAAATAACCTTTTGATGCTACTACTTTTCAATTGTTGATACAATTAGTGCCCCTGCAAAATATGGAAGTTTACGTGACAGTTCATATGTCTAGAGATGACTAGAAAGTTGGTTGTTAAATCTAACATCCTCGTTCAATATGGTGAGCTGCATTTGGTTTATGGTAAGCAAATGAGCAGAGAAATAGATATCAAATTCATTACATGTTTCAGAAGGTACCAGTGTTAACAATTCACAACCAAAAAAACAATCAAGGGAGGGCATATTGTCGATAATGATGCTAGAGGAGTGGGAGACAGGTTTACACTTTTGTTTTTATTCGAAATGCGCGGGAACGTGGCGTCCTACATTTATGTGTTAAGAAAAGACACAGACGACCGTTACGATTCATGTACAAGTACAACCTAAAAGGTCAGATTTGTACTACTTTAGCGCTATTCCGCATTCCTAATTTAAGATCTCATGCAGAACTCTATTGGCTGGTTTTGTCGCGTAGATGGCACATGTGCTGCAAATACAAATTAAATTCCCATGACGTAGCGTAATGGCGCAAACCGGCATTCCCATAGTCAGGTGGAATCCAAGCATGCTGGCTCACTGTCAGCTTCTAAGACTCCACACCCCCCCCCCACCCCAGATTCTCACGTGGGTAGCCTTGCAGGTGGAATCCCAGACCATACGCACATCTCCAGACGCATAAACCTAACTCACCGACACCATGGCAAGCATCAGAGCCCATTAGTAGATAATCCTCTGGCCAAAACCATCGATCACGCCAAAATCTACCATTTCTCCCCAGAGAACGTGCCGCTAACAGCAGAATTCCGCATCACGGCACAAAAACAGCACCCCTCACACCTCTCGCACACGACCGCGACCGCAGAATTCCGCGGACCCGAGTCCGTGACGGCAACATCGCGGCTTCGCCACAGATCTCCTAACAAAATGCAGCGCAATCCCCTCGCCCGAAAACCCAGCCCGCCTAGAACCTAGAGCAAGCCACCAACCCCGCCTCCCCACCAACGGCAGCAGAAAGCGAGAGGTGTTTCCCCAAAAGTAGTAGCGAGCGAGGAGGGAGATGGTATACCATGGAGCGTGTAGACCGCGCCGAGCATGAGCAGGACGAAGAATCCCCCGCCGCCGCCGCCGCCCATCTCGCCCGGCCCCGTCACGCCGCGCTACACCATTGCAGGAAGCGGCGCGGATCTGGAAGCTTCTGGAAGCGGGCGGATCGGCGCGGGGCTACTCTACTCTACGCTACGCGATGGGAGGAGCGGAGAGGAGAGGAGGAGGGGGGATGTGTGGGGGAATAGCAGCAATAAATTGGAGCGCATCCGCGGCTGCTCGCGTTGGTTGTGGTGGCTGCGCTTCGCTTCGGGCTTGTGATGGGGGATTATTGATGGATGGATGCATTAAATTTGGAGTGGAATTAATGAGCTGCTAATCGCGGGGTTAAGGGGGGGTGGGTTGGATGAGATAGATAGAGAGGAATGATTCGAATCCGGAGAAAGAAGAAAAGCAAAGCAAAGCAACGCAAGAAAAAGTTTACCGGTGGGAGGAGGCGCGAGGGAGGGGAGGAAGGACGGGGAGGTAGCCAGGTAGGGGGCCAGCGCCCACTGGCTGGGGTTCACTGTTCCT
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| CDS seq | ATGGGCGGCGGCGGCGGCGGGGGATTCTTCGTCCTGCTCATGCTCGGCGCGGTCTACACGCTCCATGCTACGGCACTGCCTAGTCCAGCTCCACATCCATCAGGTTCCCCTGATACAAGAATTTTAGGGCCCCGAATTTCTCCAGCATTTTCTCCAAGGGCAATGTCTCCAGAATCCACTGGCGGTCCGGTGCACCCTCCTTCACACAAGCACCACAGAAGACCATATCATCCTCATTCGCCATCCCCATCTCCCCTTCCACAAGGTTGTACTGATAACTGCTCTGATCCAATGACTACAACACCGATTGGCTCCCCCTGTGGTTGTGTGCTGCCTATTTGTGTTATTGTTGATCTGGATGTAGCTCCATATTTGCTATTCATGCGCATAGCAGAACTAGAAGTTGAAGTTGCAGCTGGGACGTTTCTTAAACAAAGCCAGGTGAAGATCATGGCTGCAATTCCAAGTATCCAGGATGACCAGAAGACCAGGGTTACCATTTATTTGGTGCCACTAAGAGAACAGTTTGATGGCTATACTGCCTCCCTGATATCTGATAGGTTCTGGAATAATAAGATTCAGATCAATTCATCTATTTTTGGAGATTATGAAGTTATAAATGTTACCTATCCAGGCTTGCGATCTCCGCCACCATCTCTGCCTGAGACATCTCATGGATCTGATCCAACAGGAACCGGAGAAGATCCAATAACCGCTGATGTGCACCATGGGAAGAACAAGAAATTAGATTCATGGATCATTGTGGTAGTTGCAGGGTCTTCTATCACACTTATAGCAGCATGCATTGGGCTTGGGGTTTTACTATTAAAATGGTATAAACTTAGACAGCTTCAGGAGGCTGTGAGCCCTGCAACTACCCCAGCAGTTAATAGAAGATATGGTGGCAGATCAACTTTGTCTGTTAGCAGGGTGAGCTCTGCATCGGCGTCAATGCTCTCAACAGTGGCAACTTGCACAACATCAGTAAAGACATTTTCACTTTCCCAGCTTGAAAAGGCCACTGATGGTTTTGATTCAAAAAGAGTGTTGGGTCAAGGTGGGTTTGGACGCGTCTACCATGGGACCATGGATGGTGGAGACGAGATTGCTGTTAAATTGCTCACAAGAGAAGACAGGAGTGGTGATCGAGAGTTCATTGCGGAGGTTGAAATGCTCAGTCGACTACATCACCGTAATCTTGTCAAATTGATTGGCATTTGCATTGAGCACAACAAAAGGTGTCTTGTTTATGAGCTTATACGCAATGGAAGTGTTGAATCTCACCTTCATGGTGCTGATAAGGCTAAGGGCATGCTGAACTGGGATGTTAGGATGAAAATTGCTCTGGGTGCAGCTAGAGGCTTAGCATATCTACATGAAGACTCAAACCCTCATGTTATACATCGTGACTTCAAGGGCAGCAATATATTGTTGGAGGAAGATTTCACTCCTAAGGTTACTGATTTTGGTTTAGCAAGGGAGGCAACTAATGGAATTCAACCCATTTCTACTAGGGTAATGGGTACTTTTGGGTACGTTGCTCCAGAATATGCCATGACCGGGCATCTTCTTGTGAAGAGTGATGTCTACAGTTACGGTGTTGTCTTGCTGGAGCTTTTATCAGGAAGGAAGCCCGTATGCATGTCTGATACCAATGGTCCTCAGAACCTTGTGACTTGGGCTCGTCCTCTGCTATGCCATAAGGAGGGTTTGGAGAGGTTGATCGACCCTTCTCTGAATGGCAATTTCAACTTTGATGATGTAGCTAAAGTAGCATCCATCGCTTCCATGTGTGTTCACAATGATCCGTCACAGAGGCCATTCATGGGTGAAGTAGTGCAGGCACTGAAGCTTATTTACAATGATGCGGAGGCGGCTTGCGATGATTCTTACAGCCACAGGGACTCATCGTGTGACCAGTACGATGACTACCATGGGGCCCTGGCCCTTGACAGCGGTAGTGGTAGCTGGTGGAATAGAAGCTCAAATCCTTCTGGGTTTTTTGACAACCGGAACCCCCTACCAGTTATTACCATGGAATACAGCTCTGGCAGGATCGAAGGAGCGCGTGACCCCCGCTTTGCATTGTCAACAGGTGGTCATGCACAATCACCAGCCCTGCAGAATAGATCAGGACCCATCCGGATGAAGAAAAAGCTTGCCTCATTTTACCGGTCTAGAGGTAGCTTCAGCGAGCATGGCCAGCTGCCTCGCCATTGA
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| Protein seq | MGGGGGGGFFVLLMLGAVYTLHATALPSPAPHPSGSPDTRILGPRISPAFSPRAMSPESTGGPVHPPSHKHHRRPYHPHSPSPSPLPQGCTDNCSDPMTTTPIGSPCGCVLPICVIVDLDVAPYLLFMRIAELEVEVAAGTFLKQSQVKIMAAIPSIQDDQKTRVTIYLVPLREQFDGYTASLISDRFWNNKIQINSSIFGDYEVINVTYPGLRSPPPSLPETSHGSDPTGTGEDPITADVHHGKNKKLDSWIIVVVAGSSITLIAACIGLGVLLLKWYKLRQLQEAVSPATTPAVNRRYGGRSTLSVSRVSSASASMLSTVATCTTSVKTFSLSQLEKATDGFDSKRVLGQGGFGRVYHGTMDGGDEIAVKLLTREDRSGDREFIAEVEMLSRLHHRNLVKLIGICIEHNKRCLVYELIRNGSVESHLHGADKAKGMLNWDVRMKIALGAARGLAYLHEDSNPHVIHRDFKGSNILLEEDFTPKVTDFGLAREATNGIQPISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVCMSDTNGPQNLVTWARPLLCHKEGLERLIDPSLNGNFNFDDVAKVASIASMCVHNDPSQRPFMGEVVQALKLIYNDAEAACDDSYSHRDSSCDQYDDYHGALALDSGSGSWWNRSSNPSGFFDNRNPLPVITMEYSSGRIEGARDPRFALSTGGHAQSPALQNRSGPIRMKKKLASFYRSRGSFSEHGQLPRH |
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| Function | Receptor-like serine/threonine-protein kinase ALE2 [UniProtKB/Swiss-Prot:Q8RWW0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0815900 | OsNip_02t0815900-02 | Chr02 | 34945082 | 34952003 | - | RAP2018-11-26 | ||
| CDS seq | ATGTCTCCAGAATCCACTGGCGGTCCGGTGCACCCTCCTTCACACAAGCACCACAGAAGACCATATCATCCTCATTCGCCATCCCCATCTCCCCTTCCACAAGGTTGTACTGATAACTGCTCTGATCCAATGACTACAACACCGATTGGCTCCCCCTGTGGTTGTGTGCTGCCTATTTGTGTTATTGTTGATCTGGATGTAGCTCCATATTTGCTATTCATGCGCATAGCAGAACTAGAAGTTGAAGTTGCAGCTGGGACGTTTCTTAAACAAAGCCAGGTGAAGATCATGGCTGCAATTCCAAGTATCCAGGATGACCAGAAGACCAGGGTTACCATTTATTTGGTGCCACTAAGAGAACAGTTTGATGGCTATACTGCCTCCCTGATATCTGATAGGTTCTGGAATAATAAGATTCAGATCAATTCATCTATTTTTGGAGATTATGAAGTTATAAATGTTACCTATCCAGGCTTGCGATCTCCGCCACCATCTCTGCCTGAGACATCTCATGGATCTGATCCAACAGGAACCGGAGAAGATCCAATAACCGCTGATGTGCACCATGGGAAGAACAAGAAATTAGATTCATGGATCATTGTGGTAGTTGCAGGGTCTTCTATCACACTTATAGCAGCATGCATTGGGCTTGGGGTTTTACTATTAAAATGGTATAAACTTAGACAGCTTCAGGAGGCTGTGAGCCCTGCAACTACCCCAGCAGTTAATAGAAGATATGGTGGCAGATCAACTTTGTCTGTTAGCAGGGTGAGCTCTGCATCGGCGTCAATGCTCTCAACAGTGGCAACTTGCACAACATCAGTAAAGACATTTTCACTTTCCCAGCTTGAAAAGGCCACTGATGGTTTTGATTCAAAAAGAGTGTTGGGTCAAGGTGGGTTTGGACGCGTCTACCATGGGACCATGGATGGTGGAGACGAGATTGCTGTTAAATTGCTCACAAGAGAAGACAGGAGTGGTGATCGAGAGTTCATTGCGGAGGTTGAAATGCTCAGTCGACTACATCACCGTAATCTTGTCAAATTGATTGGCATTTGCATTGAGCACAACAAAAGGTGTCTTGTTTATGAGCTTATACGCAATGGAAGTGTTGAATCTCACCTTCATGGTGCTGATAAGGCTAAGGGCATGCTGAACTGGGATGTTAGGATGAAAATTGCTCTGGGTGCAGCTAGAGGCTTAGCATATCTACATGAAGACTCAAACCCTCATGTTATACATCGTGACTTCAAGGGCAGCAATATATTGTTGGAGGAAGATTTCACTCCTAAGGTTACTGATTTTGGTTTAGCAAGGGAGGCAACTAATGGAATTCAACCCATTTCTACTAGGGTAATGGGTACTTTTGGGTACGTTGCTCCAGAATATGCCATGACCGGGCATCTTCTTGTGAAGAGTGATGTCTACAGTTACGGTGTTGTCTTGCTGGAGCTTTTATCAGGAAGGAAGCCCGTATGCATGTCTGATACCAATGGTCCTCAGAACCTTGTGACTTGGGCTCGTCCTCTGCTATGCCATAAGGAGGGTTTGGAGAGGTTGATCGACCCTTCTCTGAATGGCAATTTCAACTTTGATGATGTAGCTAAAGTAGCATCCATCGCTTCCATGTGTGTTCACAATGATCCGTCACAGAGGCCATTCATGGGTGAAGTAGTGCAGGCACTGAAGCTTATTTACAATGATGCGGAGGCGGCTTGCGATGATTCTTACAGCCACAGGGACTCATCGTGTGACCAGTACGATGACTACCATGGGGCCCTGGCCCTTGACAGCGGTAGTGGTAGCTGGTGGAATAGAAGCTCAAATCCTTCTGGGTTTTTTGACAACCGGAACCCCCTACCAGTTATTACCATGGAATACAGCTCTGGCAGGATCGAAGGAGCGCGTGACCCCCGCTTTGCATTGTCAACAGGTGGTCATGCACAATCACCAGCCCTGCAGAATAGATCAGGACCCATCCGGATGAAGAAAAAGCTTGCCTCATTTTACCGGTCTAGAGGTAGCTTCAGCGAGCATGGCCAGCTGCCTCGCCATTGA
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| Protein seq | MSPESTGGPVHPPSHKHHRRPYHPHSPSPSPLPQGCTDNCSDPMTTTPIGSPCGCVLPICVIVDLDVAPYLLFMRIAELEVEVAAGTFLKQSQVKIMAAIPSIQDDQKTRVTIYLVPLREQFDGYTASLISDRFWNNKIQINSSIFGDYEVINVTYPGLRSPPPSLPETSHGSDPTGTGEDPITADVHHGKNKKLDSWIIVVVAGSSITLIAACIGLGVLLLKWYKLRQLQEAVSPATTPAVNRRYGGRSTLSVSRVSSASASMLSTVATCTTSVKTFSLSQLEKATDGFDSKRVLGQGGFGRVYHGTMDGGDEIAVKLLTREDRSGDREFIAEVEMLSRLHHRNLVKLIGICIEHNKRCLVYELIRNGSVESHLHGADKAKGMLNWDVRMKIALGAARGLAYLHEDSNPHVIHRDFKGSNILLEEDFTPKVTDFGLAREATNGIQPISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVCMSDTNGPQNLVTWARPLLCHKEGLERLIDPSLNGNFNFDDVAKVASIASMCVHNDPSQRPFMGEVVQALKLIYNDAEAACDDSYSHRDSSCDQYDDYHGALALDSGSGSWWNRSSNPSGFFDNRNPLPVITMEYSSGRIEGARDPRFALSTGGHAQSPALQNRSGPIRMKKKLASFYRSRGSFSEHGQLPRH
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0815900 | OsNip_02t0815900-01 | Chr02 | 34945082 | 34952009 | - | RAP2018-11-26 | ||
| CDS seq | ATGGGCGGCGGCGGCGGCGGGGGATTCTTCGTCCTGCTCATGCTCGGCGCGGTCTACACGCTCCATGCTACGGCACTGCCTAGTCCAGCTCCACATCCATCAGGTTCCCCTGATACAAGAATTTTAGGGCCCCGAATTTCTCCAGCATTTTCTCCAAGGGCAATGTCTCCAGAATCCACTGGCGGTCCGGTGCACCCTCCTTCACACAAGCACCACAGAAGACCATATCATCCTCATTCGCCATCCCCATCTCCCCTTCCACAAGGTTGTACTGATAACTGCTCTGATCCAATGACTACAACACCGATTGGCTCCCCCTGTGGTTGTGTGCTGCCTATTTGTGTTATTGTTGATCTGGATGTAGCTCCATATTTGCTATTCATGCGCATAGCAGAACTAGAAGTTGAAGTTGCAGCTGGGACGTTTCTTAAACAAAGCCAGGTGAAGATCATGGCTGCAATTCCAAGTATCCAGGATGACCAGAAGACCAGGGTTACCATTTATTTGGTGCCACTAAGAGAACAGTTTGATGGCTATACTGCCTCCCTGATATCTGATAGGTTCTGGAATAATAAGATTCAGATCAATTCATCTATTTTTGGAGATTATGAAGTTATAAATGTTACCTATCCAGGCTTGCGATCTCCGCCACCATCTCTGCCTGAGACATCTCATGGATCTGATCCAACAGGAACCGGAGAAGATCCAATAACCGCTGATGTGCACCATGGGAAGAACAAGAAATTAGATTCATGGATCATTGTGGTAGTTGCAGGGTCTTCTATCACACTTATAGCAGCATGCATTGGGCTTGGGGTTTTACTATTAAAATGGTATAAACTTAGACAGCTTCAGGAGGCTGTGAGCCCTGCAACTACCCCAGCAGTTAATAGAAGATATGGTGGCAGATCAACTTTGTCTGTTAGCAGGGTGAGCTCTGCATCGGCGTCAATGCTCTCAACAGTGGCAACTTGCACAACATCAGTAAAGACATTTTCACTTTCCCAGCTTGAAAAGGCCACTGATGGTTTTGATTCAAAAAGAGTGTTGGGTCAAGGTGGGTTTGGACGCGTCTACCATGGGACCATGGATGGTGGAGACGAGATTGCTGTTAAATTGCTCACAAGAGAAGACAGGAGTGGTGATCGAGAGTTCATTGCGGAGGTTGAAATGCTCAGTCGACTACATCACCGTAATCTTGTCAAATTGATTGGCATTTGCATTGAGCACAACAAAAGGTGTCTTGTTTATGAGCTTATACGCAATGGAAGTGTTGAATCTCACCTTCATGGTGCTGATAAGGCTAAGGGCATGCTGAACTGGGATGTTAGGATGAAAATTGCTCTGGGTGCAGCTAGAGGCTTAGCATATCTACATGAAGACTCAAACCCTCATGTTATACATCGTGACTTCAAGGGCAGCAATATATTGTTGGAGGAAGATTTCACTCCTAAGGTTACTGATTTTGGTTTAGCAAGGGAGGCAACTAATGGAATTCAACCCATTTCTACTAGGGTAATGGGTACTTTTGGGTACGTTGCTCCAGAATATGCCATGACCGGGCATCTTCTTGTGAAGAGTGATGTCTACAGTTACGGTGTTGTCTTGCTGGAGCTTTTATCAGGAAGGAAGCCCGTATGCATGTCTGATACCAATGGTCCTCAGAACCTTGTGACTTGGGCTCGTCCTCTGCTATGCCATAAGGAGGGTTTGGAGAGGTTGATCGACCCTTCTCTGAATGGCAATTTCAACTTTGATGATGTAGCTAAAGTAGCATCCATCGCTTCCATGTGTGTTCACAATGATCCGTCACAGAGGCCATTCATGGGTGAAGTAGTGCAGGCACTGAAGCTTATTTACAATGATGCGGAGGCGGCTTGCGATGATTCTTACAGCCACAGGGACTCATCGTGTGACCAGTACGATGACTACCATGGGGCCCTGGCCCTTGACAGCGGTAGTGGTAGCTGGTGGAATAGAAGCTCAAATCCTTCTGGGTTTTTTGACAACCGGAACCCCCTACCAGTTATTACCATGGAATACAGCTCTGGCAGGATCGAAGGAGCGCGTGACCCCCGCTTTGCATTGTCAACAGGTGGTCATGCACAATCACCAGCCCTGCAGAATAGATCAGGACCCATCCGGATGAAGAAAAAGCTTGCCTCATTTTACCGGTCTAGAGGTAGCTTCAGCGAGCATGGCCAGCTGCCTCGCCATTGA
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| Protein seq | MGGGGGGGFFVLLMLGAVYTLHATALPSPAPHPSGSPDTRILGPRISPAFSPRAMSPESTGGPVHPPSHKHHRRPYHPHSPSPSPLPQGCTDNCSDPMTTTPIGSPCGCVLPICVIVDLDVAPYLLFMRIAELEVEVAAGTFLKQSQVKIMAAIPSIQDDQKTRVTIYLVPLREQFDGYTASLISDRFWNNKIQINSSIFGDYEVINVTYPGLRSPPPSLPETSHGSDPTGTGEDPITADVHHGKNKKLDSWIIVVVAGSSITLIAACIGLGVLLLKWYKLRQLQEAVSPATTPAVNRRYGGRSTLSVSRVSSASASMLSTVATCTTSVKTFSLSQLEKATDGFDSKRVLGQGGFGRVYHGTMDGGDEIAVKLLTREDRSGDREFIAEVEMLSRLHHRNLVKLIGICIEHNKRCLVYELIRNGSVESHLHGADKAKGMLNWDVRMKIALGAARGLAYLHEDSNPHVIHRDFKGSNILLEEDFTPKVTDFGLAREATNGIQPISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVCMSDTNGPQNLVTWARPLLCHKEGLERLIDPSLNGNFNFDDVAKVASIASMCVHNDPSQRPFMGEVVQALKLIYNDAEAACDDSYSHRDSSCDQYDDYHGALALDSGSGSWWNRSSNPSGFFDNRNPLPVITMEYSSGRIEGARDPRFALSTGGHAQSPALQNRSGPIRMKKKLASFYRSRGSFSEHGQLPRH
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr02 | 34949733 | 34951921 | - | OsNip_02t0815900-01 | OsNip_02t0815900-01,OsNip_02t0815900-02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.760960 | 0.436658 | 4.896794 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g57080 | RBH | 0.789380 | 0.283542 | 1.280634 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0815900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0038510 | RBH | 0.234720 | 2.807762 | 5.141468 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0038540 | RBH | 0.280526 | 1.931084 | 1.158236 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0038390 | RBH | 0.392730 | 7.227804 | 5.407385 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0038010 | RBH | 0.066260 | 0.128361 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0038110 | RBH | 2.495161 | 8.760323 | 8.189801 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0570100 | RBH | 4.8899315 | 6.409578 | 11.87406 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0037780 | RBH | 0.231196 | 0.250778 | 0.498098 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0600900 | RBH | 5.968567 | 4.7647445 | 23.614068 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0038070 | RBH | 0.077015 | 0.284980 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0038010 | RBH | 0.176766 | 4.309381 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0038110 | RBH | 1.776471 | 1.974436 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0038130 | RBH | 0.487133 | 0.790735 | 0.996966 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0037780 | RBH | 0.034996 | 1.302036 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G038440 | RBH | 0.147215 | 0.913154 | 2.408427 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0038310 | RBH | 0.328605 | 4.643211 | 4.948684 |
