Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_02g0712600 | OGI:02083250 | 9/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr02:29515727-29518756 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GACAAATACAGCTACTACTCGCATAAACTACACTCACCGCCGTACACCACTAGATTGTATTTAACGCAGCAAGTTGAAAAATGTTAGAGCAAAAACAACCTCCGCCATTCCATGGCAACGCACATTTTTTTACTCCGTTTTGTTTGGTCATACTCCTGCACGTCGTCCAGTGTTCCACCAGCTCGACGGTCTCGATTGACCAGGCCTCGCCCGCACGCGAGCCGCTGACTCTTCCCGGCTGTTCACTCTGCGGCCACGTCCTTCTCCGCCACGTCATGCTCTTTGCTCACCTGGAAGATTTTGGTCCACCCCGTCGACGACGAGGTCAGCAGCATGCTGCTGCGCGACGTCGGCGTCTCGCTGTCGTCGTCGTCGCCATCGAGCGCGACGGGCATCGCGGGCCACATGAACGCCGGCTTCGACGGCGGCACGTGCGGCGGCGGGGCGGCGCCCGTCAGGATCTGCAGGATGGCCTGCGTCCTCGGCCGCTCCCCGGGGTTCGGGTGGCTGCACGCGAGGCCCAGCAGCAGGAGCCGCTCGGCCTCGACCTCGTCGAACTCGCCGGCGAGCCTCTGGTCGACGGCCTCGAGGATGCCGCCGCCGCCAGCCGCGCCGTGGAGCTTCCAGACCCACTCCAGCAGGCTGAGCCAGCCGGGGAGGTCGCTGCAGGAGACGCGGCGGCCGCAGACGATCTCCAGGACGACGGCGCCGAAGCCGAACACGTCCGACTCCCGCGTCGCGCGGCCGGTGTGGAAGCACTCCGGCGCGATGTACCCCAGCGTCCCCGTGACGCCGGCCATGTCGGTGTACGACGTCTTGTCGGACTCGAGCGCGCGGGCGAGGCCGAAGTCGCCGAGCCGCGCGTTGAAGGCGGAGTCGAGCATGATGTTGGACGGCTTGATGTCGCGGTGGATCACCATCTGGTCGTACTCGTGGTGGAGGTAGTTCAGCGCCGACGCGACGCCGGCGACGACGTTGTAGCGCTGCTTCCAGTCCAGCGCCGCCGCGCCCGGCTCGCCGAAGATGTGCCTGTCCAGGCTGCCGTTCGGCATGTAGTCGTACACTAGCAACAGCCTGCCATTTTGGCGGCACCAACCTGCAGACGTGCATGTCGTCCAAAATGTGTTTAGAACTTGCTTACAGAATTTCGTATCATTTTGAAATTTGAAAAATGAAGACTGAACGTACGGTGTTTGTTTTGGGATATGAATGTCTCCTCTTATGGTGAATTGGCAGCTAATTAAACTATATATATATATAGAGAGAGATGTGCATTTGCATGGCTGTTCCAAGTTCCAACTAACGAACGCTATATTTCTTCTAACACAATGCAAGCAAAAGATCAAATCTTGCATTATCATATTGTCAACCAGAGCACTCCAATATCTATCTTATGATTCAATCTGCTTGCAAAGACGTCATGGACTGATGATTCAATTTTAAATTTAGCTGCCAAGTGGCCCAAGTTGCCACATAGCGTGGTGAGCTTCTTAAAACATCTATTTGCCGTGCCAACTTGTGTGCCATCTCAGAATATTATTTCCTACTCCAAATTATTAGACAAACCGTACCCAATCTAATACTCTAATCACAACTTCAATCTAAACTAAGTATCCTTTTCGGTTAACCAGAACGAGAAATGATCGCTTACCGACGATCTTGACGAGATTGCGATGACGGAGGCAGTTGATAATTCTGAGCTCGGCGAGGAAATCCTCCTTCCCCTTGGTGTTTGCACCGGAGAACTGCTTCACGGCGACGTCCGTGCTCCGGCCATCTTCCCCGACCACGGTGGCGCGGTACACCACGCCGTACCCGCCCTGCCCCAGCTTCATCTTCTCGTCGAAGTTGTTCGTCCCTCTCCTCAGCTCCATGTAGTCGAACTCCTTGGGCAAACCTGGGATCTTCCTGAAATCAATGGCGGCGTTGAACGCCGAGCTCGGGTCGCCGCCGCTCCGTCTCCTCCTCTTCCGGATGTACAGCGCGGCGACCACCCCGAGCACCACGGCGACGCCGCACAACACGCCGACGGCCAACTTCCAGCCGGACGTGCCGGCTAGCTTCGTGGCGGTGGTGGTGGTGCCGTCGTGGAGCCTCTCGACGGTCATGTTCCACATGCGCACGCAGTTGAGCTGGTACGTCGCGGCGCCGGTGGACGCCGAGAAGCCGAAGTACGCCGTCTTGCCGAGGAGGATGGTGGAGAGGTCCAGCGACGCGTTGAGCACGGCGGCGGAGGGCTTGCTCTCGTTCTTGGCGATGTACACCGACATCCGCCGCGACGTGCCATTGTAGTCGACCCAGACAAAGCAGATGCCGTCGTCGACGGTGGTGTTCCTGGGCGCGAGCTGGATACCCAGTGGGGCGAGTGGCGCCGCGGCGGTGGATCGGACGCCGTTGACGTCGAGGCCGACGTGGTTGTCGTCGATGTCGTAGCGCTGCTTCACTGTGTCCAGCTCCACGGCCACGAACCCGTTGGTGGCGTTGCCGTCGGTGGAGGCGTTGGTGAGGCCGAGGAACCCGCCGTGGCTACCGACCGGCGGCCCGCGGGCGTTGCTCGACGCGACGACGAACGCGAGCCCCTCGCCCTTGACCGTCTTGTTCAGGTTCGAGCGGAACAGGTTAACCTTGAACACGGTGGAGAACGAGGCGACGTACTTTCCATCGGCGGCAGCGGCGGCGGAGTTGGACGACGACGACGACGACTTGGATTCCCAGACGACGAACGGGGCGGTGAAGAAGGCGTGGCCGGCCTGGTTGACGAGGAATATCTCGGGCCTGTTGCCGCTGTCCGGGGTGAGCTGCAACCCGTCCTGGGCGATGGTGGCGTTGCCTGAGAAGGTCAGGTTGTCGGGGAGCTGCAACAGGGGCTTGTCGAACTTGGGGAAGGAGAATGTGGTGAACTCCTTGCCGTCGACGTTGCTGGTGAAGGTGGTGGCCTGCGCGGTGGCAGATGGGAGGAGCAAGAAAACGGACACGCACCACACTAGCATGAGCACGGCCATGGCGGCACGGCGGAGACGGCGCAGAAGC
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| CDS seq | ATGGCCGTGCTCATGCTAGTGTGGTGCGTGTCCGTTTTCTTGCTCCTCCCATCTGCCACCGCGCAGGCCACCACCTTCACCAGCAACGTCGACGGCAAGGAGTTCACCACATTCTCCTTCCCCAAGTTCGACAAGCCCCTGTTGCAGCTCCCCGACAACCTGACCTTCTCAGGCAACGCCACCATCGCCCAGGACGGGTTGCAGCTCACCCCGGACAGCGGCAACAGGCCCGAGATATTCCTCGTCAACCAGGCCGGCCACGCCTTCTTCACCGCCCCGTTCGTCGTCTGGGAATCCAAGTCGTCGTCGTCGTCGTCCAACTCCGCCGCCGCTGCCGCCGATGGAAAGTACGTCGCCTCGTTCTCCACCGTGTTCAAGGTTAACCTGTTCCGCTCGAACCTGAACAAGACGGTCAAGGGCGAGGGGCTCGCGTTCGTCGTCGCGTCGAGCAACGCCCGCGGGCCGCCGGTCGGTAGCCACGGCGGGTTCCTCGGCCTCACCAACGCCTCCACCGACGGCAACGCCACCAACGGGTTCGTGGCCGTGGAGCTGGACACAGTGAAGCAGCGCTACGACATCGACGACAACCACGTCGGCCTCGACGTCAACGGCGTCCGATCCACCGCCGCGGCGCCACTCGCCCCACTGGGTATCCAGCTCGCGCCCAGGAACACCACCGTCGACGACGGCATCTGCTTTGTCTGGGTCGACTACAATGGCACGTCGCGGCGGATGTCGGTGTACATCGCCAAGAACGAGAGCAAGCCCTCCGCCGCCGTGCTCAACGCGTCGCTGGACCTCTCCACCATCCTCCTCGGCAAGACGGCGTACTTCGGCTTCTCGGCGTCCACCGGCGCCGCGACGTACCAGCTCAACTGCGTGCGCATGTGGAACATGACCGTCGAGAGGCTCCACGACGGCACCACCACCACCGCCACGAAGCTAGCCGGCACGTCCGGCTGGAAGTTGGCCGTCGGCGTGTTGTGCGGCGTCGCCGTGGTGCTCGGGGTGGTCGCCGCGCTGTACATCCGGAAGAGGAGGAGACGGAGCGGCGGCGACCCGAGCTCGGCGTTCAACGCCGCCATTGATTTCAGGAAGATCCCAGGTTTGCCCAAGGAGTTCGACTACATGGAGCTGAGGAGAGGGACGAACAACTTCGACGAGAAGATGAAGCTGGGGCAGGGCGGGTACGGCGTGGTGTACCGCGCCACCGTGGTCGGGGAAGATGGCCGGAGCACGGACGTCGCCGTGAAGCAGTTCTCCGGTGCAAACACCAAGGGGAAGGAGGATTTCCTCGCCGAGCTCAGAATTATCAACTGCCTCCGTCATCGCAATCTCGTCAAGATCGTCGGTTGGTGCCGCCAAAATGGCAGGCTGTTGCTAGTGTACGACTACATGCCGAACGGCAGCCTGGACAGGCACATCTTCGGCGAGCCGGGCGCGGCGGCGCTGGACTGGAAGCAGCGCTACAACGTCGTCGCCGGCGTCGCGTCGGCGCTGAACTACCTCCACCACGAGTACGACCAGATGGTGATCCACCGCGACATCAAGCCGTCCAACATCATGCTCGACTCCGCCTTCAACGCGCGGCTCGGCGACTTCGGCCTCGCCCGCGCGCTCGAGTCCGACAAGACGTCGTACACCGACATGGCCGGCGTCACGGGGACGCTGGGGTACATCGCGCCGGAGTGCTTCCACACCGGCCGCGCGACGCGGGAGTCGGACGTGTTCGGCTTCGGCGCCGTCGTCCTGGAGATCGTCTGCGGCCGCCGCGTCTCCTGCAGCGACCTCCCCGGCTGGCTCAGCCTGCTGGAGTGGGTCTGGAAGCTCCACGGCGCGGCTGGCGGCGGCGGCATCCTCGAGGCCGTCGACCAGAGGCTCGCCGGCGAGTTCGACGAGGTCGAGGCCGAGCGGCTCCTGCTGCTGGGCCTCGCGTGCAGCCACCCGAACCCCGGGGAGCGGCCGAGGACGCAGGCCATCCTGCAGATCCTGACGGGCGCCGCCCCGCCGCCGCACGTGCCGCCGTCGAAGCCGGCGTTCATGTGGCCCGCGATGCCCGTCGCGCTCGATGGCGACGACGACGACAGCGAGACGCCGACGTCGCGCAGCAGCATGCTGCTGACCTCGTCGTCGACGGGGTGGACCAAAATCTTCCAGGTGAGCAAAGAGCATGACGTGGCGGAGAAGGACGTGGCCGCAGAGTGA
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| Protein seq | MAVLMLVWCVSVFLLLPSATAQATTFTSNVDGKEFTTFSFPKFDKPLLQLPDNLTFSGNATIAQDGLQLTPDSGNRPEIFLVNQAGHAFFTAPFVVWESKSSSSSSNSAAAAADGKYVASFSTVFKVNLFRSNLNKTVKGEGLAFVVASSNARGPPVGSHGGFLGLTNASTDGNATNGFVAVELDTVKQRYDIDDNHVGLDVNGVRSTAAAPLAPLGIQLAPRNTTVDDGICFVWVDYNGTSRRMSVYIAKNESKPSAAVLNASLDLSTILLGKTAYFGFSASTGAATYQLNCVRMWNMTVERLHDGTTTTATKLAGTSGWKLAVGVLCGVAVVLGVVAALYIRKRRRRSGGDPSSAFNAAIDFRKIPGLPKEFDYMELRRGTNNFDEKMKLGQGGYGVVYRATVVGEDGRSTDVAVKQFSGANTKGKEDFLAELRIINCLRHRNLVKIVGWCRQNGRLLLVYDYMPNGSLDRHIFGEPGAAALDWKQRYNVVAGVASALNYLHHEYDQMVIHRDIKPSNIMLDSAFNARLGDFGLARALESDKTSYTDMAGVTGTLGYIAPECFHTGRATRESDVFGFGAVVLEIVCGRRVSCSDLPGWLSLLEWVWKLHGAAGGGGILEAVDQRLAGEFDEVEAERLLLLGLACSHPNPGERPRTQAILQILTGAAPPPHVPPSKPAFMWPAMPVALDGDDDDSETPTSRSSMLLTSSSTGWTKIFQVSKEHDVAEKDVAAE |
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| Function | Probable L-type lectin-domain containing receptor kinase S.5 [UniProtKB/Swiss-Prot:Q9FG33] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0712600 | OsNip_02t0712600-01 | Chr02 | 29515727 | 29518756 | - | RAP2018-11-26 | ||
| CDS seq | ATGGCCGTGCTCATGCTAGTGTGGTGCGTGTCCGTTTTCTTGCTCCTCCCATCTGCCACCGCGCAGGCCACCACCTTCACCAGCAACGTCGACGGCAAGGAGTTCACCACATTCTCCTTCCCCAAGTTCGACAAGCCCCTGTTGCAGCTCCCCGACAACCTGACCTTCTCAGGCAACGCCACCATCGCCCAGGACGGGTTGCAGCTCACCCCGGACAGCGGCAACAGGCCCGAGATATTCCTCGTCAACCAGGCCGGCCACGCCTTCTTCACCGCCCCGTTCGTCGTCTGGGAATCCAAGTCGTCGTCGTCGTCGTCCAACTCCGCCGCCGCTGCCGCCGATGGAAAGTACGTCGCCTCGTTCTCCACCGTGTTCAAGGTTAACCTGTTCCGCTCGAACCTGAACAAGACGGTCAAGGGCGAGGGGCTCGCGTTCGTCGTCGCGTCGAGCAACGCCCGCGGGCCGCCGGTCGGTAGCCACGGCGGGTTCCTCGGCCTCACCAACGCCTCCACCGACGGCAACGCCACCAACGGGTTCGTGGCCGTGGAGCTGGACACAGTGAAGCAGCGCTACGACATCGACGACAACCACGTCGGCCTCGACGTCAACGGCGTCCGATCCACCGCCGCGGCGCCACTCGCCCCACTGGGTATCCAGCTCGCGCCCAGGAACACCACCGTCGACGACGGCATCTGCTTTGTCTGGGTCGACTACAATGGCACGTCGCGGCGGATGTCGGTGTACATCGCCAAGAACGAGAGCAAGCCCTCCGCCGCCGTGCTCAACGCGTCGCTGGACCTCTCCACCATCCTCCTCGGCAAGACGGCGTACTTCGGCTTCTCGGCGTCCACCGGCGCCGCGACGTACCAGCTCAACTGCGTGCGCATGTGGAACATGACCGTCGAGAGGCTCCACGACGGCACCACCACCACCGCCACGAAGCTAGCCGGCACGTCCGGCTGGAAGTTGGCCGTCGGCGTGTTGTGCGGCGTCGCCGTGGTGCTCGGGGTGGTCGCCGCGCTGTACATCCGGAAGAGGAGGAGACGGAGCGGCGGCGACCCGAGCTCGGCGTTCAACGCCGCCATTGATTTCAGGAAGATCCCAGGTTTGCCCAAGGAGTTCGACTACATGGAGCTGAGGAGAGGGACGAACAACTTCGACGAGAAGATGAAGCTGGGGCAGGGCGGGTACGGCGTGGTGTACCGCGCCACCGTGGTCGGGGAAGATGGCCGGAGCACGGACGTCGCCGTGAAGCAGTTCTCCGGTGCAAACACCAAGGGGAAGGAGGATTTCCTCGCCGAGCTCAGAATTATCAACTGCCTCCGTCATCGCAATCTCGTCAAGATCGTCGGTTGGTGCCGCCAAAATGGCAGGCTGTTGCTAGTGTACGACTACATGCCGAACGGCAGCCTGGACAGGCACATCTTCGGCGAGCCGGGCGCGGCGGCGCTGGACTGGAAGCAGCGCTACAACGTCGTCGCCGGCGTCGCGTCGGCGCTGAACTACCTCCACCACGAGTACGACCAGATGGTGATCCACCGCGACATCAAGCCGTCCAACATCATGCTCGACTCCGCCTTCAACGCGCGGCTCGGCGACTTCGGCCTCGCCCGCGCGCTCGAGTCCGACAAGACGTCGTACACCGACATGGCCGGCGTCACGGGGACGCTGGGGTACATCGCGCCGGAGTGCTTCCACACCGGCCGCGCGACGCGGGAGTCGGACGTGTTCGGCTTCGGCGCCGTCGTCCTGGAGATCGTCTGCGGCCGCCGCGTCTCCTGCAGCGACCTCCCCGGCTGGCTCAGCCTGCTGGAGTGGGTCTGGAAGCTCCACGGCGCGGCTGGCGGCGGCGGCATCCTCGAGGCCGTCGACCAGAGGCTCGCCGGCGAGTTCGACGAGGTCGAGGCCGAGCGGCTCCTGCTGCTGGGCCTCGCGTGCAGCCACCCGAACCCCGGGGAGCGGCCGAGGACGCAGGCCATCCTGCAGATCCTGACGGGCGCCGCCCCGCCGCCGCACGTGCCGCCGTCGAAGCCGGCGTTCATGTGGCCCGCGATGCCCGTCGCGCTCGATGGCGACGACGACGACAGCGAGACGCCGACGTCGCGCAGCAGCATGCTGCTGACCTCGTCGTCGACGGGGTGGACCAAAATCTTCCAGGTGAGCAAAGAGCATGACGTGGCGGAGAAGGACGTGGCCGCAGAGTGA
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| Protein seq | MAVLMLVWCVSVFLLLPSATAQATTFTSNVDGKEFTTFSFPKFDKPLLQLPDNLTFSGNATIAQDGLQLTPDSGNRPEIFLVNQAGHAFFTAPFVVWESKSSSSSSNSAAAAADGKYVASFSTVFKVNLFRSNLNKTVKGEGLAFVVASSNARGPPVGSHGGFLGLTNASTDGNATNGFVAVELDTVKQRYDIDDNHVGLDVNGVRSTAAAPLAPLGIQLAPRNTTVDDGICFVWVDYNGTSRRMSVYIAKNESKPSAAVLNASLDLSTILLGKTAYFGFSASTGAATYQLNCVRMWNMTVERLHDGTTTTATKLAGTSGWKLAVGVLCGVAVVLGVVAALYIRKRRRRSGGDPSSAFNAAIDFRKIPGLPKEFDYMELRRGTNNFDEKMKLGQGGYGVVYRATVVGEDGRSTDVAVKQFSGANTKGKEDFLAELRIINCLRHRNLVKIVGWCRQNGRLLLVYDYMPNGSLDRHIFGEPGAAALDWKQRYNVVAGVASALNYLHHEYDQMVIHRDIKPSNIMLDSAFNARLGDFGLARALESDKTSYTDMAGVTGTLGYIAPECFHTGRATRESDVFGFGAVVLEIVCGRRVSCSDLPGWLSLLEWVWKLHGAAGGGGILEAVDQRLAGEFDEVEAERLLLLGLACSHPNPGERPRTQAILQILTGAAPPPHVPPSKPAFMWPAMPVALDGDDDDSETPTSRSSMLLTSSSTGWTKIFQVSKEHDVAEKDVAAE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0328400 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g48200 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0712600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0031070 | RBH | 0.0 | 29.248430 | 0.952189 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0031170 | RBH | 0.0 | 7.979993 | 0.972729 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0031050 | SBH | 0.0 | 13.063605 | 0.720612 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0030630 | RBH | 0.027074 | 0.694653 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0030800 | RBH | 0.000000 | 14.523242 | 1.068768 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0480400 | RBH | 0.0571205 | 3.5753595 | 0.4565405 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0030550 | SBH | 0.023388 | 1.908800 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0509000 | RBH | 0.240899 | 14.09135 | 0.007698 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0030840 | RBH | 0.0 | 0.244920 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0030620 | SBH | 0.0 | 6.182324 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0030980 | SBH | 0.0 | 13.712747 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0030830 | SBH | 0.043555 | 4.975313 | 0.689823 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0030420 | SBH | 0.0 | 13.653728 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G031090 | RBH | 0.0 | 1.919700 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0030860 | SBH | 0.0 | 49.859478 | 0.779717 |
