Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_02g0700300 | OGI:02081280 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr02:28808920-28811960 | ||||||||
| Gene Symbol | DLN66, OsDLN66 | ||||||||||
| DNA seq | ATGCTTTCTCTCTCCTCCTCTTCTTTTGGCTCCGCCTCGCGCGCCACTCTCCCGCCCAGGCGCCTCTCTCTCTCTCTCTAGTTTCTCGCACCACCTGCCTACATATCGCCACAGCCGCTGTCGTCGTCTCGTCTCTGTGTGTGTGTCTCCATCAGACGCCGGCCATATAGCTAGCGAGACCGGCACATTCCCATCGGGAATCCGCCTCGGGCTTCGCCGCAATCCCACGCTAACTCACGCCGCACCAGATTCACGCTCCCAGCTACAAACTCCCAGCCGCGCGCCGGCCGCACGCGCGTGCGCACAGCTAGCGATCGATCGTGATCGTGACCGCGGCCGGGTTGACTGCCGCTCGACGAGCGCACACATCGATCAGCCGGCCGGACGAGGAGATTGTCAGATCGTCTCGGCTCGTCGACGGATTGGCCATCATGTTCGAGGGGATGGAGAGGGCGGGCTACGGCGTCGGCGTCGGCGGCGCGGGGGCGGTGGGAGCCGGGGTGGTGCTGTCGCGGGACCCCAAGCCGCGGCTGCGGTGGACGCCCGACCTGCACGAGCGCTTCGTCGAGGCCGTCACCAAGCTCGGCGGGCCTGACAGTAAGTACCAACTCCATGACTCCATCTCCGAACACCTTGCACCATGTCAGTATATGTCACCATGCCCATGCTTCGATCTTTCTCTGTGCTACATGCGTCCAAACTCCAAACACAATCGAGCTGCTGGAGCTGTAGGCCAGCAGAATTTATTAGCTGTGATGAATGGAACAGTGAAGGAAATTAAATCCTGTTCTTGTTTGCTTGCTTGTTTAATTGGAGCCTTTAATTGTCTAACAGCGAAAAAGAAGCATGTCCATGAACCATCATGAGAGATGCCACAGTGATCCGTATATATGATCATGCTGATCATCACTCATCATCCTCATCTCATACCATTTTGGGGCCATGCATAGTTACATCTGCATAGTCCTGTACTGCTTTGTGACAGCAACTTTATGCTTTGGGGTTATAATTTCGTTTTCCATTTGACTGTGTTTGGACAGAGGCAACCCCCAAGTCGGTGTTGAGACTGATGGGCATGAAAGGTCTCACCTTGTACCACCTCAAGAGCCATCTTCAGGTCTGATCATCTTTTTTTTACTGGTTTTTCTTTTGCTTTATTTGCTTCTTTTGATCTACCACCTACGATGCTAATATGTGCTTCTTGGCGACATCTTTTTATTGATCCACAGAAATATAGGCTTGGAAAGCAGAACAAGAAAGATACAGGCCTAGAAGCCAGCAGAGGAGGTACATGCTTTTGTAAATACTAAATACTTCTCACTAAGTACTAGTAACAAAGATGTTTTTAAAAATGATAAACCCATCACGCATGATTCATTTCTGTTTCTTCTAAACCTTACATTTTTCATGCTCTTTGACAGCATTTGCTGCACATGGCATCAGTTTTGCCTCTGCTGCACCTCCTACCATCCCATCGGCTGAAAATAACAATGCAGGGTAAGTTAGCAGTCATCACCATGCTTAATTCCAGCTTATGCCAAGTTGATTGCAGTAAGGGCAATCTAATTTTGACTCTGTCGCGTCGAAAGCAACGCCTTCAAGATCATGAAGAGGTGTATCCGTGCAGGACTAACAGCATCTTTTTAGTTGGCAGGGGGGGTACGAGATAGGCTTTGTATATAGAGCGATTGGTCGTACTATTTGCGATTTGTAAATACGGTACAAGTCATCTACTCTTACAGAAGTAAATGCGGTGCTTAATTTATAGAGGAAAACGGTATAGGCTGCTAATGATTTGGAAGATTAGGTTGTGTGAAAGGGACACTGTGTGCTAACCGTCTGCAGATCAGGTCAGGTGTTAACTGGTCTGTTGCGAAAATGGAATTTTGTAGTCATGTTACATGGTACTAGTTCCACAAAATAACATAAAAAAACAGCTAATAAGCAGCACAAATTGAGTATTCAGGAATCGGTCTGTCTCTATACTCTGTCGAAGCATTATTATACAGTATACTATAAAAAATTTGCCGACAGAATTGCATTAATTCACTTGAAACAAAAAGAAAACAATTGATCGCAATCTTGCATCTAATGCAATCACTTTCTGAAGTACTAATCCATTTTAGAAAAAACAATAAGTATTGTTTGTTTTATGCTTTGGATGAGACGAGCAATTATTCAGTTTGGTTTTCAATGTCGCATTCGGATTGGCTTATAATTTCTTGAACAATTTTGTCATGATTCAGAGAAACGCCACTGGCCGATGCGCTGCGGTATCAAATTGAAGTCCAACGGAAACTGCACGAACAGCTTGAGGTTAGATTGCCAATGCATCACCCATTAGCTTCCCTGCTTGAATCGTAGTGTAGCTCAGAACACAAAAACTAACAGGTCAATGTGTTGCTCCACGTACAGGTTCAGAAGAAGCTTCAAATGCGAATTGAGGCCCAAGGGAAATACCTGCAGACGATACTGGAGAAAGCCCAGAACAACCTCTCCTATGATGCAACTGGAACTGCAAACCTCGAAGCAACCAGAACGCAGCTTACAGATTTCAACCTGGCTCTTTCAGGATTCATGAACAATGTTTCACAAGTGTGTGAACAGAACAATGGAGAGCTAGCGAAAGCGATATCTGAAGACAATCTCAGAACTACCAATCTAGGCTTTCAGCTCTACCATGGAATTCAGGATTCCGACGATGTCAAGTGTTCTCAAGATGAGGGCTTACTGCTGCTAGATTTGAATATCAAAGGAGGAGGATATGACCATCTGTCCTCCAATGCCATGCGAGGCGGCGAATCCGGTCTGAAGATTAGTCAGCACAGGAGGTAAAGATTCAGTAGAATGGCGACCATCTGTAGTTTAAATTAAGAGTTACCTTTGTCCTATGAGAAATTCTTTTGTGGCGATATTGAGGGTGCTTAAGTACAGTGTTGGTCCAGAGTGTACTAATGTAAAATTTGTGGGGTAAAGGCTCTGAATAATCGTAGCTAATCAATCATGTCTAGATCTGAATATCAGAATATATACACTGTATG
More
|
||||||||||
| CDS seq | ATGTTCGAGGGGATGGAGAGGGCGGGCTACGGCGTCGGCGTCGGCGGCGCGGGGGCGGTGGGAGCCGGGGTGGTGCTGTCGCGGGACCCCAAGCCGCGGCTGCGGTGGACGCCCGACCTGCACGAGCGCTTCGTCGAGGCCGTCACCAAGCTCGGCGGGCCTGACAAGGCAACCCCCAAGTCGGTGTTGAGACTGATGGGCATGAAAGGTCTCACCTTGTACCACCTCAAGAGCCATCTTCAGAAATATAGGCTTGGAAAGCAGAACAAGAAAGATACAGGCCTAGAAGCCAGCAGAGGAGCATTTGCTGCACATGGCATCAGTTTTGCCTCTGCTGCACCTCCTACCATCCCATCGGCTGAAAATAACAATGCAGGAGAAACGCCACTGGCCGATGCGCTGCGGTATCAAATTGAAGTCCAACGGAAACTGCACGAACAGCTTGAGGTTCAGAAGAAGCTTCAAATGCGAATTGAGGCCCAAGGGAAATACCTGCAGACGATACTGGAGAAAGCCCAGAACAACCTCTCCTATGATGCAACTGGAACTGCAAACCTCGAAGCAACCAGAACGCAGCTTACAGATTTCAACCTGGCTCTTTCAGGATTCATGAACAATGTTTCACAAGTGTGTGAACAGAACAATGGAGAGCTAGCGAAAGCGATATCTGAAGACAATCTCAGAACTACCAATCTAGGCTTTCAGCTCTACCATGGAATTCAGGATTCCGACGATGTCAAGTGTTCTCAAGATGAGGGCTTACTGCTGCTAGATTTGAATATCAAAGGAGGAGGATATGACCATCTGTCCTCCAATGCCATGCGAGGCGGCGAATCCGGTCTGAAGATTAGTCAGCACAGGAGGTAA
More
|
||||||||||
| Protein seq | MFEGMERAGYGVGVGGAGAVGAGVVLSRDPKPRLRWTPDLHERFVEAVTKLGGPDKATPKSVLRLMGMKGLTLYHLKSHLQKYRLGKQNKKDTGLEASRGAFAAHGISFASAAPPTIPSAENNNAGETPLADALRYQIEVQRKLHEQLEVQKKLQMRIEAQGKYLQTILEKAQNNLSYDATGTANLEATRTQLTDFNLALSGFMNNVSQVCEQNNGELAKAISEDNLRTTNLGFQLYHGIQDSDDVKCSQDEGLLLLDLNIKGGGYDHLSSNAMRGGESGLKISQHRR |
||||||||||
| Function | Myb family transcription factor PHL11 [UniProtKB/Swiss-Prot:C0SVS4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0700300 | OsNip_02t0700300-01 | Chr02 | 28808920 | 28811960 | + | RAP2018-11-26 | ||
| CDS seq | ATGTTCGAGGGGATGGAGAGGGCGGGCTACGGCGTCGGCGTCGGCGGCGCGGGGGCGGTGGGAGCCGGGGTGGTGCTGTCGCGGGACCCCAAGCCGCGGCTGCGGTGGACGCCCGACCTGCACGAGCGCTTCGTCGAGGCCGTCACCAAGCTCGGCGGGCCTGACAAGGCAACCCCCAAGTCGGTGTTGAGACTGATGGGCATGAAAGGTCTCACCTTGTACCACCTCAAGAGCCATCTTCAGAAATATAGGCTTGGAAAGCAGAACAAGAAAGATACAGGCCTAGAAGCCAGCAGAGGAGCATTTGCTGCACATGGCATCAGTTTTGCCTCTGCTGCACCTCCTACCATCCCATCGGCTGAAAATAACAATGCAGGAGAAACGCCACTGGCCGATGCGCTGCGGTATCAAATTGAAGTCCAACGGAAACTGCACGAACAGCTTGAGGTTCAGAAGAAGCTTCAAATGCGAATTGAGGCCCAAGGGAAATACCTGCAGACGATACTGGAGAAAGCCCAGAACAACCTCTCCTATGATGCAACTGGAACTGCAAACCTCGAAGCAACCAGAACGCAGCTTACAGATTTCAACCTGGCTCTTTCAGGATTCATGAACAATGTTTCACAAGTGTGTGAACAGAACAATGGAGAGCTAGCGAAAGCGATATCTGAAGACAATCTCAGAACTACCAATCTAGGCTTTCAGCTCTACCATGGAATTCAGGATTCCGACGATGTCAAGTGTTCTCAAGATGAGGGCTTACTGCTGCTAGATTTGAATATCAAAGGAGGAGGATATGACCATCTGTCCTCCAATGCCATGCGAGGCGGCGAATCCGGTCTGAAGATTAGTCAGCACAGGAGGTAA
More
|
|||||||
| Protein seq | MFEGMERAGYGVGVGGAGAVGAGVVLSRDPKPRLRWTPDLHERFVEAVTKLGGPDKATPKSVLRLMGMKGLTLYHLKSHLQKYRLGKQNKKDTGLEASRGAFAAHGISFASAAPPTIPSAENNNAGETPLADALRYQIEVQRKLHEQLEVQKKLQMRIEAQGKYLQTILEKAQNNLSYDATGTANLEATRTQLTDFNLALSGFMNNVSQVCEQNNGELAKAISEDNLRTTNLGFQLYHGIQDSDDVKCSQDEGLLLLDLNIKGGGYDHLSSNAMRGGESGLKISQHRR
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.483763 | 0.140985 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0600000 | RBH | 0.000000 | 0.151193 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g47190 | RBH | 0.323702 | 0.102307 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0700300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0030210 | RBH | 0.000000 | 3.452804 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0030300 | RBH | 0.171866 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0030160 | RBH | 0.000000 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0029750 | RBH | 0.046917 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0029970 | RBH | 1.362138 | 6.812284 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0468900 | RBH | 2.348841 | 5.163827 | 1.6753405 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0029740 | RBH | 0.062463 | 0.258873 | 0.079564 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0495900 | RBH | 3.6855625 | 1.4279025 | 0.429203 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0030060 | RBH | 0.245424 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0029790 | RBH | 0.239364 | 10.899075 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0030120 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0029970 | RBH | 0.118996 | 0.154117 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0029640 | RBH | 0.077726 | 1.825765 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G030210 | RBH | 0.492428 | 4.589011 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0029990 | RBH | 0.312869 | 4.756711 | 0.997723 |
