Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_02g0578300 | OGI:02063370 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr02:22229575-22231423 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATTCAACATTGAGGTGAATAAACAACCCAAAATCTTGGAACCAGTCAACGATCAGCCCGAATTTCGCCGTTGTTGCTTGCCTACCTCTCCACTCCATCATTCGCAAATTTTTTGCAGAACACAGCAAGGAGTAGCAGAGAATGAGCGAGATGCAGCCGCACGCCGTGTGCTTGCCGTTCCCGGCGCAGGGGCACATCACGCCGATGATGAAGCTGGCCAAGATCCTCCACTCCAGGGGCTTCCACGTCACCTTCGTCAGCACCGAGTACAACCACCGCCGCCTCGTCCGCTCCCGCGGCGCCGCCGCCGCGGCCGGAATCCCGGGGTTCCGCTTCGCCACCATCCCGGACGGCCTGCCGCCGTCCGACGCCGACGCCACGCAGGACCCGCCGTCGCTCAGCTACTCCACCATGACCACCTGCCTCCCCCACTTCAGGAAGCTGCTCGCCGACCTCAACAACCGCTTGGCGCCTGACGACGACGACGCCGCGCCGCCGGTCACCTGCGTCGTGGCCGACCACCTCATGGGCTTCAGCCTCGACGCCGCGGCGGAGCTCGGCGTGCCGTGCGCGCTCTTCTGGACGGCCAGCGCCTGCGGCTACATGGGCTACCGCAACTTCCGCCTGCTCATCGACATGGGCATCATTCCCCTCAAAGGTCTGATCATTTCTTGAATTTTTCAATATACGAATCGTGTCGTCGATTCGTCTTCATCAGATTGCTCTGCTTGGCGATCGAGCAGGGGAAGAGCAGCTGACGAACGGGTTCATGGACATGGCGGTGGACTGGGCGCCGGGGATGAGCAAGCACATGCGGCTCAAGGACTTCCCCACCTTCCTCCGCACCACGGACCGCAACGACATCCTGATGACGTTCCAGCTGCGGCAGGTGGAGCGCGCGGAGGAGGCGGACGCCGTGGTCCTCAACACGTTCGACGAGCTGGAGCGGCCGGCGCTGGACGCCATGCGCGCCATCACCCCGGCCATCTACACCGTCGGCCCGCTCGCGTTCCTCACGGAGCAGATCCCGCCGGGCGGGCCCCTCGACGACATCAGCCCCAGCCTCTGGAGGGAAGACGACGCCTGCCTCCGGTGGCTCGACGGGAGGAATCCCCGGTCGGTGGTGTACGTGAACTACGGGAGCGTGACGGTGATGAGCGGCCACGAGCTGGAGGAGTTCGCGTGGGGGCTCGCCGGCAGTGGCCACGACTTCCTCTGGATCGTCAGGCCGGACGTCGTGACGAGGACCGCCGCCGCCACCGCCGCGGAGGCGGCGCTGCCGCGGGAGTTCACGGAGGCGACGAAGGGGAGGGGGCTCGTGGCGAGCTGGTGCGACCAGGAGGCGGTGCTGCGGCACCCGGCGGTGGGGTTGTTCCTGACGCACAGCGGGTGGAACTCGACGGTGGAGGCGCTGTCCGGCGGCGTGCCGATGCTGTGCTGGCCGTTCTTCGCCGAGCAGCAGACCAACTGCCGGTACAAGTGCGTGGAGTGGGGCGTGGCGATGGAGGTGGGGGACAGCGTGCGGCGGGAGGCGGTGGAGGGGAGGATCAGGGAGGCCATGGGAGGAGGGGAGAAGGGGAAGGAGATGAGGAGGAGGGCGGCGGAGTGGAAGGAGGCCGCCGCTCGAGCGAGGGGACGGTCGCTCGCCAACCTTGAGAGGCTCATCGGCGATGTACTGCTCTCTGGTAAAAAGGACAGGGTAATTTGATCATCAAATTCAGTAGAGCGTGTACTTGATTGGTGCAAGTAAAAGTATTATGCGGATGCTAGTGTGCAACTGCAGCATCAGATCCATGTACCACAAATGCGTTGGTGATCCATGGCAGCTGTGCAAATGTGACTTCTCGCCT
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| CDS seq | ATGAGCGAGATGCAGCCGCACGCCGTGTGCTTGCCGTTCCCGGCGCAGGGGCACATCACGCCGATGATGAAGCTGGCCAAGATCCTCCACTCCAGGGGCTTCCACGTCACCTTCGTCAGCACCGAGTACAACCACCGCCGCCTCGTCCGCTCCCGCGGCGCCGCCGCCGCGGCCGGAATCCCGGGGTTCCGCTTCGCCACCATCCCGGACGGCCTGCCGCCGTCCGACGCCGACGCCACGCAGGACCCGCCGTCGCTCAGCTACTCCACCATGACCACCTGCCTCCCCCACTTCAGGAAGCTGCTCGCCGACCTCAACAACCGCTTGGCGCCTGACGACGACGACGCCGCGCCGCCGGTCACCTGCGTCGTGGCCGACCACCTCATGGGCTTCAGCCTCGACGCCGCGGCGGAGCTCGGCGTGCCGTGCGCGCTCTTCTGGACGGCCAGCGCCTGCGGCTACATGGGCTACCGCAACTTCCGCCTGCTCATCGACATGGGCATCATTCCCCTCAAAGGGGAAGAGCAGCTGACGAACGGGTTCATGGACATGGCGGTGGACTGGGCGCCGGGGATGAGCAAGCACATGCGGCTCAAGGACTTCCCCACCTTCCTCCGCACCACGGACCGCAACGACATCCTGATGACGTTCCAGCTGCGGCAGGTGGAGCGCGCGGAGGAGGCGGACGCCGTGGTCCTCAACACGTTCGACGAGCTGGAGCGGCCGGCGCTGGACGCCATGCGCGCCATCACCCCGGCCATCTACACCGTCGGCCCGCTCGCGTTCCTCACGGAGCAGATCCCGCCGGGCGGGCCCCTCGACGACATCAGCCCCAGCCTCTGGAGGGAAGACGACGCCTGCCTCCGGTGGCTCGACGGGAGGAATCCCCGGTCGGTGGTGTACGTGAACTACGGGAGCGTGACGGTGATGAGCGGCCACGAGCTGGAGGAGTTCGCGTGGGGGCTCGCCGGCAGTGGCCACGACTTCCTCTGGATCGTCAGGCCGGACGTCGTGACGAGGACCGCCGCCGCCACCGCCGCGGAGGCGGCGCTGCCGCGGGAGTTCACGGAGGCGACGAAGGGGAGGGGGCTCGTGGCGAGCTGGTGCGACCAGGAGGCGGTGCTGCGGCACCCGGCGGTGGGGTTGTTCCTGACGCACAGCGGGTGGAACTCGACGGTGGAGGCGCTGTCCGGCGGCGTGCCGATGCTGTGCTGGCCGTTCTTCGCCGAGCAGCAGACCAACTGCCGGTACAAGTGCGTGGAGTGGGGCGTGGCGATGGAGGTGGGGGACAGCGTGCGGCGGGAGGCGGTGGAGGGGAGGATCAGGGAGGCCATGGGAGGAGGGGAGAAGGGGAAGGAGATGAGGAGGAGGGCGGCGGAGTGGAAGGAGGCCGCCGCTCGAGCGAGGGGACGGTCGCTCGCCAACCTTGAGAGGCTCATCGGCGATGTACTGCTCTCTGGTAAAAAGGACAGGGTAATTTGA
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| Protein seq | MSEMQPHAVCLPFPAQGHITPMMKLAKILHSRGFHVTFVSTEYNHRRLVRSRGAAAAAGIPGFRFATIPDGLPPSDADATQDPPSLSYSTMTTCLPHFRKLLADLNNRLAPDDDDAAPPVTCVVADHLMGFSLDAAAELGVPCALFWTASACGYMGYRNFRLLIDMGIIPLKGEEQLTNGFMDMAVDWAPGMSKHMRLKDFPTFLRTTDRNDILMTFQLRQVERAEEADAVVLNTFDELERPALDAMRAITPAIYTVGPLAFLTEQIPPGGPLDDISPSLWREDDACLRWLDGRNPRSVVYVNYGSVTVMSGHELEEFAWGLAGSGHDFLWIVRPDVVTRTAAATAAEAALPREFTEATKGRGLVASWCDQEAVLRHPAVGLFLTHSGWNSTVEALSGGVPMLCWPFFAEQQTNCRYKCVEWGVAMEVGDSVRREAVEGRIREAMGGGEKGKEMRRRAAEWKEAAARARGRSLANLERLIGDVLLSGKKDRVI |
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| Function | 7-deoxyloganetin glucosyltransferase [UniProtKB/Swiss-Prot:F8WKW1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0578300 | OsNip_02t0578300-01 | Chr02 | 22229575 | 22231423 | + | RAP2018-11-26 | ||
| CDS seq | ATGAGCGAGATGCAGCCGCACGCCGTGTGCTTGCCGTTCCCGGCGCAGGGGCACATCACGCCGATGATGAAGCTGGCCAAGATCCTCCACTCCAGGGGCTTCCACGTCACCTTCGTCAGCACCGAGTACAACCACCGCCGCCTCGTCCGCTCCCGCGGCGCCGCCGCCGCGGCCGGAATCCCGGGGTTCCGCTTCGCCACCATCCCGGACGGCCTGCCGCCGTCCGACGCCGACGCCACGCAGGACCCGCCGTCGCTCAGCTACTCCACCATGACCACCTGCCTCCCCCACTTCAGGAAGCTGCTCGCCGACCTCAACAACCGCTTGGCGCCTGACGACGACGACGCCGCGCCGCCGGTCACCTGCGTCGTGGCCGACCACCTCATGGGCTTCAGCCTCGACGCCGCGGCGGAGCTCGGCGTGCCGTGCGCGCTCTTCTGGACGGCCAGCGCCTGCGGCTACATGGGCTACCGCAACTTCCGCCTGCTCATCGACATGGGCATCATTCCCCTCAAAGGGGAAGAGCAGCTGACGAACGGGTTCATGGACATGGCGGTGGACTGGGCGCCGGGGATGAGCAAGCACATGCGGCTCAAGGACTTCCCCACCTTCCTCCGCACCACGGACCGCAACGACATCCTGATGACGTTCCAGCTGCGGCAGGTGGAGCGCGCGGAGGAGGCGGACGCCGTGGTCCTCAACACGTTCGACGAGCTGGAGCGGCCGGCGCTGGACGCCATGCGCGCCATCACCCCGGCCATCTACACCGTCGGCCCGCTCGCGTTCCTCACGGAGCAGATCCCGCCGGGCGGGCCCCTCGACGACATCAGCCCCAGCCTCTGGAGGGAAGACGACGCCTGCCTCCGGTGGCTCGACGGGAGGAATCCCCGGTCGGTGGTGTACGTGAACTACGGGAGCGTGACGGTGATGAGCGGCCACGAGCTGGAGGAGTTCGCGTGGGGGCTCGCCGGCAGTGGCCACGACTTCCTCTGGATCGTCAGGCCGGACGTCGTGACGAGGACCGCCGCCGCCACCGCCGCGGAGGCGGCGCTGCCGCGGGAGTTCACGGAGGCGACGAAGGGGAGGGGGCTCGTGGCGAGCTGGTGCGACCAGGAGGCGGTGCTGCGGCACCCGGCGGTGGGGTTGTTCCTGACGCACAGCGGGTGGAACTCGACGGTGGAGGCGCTGTCCGGCGGCGTGCCGATGCTGTGCTGGCCGTTCTTCGCCGAGCAGCAGACCAACTGCCGGTACAAGTGCGTGGAGTGGGGCGTGGCGATGGAGGTGGGGGACAGCGTGCGGCGGGAGGCGGTGGAGGGGAGGATCAGGGAGGCCATGGGAGGAGGGGAGAAGGGGAAGGAGATGAGGAGGAGGGCGGCGGAGTGGAAGGAGGCCGCCGCTCGAGCGAGGGGACGGTCGCTCGCCAACCTTGAGAGGCTCATCGGCGATGTACTGCTCTCTGGTAAAAAGGACAGGGTAATTTGA
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| Protein seq | MSEMQPHAVCLPFPAQGHITPMMKLAKILHSRGFHVTFVSTEYNHRRLVRSRGAAAAAGIPGFRFATIPDGLPPSDADATQDPPSLSYSTMTTCLPHFRKLLADLNNRLAPDDDDAAPPVTCVVADHLMGFSLDAAAELGVPCALFWTASACGYMGYRNFRLLIDMGIIPLKGEEQLTNGFMDMAVDWAPGMSKHMRLKDFPTFLRTTDRNDILMTFQLRQVERAEEADAVVLNTFDELERPALDAMRAITPAIYTVGPLAFLTEQIPPGGPLDDISPSLWREDDACLRWLDGRNPRSVVYVNYGSVTVMSGHELEEFAWGLAGSGHDFLWIVRPDVVTRTAAATAAEAALPREFTEATKGRGLVASWCDQEAVLRHPAVGLFLTHSGWNSTVEALSGGVPMLCWPFFAEQQTNCRYKCVEWGVAMEVGDSVRREAVEGRIREAMGGGEKGKEMRRRAAEWKEAAARARGRSLANLERLIGDVLLSGKKDRVI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0451200 | RBH | 3.693025 | 2.133952 | 0.939612 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g36840 | RBH | 0.282289 | 0.054554 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0578300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0022340 | RBH | 0.0 | 2.930654 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0022440 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0022430 | RBH | 0.0 | 0.0 | 0.764547 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0022130 | RBH | 0.0 | 0.096517 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0022070 | RBH | 0.0 | 3.987411 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0364100 | RBH | 0.1216545 | 6.460163 | 0.7105795 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0021820 | RBH | 0.0 | 0.092608 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0392400 | RBH | 0.141375 | 8.3456765 | 0.5694945 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0022270 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0022000 | RBH | 0.0 | 3.459619 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0022460 | RBH | 0.0 | 3.631465 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0022140 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0021960 | RBH | 0.0 | 0.800617 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G022410 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0022220 | RBH | 0.0 | 2.281041 | 0.000000 |
