Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_02g0565500 | OGI:02061520 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr02:21474733-21477665 | ||||||||
| Gene Symbol | RLCK74, OsRLCK74 | ||||||||||
| DNA seq | GCATCTTAGGTGTACATCTATGCAATGTGCACCATTTAATCTCCATCCTGGCCAAAACCTGAATTCAGGAACAGGATTTTAGCCCCAGCTTTGTAGTTCCAACAGAAAAAAAGAAGAAGAAAAACTACTATTAATTCCAAAGTTCTATACAAATATAAGAAAAAGAGGCAGCCATGGAAGTTCTTGGGAATGCATCATGCAATCCTTGGTTCTATGCAAGCTTTTGAAGGACCTTAAAATTACACCATGACACGACAAAGAATAACTTAATTCATTACACCAGTTAGCAAAATACCCCCTCTATATGTAATATACCCTGTGGTACCAATGGATCAGTGTTTTACAAAAAATCATGCCGAATTGGTGCTCCTCCAAGTTGCATGGCTTCTTAAAACATACACTGCCTGATGTGAAAACACAGGAAACCATGCAAAGTTTGTGTGGTTTTTTTTCCCCTGTCTGCCTAGAGCAGAACTCCCATACAATCTGATCAGGCAGGTGGTGGCTCTGCAGGCCCAGCTGGTTTTGTATTCAGAAGAGGCTGGATTGCCTTCACGACGATCGTCATGTTCGGTCGGAAGTCGGCTTCGTACTGAACGCACAATGCTGCAACTGCTGCTAGCTGAAAAAAAATCATGAAAGAAAAAACAATGGCACTCACTGCTGCTTTCTGAATTTTGTCAGATTTGCTACAGTATAGCTACCTTTGCGACAGCCTTCGGAGGGTAATCATTGTTGAGCTTTGGATCGACGCACTGCTTAACTTTATCTTCGCTCAATCTTGGAGTAGCCTGCCTCACAAAGATCATGGTATATGTAAGATCATTGGAAATGGAAAGATTGAAATAGGATATATTGTAATAAGTTATCTTTTGTTGAAGGATAAAACTTCTCCTTACCCAAGTGACAAGACTTTGTTGCCCTTTTGGCATGGTGTGATCAACTGGTTTCCTTCCGGTTAGTAGCTCCAATAGAATCACGCCAAAGCTGTAAACATCGCTCTTCTGATTTATTTGCCCTGTCATGGCATATCTGAACATCACCATAATCAGACCAACAAATCGTCAGCAAGTAAATCCTGCAAAAGGCAAAGCATGCTGTACAGTCTGATACGCGAGAAATCAATCATTCTCTCCCTTACTCTGGAGCATGGTATCCAAATGTTCCTAGCACCCTAGTCGAATGCAACCGGGCAGCGGTGTCGGTGCCCTGGTTCGTCAGGTTGAAATCGGCGATCTTCGAGCTGAACTCGTCGAATATAAGAACATTGCTAGACCGAACATCTCGATGAACGATCGATGGCTGCACTTTCTCATGGAGGTACTCCAGCCCTCTCGCCGCCCCATAAGCTATCTTGACCCGTTGCGCCCAGTTCAGAACCGGGCCGGGCTCCGCGCCCTGGACTCCCTTCTTACCTGCATCACATCCAAAACCATTAATTAGCTTAGCCCTACGTGTGGAGATTTTTTGGCTCCGCCCCCTGATCACATGGGCGTAAACTTGTCGGGATTTTACTGTTGCTCTTTATCTCGTGTTTGCTTTAAATTTGGGAGTGTTTTTTTAAGTTTACTTTGAAGTACACTTGCTTCGAGTGATTTGGTGTAATAATCGGCTGTAGTTCGTTGAGTAATGACTGGGATGGTTTTCTATTCCATTATGTAAGAAAAACATAAGGTAGTAGTGAAATGGAAAAGACTTATTACCGTGAAGAATGTTGTGTAAAGAACCCATGGTTGCAAACTGGTAGGCCAGCATGCGGTTGCCGTCTTCCAAGCAGTAGCCCAAGAGCTCCAGGAAGTACTCGTTCTTGAGCTTGGACACCATCGCTATCTATGGCGACGAGATGAAGATGAGCAAAAAGCTAAGATGGCTCATGTCGCGAGGAGGAGGAAGAAGAAGAAGTGGGGTGTTTTGGGGCACACCTGGGCGGAGAACTCGGAGTCGGTCTCCTGGGAGGCGCCGGGGTCGAGCTTCTTGATGACGGCGGCGCGGCCGTCGCTGAGCGTGCCGTTGTAGACGCGGCCGTAGGAGCCCTCGCCGATGAGGGCGCGGTCGCTGAAGTTGCTGGTGATCTTCTTCAGCTCCTCGAACGGTATCGCCGGCACGTCGATGTTCACCGGCTTCGGCGGCCCGCCCGGCCGCGCCGCCCCCGGCCCTCTCGGCCCGCCTCTATTCCCTGCTTCCATCCGCCGTCGCCGGAGAAGAAGACCAAGAGACGGTCACGAAATCGGTCAGCAAAGGAGGAGAGGAATGTAGGAGGCCGCCGCCGCCGGAGAAGAGGAATGTGGAGACGCACCGGGAGCATTGACGTTGGGCGGCGGAGCGGCCTGGTTCGCCGGCGGGCCGTAGCTGTCCTCCTCGGCGCCTCCGCAGCAAGACATCTTCTTCTTCCTCCTCCTCCTCTCGCCGGAGTTGGATGCGCGGGCTGATCTGGTGGCCGCCCCCCGCTCAGCGGATCATCGCGCACGACCTGCAAACCATTTTCGATTAATTCCTCGCGTGCACACCAACAGATTAAATCCCTGAAGAATCAATTCACGAAACGGATCAATCTCTTTCCGAGGAACAGAAAATTAACTGAAAAGAAATTAAAATCAACGCACAATTTCCAGATGATCAAGCAATCATCGGAAGCAATGAGGGGATCGTGGATCAAGAAAACAGAGGATGCATGCATGCTCCATATGCGATCTGGATCGGCATGCAGAAAACGGTAGAAATTCTTACCTCCCCCAAAGATTCCCGCACGAGATCGATCGCTTCCCGCACGAGATCGATCGATGGCGATCGATCGAGGGGGGGCAAAGGGAAGAACAGCGGTGTTTTGTTCCCCGGGAGAAGAGGTTAATGGTGGGGAATGGCGGGAGCTCCCCCTCTTTCCGCGCCAAAGGAGCCACACCCCCCTGGCCCCCTCTCCCACCCGTTTTAACCGC
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| CDS seq | ATGTCTTGCTGCGGAGGCGCCGAGGAGGACAGCTACGGCCCGCCGGCGAACCAGGCCGCTCCGCCGCCCAACGTCAATGCTCCCGGGAATAGAGGCGGGCCGAGAGGGCCGGGGGCGGCGCGGCCGGGCGGGCCGCCGAAGCCGGTGAACATCGACGTGCCGGCGATACCGTTCGAGGAGCTGAAGAAGATCACCAGCAACTTCAGCGACCGCGCCCTCATCGGCGAGGGCTCCTACGGCCGCGTCTACAACGGCACGCTCAGCGACGGCCGCGCCGCCGTCATCAAGAAGCTCGACCCCGGCGCCTCCCAGGAGACCGACTCCGAGTTCTCCGCCCAGATAGCGATGGTGTCCAAGCTCAAGAACGAGTACTTCCTGGAGCTCTTGGGCTACTGCTTGGAAGACGGCAACCGCATGCTGGCCTACCAGTTTGCAACCATGGGTTCTTTACACAACATTCTTCACGGTAAGAAGGGAGTCCAGGGCGCGGAGCCCGGCCCGGTTCTGAACTGGGCGCAACGGGTCAAGATAGCTTATGGGGCGGCGAGAGGGCTGGAGTACCTCCATGAGAAAGTGCAGCCATCGATCGTTCATCGAGATGTTCGGTCTAGCAATGTTCTTATATTCGACGAGTTCAGCTCGAAGATCGCCGATTTCAACCTGACGAACCAGGGCACCGACACCGCTGCCCGGTTGCATTCGACTAGGGTGCTAGGAACATTTGGATACCATGCTCCAGAATATGCCATGACAGGGCAAATAAATCAGAAGAGCGATGTTTACAGCTTTGGCGTGATTCTATTGGAGCTACTAACCGGAAGGAAACCAGTTGATCACACCATGCCAAAAGGGCAACAAAGTCTTGTCACTTGGGCTACTCCAAGATTGAGCGAAGATAAAGTTAAGCAGTGCGTCGATCCAAAGCTCAACAATGATTACCCTCCGAAGGCTGTCGCAAAGCTAGCAGCAGTTGCAGCATTGTGCGTTCAGTACGAAGCCGACTTCCGACCGAACATGACGATCGTCGTGAAGGCAATCCAGCCTCTTCTGAATACAAAACCAGCTGGGCCTGCAGAGCCACCACCTGCCTGA
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| Protein seq | MSCCGGAEEDSYGPPANQAAPPPNVNAPGNRGGPRGPGAARPGGPPKPVNIDVPAIPFEELKKITSNFSDRALIGEGSYGRVYNGTLSDGRAAVIKKLDPGASQETDSEFSAQIAMVSKLKNEYFLELLGYCLEDGNRMLAYQFATMGSLHNILHGKKGVQGAEPGPVLNWAQRVKIAYGAARGLEYLHEKVQPSIVHRDVRSSNVLIFDEFSSKIADFNLTNQGTDTAARLHSTRVLGTFGYHAPEYAMTGQINQKSDVYSFGVILLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAVAKLAAVAALCVQYEADFRPNMTIVVKAIQPLLNTKPAGPAEPPPA |
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| Function | Probable protein kinase At2g41970 [UniProtKB/Swiss-Prot:P93749] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0565500 | OsNip_02t0565500-01 | Chr02 | 21474733 | 21477629 | - | RAP2018-11-26 | ||
| CDS seq | ATGTCTTGCTGCGGAGGCGCCGAGGAGGACAGCTACGGCCCGCCGGCGAACCAGGCCGCTCCGCCGCCCAACGTCAATGCTCCCGGGAATAGAGGCGGGCCGAGAGGGCCGGGGGCGGCGCGGCCGGGCGGGCCGCCGAAGCCGGTGAACATCGACGTGCCGGCGATACCGTTCGAGGAGCTGAAGAAGATCACCAGCAACTTCAGCGACCGCGCCCTCATCGGCGAGGGCTCCTACGGCCGCGTCTACAACGGCACGCTCAGCGACGGCCGCGCCGCCGTCATCAAGAAGCTCGACCCCGGCGCCTCCCAGGAGACCGACTCCGAGTTCTCCGCCCAGATAGCGATGGTGTCCAAGCTCAAGAACGAGTACTTCCTGGAGCTCTTGGGCTACTGCTTGGAAGACGGCAACCGCATGCTGGCCTACCAGTTTGCAACCATGGGTTCTTTACACAACATTCTTCACGGTAAGAAGGGAGTCCAGGGCGCGGAGCCCGGCCCGGTTCTGAACTGGGCGCAACGGGTCAAGATAGCTTATGGGGCGGCGAGAGGGCTGGAGTACCTCCATGAGAAAGTGCAGCCATCGATCGTTCATCGAGATGTTCGGTCTAGCAATGTTCTTATATTCGACGAGTTCAGCTCGAAGATCGCCGATTTCAACCTGACGAACCAGGGCACCGACACCGCTGCCCGGTTGCATTCGACTAGGGTGCTAGGAACATTTGGATACCATGCTCCAGAATATGCCATGACAGGGCAAATAAATCAGAAGAGCGATGTTTACAGCTTTGGCGTGATTCTATTGGAGCTACTAACCGGAAGGAAACCAGTTGATCACACCATGCCAAAAGGGCAACAAAGTCTTGTCACTTGGGCTACTCCAAGATTGAGCGAAGATAAAGTTAAGCAGTGCGTCGATCCAAAGCTCAACAATGATTACCCTCCGAAGGCTGTCGCAAAGCTAGCAGCAGTTGCAGCATTGTGCGTTCAGTACGAAGCCGACTTCCGACCGAACATGACGATCGTCGTGAAGGCAATCCAGCCTCTTCTGAATACAAAACCAGCTGGGCCTGCAGAGCCACCACCTGCCTGA
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| Protein seq | MSCCGGAEEDSYGPPANQAAPPPNVNAPGNRGGPRGPGAARPGGPPKPVNIDVPAIPFEELKKITSNFSDRALIGEGSYGRVYNGTLSDGRAAVIKKLDPGASQETDSEFSAQIAMVSKLKNEYFLELLGYCLEDGNRMLAYQFATMGSLHNILHGKKGVQGAEPGPVLNWAQRVKIAYGAARGLEYLHEKVQPSIVHRDVRSSNVLIFDEFSSKIADFNLTNQGTDTAARLHSTRVLGTFGYHAPEYAMTGQINQKSDVYSFGVILLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAVAKLAAVAALCVQYEADFRPNMTIVVKAIQPLLNTKPAGPAEPPPA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0565500 | OsNip_02t0565500-02 | Chr02 | 21475009 | 21477665 | - | IsoSeq | ||
| CDS seq | ATGGGGCGGCGAGAGGGCTGGAGTACCTCCATGAGAAAGTGCAGCCATCGATCGTTCATCGAGATGTTCGGTCTAGCAATGTTCTTATATTCGACGAGTTCAGCTCGAAGATCGCCGATTTCA |
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| Protein seq | MGRREGWSTSMRKCSHRSFIEMFGLAMFLYSTSSARRSPIS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr02 | 21477202 | 21477460 | - | OsNip_02t0565500-01 | OsNip_02t0565500-02,OsNip_02t0565500-01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.218325 | 4.724167 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0430000 | SBH | 0.175264 | 0.718953 | 3.771973 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g35760 | RBH | 0.000000 | 0.000000 | 1.214168 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0565500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0021640 | RBH | 0.000000 | 0.000000 | 1.048855 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0021740 | RBH | 0.0 | 0.0 | 1.441343 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0021750 | RBH | 0.0 | 0.0 | 6.600777 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0021440 | RBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0021390 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0352600 | RBH | 0.0791785 | 2.591335 | 0.0403465 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0021120 | RBH | 0.094771 | 0.096800 | 3.599223 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0379600 | RBH | 0.2980835 | 0.9007235 | 0.06708 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0021570 | RBH | 0.0 | 0.062709 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0021310 | RBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0021770 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0021470 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0021300 | RBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G021750 | RBH | 0.0 | 0.0 | 1.206209 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0021520 | RBH | 0.0 | 0.000000 | 9.857499 |
