Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_02g0558700 | OGI:02060840 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr02:21184134-21184694 | ||||||||
| Gene Symbol | ERF21, OsERF#021, OsERF021, OsERF21, AP2/EREBP#140, AP2/EREBP140 | ||||||||||
| DNA seq | CTAGCATCCGTCCCAGAGTGAGCCGTGGGCCCAGCTCTGGGATGAGCCGTCGGCCCCGTCGCTGCCATCTGGGCCCCACTTCGGTGGGTCCAGCAGCATGGCCTCCGCCATCTCGGCCCACAGCCTCGGCGACTCCATCTCGTCGAACTCGCCGTCGCCGCCGCCCAGCTCCAGCCGCCGCGGCGCCGCGGAGGCGGCGGCGGACACAAGCGCCGGCTCGCGGCGCACCCGCTCGGCCGCCTCGGCGGCGGCGGCGCGGATGTCGACGGGGTCGGTGGTGGCCGGCTGGGGGAGCCAGCCGACGGAGCCCGGGAAGTTGAGCTGCGCGCCGTCCCTCCCGCGCAGCCGCAGCGCCGCGACGTCGTGCGCCACCGCCGCCATCTCCGCCGAGTCGAAGCTCCCCAGCCAGATGCGGACCTTGGTCCCGGGCTGCCTGATCTCCGACACCCACTTCCCCCACTTCCGCCGCCTCACCCCCCTGTACTGCGGCCCGCCGCCGCCGCCCGCCGCCATGGCCGGCGCCGCCGCTTGCTGCTGCTGCGGCTGCTGCTCCATGACCGA
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| CDS seq | ATGGAGCAGCAGCCGCAGCAGCAGCAAGCGGCGGCGCCGGCCATGGCGGCGGGCGGCGGCGGCGGGCCGCAGTACAGGGGGGTGAGGCGGCGGAAGTGGGGGAAGTGGGTGTCGGAGATCAGGCAGCCCGGGACCAAGGTCCGCATCTGGCTGGGGAGCTTCGACTCGGCGGAGATGGCGGCGGTGGCGCACGACGTCGCGGCGCTGCGGCTGCGCGGGAGGGACGGCGCGCAGCTCAACTTCCCGGGCTCCGTCGGCTGGCTCCCCCAGCCGGCCACCACCGACCCCGTCGACATCCGCGCCGCCGCCGCCGAGGCGGCCGAGCGGGTGCGCCGCGAGCCGGCGCTTGTGTCCGCCGCCGCCTCCGCGGCGCCGCGGCGGCTGGAGCTGGGCGGCGGCGACGGCGAGTTCGACGAGATGGAGTCGCCGAGGCTGTGGGCCGAGATGGCGGAGGCCATGCTGCTGGACCCACCGAAGTGGGGCCCAGATGGCAGCGACGGGGCCGACGGCTCATCCCAGAGCTGGGCCCACGGCTCACTCTGGGACGGATGCTAG
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| Protein seq | MEQQPQQQQAAAPAMAAGGGGGPQYRGVRRRKWGKWVSEIRQPGTKVRIWLGSFDSAEMAAVAHDVAALRLRGRDGAQLNFPGSVGWLPQPATTDPVDIRAAAAEAAERVRREPALVSAAASAAPRRLELGGGDGEFDEMESPRLWAEMAEAMLLDPPKWGPDGSDGADGSSQSWAHGSLWDGC |
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| Function | Ethylene-responsive transcription factor ERF034 [UniProtKB/Swiss-Prot:Q8LBQ7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0558700 | OsNip_02t0558700-00 | Chr02 | 21184134 | 21184694 | - | RAP2018-11-26 | ||
| CDS seq | ATGGAGCAGCAGCCGCAGCAGCAGCAAGCGGCGGCGCCGGCCATGGCGGCGGGCGGCGGCGGCGGGCCGCAGTACAGGGGGGTGAGGCGGCGGAAGTGGGGGAAGTGGGTGTCGGAGATCAGGCAGCCCGGGACCAAGGTCCGCATCTGGCTGGGGAGCTTCGACTCGGCGGAGATGGCGGCGGTGGCGCACGACGTCGCGGCGCTGCGGCTGCGCGGGAGGGACGGCGCGCAGCTCAACTTCCCGGGCTCCGTCGGCTGGCTCCCCCAGCCGGCCACCACCGACCCCGTCGACATCCGCGCCGCCGCCGCCGAGGCGGCCGAGCGGGTGCGCCGCGAGCCGGCGCTTGTGTCCGCCGCCGCCTCCGCGGCGCCGCGGCGGCTGGAGCTGGGCGGCGGCGACGGCGAGTTCGACGAGATGGAGTCGCCGAGGCTGTGGGCCGAGATGGCGGAGGCCATGCTGCTGGACCCACCGAAGTGGGGCCCAGATGGCAGCGACGGGGCCGACGGCTCATCCCAGAGCTGGGCCCACGGCTCACTCTGGGACGGATGCTAG
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| Protein seq | MEQQPQQQQAAAPAMAAGGGGGPQYRGVRRRKWGKWVSEIRQPGTKVRIWLGSFDSAEMAAVAHDVAALRLRGRDGAQLNFPGSVGWLPQPATTDPVDIRAAAAEAAERVRREPALVSAAASAAPRRLELGGGDGEFDEMESPRLWAEMAEAMLLDPPKWGPDGSDGADGSSQSWAHGSLWDGC |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0398000 | SBH | 1.579731 | 0.773406 | 0.750630 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g35240 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0558700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0021340 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0021420 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0021420 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0021150 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0021070 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0348400 | RBH | 0.013705 | 0 | 0.034611 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0020810 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0374600 | RBH | 0.144783 | 0 | 0.0601155 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0021280 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0021020 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0021470 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0021170 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0021000 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G021430 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0021200 | RBH | 0.0 | 0.0 | 0.0 |
