Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_02g0521100 | OGI:02055070 | 15/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr02:18986685-18987266 | ||||||||
| Gene Symbol | ERF107, OsERF#107, OsERF107, AP2/EREBP#015, AP2/EREBP15 | ||||||||||
| DNA seq | CTCAACAGTCCCTTTCCTCCTTAGTTAACATGTTAAACATTTTCACATAGACATAAAATATTTACAAAAATTTTGATATGAAAATATTCATAAGTGATAAAAAATAAAGCAAAACCATACACATCAACAAAAAAAAATAGTAAATACTGTAAAAAATGCACAAAAGTTATATCTTACCTAGGACTACAATTTTTAGAATTAGTAGTGTGTTACCTTAGGTGACAAGAAATCAAAAGTTTTAAGCGTAAAATCGAGCAAATACCTTCTGAAAGACAAAGGCACAAACCAAATTAAACTACCCCGTTGCAAGGACATGCACACGCACACAGCACAGATGCTGAAAAAAACAAAAAATATGGCCGCCACCCATGCATGCCCACGATGACACGAGCGTATTCGATCTCTCTCGCGCGCGCTAGCTCCCGTGGCCGCCGCCGTGAGGCCACGCGCTCGGCGACGACGCCGCGGTCGTCGTCGTCGGCAGCGTCGACGGCGGGCGCGGCGCCATCGCCGGAGAGACCCCGACGAGCCGCTGCGCCGCGAAGTCCAGGATCTGCGCCGCCGGCGCCGCGGTGGCCGCAA
More
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| CDS seq | GCGGCCACCGCGGCGCCGGCGGCGCAGATCCTGGACTTCGCGGCGCAGCGGCTCGTCGGGGTCTCTCCGGCGATGGCGCCGCGCCCGCCGTCGACGCTGCCGACGACGACGACCGCGGCGTCGTCGCCGAGCGCGTGGCCTCACGGCGGCGGCCACGGGAGCTAG |
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| Protein seq | AATAAPAAQILDFAAQRLVGVSPAMAPRPPSTLPTTTTAASSPSAWPHGGGHGS |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0521100 | OsNip_02t0521100-01 | Chr02 | 18986685 | 18987266 | - | RAP2018-11-26 | ||
| CDS seq | GCGGCCACCGCGGCGCCGGCGGCGCAGATCCTGGACTTCGCGGCGCAGCGGCTCGTCGGGGTCTCTCCGGCGATGGCGCCGCGCCCGCCGTCGACGCTGCCGACGACGACGACCGCGGCGTCGTCGCCGAGCGCGTGGCCTCACGGCGGCGGCCACGGGAGCTAG |
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| Protein seq | AATAAPAAQILDFAAQRLVGVSPAMAPRPPSTLPTTTTAASSPSAWPHGGGHGS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.419491 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g32140 | RBH | 0.530515 | 0.108364 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0521100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0019210 | RBH | 0.096655 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0019330 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0019280 | RBH | 0.0 | 2.716695 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0019050 | RBH | 0.0 | 0.037982 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0019020 | RBH | 0.0 | 4.444135 | 1.091465 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0018730 | RBH | 0.112111 | 0.103216 | 0.158616 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0334700 | RBH | 0.9621405 | 6.215902 | 0.032006 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0019260 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0018980 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0019400 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0019120 | RBH | 0.118613 | 0.000000 | 0.147650 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0018930 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G019340 | RBH | 0.100557 | 0.0 | 0.228341 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0019040 | RBH | 0.000000 | 10.116198 | 0.505093 |
