Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_02g0504200 | OGI:02052170 | 12/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr02:17910631-17914502 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGCTGGTGTTGCTGCGGTTTTTGCAGGGAAAGCTATTGCAACATCAGTCATCACCTATGTCATCAACAAGGCATTCGACTACTTGAAGGATAACAAGGAAGCTGGAGGGCTGAAGCCTACTAGAGAGAGGCTGGAGAAACTCCTCCCTCAGATCAAGGTGGTCTTGGATGCTGTGGACATGGAGCATATCGGAGACCAAAGTGATGCACTGGATGCGTGGTTGTGGCAGCTCAGAGATGCTGTTGAATTGGCTAAGGATGCGCTTGATGAACTGGAGTACTACAAGCTTGAGAGGGAGGCCAAAAAAATACAAGCGGGTAGCAAGGTGAGTGGCTCTCTGCATCAGTATAAGGGCAAGATTGTTCAGCGTTTTAATCACACATTTAACACTGGGTCACTGAAGAGGTTGAAAAATGCTGTCAAGGCTTTAGCTGATGTTGCCTCTGGTGTTGAGCGATTTATCCAAGTTCTGAATCAGTTTGGCAATAAGGTTAACTTTAAACAAGAGGTGGAATTCAAGAATTTGCGTGAGACAAGCTCATTGCCTCATAGCCTAGTACTTGGAAGAGAAGAGGAGAGCAATATTGTAGTTCAGTGGCTGACCAAGCGTGAAAACAGTGCATCTGAACAGATTGTTGGCAACATCCCCATATTTTGTATAGTTGGTTTAGGGGGTATTGGGAAGACAACACTAGCTCAAGTTATATGCAACGATAACAAGGTAAAAGATTATTTTGATTTGTTCGTCTGGGTTTGTGTTTCTCACATTTTCGATGTTGAAACACTAACGAGAAAGATCCTCCAAGGTGTGACTAGAACAGAAATAGGTATGATTGGCCTAGATGCTCTCCACAAGGCACTTCAGGAGAAACTGAGTTCCAGAACCTTTCTCTTGGTACTGGATGATGTGTGGAATGATGAGAGTCTGCGTGGTTGGGAGACTTTAGTAAGTCCATTAAGATATGGGAAGACCGGAAGCAAGATCTTGCTGACAACTCGAATGGAATCAGTAGCTAATCTTGCTGCAAGAGCGATGCAAGGAGAATGCCAGTCTTTATCATTGAGTGGGCTAAAAGAAACTGAACTTCTTCTTCTGTTAGAAAGACATGCCTTTTTTGGAGTTAATCCTGATGATTATAGAAACTTGCAACACATCAGCAAGAAAATGGTAAGCAAACTCAGTGGTTCTCCATTGGCAGCAAAGGTTCTAGGTGGATTGTTGAACAACAAAAGGGATAGTAACACTTGGAACAGAATATTGGCATCAAGTGTTCATAATATACAACAGGGCAAGGAAGGGATTATGACAGTGTTAAAGTTGAGCTATCAGCATTTACCAACCCATTTGCAGTCATGTTTCAGGTATTGCAGCTTATTTCATAAAGACTATGAATTCACAAAGAAAGAATTAGTGTATTTATGGATGGGCTCAGGACTAATCCAACAATCGGTAGATGGCATGACACCAGAGGATGTTGGAATGGGATATTTAGATGCACTAACCAGAAAGTCTTTTTTTGAGATTAAATCAAGACCTCGGTCTAGTCGTGATATAAAATGTCGTTTATTTGAAGAATATTACGAGGAACGGTTTGTTGTGCATGATCTTTTGCATGAATTGGCACGGTCAGCTTCAGTGAACGAATGTGCCAGAGTTAGTATAAGTTCTGAAAAGATTCCAAATACTATTCGCCATTTATGCCTTGATGTGATAAGTCTCACTGTTGTTGAACAGATCTCCCAGTCAAAGAAATTACGCACACTTATCATGCATTTTCAAGAGCAAGATCAGGCAGAACAAGAACACATGCTCAAAAAAGTGTTGGCTGTCACAAAAAGCTTGAGGGTATTATCCCTAACCGCAAATTATCCCTTTAAGCTGCCTGATGCAGTGGGTGATCTAGTGCACCTTCGCTATTTGTCTCTCTCTCTCATGTGGGGCGAAGGAAACACGACACATTCCTGTTGGTTCCCACAAGTTGTATACAATCTATATCACTTGCAAACAATGAAGTTCAATAATCCGAGACCCGCAGTCCCTATGGAAGGACAAATGGAAGGAATGTGCAAGCTGGTTAATCTGCGCCATTTGCATCTAACTCTTGTAATAAGGCCCATGATTCCTTTTATAGGAAAGCTGACTTCTCTTCATGAGCTATATGGTTTCAGCATCCAACAAAAGGTTGGTTACACTATTGTCGAACTGAAGAATCTGAGAGACATTCATCATTTACATGTTTCAGGTCTTGAGAATGTTTGCAACATAGAAGAGGCTGCTGAAATCATGTTGGACCAGAAAGAGCATCTATCTGCAGTAACATTAGTTTGGGCTCCAGGATCATCTGACTCATGTGATCCAAGCAAAGCTGATGCAATTCTCGATAAGCTTCAACCACACTCCAACACTTCTAAATTGCAACTTGAAGGATATCCTGGTTCTCGACCTCCATTTTGGCTGCAAGATCTCATACTCATTAACTTGACATACATCTATCTACGTGATTGTCAAAGCATGCAGTGCCTTCCATATCTTGGGCATTTACCTTCTCTTCAATATCTGTACATAGTTAACATGAAGTCGGTAGAGTGTGTGGATTCATCATTTTATGGAAGTGGTGAGAAGCCTTCTGGATTGCAATCCCTTAAGGTACTAGAGATTGAGAACATGCCAGTTTGCACGGAATGGGTTGGATTGGAGGGTGAAAACTTATTTCCTCGGCTTGAGACACTAGCAGTGCGTGATTGTCAGGAGCTGAGAAGACTACCGACTTTACCTACTAGCATTCGACAAATTGAAATTGATCATGCTGGTTTACAGGCTATGCCGACATTTTTTGTGAGCAGTGATGGAAGTTCATCATCAATGTTCAACCTCTCTCTGTCTAAGCTAATGATATCCAACTGCCCGTATATAACAACTTTATGGCATGGGTGTTCTCTTTATGCTCTCGAGGAATTGTCCATCCAACAATGTGCAAGTTTATCATGTCTACCAGAAGATTCATTCAGTTCATGTTCCTCCCTGAAAACCCTTGAAATTGTGAAGTGCCCAAATCTGATCGCACGACAGATCATGTTGCCCCATACTATGAGAACCATCACTTTTGGATTGTGTGCTAATGCTGAACTTGCGTTACTAGACTCATTGACAGGTCTTAAATATCTGAAACGGATCTTTTTAGATGGTTGTGCAATGTCAAAACTCCCTTTACAACTGTTTGCAGGTTTGATAGGGCTAACTCATATGGTGTTAAATGCTTGCTCAATCGCACACCTTCCAACAGTGGAAGCCTTTGCAAGATTGATAAATCTTGAATACCTTTTCATTTGGGACTGCAAAGAGCTGGTTTCACTTATCGGGATCCAAGGTCTCGCATCGCTCATGTCATTGACAATCGCTAGCTGTGACAAGCTTGTTGAAGATTCATCTATTCTGTCACCAGAGGATGCTGATTCATCTGGCCTATCTCTGAATCTCAGTGAACTTGATATTGACCACCCATCAATCTTACTTAGAGAGCCATTGAGAAGCGTCACTACCATCAAGAGGCTTCAAATTTCTGGTGGACCTAACCTAGCACTCTTACCTGAGGAATATCTGTTGCATAACTGTCATGCCCTTGAAGAACTAGTTCTGACTAATGCTTCTCATCTGCAATGTTTACCACAAGCAGTGACAACCTTGACCTCCCTGCAGTCCATGCATATAAACAATGCAGTTAAGATTCAGACACTTCCAGATATGCCAGCATCTCTTACCAGCCTGCACATCTATGGCTGCAGCTCTGAGCTCAAGAAGAGATGCCAAAAACATGTAGGCCATGATTGGGTTAAGATTGCACATATCAGTGATGCCGACATTCGTTGAGA
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| CDS seq | ATGGCTGGTGTTGCTGCGGTTTTTGCAGGGAAAGCTATTGCAACATCAGTCATCACCTATGTCATCAACAAGGCATTCGACTACTTGAAGGATAACAAGGAAGCTGGAGGGCTGAAGCCTACTAGAGAGAGGCTGGAGAAACTCCTCCCTCAGATCAAGGTGGTCTTGGATGCTGTGGACATGGAGCATATCGGAGACCAAAGTGATGCACTGGATGCGTGGTTGTGGCAGCTCAGAGATGCTGTTGAATTGGCTAAGGATGCGCTTGATGAACTGGAGTACTACAAGCTTGAGAGGGAGGCCAAAAAAATACAAGCGGGTAGCAAGGTGAGTGGCTCTCTGCATCAGTATAAGGGCAAGATTGTTCAGCGTTTTAATCACACATTTAACACTGGGTCACTGAAGAGGTTGAAAAATGCTGTCAAGGCTTTAGCTGATGTTGCCTCTGGTGTTGAGCGATTTATCCAAGTTCTGAATCAGTTTGGCAATAAGGTTAACTTTAAACAAGAGGTGGAATTCAAGAATTTGCGTGAGACAAGCTCATTGCCTCATAGCCTAGTACTTGGAAGAGAAGAGGAGAGCAATATTGTAGTTCAGTGGCTGACCAAGCGTGAAAACAGTGCATCTGAACAGATTGTTGGCAACATCCCCATATTTTGTATAGTTGGTTTAGGGGGTATTGGGAAGACAACACTAGCTCAAGTTATATGCAACGATAACAAGGTAAAAGATTATTTTGATTTGTTCGTCTGGGTTTGTGTTTCTCACATTTTCGATGTTGAAACACTAACGAGAAAGATCCTCCAAGGTGTGACTAGAACAGAAATAGGTATGATTGGCCTAGATGCTCTCCACAAGGCACTTCAGGAGAAACTGAGTTCCAGAACCTTTCTCTTGGTACTGGATGATGTGTGGAATGATGAGAGTCTGCGTGGTTGGGAGACTTTAGTAAGTCCATTAAGATATGGGAAGACCGGAAGCAAGATCTTGCTGACAACTCGAATGGAATCAGTAGCTAATCTTGCTGCAAGAGCGATGCAAGGAGAATGCCAGTCTTTATCATTGAGTGGGCTAAAAGAAACTGAACTTCTTCTTCTGTTAGAAAGACATGCCTTTTTTGGAGTTAATCCTGATGATTATAGAAACTTGCAACACATCAGCAAGAAAATGGTAAGCAAACTCAGTGGTTCTCCATTGGCAGCAAAGGTTCTAGGTGGATTGTTGAACAACAAAAGGGATAGTAACACTTGGAACAGAATATTGGCATCAAGTGTTCATAATATACAACAGGGCAAGGAAGGGATTATGACAGTGTTAAAGTTGAGCTATCAGCATTTACCAACCCATTTGCAGTCATGTTTCAGGTATTGCAGCTTATTTCATAAAGACTATGAATTCACAAAGAAAGAATTAGTGTATTTATGGATGGGCTCAGGACTAATCCAACAATCGGTAGATGGCATGACACCAGAGGATGTTGGAATGGGATATTTAGATGCACTAACCAGAAAGTCTTTTTTTGAGATTAAATCAAGACCTCGGTCTAGTCGTGATATAAAATGTCGTTTATTTGAAGAATATTACGAGGAACGGTTTGTTGTGCATGATCTTTTGCATGAATTGGCACGGTCAGCTTCAGTGAACGAATGTGCCAGAGTTAGTATAAGTTCTGAAAAGATTCCAAATACTATTCGCCATTTATGCCTTGATGTGATAAGTCTCACTGTTGTTGAACAGATCTCCCAGTCAAAGAAATTACGCACACTTATCATGCATTTTCAAGAGCAAGATCAGGCAGAACAAGAACACATGCTCAAAAAAGTGTTGGCTGTCACAAAAAGCTTGAGGGTATTATCCCTAACCGCAAATTATCCCTTTAAGCTGCCTGATGCAGTGGGTGATCTAGTGCACCTTCGCTATTTGTCTCTCTCTCTCATGTGGGGCGAAGGAAACACGACACATTCCTGTTGGTTCCCACAAGTTGTATACAATCTATATCACTTGCAAACAATGAAGTTCAATAATCCGAGACCCGCAGTCCCTATGGAAGGACAAATGGAAGGAATGTGCAAGCTGGTTAATCTGCGCCATTTGCATCTAACTCTTGTAATAAGGCCCATGATTCCTTTTATAGGAAAGCTGACTTCTCTTCATGAGCTATATGGTTTCAGCATCCAACAAAAGGTTGGTTACACTATTGTCGAACTGAAGAATCTGAGAGACATTCATCATTTACATGTTTCAGGTCTTGAGAATGTTTGCAACATAGAAGAGGCTGCTGAAATCATGTTGGACCAGAAAGAGCATCTATCTGCAGTAACATTAGTTTGGGCTCCAGGATCATCTGACTCATGTGATCCAAGCAAAGCTGATGCAATTCTCGATAAGCTTCAACCACACTCCAACACTTCTAAATTGCAACTTGAAGGATATCCTGGTTCTCGACCTCCATTTTGGCTGCAAGATCTCATACTCATTAACTTGACATACATCTATCTACGTGATTGTCAAAGCATGCAGTGCCTTCCATATCTTGGGCATTTACCTTCTCTTCAATATCTGTACATAGTTAACATGAAGTCGGTAGAGTGTGTGGATTCATCATTTTATGGAAGTGGTGAGAAGCCTTCTGGATTGCAATCCCTTAAGGTACTAGAGATTGAGAACATGCCAGTTTGCACGGAATGGGTTGGATTGGAGGGTGAAAACTTATTTCCTCGGCTTGAGACACTAGCAGTGCGTGATTGTCAGGAGCTGAGAAGACTACCGACTTTACCTACTAGCATTCGACAAATTGAAATTGATCATGCTGGTTTACAGGCTATGCCGACATTTTTTGTGAGCAGTGATGGAAGTTCATCATCAATGTTCAACCTCTCTCTGTCTAAGCTAATGATATCCAACTGCCCGTATATAACAACTTTATGGCATGGGTGTTCTCTTTATGCTCTCGAGGAATTGTCCATCCAACAATGTGCAAGTTTATCATGTCTACCAGAAGATTCATTCAGTTCATGTTCCTCCCTGAAAACCCTTGAAATTGTGAAGTGCCCAAATCTGATCGCACGACAGATCATGTTGCCCCATACTATGAGAACCATCACTTTTGGATTGTGTGCTAATGCTGAACTTGCGTTACTAGACTCATTGACAGGTCTTAAATATCTGAAACGGATCTTTTTAGATGGTTGTGCAATGTCAAAACTCCCTTTACAACTGTTTGCAGGTTTGATAGGGCTAACTCATATGGTGTTAAATGCTTGCTCAATCGCACACCTTCCAACAGTGGAAGCCTTTGCAAGATTGATAAATCTTGAATACCTTTTCATTTGGGACTGCAAAGAGCTGGTTTCACTTATCGGGATCCAAGGTCTCGCATCGCTCATGTCATTGACAATCGCTAGCTGTGACAAGCTTGTTGAAGATTCATCTATTCTGTCACCAGAGGATGCTGATTCATCTGGCCTATCTCTGAATCTCAGTGAACTTGATATTGACCACCCATCAATCTTACTTAGAGAGCCATTGAGAAGCGTCACTACCATCAAGAGGCTTCAAATTTCTGGTGGACCTAACCTAGCACTCTTACCTGAGGAATATCTGTTGCATAACTGTCATGCCCTTGAAGAACTAGTTCTGACTAATGCTTCTCATCTGCAATGTTTACCACAAGCAGTGACAACCTTGACCTCCCTGCAGTCCATGCATATAAACAATGCAGTTAAGATTCAGACACTTCCAGATATGCCAGCATCTCTTACCAGCCTGCACATCTATGGCTGCAGCTCTGAGCTCAAGAAGAGATGCCAAAAACATGTAGGCCATGATTGGGTTAAGATTGCACATATCAGTGATGCCGACATTCGTTGA
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| Protein seq | MAGVAAVFAGKAIATSVITYVINKAFDYLKDNKEAGGLKPTRERLEKLLPQIKVVLDAVDMEHIGDQSDALDAWLWQLRDAVELAKDALDELEYYKLEREAKKIQAGSKVSGSLHQYKGKIVQRFNHTFNTGSLKRLKNAVKALADVASGVERFIQVLNQFGNKVNFKQEVEFKNLRETSSLPHSLVLGREEESNIVVQWLTKRENSASEQIVGNIPIFCIVGLGGIGKTTLAQVICNDNKVKDYFDLFVWVCVSHIFDVETLTRKILQGVTRTEIGMIGLDALHKALQEKLSSRTFLLVLDDVWNDESLRGWETLVSPLRYGKTGSKILLTTRMESVANLAARAMQGECQSLSLSGLKETELLLLLERHAFFGVNPDDYRNLQHISKKMVSKLSGSPLAAKVLGGLLNNKRDSNTWNRILASSVHNIQQGKEGIMTVLKLSYQHLPTHLQSCFRYCSLFHKDYEFTKKELVYLWMGSGLIQQSVDGMTPEDVGMGYLDALTRKSFFEIKSRPRSSRDIKCRLFEEYYEERFVVHDLLHELARSASVNECARVSISSEKIPNTIRHLCLDVISLTVVEQISQSKKLRTLIMHFQEQDQAEQEHMLKKVLAVTKSLRVLSLTANYPFKLPDAVGDLVHLRYLSLSLMWGEGNTTHSCWFPQVVYNLYHLQTMKFNNPRPAVPMEGQMEGMCKLVNLRHLHLTLVIRPMIPFIGKLTSLHELYGFSIQQKVGYTIVELKNLRDIHHLHVSGLENVCNIEEAAEIMLDQKEHLSAVTLVWAPGSSDSCDPSKADAILDKLQPHSNTSKLQLEGYPGSRPPFWLQDLILINLTYIYLRDCQSMQCLPYLGHLPSLQYLYIVNMKSVECVDSSFYGSGEKPSGLQSLKVLEIENMPVCTEWVGLEGENLFPRLETLAVRDCQELRRLPTLPTSIRQIEIDHAGLQAMPTFFVSSDGSSSSMFNLSLSKLMISNCPYITTLWHGCSLYALEELSIQQCASLSCLPEDSFSSCSSLKTLEIVKCPNLIARQIMLPHTMRTITFGLCANAELALLDSLTGLKYLKRIFLDGCAMSKLPLQLFAGLIGLTHMVLNACSIAHLPTVEAFARLINLEYLFIWDCKELVSLIGIQGLASLMSLTIASCDKLVEDSSILSPEDADSSGLSLNLSELDIDHPSILLREPLRSVTTIKRLQISGGPNLALLPEEYLLHNCHALEELVLTNASHLQCLPQAVTTLTSLQSMHINNAVKIQTLPDMPASLTSLHIYGCSSELKKRCQKHVGHDWVKIAHISDADIR |
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| Function | Putative disease resistance RPP13-like protein 1 [UniProtKB/Swiss-Prot:Q9LRR4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0504200 | OsNip_02t0504200-00 | Chr02 | 17910631 | 17914502 | + | RAP2018-11-26 | ||
| CDS seq | ATGGCTGGTGTTGCTGCGGTTTTTGCAGGGAAAGCTATTGCAACATCAGTCATCACCTATGTCATCAACAAGGCATTCGACTACTTGAAGGATAACAAGGAAGCTGGAGGGCTGAAGCCTACTAGAGAGAGGCTGGAGAAACTCCTCCCTCAGATCAAGGTGGTCTTGGATGCTGTGGACATGGAGCATATCGGAGACCAAAGTGATGCACTGGATGCGTGGTTGTGGCAGCTCAGAGATGCTGTTGAATTGGCTAAGGATGCGCTTGATGAACTGGAGTACTACAAGCTTGAGAGGGAGGCCAAAAAAATACAAGCGGGTAGCAAGGTGAGTGGCTCTCTGCATCAGTATAAGGGCAAGATTGTTCAGCGTTTTAATCACACATTTAACACTGGGTCACTGAAGAGGTTGAAAAATGCTGTCAAGGCTTTAGCTGATGTTGCCTCTGGTGTTGAGCGATTTATCCAAGTTCTGAATCAGTTTGGCAATAAGGTTAACTTTAAACAAGAGGTGGAATTCAAGAATTTGCGTGAGACAAGCTCATTGCCTCATAGCCTAGTACTTGGAAGAGAAGAGGAGAGCAATATTGTAGTTCAGTGGCTGACCAAGCGTGAAAACAGTGCATCTGAACAGATTGTTGGCAACATCCCCATATTTTGTATAGTTGGTTTAGGGGGTATTGGGAAGACAACACTAGCTCAAGTTATATGCAACGATAACAAGGTAAAAGATTATTTTGATTTGTTCGTCTGGGTTTGTGTTTCTCACATTTTCGATGTTGAAACACTAACGAGAAAGATCCTCCAAGGTGTGACTAGAACAGAAATAGGTATGATTGGCCTAGATGCTCTCCACAAGGCACTTCAGGAGAAACTGAGTTCCAGAACCTTTCTCTTGGTACTGGATGATGTGTGGAATGATGAGAGTCTGCGTGGTTGGGAGACTTTAGTAAGTCCATTAAGATATGGGAAGACCGGAAGCAAGATCTTGCTGACAACTCGAATGGAATCAGTAGCTAATCTTGCTGCAAGAGCGATGCAAGGAGAATGCCAGTCTTTATCATTGAGTGGGCTAAAAGAAACTGAACTTCTTCTTCTGTTAGAAAGACATGCCTTTTTTGGAGTTAATCCTGATGATTATAGAAACTTGCAACACATCAGCAAGAAAATGGTAAGCAAACTCAGTGGTTCTCCATTGGCAGCAAAGGTTCTAGGTGGATTGTTGAACAACAAAAGGGATAGTAACACTTGGAACAGAATATTGGCATCAAGTGTTCATAATATACAACAGGGCAAGGAAGGGATTATGACAGTGTTAAAGTTGAGCTATCAGCATTTACCAACCCATTTGCAGTCATGTTTCAGGTATTGCAGCTTATTTCATAAAGACTATGAATTCACAAAGAAAGAATTAGTGTATTTATGGATGGGCTCAGGACTAATCCAACAATCGGTAGATGGCATGACACCAGAGGATGTTGGAATGGGATATTTAGATGCACTAACCAGAAAGTCTTTTTTTGAGATTAAATCAAGACCTCGGTCTAGTCGTGATATAAAATGTCGTTTATTTGAAGAATATTACGAGGAACGGTTTGTTGTGCATGATCTTTTGCATGAATTGGCACGGTCAGCTTCAGTGAACGAATGTGCCAGAGTTAGTATAAGTTCTGAAAAGATTCCAAATACTATTCGCCATTTATGCCTTGATGTGATAAGTCTCACTGTTGTTGAACAGATCTCCCAGTCAAAGAAATTACGCACACTTATCATGCATTTTCAAGAGCAAGATCAGGCAGAACAAGAACACATGCTCAAAAAAGTGTTGGCTGTCACAAAAAGCTTGAGGGTATTATCCCTAACCGCAAATTATCCCTTTAAGCTGCCTGATGCAGTGGGTGATCTAGTGCACCTTCGCTATTTGTCTCTCTCTCTCATGTGGGGCGAAGGAAACACGACACATTCCTGTTGGTTCCCACAAGTTGTATACAATCTATATCACTTGCAAACAATGAAGTTCAATAATCCGAGACCCGCAGTCCCTATGGAAGGACAAATGGAAGGAATGTGCAAGCTGGTTAATCTGCGCCATTTGCATCTAACTCTTGTAATAAGGCCCATGATTCCTTTTATAGGAAAGCTGACTTCTCTTCATGAGCTATATGGTTTCAGCATCCAACAAAAGGTTGGTTACACTATTGTCGAACTGAAGAATCTGAGAGACATTCATCATTTACATGTTTCAGGTCTTGAGAATGTTTGCAACATAGAAGAGGCTGCTGAAATCATGTTGGACCAGAAAGAGCATCTATCTGCAGTAACATTAGTTTGGGCTCCAGGATCATCTGACTCATGTGATCCAAGCAAAGCTGATGCAATTCTCGATAAGCTTCAACCACACTCCAACACTTCTAAATTGCAACTTGAAGGATATCCTGGTTCTCGACCTCCATTTTGGCTGCAAGATCTCATACTCATTAACTTGACATACATCTATCTACGTGATTGTCAAAGCATGCAGTGCCTTCCATATCTTGGGCATTTACCTTCTCTTCAATATCTGTACATAGTTAACATGAAGTCGGTAGAGTGTGTGGATTCATCATTTTATGGAAGTGGTGAGAAGCCTTCTGGATTGCAATCCCTTAAGGTACTAGAGATTGAGAACATGCCAGTTTGCACGGAATGGGTTGGATTGGAGGGTGAAAACTTATTTCCTCGGCTTGAGACACTAGCAGTGCGTGATTGTCAGGAGCTGAGAAGACTACCGACTTTACCTACTAGCATTCGACAAATTGAAATTGATCATGCTGGTTTACAGGCTATGCCGACATTTTTTGTGAGCAGTGATGGAAGTTCATCATCAATGTTCAACCTCTCTCTGTCTAAGCTAATGATATCCAACTGCCCGTATATAACAACTTTATGGCATGGGTGTTCTCTTTATGCTCTCGAGGAATTGTCCATCCAACAATGTGCAAGTTTATCATGTCTACCAGAAGATTCATTCAGTTCATGTTCCTCCCTGAAAACCCTTGAAATTGTGAAGTGCCCAAATCTGATCGCACGACAGATCATGTTGCCCCATACTATGAGAACCATCACTTTTGGATTGTGTGCTAATGCTGAACTTGCGTTACTAGACTCATTGACAGGTCTTAAATATCTGAAACGGATCTTTTTAGATGGTTGTGCAATGTCAAAACTCCCTTTACAACTGTTTGCAGGTTTGATAGGGCTAACTCATATGGTGTTAAATGCTTGCTCAATCGCACACCTTCCAACAGTGGAAGCCTTTGCAAGATTGATAAATCTTGAATACCTTTTCATTTGGGACTGCAAAGAGCTGGTTTCACTTATCGGGATCCAAGGTCTCGCATCGCTCATGTCATTGACAATCGCTAGCTGTGACAAGCTTGTTGAAGATTCATCTATTCTGTCACCAGAGGATGCTGATTCATCTGGCCTATCTCTGAATCTCAGTGAACTTGATATTGACCACCCATCAATCTTACTTAGAGAGCCATTGAGAAGCGTCACTACCATCAAGAGGCTTCAAATTTCTGGTGGACCTAACCTAGCACTCTTACCTGAGGAATATCTGTTGCATAACTGTCATGCCCTTGAAGAACTAGTTCTGACTAATGCTTCTCATCTGCAATGTTTACCACAAGCAGTGACAACCTTGACCTCCCTGCAGTCCATGCATATAAACAATGCAGTTAAGATTCAGACACTTCCAGATATGCCAGCATCTCTTACCAGCCTGCACATCTATGGCTGCAGCTCTGAGCTCAAGAAGAGATGCCAAAAACATGTAGGCCATGATTGGGTTAAGATTGCACATATCAGTGATGCCGACATTCGTTGA
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| Protein seq | MAGVAAVFAGKAIATSVITYVINKAFDYLKDNKEAGGLKPTRERLEKLLPQIKVVLDAVDMEHIGDQSDALDAWLWQLRDAVELAKDALDELEYYKLEREAKKIQAGSKVSGSLHQYKGKIVQRFNHTFNTGSLKRLKNAVKALADVASGVERFIQVLNQFGNKVNFKQEVEFKNLRETSSLPHSLVLGREEESNIVVQWLTKRENSASEQIVGNIPIFCIVGLGGIGKTTLAQVICNDNKVKDYFDLFVWVCVSHIFDVETLTRKILQGVTRTEIGMIGLDALHKALQEKLSSRTFLLVLDDVWNDESLRGWETLVSPLRYGKTGSKILLTTRMESVANLAARAMQGECQSLSLSGLKETELLLLLERHAFFGVNPDDYRNLQHISKKMVSKLSGSPLAAKVLGGLLNNKRDSNTWNRILASSVHNIQQGKEGIMTVLKLSYQHLPTHLQSCFRYCSLFHKDYEFTKKELVYLWMGSGLIQQSVDGMTPEDVGMGYLDALTRKSFFEIKSRPRSSRDIKCRLFEEYYEERFVVHDLLHELARSASVNECARVSISSEKIPNTIRHLCLDVISLTVVEQISQSKKLRTLIMHFQEQDQAEQEHMLKKVLAVTKSLRVLSLTANYPFKLPDAVGDLVHLRYLSLSLMWGEGNTTHSCWFPQVVYNLYHLQTMKFNNPRPAVPMEGQMEGMCKLVNLRHLHLTLVIRPMIPFIGKLTSLHELYGFSIQQKVGYTIVELKNLRDIHHLHVSGLENVCNIEEAAEIMLDQKEHLSAVTLVWAPGSSDSCDPSKADAILDKLQPHSNTSKLQLEGYPGSRPPFWLQDLILINLTYIYLRDCQSMQCLPYLGHLPSLQYLYIVNMKSVECVDSSFYGSGEKPSGLQSLKVLEIENMPVCTEWVGLEGENLFPRLETLAVRDCQELRRLPTLPTSIRQIEIDHAGLQAMPTFFVSSDGSSSSMFNLSLSKLMISNCPYITTLWHGCSLYALEELSIQQCASLSCLPEDSFSSCSSLKTLEIVKCPNLIARQIMLPHTMRTITFGLCANAELALLDSLTGLKYLKRIFLDGCAMSKLPLQLFAGLIGLTHMVLNACSIAHLPTVEAFARLINLEYLFIWDCKELVSLIGIQGLASLMSLTIASCDKLVEDSSILSPEDADSSGLSLNLSELDIDHPSILLREPLRSVTTIKRLQISGGPNLALLPEEYLLHNCHALEELVLTNASHLQCLPQAVTTLTSLQSMHINNAVKIQTLPDMPASLTSLHIYGCSSELKKRCQKHVGHDWVKIAHISDADIR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.188952 | 0.387764 | 1.229823 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0378575 | RBH | 0.674854 | 0.445779 | 0.694960 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g30150 | RBH | 0.114448 | 0.261769 | 0.283553 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0504200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0018250 | RBH | 0.041725 | 1.148893 | 0.417422 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0018400 | RBH | 0.0 | 0.000000 | 0.482522 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0018300 | RBH | 0.0 | 0.0 | 1.235108 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0018070 | RBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0018050 | RBH | 0.609057 | 1.859835 | 3.038056 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0298900 | RBH | 0.524295 | 2.3612025 | 0.252358 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0017740 | SBH | 0.000000 | 0.148983 | 0.413408 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0316200 | RBH | 0.7393945 | 2.2111265 | 3.4891955 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0018280 | RBH | 0.029643 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0018000 | RBH | 0.060093 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0018390 | SBH | 0.478323 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0018170 | RBH | 0.080969 | 0.0 | 0.202249 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0017890 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G018320 | SBH | 0.058819 | 0.376113 | 1.071426 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0018030 | SBH | 0.000000 | 1.718975 | 2.031357 |
