Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_02g0490500 | OGI:02049910 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr02:17118788-17120662 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GTGCACATGCAGCGAAGTCCCAGCTACCTGGCGCGTGCATTCATTCATGTGTGGATAGACACCTCCTGAACTCCACCGGGAGAGAGACCGGATCGACCTCGCGCTTTCTCCGTCCAATCGACCATGCCGACGGCGTCGCCAGCCCACGCGGTGTTCTTCCCGTACCCGGTGCAGGGCCACGTCGCGTCGGCGCTGCACCTGGCCAAGCTCCTCCACGCCAGGGGCGGCGTCCGCGTCACCTTCGTCCACTCCGAGCGCAACCGCCGCCGCGTGATCCGCTCCCACGGCGAGGGCGCGCTCGCCGCCGGCGCCCCGGGGTTCTGCTTCGCCGCCGTCCCCGACGGCCTGCCGTCGGATGACGACGACGACGGCCCGTCCGACCCCCGCGATCTGCTCTTCTCCATCGGGGCCTGCGTCCCGCACTTGAAGAAGATCCTCGACGAGGCCGCCGCCTCGGGGGCACCGGCCACCTGCGTCGTCTCCGACGTCGACCACGTCCTGCTCGCTGCCAGGGAGATGGGCCTCCCGGCCGTCGCGTTCTGGACGACGTCCGCTTGCGGGCTCATGGCGTTCCTCCAATGCAAGGAACTCATCGACAGAGGCATCATTCCACTCAAAGGTACGAGACGACATGGACTCCAACTCTCCATCACCATTGATGCATCTTGTTAATTACTCGAGTACTTCTATCGATCTTGTCTCGAAGAGCAGACGCTGAGAAGCTGAGCAATGGCTACCTCGACAGCACGGTGGTCGACTGGGTGCCGGGGATGCCGGCGGACATGCGCCTGCGCGACTTCTTCTCCTTCGTCCGAACCACGGACACCGACGACCCCGTGCTGGCCTTCGTCGTGTCCACCATGGAGTGCCTGCGCACCGCCACGTCCGCCGTCATCCTCAACACGTTCGACGCGCTGGAGGGCGAGGTCGTCGCCGCCATGTCGCGCATCCTGCCGCCCATCTACACGGTCGGCCCGCTCCCTCAGCTCACCGCCGCATCACACGTCGTCGCTTCCGGCGCCGACCCGCCAGACACGCCGGCCCTGAGCGCCGCCAGCCTCTGCCCGGAGGACGGTGGGTGCCTCGAGTGGCTCGGCCGCAAGCGCCCGTGCTCCGTCCTGTACGTCAACTTCGGCAGCATCGTGTACTTGACGAGCACACAGCTCGTGGAGCTAGCATGGGGGCTGGCCGACAGCGGCCACGACTTCCTGTGGGTGATCAGAGACGACCAAGCTAAGGTCACCGGCGGCGACGGCCCCACCGGCGTGCTACCAGCCGAGTTCGTGGAGAAGACGAAGGGGAAGGGTTACTTGACGAGCTGGTGCCCGCAGGAGGCGGTGCTCCGGCACGACGCCATCGGCGCGTTCCTGACGCACTGCGGGTGGAACTCGGTACTCGAGGGCATCTCCAATGGCGTACCCATGCTGTGCTACCCGATGGCCGCCGATCAGCAGACAAACTGCCGGTACGCTTGCACGGAGTGGCGCGTCGGTGTGGAGGTCGGCGACGACATCGAGAGGGAAGAGGTGGCGAGGATGGTGAGGGAGGTGATGGAAGAGGAGATCAAAGGCAAGGAGGTGAGGCAGCGTGCCACGGAATGGAAGGAAAGGGCAGCCATGGCTGTGGTGCCTAGTGGAACCTCATGGGTCAACTTAGATAGGATGGTTAATGAGGTCTTTTCTCCCGGTAACAATATGTAAAATGTCGAGATTTGCTGTTGTTTCTAAATGCTTTCCATGTCATATAAATTTAAATAAGGACGATATGTGTAGGGGGCACATAATATGCGCTCAGTCGTGCGGGGGCACGCCCCACGCGGTTTCCTCCTCTAGTCTCTTATGTATATATTTATATATGTATGTATACGTTTTTTTT
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| CDS seq | ATGCCGACGGCGTCGCCAGCCCACGCGGTGTTCTTCCCGTACCCGGTGCAGGGCCACGTCGCGTCGGCGCTGCACCTGGCCAAGCTCCTCCACGCCAGGGGCGGCGTCCGCGTCACCTTCGTCCACTCCGAGCGCAACCGCCGCCGCGTGATCCGCTCCCACGGCGAGGGCGCGCTCGCCGCCGGCGCCCCGGGGTTCTGCTTCGCCGCCGTCCCCGACGGCCTGCCGTCGGATGACGACGACGACGGCCCGTCCGACCCCCGCGATCTGCTCTTCTCCATCGGGGCCTGCGTCCCGCACTTGAAGAAGATCCTCGACGAGGCCGCCGCCTCGGGGGCACCGGCCACCTGCGTCGTCTCCGACGTCGACCACGTCCTGCTCGCTGCCAGGGAGATGGGCCTCCCGGCCGTCGCGTTCTGGACGACGTCCGCTTGCGGGCTCATGGCGTTCCTCCAATGCAAGGAACTCATCGACAGAGGCATCATTCCACTCAAAGACGCTGAGAAGCTGAGCAATGGCTACCTCGACAGCACGGTGGTCGACTGGGTGCCGGGGATGCCGGCGGACATGCGCCTGCGCGACTTCTTCTCCTTCGTCCGAACCACGGACACCGACGACCCCGTGCTGGCCTTCGTCGTGTCCACCATGGAGTGCCTGCGCACCGCCACGTCCGCCGTCATCCTCAACACGTTCGACGCGCTGGAGGGCGAGGTCGTCGCCGCCATGTCGCGCATCCTGCCGCCCATCTACACGGTCGGCCCGCTCCCTCAGCTCACCGCCGCATCACACGTCGTCGCTTCCGGCGCCGACCCGCCAGACACGCCGGCCCTGAGCGCCGCCAGCCTCTGCCCGGAGGACGGTGGGTGCCTCGAGTGGCTCGGCCGCAAGCGCCCGTGCTCCGTCCTGTACGTCAACTTCGGCAGCATCGTGTACTTGACGAGCACACAGCTCGTGGAGCTAGCATGGGGGCTGGCCGACAGCGGCCACGACTTCCTGTGGGTGATCAGAGACGACCAAGCTAAGGTCACCGGCGGCGACGGCCCCACCGGCGTGCTACCAGCCGAGTTCGTGGAGAAGACGAAGGGGAAGGGTTACTTGACGAGCTGGTGCCCGCAGGAGGCGGTGCTCCGGCACGACGCCATCGGCGCGTTCCTGACGCACTGCGGGTGGAACTCGGTACTCGAGGGCATCTCCAATGGCGTACCCATGCTGTGCTACCCGATGGCCGCCGATCAGCAGACAAACTGCCGGTACGCTTGCACGGAGTGGCGCGTCGGTGTGGAGGTCGGCGACGACATCGAGAGGGAAGAGGTGGCGAGGATGGTGAGGGAGGTGATGGAAGAGGAGATCAAAGGCAAGGAGGTGAGGCAGCGTGCCACGGAATGGAAGGAAAGGGCAGCCATGGCTGTGGTGCCTAGTGGAACCTCATGGGTCAACTTAGATAGGATGGTTAATGAGGTCTTTTCTCCCGGTAACAATATGTAA
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| Protein seq | MPTASPAHAVFFPYPVQGHVASALHLAKLLHARGGVRVTFVHSERNRRRVIRSHGEGALAAGAPGFCFAAVPDGLPSDDDDDGPSDPRDLLFSIGACVPHLKKILDEAAASGAPATCVVSDVDHVLLAAREMGLPAVAFWTTSACGLMAFLQCKELIDRGIIPLKDAEKLSNGYLDSTVVDWVPGMPADMRLRDFFSFVRTTDTDDPVLAFVVSTMECLRTATSAVILNTFDALEGEVVAAMSRILPPIYTVGPLPQLTAASHVVASGADPPDTPALSAASLCPEDGGCLEWLGRKRPCSVLYVNFGSIVYLTSTQLVELAWGLADSGHDFLWVIRDDQAKVTGGDGPTGVLPAEFVEKTKGKGYLTSWCPQEAVLRHDAIGAFLTHCGWNSVLEGISNGVPMLCYPMAADQQTNCRYACTEWRVGVEVGDDIEREEVARMVREVMEEEIKGKEVRQRATEWKERAAMAVVPSGTSWVNLDRMVNEVFSPGNNM |
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| Function | 7-deoxyloganetin glucosyltransferase [UniProtKB/Swiss-Prot:F8WKW1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0490500 | OsNip_02t0490500-01 | Chr02 | 17118788 | 17120662 | + | RAP2018-11-26 | ||
| CDS seq | ATGCCGACGGCGTCGCCAGCCCACGCGGTGTTCTTCCCGTACCCGGTGCAGGGCCACGTCGCGTCGGCGCTGCACCTGGCCAAGCTCCTCCACGCCAGGGGCGGCGTCCGCGTCACCTTCGTCCACTCCGAGCGCAACCGCCGCCGCGTGATCCGCTCCCACGGCGAGGGCGCGCTCGCCGCCGGCGCCCCGGGGTTCTGCTTCGCCGCCGTCCCCGACGGCCTGCCGTCGGATGACGACGACGACGGCCCGTCCGACCCCCGCGATCTGCTCTTCTCCATCGGGGCCTGCGTCCCGCACTTGAAGAAGATCCTCGACGAGGCCGCCGCCTCGGGGGCACCGGCCACCTGCGTCGTCTCCGACGTCGACCACGTCCTGCTCGCTGCCAGGGAGATGGGCCTCCCGGCCGTCGCGTTCTGGACGACGTCCGCTTGCGGGCTCATGGCGTTCCTCCAATGCAAGGAACTCATCGACAGAGGCATCATTCCACTCAAAGACGCTGAGAAGCTGAGCAATGGCTACCTCGACAGCACGGTGGTCGACTGGGTGCCGGGGATGCCGGCGGACATGCGCCTGCGCGACTTCTTCTCCTTCGTCCGAACCACGGACACCGACGACCCCGTGCTGGCCTTCGTCGTGTCCACCATGGAGTGCCTGCGCACCGCCACGTCCGCCGTCATCCTCAACACGTTCGACGCGCTGGAGGGCGAGGTCGTCGCCGCCATGTCGCGCATCCTGCCGCCCATCTACACGGTCGGCCCGCTCCCTCAGCTCACCGCCGCATCACACGTCGTCGCTTCCGGCGCCGACCCGCCAGACACGCCGGCCCTGAGCGCCGCCAGCCTCTGCCCGGAGGACGGTGGGTGCCTCGAGTGGCTCGGCCGCAAGCGCCCGTGCTCCGTCCTGTACGTCAACTTCGGCAGCATCGTGTACTTGACGAGCACACAGCTCGTGGAGCTAGCATGGGGGCTGGCCGACAGCGGCCACGACTTCCTGTGGGTGATCAGAGACGACCAAGCTAAGGTCACCGGCGGCGACGGCCCCACCGGCGTGCTACCAGCCGAGTTCGTGGAGAAGACGAAGGGGAAGGGTTACTTGACGAGCTGGTGCCCGCAGGAGGCGGTGCTCCGGCACGACGCCATCGGCGCGTTCCTGACGCACTGCGGGTGGAACTCGGTACTCGAGGGCATCTCCAATGGCGTACCCATGCTGTGCTACCCGATGGCCGCCGATCAGCAGACAAACTGCCGGTACGCTTGCACGGAGTGGCGCGTCGGTGTGGAGGTCGGCGACGACATCGAGAGGGAAGAGGTGGCGAGGATGGTGAGGGAGGTGATGGAAGAGGAGATCAAAGGCAAGGAGGTGAGGCAGCGTGCCACGGAATGGAAGGAAAGGGCAGCCATGGCTGTGGTGCCTAGTGGAACCTCATGGGTCAACTTAGATAGGATGGTTAATGAGGTCTTTTCTCCCGGTAACAATATGTAA
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| Protein seq | MPTASPAHAVFFPYPVQGHVASALHLAKLLHARGGVRVTFVHSERNRRRVIRSHGEGALAAGAPGFCFAAVPDGLPSDDDDDGPSDPRDLLFSIGACVPHLKKILDEAAASGAPATCVVSDVDHVLLAAREMGLPAVAFWTTSACGLMAFLQCKELIDRGIIPLKDAEKLSNGYLDSTVVDWVPGMPADMRLRDFFSFVRTTDTDDPVLAFVVSTMECLRTATSAVILNTFDALEGEVVAAMSRILPPIYTVGPLPQLTAASHVVASGADPPDTPALSAASLCPEDGGCLEWLGRKRPCSVLYVNFGSIVYLTSTQLVELAWGLADSGHDFLWVIRDDQAKVTGGDGPTGVLPAEFVEKTKGKGYLTSWCPQEAVLRHDAIGAFLTHCGWNSVLEGISNGVPMLCYPMAADQQTNCRYACTEWRVGVEVGDDIEREEVARMVREVMEEEIKGKEVRQRATEWKERAAMAVVPSGTSWVNLDRMVNEVFSPGNNM
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0490500 | OsNip_02t0490500-02 | Chr02 | 17118840 | 17120662 | + | RAP2018-11-26 | ||
| CDS seq | ATGCCGACGGCGTCGCCAGCCCACGCGGTGTTCTTCCCGTACCCGGTGCAGGGCCACGTCGCGTCGGCGCTGCACCTGGCCAAGCTCCTCCACGCCAGGGGCGGCGTCCGCGTCACCTTCGTCCACTCCGAGCGCAACCGCCGCCGCGTGATCCGCTCCCACGGCGAGGGCGCGCTCGCCGCCGGCGCCCCGGGGTTCTGCTTCGCCGCCGTCCCCGACGGCCTGCCGTCGGATGACGACGACGACGGCCCGTCCGACCCCCGCGATCTGCTCTTCTCCATCGGGGCCTGCGTCCCGCACTTGAAGAAGATCCTCGACGAGGCCGCCGCCTCGGGGGCACCGGCCACCTGCGTCGTCTCCGACGTCGACCACGTCCTGCTCGCTGCCAGGGAGATGGGCCTCCCGGCCGTCGCGTTCTGGACGACGTCCGCTTGCGGGCTCATGGCGTTCCTCCAATGCAAGGAACTCATCGACAGAGGCATCATTCCACTCAAAGACGCTGAGAAGCTGAGCAATGGCTACCTCGACAGCACGGTGGTCGACTGGGTGCCGGGGATGCCGGCGGACATGCGCCTGCGCGACTTCTTCTCCTTCGTCCGAACCACGGACACCGACGACCCCGTGCTGGCCTTCGTCGTGTCCACCATGGAGTGCCTGCGCACCGCCACGTCCGCCGTCATCCTCAACACGTTCGACGCGCTGGAGGGCGAGGTCGTCGCCGCCATGTCGCGCATCCTGCCGCCCATCTACACGGTCGGCCCGCTCCCTCAGCTCACCGCCGCATCACACGTCGTCGCTTCCGGCGCCGACCCGCCAGACACGCCGGCCCTGAGCGCCGCCAGCCTCTGCCCGGAGGACGGTGGGTGCCTCGAGTGGCTCGGCCGCAAGCGCCCGTGCTCCGTCCTGTACGTCAACTTCGGCAGCATCGTGTACTTGACGAGCACACAGCTCGTGGAGCTAGCATGGGGGCTGGCCGACAGCGGCCACGACTTCCTGTGGGTGATCAGAGACGACCAAGCTAAGGTCACCGGCGGCGACGGCCCCACCGGCGTGCTACCAGCCGAGTTCGTGGAGAAGACGAAGGGGAAGGGTTACTTGACGAGCTGGTGCCCGCAGGAGGCGGTGCTCCGGCACGACGCCATCGGCGCGTTCCTGACGCACTGCGGGTGGAACTCGGTACTCGAGGGCATCTCCAATGGCGTACCCATGCTGTGCTACCCGATGGCCGCCGATCAGCAGACAAACTGCCGGTACGCTTGCACGGAGTGGCGCGTCGGTGTGGAGGTCGGCGACGACATCGAGAGGGAAGAGGTGGCGAGGATGGTGAGGGAGGTGATGGAAGAGGAGATCAAAGGCAAGGAGGTGAGGCAGCGTGCCACGGAATGGAAGGAAAGGGCAGCCATGGCTGTGGTGCCTAGTGGAACCTCATGGGTCAACTTAGATAGGATGGTTAATGAGGTCTTTTCTCCCGGTAACAATATGTAA
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| Protein seq | MPTASPAHAVFFPYPVQGHVASALHLAKLLHARGGVRVTFVHSERNRRRVIRSHGEGALAAGAPGFCFAAVPDGLPSDDDDDGPSDPRDLLFSIGACVPHLKKILDEAAASGAPATCVVSDVDHVLLAAREMGLPAVAFWTTSACGLMAFLQCKELIDRGIIPLKDAEKLSNGYLDSTVVDWVPGMPADMRLRDFFSFVRTTDTDDPVLAFVVSTMECLRTATSAVILNTFDALEGEVVAAMSRILPPIYTVGPLPQLTAASHVVASGADPPDTPALSAASLCPEDGGCLEWLGRKRPCSVLYVNFGSIVYLTSTQLVELAWGLADSGHDFLWVIRDDQAKVTGGDGPTGVLPAEFVEKTKGKGYLTSWCPQEAVLRHDAIGAFLTHCGWNSVLEGISNGVPMLCYPMAADQQTNCRYACTEWRVGVEVGDDIEREEVARMVREVMEEEIKGKEVRQRATEWKERAAMAVVPSGTSWVNLDRMVNEVFSPGNNM
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.253454 | 0.000000 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g28900 | RBH | 0.165999 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0490500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0017540 | RBH | 0.0 | 2.906020 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0017670 | RBH | 0.0 | 2.396525 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0017580 | RBH | 0.0 | 15.930233 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0017470 | RBH | 0.106693 | 0.475486 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0017360 | RBH | 1.066830 | 7.380410 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0284900 | RBH | 4.9953765 | 3.745351 | 0.5473535 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0017160 | RBH | 0.054757 | 0.090774 | 0.139496 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0306300 | RBH | 10.169532 | 3.6102535 | 0.295765 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0017670 | RBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0017240 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0017800 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0017590 | RBH | 0.245636 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0017290 | RBH | 0.0 | 2.338685 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G017740 | RBH | 0.0 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0017480 | RBH | 0.0 | 0.0 | 0.000000 |
