Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_02g0314600 | OGI:02034740 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr02:12464431-12466397 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CCTCCAACCTCTCTCCCCACCTCGCGCCTTTTTCGCTATTTTCCTCTCTCTCCCAGCGCGCGGCCACCGCCCTCTTCTTCTTCCTGTTCTTCCACCACCACATCGGCGCCGCCTGTCTCATGTGGGCTTAGCCATGACGCGGCTCGCCGTGCGCTCTCTGGTGGTCTTGTTCTTGACTGTGGCCTCGCCGTTTCTTGTTGCTGGTGGTGGTGGCGCCAAGCTCAACGCGTCGTCGTCGTCGTCGCCGCTGTACGGGATCGAGTTCCCGCCGTTCAACGCCGGCGTCGCGGATGGCGGATGCGACGGGAAGCTGATGGTGCAGGGGATGGAGGAGGTGAGCCGGTCCCCTTCGCTGAAGCTGCATATGACCCACCGGTCCGCCGCCGAGGCCGCCGCGGCGGGCAGGACGAGGAAGGAGTCGTTCTTGGATTCCGCGGGGAAGGACGTTGCCCGGATCCACACGATGCTCAGGAGGGTGGCCGGAGCAGGCGGAGGTAGGGCAGCGACGAATTCGACGCCGCGGCGCGCGCTGGCAGAGCGGATTGTGGCGACGGTGGAGTCCGGCGTCGCGGTCGGGTCCGGGGAGTACTTGGTGGATCTCTACGTCGGTACGCCGCCGCGGCGGTTCCAGATGATCATGGACACCGGCAGCGACCTCAACTGGCTGCAGTGCGCGCCCTGCCTCGATTGCTTCGAGCAGCGCGGCCCGGTGTTCGACCCGGCGGCCTCCCTTTCCTACCGCAACGTCACCTGCGGCGACCCCCGCTGCGGCCTCGTCGCGCCGCCGACGGCGCCCAGGGCGTGCCGCCGCCCGCACTCCGACCCGTGCCCGTACTACTACTGGTACGGCGACCAGTCGAACACCACCGGCGACCTCGCCCTCGAGGCCTTCACCGTCAACCTCACCGCCCCCGGCGCGTCCCGGCGCGTCGACGACGTGGTGTTCGGCTGCGGCCACTCGAACCGCGGCCTCTTCCACGGGGCCGCGGGGCTGCTCGGCCTCGGCCGCGGCGCCCTCTCCTTCGCGTCCCAGCTCCGCGCCGTGTACGGCCACGCCTTCTCCTACTGCCTCGTCGACCACGGCAGCAGCGTCGGGAGCAAGATCGTGTTCGGCGACGACGACGCGCTGCTCGGCCACCCGCGGCTCAACTACACGGCGTTCGCGCCGTCCGCGGCGGCGGCGGCGGACACATTCTACTACGTCCAGCTCAAGGGCGTCCTCGTCGGCGGCGAGAAGCTCAACATCTCGCCGTCCACGTGGGACGTCGGCAAGGACGGGTCCGGCGGCACGATCATCGACTCCGGCACGACGCTGAGCTACTTCGCGGAGCCGGCGTACGAGGTGATCCGGCGGGCGTTCGTGGAGCGAATGGACAAGGCGTACCCTCTCGTCGCCGACTTCCCGGTGCTGAGCCCGTGCTACAACGTGTCCGGCGTGGAGAGGGTGGAGGTGCCGGAGTTCTCCCTCCTGTTCGCCGACGGCGCCGTCTGGGACTTCCCGGCGGAGAACTACTTCGTCCGCCTCGACCCCGACGGCATCATGTGCCTCGCCGTCCTCGGCACGCCGCGCTCCGCCATGTCCATCATCGGCAACTTCCAGCAGCAGAACTTCCACGTCCTCTACGACCTGCAGAACAACCGCCTCGGCTTTGCGCCGCGGCGGTGCGCCGAGGTGTAAGCCGGCGCCGGCGCCGGCGCCGGCCACGAGAGGATCCACCAATTTGAAGGTCCTCATTTTGATCGAATTCGGGTTTAGGTGTGGCCAAATTTGGGGCAAATTTGGGTGTAGAAATTTTGGGGGCGGAAATTAAAGGTCAGGAGGAGGGGGTTGACACGCAAAGTTGTATGTAGCACAAAGGTTTCGAAATCTCCAAGTAACAGAGATTTTTTTAGGAATAATTAGGAATACTTTTTTACCAAAAAGATTGCAGTTTGTATACAGATTTTGGTTCAAAACATTTCGCAAG
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| CDS seq | ATGACGCGGCTCGCCGTGCGCTCTCTGGTGGTCTTGTTCTTGACTGTGGCCTCGCCGTTTCTTGTTGCTGGTGGTGGTGGCGCCAAGCTCAACGCGTCGTCGTCGTCGTCGCCGCTGTACGGGATCGAGTTCCCGCCGTTCAACGCCGGCGTCGCGGATGGCGGATGCGACGGGAAGCTGATGGTGCAGGGGATGGAGGAGGTGAGCCGGTCCCCTTCGCTGAAGCTGCATATGACCCACCGGTCCGCCGCCGAGGCCGCCGCGGCGGGCAGGACGAGGAAGGAGTCGTTCTTGGATTCCGCGGGGAAGGACGTTGCCCGGATCCACACGATGCTCAGGAGGGTGGCCGGAGCAGGCGGAGGTAGGGCAGCGACGAATTCGACGCCGCGGCGCGCGCTGGCAGAGCGGATTGTGGCGACGGTGGAGTCCGGCGTCGCGGTCGGGTCCGGGGAGTACTTGGTGGATCTCTACGTCGGTACGCCGCCGCGGCGGTTCCAGATGATCATGGACACCGGCAGCGACCTCAACTGGCTGCAGTGCGCGCCCTGCCTCGATTGCTTCGAGCAGCGCGGCCCGGTGTTCGACCCGGCGGCCTCCCTTTCCTACCGCAACGTCACCTGCGGCGACCCCCGCTGCGGCCTCGTCGCGCCGCCGACGGCGCCCAGGGCGTGCCGCCGCCCGCACTCCGACCCGTGCCCGTACTACTACTGGTACGGCGACCAGTCGAACACCACCGGCGACCTCGCCCTCGAGGCCTTCACCGTCAACCTCACCGCCCCCGGCGCGTCCCGGCGCGTCGACGACGTGGTGTTCGGCTGCGGCCACTCGAACCGCGGCCTCTTCCACGGGGCCGCGGGGCTGCTCGGCCTCGGCCGCGGCGCCCTCTCCTTCGCGTCCCAGCTCCGCGCCGTGTACGGCCACGCCTTCTCCTACTGCCTCGTCGACCACGGCAGCAGCGTCGGGAGCAAGATCGTGTTCGGCGACGACGACGCGCTGCTCGGCCACCCGCGGCTCAACTACACGGCGTTCGCGCCGTCCGCGGCGGCGGCGGCGGACACATTCTACTACGTCCAGCTCAAGGGCGTCCTCGTCGGCGGCGAGAAGCTCAACATCTCGCCGTCCACGTGGGACGTCGGCAAGGACGGGTCCGGCGGCACGATCATCGACTCCGGCACGACGCTGAGCTACTTCGCGGAGCCGGCGTACGAGGTGATCCGGCGGGCGTTCGTGGAGCGAATGGACAAGGCGTACCCTCTCGTCGCCGACTTCCCGGTGCTGAGCCCGTGCTACAACGTGTCCGGCGTGGAGAGGGTGGAGGTGCCGGAGTTCTCCCTCCTGTTCGCCGACGGCGCCGTCTGGGACTTCCCGGCGGAGAACTACTTCGTCCGCCTCGACCCCGACGGCATCATGTGCCTCGCCGTCCTCGGCACGCCGCGCTCCGCCATGTCCATCATCGGCAACTTCCAGCAGCAGAACTTCCACGTCCTCTACGACCTGCAGAACAACCGCCTCGGCTTTGCGCCGCGGCGGTGCGCCGAGGTGTAA
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| Protein seq | MTRLAVRSLVVLFLTVASPFLVAGGGGAKLNASSSSSPLYGIEFPPFNAGVADGGCDGKLMVQGMEEVSRSPSLKLHMTHRSAAEAAAAGRTRKESFLDSAGKDVARIHTMLRRVAGAGGGRAATNSTPRRALAERIVATVESGVAVGSGEYLVDLYVGTPPRRFQMIMDTGSDLNWLQCAPCLDCFEQRGPVFDPAASLSYRNVTCGDPRCGLVAPPTAPRACRRPHSDPCPYYYWYGDQSNTTGDLALEAFTVNLTAPGASRRVDDVVFGCGHSNRGLFHGAAGLLGLGRGALSFASQLRAVYGHAFSYCLVDHGSSVGSKIVFGDDDALLGHPRLNYTAFAPSAAAAADTFYYVQLKGVLVGGEKLNISPSTWDVGKDGSGGTIIDSGTTLSYFAEPAYEVIRRAFVERMDKAYPLVADFPVLSPCYNVSGVERVEVPEFSLLFADGAVWDFPAENYFVRLDPDGIMCLAVLGTPRSAMSIIGNFQQQNFHVLYDLQNNRLGFAPRRCAEV |
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| Function | Protein ASPARTIC PROTEASE IN GUARD CELL 1 [UniProtKB/Swiss-Prot:Q9LS40] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0314600 | OsNip_02t0314600-01 | Chr02 | 12464431 | 12466397 | + | RAP2018-11-26 | ||
| CDS seq | ATGACGCGGCTCGCCGTGCGCTCTCTGGTGGTCTTGTTCTTGACTGTGGCCTCGCCGTTTCTTGTTGCTGGTGGTGGTGGCGCCAAGCTCAACGCGTCGTCGTCGTCGTCGCCGCTGTACGGGATCGAGTTCCCGCCGTTCAACGCCGGCGTCGCGGATGGCGGATGCGACGGGAAGCTGATGGTGCAGGGGATGGAGGAGGTGAGCCGGTCCCCTTCGCTGAAGCTGCATATGACCCACCGGTCCGCCGCCGAGGCCGCCGCGGCGGGCAGGACGAGGAAGGAGTCGTTCTTGGATTCCGCGGGGAAGGACGTTGCCCGGATCCACACGATGCTCAGGAGGGTGGCCGGAGCAGGCGGAGGTAGGGCAGCGACGAATTCGACGCCGCGGCGCGCGCTGGCAGAGCGGATTGTGGCGACGGTGGAGTCCGGCGTCGCGGTCGGGTCCGGGGAGTACTTGGTGGATCTCTACGTCGGTACGCCGCCGCGGCGGTTCCAGATGATCATGGACACCGGCAGCGACCTCAACTGGCTGCAGTGCGCGCCCTGCCTCGATTGCTTCGAGCAGCGCGGCCCGGTGTTCGACCCGGCGGCCTCCCTTTCCTACCGCAACGTCACCTGCGGCGACCCCCGCTGCGGCCTCGTCGCGCCGCCGACGGCGCCCAGGGCGTGCCGCCGCCCGCACTCCGACCCGTGCCCGTACTACTACTGGTACGGCGACCAGTCGAACACCACCGGCGACCTCGCCCTCGAGGCCTTCACCGTCAACCTCACCGCCCCCGGCGCGTCCCGGCGCGTCGACGACGTGGTGTTCGGCTGCGGCCACTCGAACCGCGGCCTCTTCCACGGGGCCGCGGGGCTGCTCGGCCTCGGCCGCGGCGCCCTCTCCTTCGCGTCCCAGCTCCGCGCCGTGTACGGCCACGCCTTCTCCTACTGCCTCGTCGACCACGGCAGCAGCGTCGGGAGCAAGATCGTGTTCGGCGACGACGACGCGCTGCTCGGCCACCCGCGGCTCAACTACACGGCGTTCGCGCCGTCCGCGGCGGCGGCGGCGGACACATTCTACTACGTCCAGCTCAAGGGCGTCCTCGTCGGCGGCGAGAAGCTCAACATCTCGCCGTCCACGTGGGACGTCGGCAAGGACGGGTCCGGCGGCACGATCATCGACTCCGGCACGACGCTGAGCTACTTCGCGGAGCCGGCGTACGAGGTGATCCGGCGGGCGTTCGTGGAGCGAATGGACAAGGCGTACCCTCTCGTCGCCGACTTCCCGGTGCTGAGCCCGTGCTACAACGTGTCCGGCGTGGAGAGGGTGGAGGTGCCGGAGTTCTCCCTCCTGTTCGCCGACGGCGCCGTCTGGGACTTCCCGGCGGAGAACTACTTCGTCCGCCTCGACCCCGACGGCATCATGTGCCTCGCCGTCCTCGGCACGCCGCGCTCCGCCATGTCCATCATCGGCAACTTCCAGCAGCAGAACTTCCACGTCCTCTACGACCTGCAGAACAACCGCCTCGGCTTTGCGCCGCGGCGGTGCGCCGAGGTGTAA
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| Protein seq | MTRLAVRSLVVLFLTVASPFLVAGGGGAKLNASSSSSPLYGIEFPPFNAGVADGGCDGKLMVQGMEEVSRSPSLKLHMTHRSAAEAAAAGRTRKESFLDSAGKDVARIHTMLRRVAGAGGGRAATNSTPRRALAERIVATVESGVAVGSGEYLVDLYVGTPPRRFQMIMDTGSDLNWLQCAPCLDCFEQRGPVFDPAASLSYRNVTCGDPRCGLVAPPTAPRACRRPHSDPCPYYYWYGDQSNTTGDLALEAFTVNLTAPGASRRVDDVVFGCGHSNRGLFHGAAGLLGLGRGALSFASQLRAVYGHAFSYCLVDHGSSVGSKIVFGDDDALLGHPRLNYTAFAPSAAAAADTFYYVQLKGVLVGGEKLNISPSTWDVGKDGSGGTIIDSGTTLSYFAEPAYEVIRRAFVERMDKAYPLVADFPVLSPCYNVSGVERVEVPEFSLLFADGAVWDFPAENYFVRLDPDGIMCLAVLGTPRSAMSIIGNFQQQNFHVLYDLQNNRLGFAPRRCAEV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.811300 | 0.848025 | 0.757406 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g21040 | RBH | 0.504624 | 0.517010 | 0.176731 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0314600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0014200 | RBH | 0.066384 | 1.209283 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0014380 | RBH | 0.058809 | 0.987875 | 0.441071 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0014210 | RBH | 0.0 | 3.595908 | 1.218435 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0014120 | RBH | 0.0 | 0.027183 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0014030 | RBH | 0.378528 | 3.209195 | 0.967374 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0198000 | RBH | 1.250855 | 42.0858215 | 1.354821 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0013840 | RBH | 0.044067 | 0.129818 | 0.114540 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0209600 | RBH | 1.4881475 | 39.086464 | 1.415241 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0014390 | RBH | 0.0 | 0.012900 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0013940 | RBH | 0.0 | 3.546189 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0014480 | RBH | 0.0 | 2.934139 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0014290 | RBH | 0.085653 | 0.110933 | 0.309589 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0014100 | RBH | 0.054864 | 0.644364 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G014400 | RBH | 0.072855 | 0.693857 | 0.325957 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0014150 | RBH | 0.0 | 3.634987 | 0.665597 |
