Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_02g0252200 | OGI:02024730 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr02:8582543-8584532 | ||||||||
| Gene Symbol | NAC43, ONAC043, ONAC43, DLN44, OsDLN44, NAC13, ONAC013, ONAC13, ONAC064, ONA064, DLN53, OsDLN53 | ||||||||||
| DNA seq | ATCTCAAATCAGATCATCTCAAGTTCCCAAACCCTAGCTATCTCTGCTGGTCTCCCCCAAGCTCTCCTTTATATAACACAAACTACATCATCTCCTTTCTCTTGTGTGCAACATCACAAACACAACCTTTCACTCCCATCTTGGCTTTCTTTCCTGTCTCTAGCTTAGCTACCTGTTGCTTCCAAGCTGAGAAAAACCAAGCAAAAGAAGCTGTTTGTGTGCCTTTCCAAGGTATAGATTTGCATGCATATACACTTTATCCTGTCCAGTTAGAAACTTATATAAGGACTTGTAAGTTTCTTTACTGAATTAAGGTTAAGTAAACTTGCTAAATGCATGAGTTTTCTGATGCATTGTGAATTTGTGGGTATTTCTCAGAGTGAAAAAAAAAATGCATCCTAATGGCGCGCCGCTGGCCGTGCCACCGGGTTTCCGGTTCCATCCGACGGACGAGGAATTGCTCTACTACTACCTGAGGAAGAAGGTTGCTTATGAGGCCATAGATCTCGACGTCATCAGGGAGATTGACCTCAACAAGCTTGAGCCTTGGGATCTCAAAGGTATAAACACATATGCTTGCTAATTAATTAACTAGCACTTCTTTAGAAAATGAACAAACTTACAAATGTATATGTTGTGTTGGTGCTTAATTTTTTTCACAAAATCACCTAACGATTTTAAATTTAACTTTATGAATATATTGATTAACATATATATGGTTGCATTGATGCAGATCGATGCAGGATTGGGACGGGGGCGCAGGAGGAGTGGTACTTCTTCAGCCACAAGGACAAGAAGTACCCGACGGGGACGAGGACCAACCGCGCCACGGTGGCCGGCTTCTGGAAGGCCACCGGCCGTGACAAGGCCATCTTCCTCGGCAGCGGCGGCGGCACGAGGATTGGCCTGAGGAAGACGCTGGTGTTCTACACCGGAAGGGCCCCGCACGGCAAGAAGACCGACTGGATCATGCACGAGTACCGCCTCGACGACGACAATGTCGACGTCCCGGTAAGCACCATCACCATTCTAATCGATTTCAAGCTAGATAGTTTAGATCAAGTAGAGTTGAGCTCTGATTAATGGCGGTTTCTTGGAATGTTGCATTGGATGCGTGCAGGAGGAAGGATGGGTGGTGTGTAGGGTATTCAAGAAGAAGAGCATCCATCAGAGGGGCTTCGACCAGCCGGACATGGCGGCGGCGGCCGACGAGGACGAGCTCCGGTACCAGCTGCTCCACGGCGCGGGCATGTCGTCGTCGCCGGTCGACCAGAAGCACGTGCTCCTCCAAGAGCAGCTCGTCGCGCACGGCGCCCATGGCGGCGGCTTCGTCGTCCCGGCGTTCGAAGCCTCCATGCACCTCCCGCAGCTCGCCAGCGCCGACGCGGCGCCGTGCGGCGGCGGCGGCGGCGGCCATGTCGCGTTCGCCTCCATGAACCCGCTCGACGCCGCCGGCTGCGGCTCGCAGAACATGATGACGATGAAGATGGCAGCGACATCCGGTGGCGAGATGCTGCTGATGAGCGGCGGCGGCGTCGACGGCGGCCGCTTCGGCGCCGCCGCCGACTGGTCGATCCTTGACAAGCTCCTGGCGTCGCACCAGAACCTCGACCAGCTCTTCCATGGCAAGGTCGCCGGAGCGCATCAGCAGCAGCAGCAGATGGCCATGGACGCCGCCTCGTCGTTGCAGAGGTTGCCGTTCCACCATTACCTCGGGTTGGAAGCTGCAGATCTTCTCAAGTTTTCTATGTAGAAATTTTTTAGCTATATGTAATGTAGTATCTGCTTCTTGATTAATTAAGCAGGCGAATTCTTGTTTTTTTTTCTCTTCTAGTTTTGTCAAATTATTAGTACTAGTTTCAGTTTGATAAGGTTAATATCGGAGTTCTGCTAGCTACTGGCCTACTGTTCTATAAGCATGTGTATACAGACAGTCTGAATGCCGTATGAACTTCTTTCTAAATGTTTCAATTCAAGTTTGTTCATCTCG
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| CDS seq | ATGCATCCTAATGGCGCGCCGCTGGCCGTGCCACCGGGTTTCCGGTTCCATCCGACGGACGAGGAATTGCTCTACTACTACCTGAGGAAGAAGGTTGCTTATGAGGCCATAGATCTCGACGTCATCAGGGAGATTGACCTCAACAAGCTTGAGCCTTGGGATCTCAAAGATCGATGCAGGATTGGGACGGGGGCGCAGGAGGAGTGGTACTTCTTCAGCCACAAGGACAAGAAGTACCCGACGGGGACGAGGACCAACCGCGCCACGGTGGCCGGCTTCTGGAAGGCCACCGGCCGTGACAAGGCCATCTTCCTCGGCAGCGGCGGCGGCACGAGGATTGGCCTGAGGAAGACGCTGGTGTTCTACACCGGAAGGGCCCCGCACGGCAAGAAGACCGACTGGATCATGCACGAGTACCGCCTCGACGACGACAATGTCGACGTCCCGGAGGAAGGATGGGTGGTGTGTAGGGTATTCAAGAAGAAGAGCATCCATCAGAGGGGCTTCGACCAGCCGGACATGGCGGCGGCGGCCGACGAGGACGAGCTCCGGTACCAGCTGCTCCACGGCGCGGGCATGTCGTCGTCGCCGGTCGACCAGAAGCACGTGCTCCTCCAAGAGCAGCTCGTCGCGCACGGCGCCCATGGCGGCGGCTTCGTCGTCCCGGCGTTCGAAGCCTCCATGCACCTCCCGCAGCTCGCCAGCGCCGACGCGGCGCCGTGCGGCGGCGGCGGCGGCGGCCATGTCGCGTTCGCCTCCATGAACCCGCTCGACGCCGCCGGCTGCGGCTCGCAGAACATGATGACGATGAAGATGGCAGCGACATCCGGTGGCGAGATGCTGCTGATGAGCGGCGGCGGCGTCGACGGCGGCCGCTTCGGCGCCGCCGCCGACTGGTCGATCCTTGACAAGCTCCTGGCGTCGCACCAGAACCTCGACCAGCTCTTCCATGGCAAGGTCGCCGGAGCGCATCAGCAGCAGCAGCAGATGGCCATGGACGCCGCCTCGTCGTTGCAGAGGTTGCCGTTCCACCATTACCTCGGGTTGGAAGCTGCAGATCTTCTCAAGTTTTCTATGTAG
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| Protein seq | MHPNGAPLAVPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGAQEEWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKAIFLGSGGGTRIGLRKTLVFYTGRAPHGKKTDWIMHEYRLDDDNVDVPEEGWVVCRVFKKKSIHQRGFDQPDMAAAADEDELRYQLLHGAGMSSSPVDQKHVLLQEQLVAHGAHGGGFVVPAFEASMHLPQLASADAAPCGGGGGGHVAFASMNPLDAAGCGSQNMMTMKMAATSGGEMLLMSGGGVDGGRFGAAADWSILDKLLASHQNLDQLFHGKVAGAHQQQQQMAMDAASSLQRLPFHHYLGLEAADLLKFSM |
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| Function | NAC domain-containing protein 76 [UniProtKB/Swiss-Prot:Q5Z6B6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0252200 | OsNip_02t0252200-01 | Chr02 | 8582543 | 8584532 | + | RAP2018-11-26 | ||
| CDS seq | ATGCATCCTAATGGCGCGCCGCTGGCCGTGCCACCGGGTTTCCGGTTCCATCCGACGGACGAGGAATTGCTCTACTACTACCTGAGGAAGAAGGTTGCTTATGAGGCCATAGATCTCGACGTCATCAGGGAGATTGACCTCAACAAGCTTGAGCCTTGGGATCTCAAAGATCGATGCAGGATTGGGACGGGGGCGCAGGAGGAGTGGTACTTCTTCAGCCACAAGGACAAGAAGTACCCGACGGGGACGAGGACCAACCGCGCCACGGTGGCCGGCTTCTGGAAGGCCACCGGCCGTGACAAGGCCATCTTCCTCGGCAGCGGCGGCGGCACGAGGATTGGCCTGAGGAAGACGCTGGTGTTCTACACCGGAAGGGCCCCGCACGGCAAGAAGACCGACTGGATCATGCACGAGTACCGCCTCGACGACGACAATGTCGACGTCCCGGAGGAAGGATGGGTGGTGTGTAGGGTATTCAAGAAGAAGAGCATCCATCAGAGGGGCTTCGACCAGCCGGACATGGCGGCGGCGGCCGACGAGGACGAGCTCCGGTACCAGCTGCTCCACGGCGCGGGCATGTCGTCGTCGCCGGTCGACCAGAAGCACGTGCTCCTCCAAGAGCAGCTCGTCGCGCACGGCGCCCATGGCGGCGGCTTCGTCGTCCCGGCGTTCGAAGCCTCCATGCACCTCCCGCAGCTCGCCAGCGCCGACGCGGCGCCGTGCGGCGGCGGCGGCGGCGGCCATGTCGCGTTCGCCTCCATGAACCCGCTCGACGCCGCCGGCTGCGGCTCGCAGAACATGATGACGATGAAGATGGCAGCGACATCCGGTGGCGAGATGCTGCTGATGAGCGGCGGCGGCGTCGACGGCGGCCGCTTCGGCGCCGCCGCCGACTGGTCGATCCTTGACAAGCTCCTGGCGTCGCACCAGAACCTCGACCAGCTCTTCCATGGCAAGGTCGCCGGAGCGCATCAGCAGCAGCAGCAGATGGCCATGGACGCCGCCTCGTCGTTGCAGAGGTTGCCGTTCCACCATTACCTCGGGTTGGAAGCTGCAGATCTTCTCAAGTTTTCTATGTAG
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| Protein seq | MHPNGAPLAVPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGAQEEWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKAIFLGSGGGTRIGLRKTLVFYTGRAPHGKKTDWIMHEYRLDDDNVDVPEEGWVVCRVFKKKSIHQRGFDQPDMAAAADEDELRYQLLHGAGMSSSPVDQKHVLLQEQLVAHGAHGGGFVVPAFEASMHLPQLASADAAPCGGGGGGHVAFASMNPLDAAGCGSQNMMTMKMAATSGGEMLLMSGGGVDGGRFGAAADWSILDKLLASHQNLDQLFHGKVAGAHQQQQQMAMDAASSLQRLPFHHYLGLEAADLLKFSM
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0252200 | OsNip_02t0252200-02 | Chr02 | 8582647 | 8584532 | + | RAP2018-11-26 | ||
| CDS seq | ATGCATCCTAATGGCGCGCCGCTGGCCGTGCCACCGGGTTTCCGGTTCCATCCGACGGACGAGGAATTGCTCTACTACTACCTGAGGAAGAAGGTTGCTTATGAGGCCATAGATCTCGACGTCATCAGGGAGATTGACCTCAACAAGCTTGAGCCTTGGGATCTCAAAGATCGATGCAGGATTGGGACGGGGGCGCAGGAGGAGTGGTACTTCTTCAGCCACAAGGACAAGAAGTACCCGACGGGGACGAGGACCAACCGCGCCACGGTGGCCGGCTTCTGGAAGGCCACCGGCCGTGACAAGGCCATCTTCCTCGGCAGCGGCGGCGGCACGAGGATTGGCCTGAGGAAGACGCTGGTGTTCTACACCGGAAGGGCCCCGCACGGCAAGAAGACCGACTGGATCATGCACGAGTACCGCCTCGACGACGACAATGTCGACGTCCCGGAGGAAGGATGGGTGGTGTGTAGGGTATTCAAGAAGAAGAGCATCCATCAGAGGGGCTTCGACCAGCCGGACATGGCGGCGGCGGCCGACGAGGACGAGCTCCGGTACCAGCTGCTCCACGGCGCGGGCATGTCGTCGTCGCCGGTCGACCAGAAGCACGTGCTCCTCCAAGAGCAGCTCGTCGCGCACGGCGCCCATGGCGGCGGCTTCGTCGTCCCGGCGTTCGAAGCCTCCATGCACCTCCCGCAGCTCGCCAGCGCCGACGCGGCGCCGTGCGGCGGCGGCGGCGGCGGCCATGTCGCGTTCGCCTCCATGAACCCGCTCGACGCCGCCGGCTGCGGCTCGCAGAACATGATGACGATGAAGATGGCAGCGACATCCGGTGGCGAGATGCTGCTGATGAGCGGCGGCGGCGTCGACGGCGGCCGCTTCGGCGCCGCCGCCGACTGGTCGATCCTTGACAAGCTCCTGGCGTCGCACCAGAACCTCGACCAGCTCTTCCATGGCAAGGTCGCCGGAGCGCATCAGCAGCAGCAGCAGATGGCCATGGACGCCGCCTCGTCGTTGCAGAGGTTGCCGTTCCACCATTACCTCGGGTTGGAAGCTGCAGATCTTCTCAAGTTTTCTATGTAG
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| Protein seq | MHPNGAPLAVPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGAQEEWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKAIFLGSGGGTRIGLRKTLVFYTGRAPHGKKTDWIMHEYRLDDDNVDVPEEGWVVCRVFKKKSIHQRGFDQPDMAAAADEDELRYQLLHGAGMSSSPVDQKHVLLQEQLVAHGAHGGGFVVPAFEASMHLPQLASADAAPCGGGGGGHVAFASMNPLDAAGCGSQNMMTMKMAATSGGEMLLMSGGGVDGGRFGAAADWSILDKLLASHQNLDQLFHGKVAGAHQQQQQMAMDAASSLQRLPFHHYLGLEAADLLKFSM
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0530400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g15340 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0252200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0010870 | RBH | 0.0 | 3.415206 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0010990 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0010840 | RBH | 0.0 | 1.441155 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0010700 | RBH | 0.0 | 0.038007 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0010800 | RBH | 0.0 | 0.000000 | 0.729050 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0142000 | RBH | 0.027881 | 1.1661875 | 0.0071925 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0010560 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0148800 | RBH | 0.018285 | 0.466728 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0011100 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0010710 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0011110 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0011070 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0010740 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G010960 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0010750 | RBH | 0.0 | 2.463444 | 0.0 |
