Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_02g0247100 | OGI:02024030 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr02:8323863-8325789 | ||||||||
| Gene Symbol | BZIP19, OsbZIP19 | ||||||||||
| DNA seq | ACACATTCTCTCTTTGCTATCTCTACTTGCACATGTCATACATCTAGACAAGGACACTAGCTTAGCTATAGCTAGCTACTAGCCTACTACTAGTAGTAGCCTAGCTAGGAGGAGGAGGAGCTAGGATGGCGCAGTTGCCGCCGAGGGCGCCGAGCGCGGCGGCGGCGGCGGGGCAGGAGTGGTCGGCGATGGCGGCGGCGGGGGAGTTTCTTGGGTTCGCGGCGGCGAGGAGGGGGGCGCACAGGAGGTCGGCGAGCGACTCGGCGGCGTTCCTGATGGAGGCGGCGGTGCCGATGGACGACGTCATCGTCGGCGTCGGCGGCGGCGGCGAGTTCGACCGGCTCGACGACGAACAGCTCATGTCCATGTTCTCCGACGTCGAGGCGCCGGCGGTGTCCGACGGCGGCGGCGAGAGGGGGCCGGCCGGGGAGGCGCACCTCATGGACATGGGTGACGGGGACGACGGGATGGGGGCGACCTCGCCGGCCGGCGCTGGCGCAATGGCGGCGGCGGCGGCCGCCGCCGCCGCGGACGGCATTGCCGACCCCAAGAGAGTCAAGAGGTTAGTGGCAATTAATTTTGCAGTAAAAATATTCTGTTTTTCTATTTACCATAAAAAAGAGTAATATTTATCCATAAACAATGTTAAGAGTAACAGTCATGTCAAAACAAAATTTCGCACAATTCCAAGCTTTGCACGATGTAATTTTCGGAGACAAATGCACAACATTTGAGTGAATTTTTCAGGTCTAAAATTCAAGAGAATTGTGCATAACAAAAAGACTTGAATATACATGTTCTTCCATGTCAACAATCTGCTTTACTGAAACATGTACTTGCCCGTAATTAACTGTATACTAAATGCCATGTGCATGAACCATTTGAAATTCACCAAAGACCGTGAATTCGAGTGACAAATCGTGTTGAATTTAGCTGTAATTCTGGCATGCTTTGCTTCTGTTTTCAGGATTTTGGCAAACAGGCAGTCGGCGCAGCGGTCAAGGGTGAGAAAGTTGCAGTACATCTCTGAGCTTGAGCGCAGCGTCACCACTCTCCAGGTGATCCATCAATTCAACTCTCTCTCAAAAAAAAACAAAAAGAAAGGGAAAGAAAACGACTGCAACTGAGCAAAATTCTCTCAAAAATGCATTTGTGATCTGAAATTCTGAATGTTTGGCTGATTGTTACTGCAGATGGAGGTGTCAGCACTGTCACCTCGTGTGGCCTTCCTTGATCATCAGCGGTCGCTGCTCACCGTCGGCAACAGCCATCTCAAGCAAAGAATCGCCGCCCTCGCACAAGACAAGATCTTCAAAGATGGTACCAAATCTCCCTATCCATCTTTTGCATAGAATTTTTACAATTGCAGTAACCGCAATCGTAAATGTTCTGAGCTACTCTTTTCAAACAAACTTGCGAAACTTGTTTATGATTGCTTTCTAACTAGCCATGAGGATCCTGTAAACATTTCAGTAAACTCATTCCCAAAAATTCATGTGCAATGCAGCTCACCAGGAGGCTCTGAAGAAGGAGATTGAGCGGCTACGCCAAGTGTACCACCAGCAGCAGATCAAGGCCACCGGAGGCGCCGACATCGCCACGGCGGCCTCAATGCAGGCCAAGCATGAGCTGCTGGCGTGCGAGGGAGCGGCGATGCGATAGCGGAAGGCCACCGGTGACCGGTGACCGTCGGCCGGTGGGGATTTTTTTTTTTTTTTTTTGGCAATTTGCCATGTGTAAGATGACACAGCTTGGTCAGTAGTTTTGTGCAGCTTGTTAAAAAGTTGGTTGATTTTGTTGTTTCTTTATAATGTTATGTTTCGTTTTGCTCATCCTAGCAAAAAAATTGTGCTGGGATGGGAGAATTGATGTGGATGTATTGTTTGGACCCCAATTACATTTGTCCAGAAAAGGTGGTTGCTTTCAG
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| CDS seq | ATGGCGCAGTTGCCGCCGAGGGCGCCGAGCGCGGCGGCGGCGGCGGGGCAGGAGTGGTCGGCGATGGCGGCGGCGGGGGAGTTTCTTGGGTTCGCGGCGGCGAGGAGGGGGGCGCACAGGAGGTCGGCGAGCGACTCGGCGGCGTTCCTGATGGAGGCGGCGGTGCCGATGGACGACGTCATCGTCGGCGTCGGCGGCGGCGGCGAGTTCGACCGGCTCGACGACGAACAGCTCATGTCCATGTTCTCCGACGTCGAGGCGCCGGCGGTGTCCGCCGCCGCGGACGGCATTGCCGACCCCAAGAGAGTCAAGAGGTTAGTGGCAATTAATTTTGCAGTAAAAATATTCTGTTTTTCTATTTACCATAAAAAAGAGTAA |
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| Protein seq | MAQLPPRAPSAAAAAGQEWSAMAAAGEFLGFAAARRGAHRRSASDSAAFLMEAAVPMDDVIVGVGGGGEFDRLDDEQLMSMFSDVEAPAVSAAADGIADPKRVKRLVAINFAVKIFCFSIYHKKE |
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| Function | Basic leucine zipper 19 [UniProtKB/Swiss-Prot:Q6K3R9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0247100 | OsNip_02t0247100-00 | Chr02 | 8323866 | 8324946 | + | RAP2018-11-26 | ||
| CDS seq | ATGGCGCAGTTGCCGCCGAGGGCGCCGAGCGCGGCGGCGGCGGCGGGGCAGGAGTGGTCGGCGATGGCGGCGGCGGGGGAGTTTCTTGGGTTCGCGGCGGCGAGGAGGGGGGCGCACAGGAGGTCGGCGAGCGACTCGGCGGCGTTCCTGATGGAGGCGGCGGTGCCGATGGACGACGTCATCGTCGGCGTCGGCGGCGGCGGCGAGTTCGACCGGCTCGACGACGAACAGCTCATGTCCATGTTCTCCGACGTCGAGGCGCCGGCGGTGTCCGCCGCCGCGGACGGCATTGCCGACCCCAAGAGAGTCAAGAGGTTAGTGGCAATTAATTTTGCAGTAAAAATATTCTGTTTTTCTATTTACCATAAAAAAGAGTAA
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| Protein seq | MAQLPPRAPSAAAAAGQEWSAMAAAGEFLGFAAARRGAHRRSASDSAAFLMEAAVPMDDVIVGVGGGGEFDRLDDEQLMSMFSDVEAPAVSAAADGIADPKRVKRLVAINFAVKIFCFSIYHKKE |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0247100 | OsNip_02t0247100-01 | Chr02 | 8323863 | 8325789 | + | IsoSeq | ||
| CDS seq | ATGAGCTGCTGGCGTGCGAGGGAGCGGCGATGCGATAGCGGAAGGCCACCGGTGACCGGTGACCGTCGGCCGGTGGGGATTTTTTTTTTTTTTTTTTGGCAATTTGCCATGTGTAAGATGACACAGCTTGGT |
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| Protein seq | MSCWRARERRCDSGRPPVTGDRRPVGIFFFFFWQFAMCKMTQLG |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.495617 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g14910 | RBH | 0.0 | 0.0 | 0.130407 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0247100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0010610 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0010690 | RBH | 0.0 | 7.863623 | 0.144186 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0010570 | RBH | 0.0 | 11.559974 | 0.697779 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0010400 | RBH | 0.0 | 1.315079 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0010530 | RBH | 0.0 | 37.360889 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0137200 | RBH | 0.603707 | 1.2216285 | 0.4492905 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0010290 | RBH | 0.0 | 1.920836 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0145400 | RBH | 1.6417435 | 0.124672 | 3.1715275 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0010820 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0010440 | RBH | 0.0 | 16.244982 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0010760 | RBH | 0.0 | 49.890018 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0010780 | RBH | 0.0 | 1.613852 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0010460 | RBH | 0.0 | 13.235541 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G010690 | RBH | 0.0 | 16.601103 | 0.575322 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0010490 | RBH | 0.0 | 28.235922 | 0.000000 |
