Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_02g0220700 | OGI:02020120 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr02:6726353-6733548 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CCGCTAGTAACCATTCAATATTATAGGAAAGAGGACCAAAGGTAATAAGATATTAAGATGCATATTCAAGTCGATGCAGAGTAAAACTCTGTATAAATGATATACAAGATTTGCATCTGGTTAAATACCGGGCCGCAACTTTTTGCAGACGCCACAAAACTTTTGATTTCGTTTTCCCTTTTCCATTTTTTTTAACCTGACCTTTTCTCCTTTTTCCAATTATGAAGCAAGACAAAAAAGAACGAAAACCAAGATCCTATCTTTGTGGTTAAATTCTGATTCTCAGAATCACCGTTCCAAATTCCAGAACTGAACAAATTATTTACGATGGCACAGAGCACTTCGTGTTGCACCACATTTCTTCACTTGGAACTAACACACTATTGCTTTCTCCAGCAGCGCCTTTGCACGGCTTCAGAGAGAGTTTTGTCACATTTTTTTTTTCACAACAGGATGCATAGAACCTTCGTCCATGCACATCCATCCTGCATGCAGAGACTGCGAATACATCTCCACAAAGCTTCAACATGAAAAACTTGGCCTCTGTAGTAGTAGAGCTTACATACTTGTATTTTTTGTTTGACCTGAGACTTTTTTTTTCTCAGGAAGGGATGTCAGCAGTTTTCTGGAACAACTAACCGCTGTAATTGCTTCAGCGGTGACAAGAGCTGGGAGAACGATGGTCGTTTGCTTGGATCGCTGCACGAAAGAACATTGGGGGTCATTATCAGTGGAGCAAGTGGCAGGTAAAACTAGGTAGAATGAGAAGAGTAGCATGTTATCCGGGCTGGTTTGTTCTTACTTTTCCCAGCACGAAGATATTATGGTAGCCACCAGTGGGTCAATTTCTTTGGGAATTTCTAGTCGCCTGTTCTGGAACCCAACTGCTCCTACAACTTGCATTGGATTCAGTCCACTCCATGGTACACGCATTGTTGCTAGTTCCCATAGGATTACTCCAAAACTGTATACGTCACACCTGATGCCAGCATTCAATTTTCAATCAGCAGGAGAACATGACAGGAAGTAAATGGAAAGGCCAACATGTCATGAGAAAACTAAGCAACTCACTTCTCATTTGATGGCTCATTACGTAGAACCTCTGGTGCCATCCACTCCGGCTGTAGCCCAACATAAAATATGGTCAAGGTGATGGAATAATTAGCTAATTACAGGAAACACCCACCAAATGAACAATAAAAATGTTATTAATATAGTACACTATGCCACTACATGATCTTGGATTAACAATGAGTTGTCTAAAAAGGGTGAGGCTCTACTTCCAGAAAAAAATAAAAAGACCCTGTGAAAGTAACTAGGGTAAAGAGAGCATGGCTTGAACTGATCTATACAAAATTAGTTGTGCAGAGCAAACTACATTGCACAATGTTTTGCATAAACCATTCTGTTTGAGGACACCGGCACTATCCAATGCCTCAAATATTGCATCTAAACACCAGGCAGAGCAATCAATGTGTTATTTTGAAGTCTAAAGTTCAAATGATTTGCATATCCTAGCCGTGTAAAGTGCAATAGTGCGATATTCCAGAGTTTCTGGAGAACAAAGATGAAAAAAAAAACACCTTATCATACAATCAAAACGAGGTAAAACATGAAAAAGAAAGTCACCAGAGCATCAAGGATATTACTGTTCCAGCTGTTGATTTAGAGGACAGGAAAGTGTGATGTTTCAACCTTGACATGCCAAAATCTGACACCTGCATGAAAAAATGCATGTATTTACAATATTATTAGTCTATACGACATGAAGCTTTTTGTGATGCAATTGCTAATTAAAGAGGAACATGGATCCCTCCATTTTAATGGGCATTGCTGAATTCTGATAAACAATTTGTCAAGTATTCTACACAAGTTTAGCTAGATCTACTTTACTTGCATGTATAGTAGAACCAGCAACTTGTTACCAGTACATCCCTCACTCTAAGCTAACAGAACCTTGATATTTAACTACTTCTCCATAAATCTCCCCAAAGCACCCAAACAGCAGCTAATGCCTAGAGGTCTCCACTAGCATACCTTTTCATGGGCTGTTTTGATTTGATGAATGAGATGGTGAATGGACCACCCAATCCAAAATCTAAACATACCTACTTGTGTGGTTTGAGGAAATAAATGGTTTGGTCCATGTGACCATGTCCATAACCATCTCATCCATCAAACACATATAGTGAAGTATGAGAAACATGGTCATTCCCAAAAGCAGGGGAATAACCATATGAGAAATATGACTCTATAAGAAATATGCAACAGCTTAAACCAAGCAGACCATAAATTCATTTGGTACAACATCCCATCTTGATAGCTTATGGTCTTGCCTAAGAATAACCCAGAAGTATAGGATTATTTAAATGGTCGCTCAACAACTGGGTATCAGACAAGCTGATCAGTGGCAGACTGGCAGTCACCACAAGGTCTGTTTACATACAGTATTATAATCGAGAGAATGTAGTCCAGTGTATCCAAATGTTCTGTTTCATGTAAACACTACATTGAAAAAAAAAGAGCAGAACATCTTTTTGATACCAAACAAATATCATATCAACTTCAGCAAATCTTATATTCTTCCTATGAGAAAACAGACAAGGTTTATCCAAGATGAAACAGAACAACAAGACTAGTAAGCTTTTTTTTTCTGTATTGAATGAGAAGAGGGTTGTGATTTCTGAGAAAGTCACCTTAACAACCCAATTTTTATCCACTAAAAGATTTGGGGATTTCAAGTCACGATGCACAATAGTAGGATGGCTAGCATGCAAGTAGTTCATCCCTTTTGCCTGCAAGACAATAATAAACTGTCAACACGGTATAAAAATAAGCATCAACAACGAAAACAAACAAAACAGCTTCCTGAAGCTTACCACATCCAATGCCATTTTTAGCCTTCGTGTTTCATCAATTTGACTGTTTGGCCTATGCAATAGGCGGTAAAGGCTCCCTCTGAAAAAGGAAGTATGTTATCTTTGTTGTAATATCTCTTTCCGCTCATATAACATATGCACAAAAGTAGAAGGAGCCAATGGTTATGTTGACTGAATAAACCAAAAACAAAGTTGGAGGAACCTTGGAAGGTATTCAGTTAATATCGAAAGATTTGGTGGTTGTGTCACATATCCCAAGAACAGAACTACATTTGGATGCCTCAGCCTTGACATGATCCCAACCTTGAAGAGAAGGAATGCACACTCAGTTGAGGAAATAAAGTCGATAATATTTATACACAAACTCCAAAAGAGATGCAATGCATTAAATCTTAAAAGTGGACTCACTTCACATTTGAATTGATCTAGTGCAACACCCGATAAATCCTGGTCAAGAAATTTCTTCACTGCAACTTCCTGCAATAGATGAGGACAATAAATTACCAGAGCAAGAAACTCACAAAACAATGGCAATTTAGGTGAAAATGAATCATATATGTTTTGTTTCTTCCAGCTTGGTAAATTTGTTACAGTGGGCCTGATATTTCCCTATTTTGTTTTATTGGCCTTCCTAGGCAACAAACCTTTGATATCCAATAGTTACCTGTTAAAAGTCACTGCTTTGCAATACAATGAACCAGTGGTGGCTCTATTTATGAGCTAGTTCGTACAGACACAGTAGTTATCCAGTCCTGTACTGTCTTACTATTTAAGCTATAGACCTTACGACCACTTCGTACTACTAGCAAAATATAATATAAGAATTGCTCTTCAAATATGTGACTTACAGTGCCATTCCAATCTGCATGATATACTTCCCCATATGAACCTGCAAAAATAAATTTAGTTTAGAACACAGAGAGTAATGGTACAAAAGAAAAGTATCCAATACATTACAGAGTAATGGTATAAAATAACACAAAATTTAACTTAGTTCAGTATGTAAAAAAAATTAAAAAGGAAATAACGATGGGGATCACATTGCAAAATCCAGCTAATTTATTCCACTCTCTAGCCTGAATAAGTGCAGTTTTATTTTTATTTTTCAGTGTCTCCATAATACAACTTTGGCCAATAACACAGAAAACACCATTGGTTGACAGCGAATTATAACGCAATGAAAGTGGTGTTGGTTTAGTTGTAAAAGTTCATAATTTAGAACACCTTCATTCTAAAACTGAACCATTAGCAAGTTCCTGAATAAAAAAAAATCCATGATACGCGCAGCAGATATCGTATATTTTGGAAATTAGAGGCATTCAGACAAGCACCAGTCGTTAAAATAGAACAATGTCTGTGAAACAAGATCGATTTCACAATACAAAGCTTCAAAGTGGATGACTACCAAAAATGTTAAGGAAGAACCATAAAAAGTCTGAATTTTCAATCAAATAAATGAATGTATTTATTACTAATGTATTTAGTGCCATGTAGAGAGCAAGAGACATTTACTCTTTCTGCATATATATTCATGTAACTTGGTGTTCATTGTAAACTTGAAATGCAGTATGTTGTCCCCTTAGAGAAGCTACCTCTTAATTAACTACTTACTGCTATACTAGTAAGTGGTAATATAAGATCTTGGAATTAATGCAGATACCTAGACCAATGCGCTCTCCAATATGAAGATCTTCCCATGGTATTTCATAGTCAGCAACGTCATCTATAACAGAGCTGATTGTTTTCGTGCTAGAACAGCTCGACTTGTCCAAGTTTCCATTGCTACTTCCTGGCATCTTCACCAAAGAGTCCTCAGAAAACCTTTGGTCCTCGTTGGCAATGGCATGAGCTGTATGATCATGCAAATCCAAATTTCTGCCAATTGCTTCTGTATTCCCCACATCATGCTGTGCATCTTCATGGAAACAATTCACTACTGCTAGTGTTTTGGTATTGCCATGTTGCAATGGAGAATCTTCCGCTACATGACCATTTGGCAAATTTTGACCTGTTTTAGCGATTACCAACCATCCTGCAGTTTTGTCATCTTCAGAAGCAGTATGTTTGCATATTTCAGGTTTCTCATAGGTGGGTAGCAATGCAGTGCCCTCCAGGAGCAAGTCTTGCAAATTTTGTGCAAACTGTGGGTCCACTTCTGTGGGCACTAAATACATGGGAGCATCGTTGACTTTCATCAGATGCGGAATTTCCCCTCCATCAGATATGGTACTTTGTTTAAGCGGGTTCTCTGTGTGGAAGATGTCTTCCAGCTGTGAACTTGCAAGTGCTAAAGCAGATTTTTGTTCAGATGAACTTCCCCCCATGTCACTTGTATTCTTACATCCAGCACTAATCTGCTCAAGGGCTATGCATAGTTCTGCAACACTCTCCTCGATGGCATCATTGCTCAGTTGACTATTGTTGGAGTCCTGAAACTGACTGCCAGAAATATCTGAAGGGATTAATGTGCCTGGAGCTCCCATCAGATCAACTATATATTCAACACTGCAATAGGATTTGATTGTTATATATCAACACAGAAGATGTCCTAATATTAAATACTGAAAGATTGTAAAGATACAATGTAGATACCTGTCAAAATCAATTTTAACCAAGTTAATAGCCCCTTCATCTGTCCCCGTATAATATATTCCTTTGACAAGCTTGCATGGTAGATTAACTCGATCAGCTAGTACCTGAAACCAATCTGATCAGTTATTTTCTTTGTCCAACAGAAACCTACTTACGTAGAAAGCTGTCACCAAGATATGTAGTCAATGAAACAAGGTTCAAAGGTGTTTCTTTTTCATCAACCATTTCAATTATCCATTCCATACAGCAAATTCAAGATTTACCGATGCCCATAAATGAACTAGATTGGCTTCCACAGTTGGACTACCACAGCTCATAATGGACAATATAACTGGTTGAAGGTGAGTACTAAACATCTAAACATTTTTCAATATCATAACTGGAATCGGGAATCATTTGTGCTTTAAACAACCATTCCACAATGTAAATTGTGCAACAAGATGGAAATTGTTACCATGGGGCTATTCCCATATTTTCTTACACTTGACATAATTTAATGCCCTATGTGAATGACTGGATTGAAGTAGAATACAGTACTTCTGCAGAGATACTAACCTTAAATAGCAAAGATCTGTGGCGCGACAACCCAATGCGAAGCAAACCAAGAGGGAGAACAATACTGTTGCGCTGAAGGCATAGCGCGCGGCTCTTCACTCCCCATTCCCTGTTCATTTCATCAGCATCATCCACCGGACCGCCCATAGCATCAACCACAAGGTTTGCAATCTTCTGCACGAGCTCCGGCGAAGCGACTCCACCATGCTCCGCCCTATCCTGCGCGGCAATTGCCAGAGCCCTCCCTTCGAGCCGCTTCAGCGCCGGATCACGCTCCCGATTGACCAAAACTGCCACGTACGCGGCGTCTCCACCGACGGGAACCGCCCTGAGGGTGGTCAGGGAGGGGAATTTGGCCTGGAAGTGCGGATGCATCGGCGCGCCGCACACATCGTAGAACCCGTCGGAGAGCCTCTCGTCGTAGTTGACGACGCAGTGGTTCCAGTACCGCGCGGAGAGGGCCTCCATGGGGCCCCGGTCCCCGGCGGCGCCGCCGAGGCTGATGCGCTCGGCGGCCCGGATCTGGACCGAGTCGGCGTCCACGAGCCCCGCGTGATCCGACGCCGAGATGGCCAGCGCGAGCCGCACCTGGTACTCCTCCTCCAGCCGCGTCATCGTCGCGTCCGCCCCCATCCCCCTCGGCTCCGCCGCCGCCGCCGCCACCGGAGCCGCAACAGGAGCCATCACCGGCGCCGCCTCGGCCGCCGCCGCCGCGGCGACGACCGGAGGAGGCGGCAGCGGCGGGGGCTGCGCCGACGACCGCCGATGCTGCCGCGGGCGGTGGTGGTGCTCCCCCGACGGGGCCCCCGCCGCCGCCGCTCCTCCGCCGCTCCCGCCCCCACCCGAGAGGTGGAGCTTCCGCAGCAGATGCTTCATGCGTGACATGGATTACCACCACCACCACGGAATCATACAACTCCTCCTCCTCCTCCTCCTCCCTGATCCGATCCGCCTACCCAACCCAACGAATCAGCGTACCCCGACGAACTCACCTCCTCCCTCCTCCGAGCACCACCGCCGCCGATCTACCAATCCATTCCCGCGCTGCTCGATCGCGCGGCGGCCGCTGTAAATTCGTTGCTTCGCGTCGGCTTCGCCTCGGCGCGCGGGGGGTAGCAGCTGCCAAGGTGAAGCGAGGAAGAAGAAGAAGAAGGCATCGGCATCTTCCCC
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| CDS seq | ATGTCACGCATGAAGCATCTGCTGCGGAAGCTCCACCTCTCGGGTGGGGGCGGGAGCGGCGGAGGAGCGGCGGCGGCGGGGGCCCCGTCGGGGGAGCACCACCACCGCCCGCGGCAGCATCGGCGGTCGTCGGCGCAGCCCCCGCCGCTGCCGCCTCCTCCGGTCGTCGCCGCGGCGGCGGCGGCCGAGGCGGCGCCGGTGATGGCTCCTGTTGCGGCTCCGGTGGCGGCGGCGGCGGCGGAGCCGAGGGGGATGGGGGCGGACGCGACGATGACGCGGCTGGAGGAGGAGTACCAGGTGCGGCTCGCGCTGGCCATCTCGGCGTCGGATCACGCGGGGCTCGTGGACGCCGACTCGGTCCAGATCCGGGCCGCCGAGCGCATCAGCCTCGGCGGCGCCGCCGGGGACCGGGGCCCCATGGAGGCCCTCTCCGCGCGGTACTGGAACCACTGCGTCGTCAACTACGACGAGAGGCTCTCCGACGGGTTCTACGATGTGTGCGGCGCGCCGATGCATCCGCACTTCCAGGCCAAATTCCCCTCCCTGACCACCCTCAGGGCGGTTCCCGTCGGTGGAGACGCCGCGTACGTGGCAGTTTTGGTCAATCGGGAGCGTGATCCGGCGCTGAAGCGGCTCGAAGGGAGGGCTCTGGCAATTGCCGCGCAGGATAGGGCGGAGCATGGTGGAGTCGCTTCGCCGGAGCTCGTGCAGAAGATTGCAAACCTTGTGGTTGATGCTATGGGCGGTCCGGTGGATGATGCTGATGAAATGAACAGGGAATGGGGAGTGAAGAGCCGCGCGCTATGCCTTCAGCGCAACAGTATTGTTCTCCCTCTTGGTTTGCTTCGCATTGGGTTGTCGCGCCACAGATCTTTGCTATTTAAGGTACTAGCTGATCGAGTTAATCTACCATGCAAGCTTGTCAAAGGAATATATTATACGGGGACAGATGAAGGGGCTATTAACTTGGTTAAAATTGATTTTGACAGTGTTGAATATATAGTTGATCTGATGGGAGCTCCAGGCACATTAATCCCTTCAGATATTTCTGGCAGTCAGTTTCAGGACTCCAACAATAGTCAACTGAGCAATGATGCCATCGAGGAGAGTGTTGCAGAACTATGCATAGCCCTTGAGCAGATTAGTGCTGGATGTAAGAATACAAGTGACATGGGGGGAAGTTCATCTGAACAAAAATCTGCTTTAGCACTTGCAAGTTCACAGCTGGAAGACATCTTCCACACAGAGAACCCGCTTAAACAAAGTACCATATCTGATGGAGGGGAAATTCCGCATCTGATGAAAGTCAACGATGCTCCCATGTATTTAGTGCCCACAGAAGTGGACCCACAGTTTGCACAAAATTTGCAAGACTTGCTCCTGGAGGGCACTGCATTGCTACCCACCTATGAGAAACCTGAAATATGCAAACATACTGCTTCTGAAGATGACAAAACTGCAGGATGGTTGGTAATCGCTAAAACAGGTCAAAATTTGCCAAATGGTCATGTAGCGGAAGATTCTCCATTGCAACATGGCAATACCAAAACACTAGCAGTAGTGAATTGTTTCCATGAAGATGCACAGCATGATGTGGGGAATACAGAAGCAATTGGCAGAAATTTGGATTTGCATGATCATACAGCTCATGCCATTGCCAACGAGGACCAAAGGTTTTCTGAGGACTCTTTGGTGAAGATGCCAGGAAGTAGCAATGGAAACTTGGACAAGTCGAGCTGTTCTAGCACGAAAACAATCAGCTCTGTTATAGATGACGTTGCTGACTATGAAATACCATGGGAAGATCTTCATATTGGAGAGCGCATTGGTCTAGGTTCATATGGGGAAGTATATCATGCAGATTGGAATGGCACTGAAGTTGCAGTGAAGAAATTTCTTGACCAGGATTTATCGGGTGTTGCACTAGATCAATTCAAATGTGAAGTTGGGATCATGTCAAGGCTGAGGCATCCAAATGTAGTTCTGTTCTTGGGATATGTGACACAACCACCAAATCTTTCGATATTAACTGAATACCTTCCAAGAGGGAGCCTTTACCGCCTATTGCATAGGCCAAACAGTCAAATTGATGAAACACGAAGGCTAAAAATGGCATTGGATGTGGCAAAAGGGATGAACTACTTGCATGCTAGCCATCCTACTATTGTGCATCGTGACTTGAAATCCCCAAATCTTTTAGTGGATAAAAATTGGGTTGTTAAGGTGTCAGATTTTGGCATGTCAAGGTTGAAACATCACACTTTCCTGTCCTCTAAATCAACAGCTGGAACAGTAATATCCTTGATGCTCTGCCGGAGTGGATGGCACCAGAGGTTCTACGTAATGAGCCATCAAATGAGAAGTGTGACGTATACAGTTTTGGAGTAA
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| Protein seq | MSRMKHLLRKLHLSGGGGSGGGAAAAGAPSGEHHHRPRQHRRSSAQPPPLPPPPVVAAAAAAEAAPVMAPVAAPVAAAAAEPRGMGADATMTRLEEEYQVRLALAISASDHAGLVDADSVQIRAAERISLGGAAGDRGPMEALSARYWNHCVVNYDERLSDGFYDVCGAPMHPHFQAKFPSLTTLRAVPVGGDAAYVAVLVNRERDPALKRLEGRALAIAAQDRAEHGGVASPELVQKIANLVVDAMGGPVDDADEMNREWGVKSRALCLQRNSIVLPLGLLRIGLSRHRSLLFKVLADRVNLPCKLVKGIYYTGTDEGAINLVKIDFDSVEYIVDLMGAPGTLIPSDISGSQFQDSNNSQLSNDAIEESVAELCIALEQISAGCKNTSDMGGSSSEQKSALALASSQLEDIFHTENPLKQSTISDGGEIPHLMKVNDAPMYLVPTEVDPQFAQNLQDLLLEGTALLPTYEKPEICKHTASEDDKTAGWLVIAKTGQNLPNGHVAEDSPLQHGNTKTLAVVNCFHEDAQHDVGNTEAIGRNLDLHDHTAHAIANEDQRFSEDSLVKMPGSSNGNLDKSSCSSTKTISSVIDDVADYEIPWEDLHIGERIGLGSYGEVYHADWNGTEVAVKKFLDQDLSGVALDQFKCEVGIMSRLRHPNVVLFLGYVTQPPNLSILTEYLPRGSLYRLLHRPNSQIDETRRLKMALDVAKGMNYLHASHPTIVHRDLKSPNLLVDKNWVVKVSDFGMSRLKHHTFLSSKSTAGTVISLMLCRSGWHQRFYVMSHQMRSVTYTVLE |
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| Function | Probable serine/threonine-protein kinase SIS8 [UniProtKB/Swiss-Prot:Q9C9U5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0220700 | OsNip_02t0220700-01 | Chr02 | 6726465 | 6733496 | - | RAP2018-11-26 | ||
| CDS seq | ATGTCACGCATGAAGCATCTGCTGCGGAAGCTCCACCTCTCGGGTGGGGGCGGGAGCGGCGGAGGAGCGGCGGCGGCGGGGGCCCCGTCGGGGGAGCACCACCACCGCCCGCGGCAGCATCGGCGGTCGTCGGCGCAGCCCCCGCCGCTGCCGCCTCCTCCGGTCGTCGCCGCGGCGGCGGCGGCCGAGGCGGCGCCGGTGATGGCTCCTGTTGCGGCTCCGGTGGCGGCGGCGGCGGCGGAGCCGAGGGGGATGGGGGCGGACGCGACGATGACGCGGCTGGAGGAGGAGTACCAGGTGCGGCTCGCGCTGGCCATCTCGGCGTCGGATCACGCGGGGCTCGTGGACGCCGACTCGGTCCAGATCCGGGCCGCCGAGCGCATCAGCCTCGGCGGCGCCGCCGGGGACCGGGGCCCCATGGAGGCCCTCTCCGCGCGGTACTGGAACCACTGCGTCGTCAACTACGACGAGAGGCTCTCCGACGGGTTCTACGATGTGTGCGGCGCGCCGATGCATCCGCACTTCCAGGCCAAATTCCCCTCCCTGACCACCCTCAGGGCGGTTCCCGTCGGTGGAGACGCCGCGTACGTGGCAGTTTTGGTCAATCGGGAGCGTGATCCGGCGCTGAAGCGGCTCGAAGGGAGGGCTCTGGCAATTGCCGCGCAGGATAGGGCGGAGCATGGTGGAGTCGCTTCGCCGGAGCTCGTGCAGAAGATTGCAAACCTTGTGGTTGATGCTATGGGCGGTCCGGTGGATGATGCTGATGAAATGAACAGGGAATGGGGAGTGAAGAGCCGCGCGCTATGCCTTCAGCGCAACAGTATTGTTCTCCCTCTTGGTTTGCTTCGCATTGGGTTGTCGCGCCACAGATCTTTGCTATTTAAGGTACTAGCTGATCGAGTTAATCTACCATGCAAGCTTGTCAAAGGAATATATTATACGGGGACAGATGAAGGGGCTATTAACTTGGTTAAAATTGATTTTGACAGTGTTGAATATATAGTTGATCTGATGGGAGCTCCAGGCACATTAATCCCTTCAGATATTTCTGGCAGTCAGTTTCAGGACTCCAACAATAGTCAACTGAGCAATGATGCCATCGAGGAGAGTGTTGCAGAACTATGCATAGCCCTTGAGCAGATTAGTGCTGGATGTAAGAATACAAGTGACATGGGGGGAAGTTCATCTGAACAAAAATCTGCTTTAGCACTTGCAAGTTCACAGCTGGAAGACATCTTCCACACAGAGAACCCGCTTAAACAAAGTACCATATCTGATGGAGGGGAAATTCCGCATCTGATGAAAGTCAACGATGCTCCCATGTATTTAGTGCCCACAGAAGTGGACCCACAGTTTGCACAAAATTTGCAAGACTTGCTCCTGGAGGGCACTGCATTGCTACCCACCTATGAGAAACCTGAAATATGCAAACATACTGCTTCTGAAGATGACAAAACTGCAGGATGGTTGGTAATCGCTAAAACAGGTCAAAATTTGCCAAATGGTCATGTAGCGGAAGATTCTCCATTGCAACATGGCAATACCAAAACACTAGCAGTAGTGAATTGTTTCCATGAAGATGCACAGCATGATGTGGGGAATACAGAAGCAATTGGCAGAAATTTGGATTTGCATGATCATACAGCTCATGCCATTGCCAACGAGGACCAAAGGTTTTCTGAGGACTCTTTGGTGAAGATGCCAGGAAGTAGCAATGGAAACTTGGACAAGTCGAGCTGTTCTAGCACGAAAACAATCAGCTCTGTTATAGATGACGTTGCTGACTATGAAATACCATGGGAAGATCTTCATATTGGAGAGCGCATTGGTCTAGGTTCATATGGGGAAGTATATCATGCAGATTGGAATGGCACTGAAGTTGCAGTGAAGAAATTTCTTGACCAGGATTTATCGGGTGTTGCACTAGATCAATTCAAATGTGAAGTTGGGATCATGTCAAGGCTGAGGCATCCAAATGTAGTTCTGTTCTTGGGATATGTGACACAACCACCAAATCTTTCGATATTAACTGAATACCTTCCAAGAGGGAGCCTTTACCGCCTATTGCATAGGCCAAACAGTCAAATTGATGAAACACGAAGGCTAAAAATGGCATTGGATGTGGCAAAAGGGATGAACTACTTGCATGCTAGCCATCCTACTATTGTGCATCGTGACTTGAAATCCCCAAATCTTTTAGTGGATAAAAATTGGGTTGTTAAGGTGTCAGATTTTGGCATGTCAAGGTTGAAACATCACACTTTCCTGTCCTCTAAATCAACAGCTGGAACAGTAATATCCTTGATGCTCTGCCGGAGTGGATGGCACCAGAGGTTCTACGTAATGAGCCATCAAATGAGAAGTGTGACGTATACAGTTTTGGAGTAA
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| Protein seq | MSRMKHLLRKLHLSGGGGSGGGAAAAGAPSGEHHHRPRQHRRSSAQPPPLPPPPVVAAAAAAEAAPVMAPVAAPVAAAAAEPRGMGADATMTRLEEEYQVRLALAISASDHAGLVDADSVQIRAAERISLGGAAGDRGPMEALSARYWNHCVVNYDERLSDGFYDVCGAPMHPHFQAKFPSLTTLRAVPVGGDAAYVAVLVNRERDPALKRLEGRALAIAAQDRAEHGGVASPELVQKIANLVVDAMGGPVDDADEMNREWGVKSRALCLQRNSIVLPLGLLRIGLSRHRSLLFKVLADRVNLPCKLVKGIYYTGTDEGAINLVKIDFDSVEYIVDLMGAPGTLIPSDISGSQFQDSNNSQLSNDAIEESVAELCIALEQISAGCKNTSDMGGSSSEQKSALALASSQLEDIFHTENPLKQSTISDGGEIPHLMKVNDAPMYLVPTEVDPQFAQNLQDLLLEGTALLPTYEKPEICKHTASEDDKTAGWLVIAKTGQNLPNGHVAEDSPLQHGNTKTLAVVNCFHEDAQHDVGNTEAIGRNLDLHDHTAHAIANEDQRFSEDSLVKMPGSSNGNLDKSSCSSTKTISSVIDDVADYEIPWEDLHIGERIGLGSYGEVYHADWNGTEVAVKKFLDQDLSGVALDQFKCEVGIMSRLRHPNVVLFLGYVTQPPNLSILTEYLPRGSLYRLLHRPNSQIDETRRLKMALDVAKGMNYLHASHPTIVHRDLKSPNLLVDKNWVVKVSDFGMSRLKHHTFLSSKSTAGTVISLMLCRSGWHQRFYVMSHQMRSVTYTVLE
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0220700 | OsNip_02t0220700-02 | Chr02 | 6726353 | 6733548 | - | IsoSeq | ||
| CDS seq | ATGTTGAAGCTTTGTGGAGATGTATTCGCAGTCTCTGCATGCAGGATGGATGTGCATGGACGAAGGTTCTATGCATCCTGTTGTGAAAAAAAAAATGTGACAAAACTCTCTCTGAAGCCGTGCAAAGGCGCTGCTGGAGAAAGCAATAGTGTGTTAGTTCCAAGTGAAGAAATGTGGTGCAACACGAAGTGCTCTGTGCCA
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| Protein seq | MLKLCGDVFAVSACRMDVHGRRFYASCCEKKNVTKLSLKPCKGAAGESNSVLVPSEEMWCNTKCSVP |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr02 | 6727473 | 6728002 | - | OsNip_02t0220700-01 | OsNip_02t0220700-02,OsNip_02t0220700-01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.845850 | 2.028506 | 5.660825 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0574200 | SBH | 1.088410 | 0.907139 | 1.006503 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g12810 | RBH | 2.554875 | 1.483327 | 1.560860 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0220700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0009140 | RBH | 0.914263 | 22.484032 | 7.433098 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0009240 | RBH | 0.615756 | 8.564253 | 5.035560 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0009090 | RBH | 3.259526 | 20.323441 | 15.203474 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0008890 | RBH | 0.224520 | 0.698043 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0009040 | RBH | 10.101712 | 26.613604 | 25.808149 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0113200 | RBH | 5.0557015 | 46.4760435 | 21.9064475 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0008870 | RBH | 0.467424 | 1.403153 | 2.550524 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0116700 | RBH | 11.5568315 | 62.1811695 | 16.937806 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0009300 | RBH | 0.235896 | 0.544045 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0008950 | RBH | 0.678518 | 15.364170 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0009260 | RBH | 6.759301 | 27.956141 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0009240 | RBH | 1.210262 | 2.590934 | 2.209160 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0009000 | RBH | 0.608742 | 10.998768 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G009180 | RBH | 0.300098 | 4.893781 | 4.310050 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0009030 | RBH | 1.675523 | 66.778305 | 11.513476 |
