Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_02g0186500 | OGI:02014590 | 14/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr02:4808249-4817119 | ||||||||
| Gene Symbol | RLCK64, OsRLCK64, RLCK71, OsRLCK71 | ||||||||||
| DNA seq | GGGAACAACATGTTAACTTTGGATCAGCACCAGATATGCAGAATTTTACAAGCCATGGTACAACCATACCGAAAACAGATTGTAACAATTAACCATACACACAGATAAGTATATCTGTGAGATGACAAGGGAAGCACCCAAACCTGCCGGTAAACAAGGCATAAACACGCATGCAGAGGTAAACACACAATGCTCCACGGAAGGAAACCAATAACTCCTGCTGATGAATGACAGATAACTTATAATTCTATGCATCAAACTACCTAGCTGAAGGTACTGTCTCACTTGAATCAACTGCCTCGTCTATTGTATCTGCTTTTGAGTTCTTCTCTTCTGTGATGCAGTCTGAACTATCAGGATGAGACGAATGAGATGAGTCCTGGAAGGAGCTGGTCAGATCAGGCTTGAACATCTCATCATTCTCCAAGTTGGAAAGCTTCTCAGCAGATTCTCCCTTGAGCAGCTCAACGACTTCAGACATTATCGGCCTCTGTTCCTGTTTGTTCTGACTGCATGCAAGCCCAACAAGCACCATTCGCTTCAGTTCAGCCTCGACGAAGACATCCTTGAGCTTTGGATCAGCAATTTCCTTGAACTTTTTGTCACGGGCAAGTGGAAGTGCCCACTCCGTGATAGTTAGCTTCGTAGTGGGGTTTAGCTTCTCAACTGGCCTCTTTCCACTGGCAAGCTCTAGCAGCAGTACTCCAAAGCTGAAGACATCACAGCTTTCAGAGGCCTTCCCAAGCATGGCGTATTCCGGTGCAAGATAACCGAGTGTACCCTTCACCTTTGTAGTGACATGGGTTGCACCATCTGGAATGAGCTTTGCAAAACCAAAATCGGCAACCCGTGCTTGGAAATTCTTGTCCAACAGAACATTGCTTGACTTGATATCCCGATGAATGATATGTGGTGTCGCTTGGTGATGAAGATATCTGCATGGTAGAGAGAGATTTCAGATGTAAGATTACTTCTGCATGTACTGAAAGTTGTCATACTGTTACAGCATAATGAATATTTCATAAGGATGTAAAACATGCTTACGCAATCCCTTCTGCAGAATCAATAGCGATCTTCATTCTTCGTTCCCAACCAAGATGGCATTCAGCTGCATGCTGTCCATGAAGGTGGGAGTGCAAGCTCAGGTTTGGCATATAATCGTAGACTATCAGGCGTTCTTGGCCTTCGGCACAATAGCCACGTAAGCTCAACAGGCTCTTGTGTCTCACTGTCGCCAAAACCTCCACCTCAATTGCAAATTCAGTTTCAGCTTTGTTGCTCCAACTCTTGAGCCTTTTCACCGCAATCTGTCCCATGTAGTTAACAGAAGAAGCGTTAGGTTCTGGTTAAAGTGAACTACTTTTTCCTGATTTTGGATTAAACAGATAGAAGGTAAATAGTTCCAACATAATACTTATGATTTATGAAATGATGTTCAAAAACATACTTGTCAAAACGATAGTTTGAATTTGATATTGTAGGGGCTGTTCAGATTGATGCTATTTTCAACCATACCATTTTTTGGTAAAGCTGCCAAAAAAATGTCTATGTTTAGTTTGTTGTCAAATTTGGTAAATACATAAGAAATCCTGCCAAAATTTTAGCAATATTGTCATCTTAAATTTTGGCAACATTGCCATCTTGCTAAAATTTTGGCTACAATCTGAATAGGCCCGTATTTTTTTTTCAACCCAAAATGAAACACAACTCACCGGGATGTAGCAGTTTGGGGGTTATATCACCATGCAACAAACTAACAAGTACCAATGTAGAACAGTTTCATCATCTTCATAATAAATGTGCAACTGTCTGATGGAATAAGTCTTACGCTGTTGGTCTTCTTGTGCTAATTGGTCTTTGTGTTCTTTTTGCTTTTCAGTGCATCTTTCTTTTATGACAGCATCTCCTTTCACTTTTACTTTTTAGAGTAGCAAGCCAGCTATAAATATATATCCCAACCCCCCTCCCCTGCGTGATGGTATGGCACTTGTGAGAAATAAACAGAAAATTGCCCCAACTCTCCTTCTTGAGCTCCCCTCTGTCCTCAGTCGGCAGCAGGAACACCGGCTGTTCCTACTTATCCCTCTTCCCCTGCGCTGACGAGCAGCAGCTCCTCAAAGGCAGTCTCTTCCCCACGCAGCAGCCCCTAGTGGCGTGCCATGTCCGCAGGACAGTCTCAGCGCTTGGTCGCCTCGAGCGCGCGGCTCCGGCAGGAGGCCGAGTTCACCGCGGCAGAGGAACGCGAGCGAGTGGTGGTAGAGACCGCTGCGACGGCAGCGAGGGCGTCAAGGCTGGCGGCAGCAAAATTGGCAACGGTAAGGGCGGAAGTGGAAGCGGCGGCGGCGGCGGCACGACAGTAGCACCAACAGCTCTATCTCCGCCTACGGCAGCTCCGATGATGAGCTGACGAGGGAGGCAGCTCGTGAGCGGGCGGAGCAGTGGGCAGCTGCGCAACCCCACGCGCGCAATGGCGGCAGCTTAGATTGGCGGGGATGCATGTGGCGGCGGCGGCCCAGACGGGCGTGGACGCGGCGGCCCGGTTGGGTCGACGGAGATCGCAGCCGTTGCAAGTGGCATGGCTCTCCCTCACCGGACCGGTACCATGGTCACCACAGGATTTAGGCCGTCATCAGGGAAGTCGGCCCTGGCGGTGTGTGGCCTAAACCCTACCCTCACCAAGACCAACTACGTCGAGTGGGCCGTGGTGATGAGGATAAGGCTCCAGGTGCGACACATGTGGGAGCCAGTTCGGCACGGCGACGTCAACTACGACGAGGATCAACGGGCGCCCAGAAGCGGACTGCCAAGGAGGCCTGGGACGCCATCGCTGCGGCACGCATCGGAAGCGACCGCGCTCGCAAGTCCACATTGCAGGCACTTCGCAAGGAGTGGGAGAACCTGGCCTTCAAGCCAGGTGAGGATGTTGATGACTTTGCCCTCCGTCTCAACACTCTGCTGTAGAAGTTGGTGTCGTATGGCGACGACACCTACGATGAGGAGAGAGCCGTCAAGAAGCTCTTCCGCTGCATCCCAGAGAAGTACAAGCAGATTGCTCGCTCGATCGAGTCTCTGTTGGACCTCTCCACGATGTCGATCGAGGAGGCGATAGGTCGCCTCAAGGTCGTCGACAGCGACGAGCCACAGCCTCTCTCGAGGCTTATCACCATTGGCAGGAAGCTTCATCTCACTCGAGAGCAGTGGGAGGCCTGCCAGGGTGACGGGAAGAAGAGGGAGTCCTCTTCCTCGACAGGCCGCAAGCGCGGCAAGGGACACGTCCTGCGAGGACGCACCCAGGGTGGCGCCCGCGGAGGCGCCTAAGCCGGCGCGAGATGACGCCTGCCGCAACTATGGCAAGTTTGGCCATTGGGCCAAAGACTGCCGACAGCCACGACACGGCCAGGCCAACGTCGCACAGGTGGAGGAGGAGGAAGAGTCGGCTCTGCTCCTGGCACACGCAAGCATCGAGCTATCTCCAGCGGCACCGGCCGCAGCGGCTTTCCTCCAACTTGATGAGCCGAAGGTACGCGCCTTCCTCGGAGATGGCTCCAGCAACGACAAGACTGATGAGTGGTACCTCGATACCGGCGCCACCCATCACATGACTGACCGACGGGAGTTCTTCACCGAGCTTGACTCCAGCGTCTGAGGTTCCGTCAAGTTTGGGGGTCGGCTCCATCACCTTCACCGCCAAATCCCTGTGCTCACCGGAGTCTACTACATCCCCGCTTTGAGGAACTCTATCATCAGCGTGGGACAGCTGGATGAGAAAGATTCATGCTTGTTGGTCGAGCACGAAGTCATGAGGATTTGGGATTGCCGTCGTTGCCTTCTTGCCAAGGTAACCTAAGGCACCAATCGACTCTACGTCTTCAACGTGCAAGTGGCACAACCGGCCTGCCTCCACTTCGAGGCCCTGAAGCGGCTCAGTGCCAAGGAGATGGTGCGAGGCCTGCCGTGCCTTGACCACGTGAAGCAGCTCTGCGACGTCTGCGTGTTAACAAAGCAGAGGCGGCTCCCCTTTCCCCAGCAGATAAGCTTCCGAGCCAAGGAGCGGCTCGAGCTCGTGCACGGGGACTTGTGTGGCCCAGTGACACCGGCCACACCAGGAGGACGACGTTACTTCATGCTGCTCGTCGACGACCTCTCCCGCTTCATGTGGGTAATGGTTCTCGGCAGCAAGGGAGAGGTTGCGGACGCCATTAGGCGCGCGCAGGCTGCTGCGGAGGCGGACTGCGGCGGCGAATTCACGGCGGCTGAATTCGCATCGTACTGCGCTGATGAGTGCATTCAGCACCACTACTTCGCGCCGTACAGCCCGCAGCAGTACGGCGTCGTCGAGCGGCACAACCAGACGGTTGTAGGGATGGCTCGAGCACTCCTCAAGCAGAGGGGGATGCCGGCCGTTTTCTGGGGAGAGGCGGTGGTGACGGCTGTCTACATCCTCAACCGCTCGACTACCAAGGCCCGTACGAGGCTTGGCATGGGCGCAAGCCGGCGGTCTCCCACCTGCAGTTTTTCGGCTGCCTCACGTTCACCAAGGAGATCGGCCACATCGGCAAGCTCGACGACAGGAGCACCCCAGGGGTGTTCATCGGCTAAGCAGAGGGCTCGAAGGCCTACCGTATTCTCGACCCAGAGACACAGCGTATGCACACGGCGTGCGACGTAGTGTTCGACGAAAGACGAGGGTGGGCATAGGACAAGGCGGTGGACGACGGCTCGACTCCAACGTACGACTTCACTGTTGAGTACGTCCACTTCGAGGGAGCTGGGGGAGTAGGTAGCTCTTATTCACTGAGTGTGCCTACCTAGCCCCCGAGCCTCCACCGACTCCAGCAGCGACACGCTCTCGAGCTACGACTTCGGCTGCAATGAGTTCTTCGCTGACACCATCACAACCGGCGACCCCACGCACTCCAGCACCAACAGCCACCCCTCCGGGCACATCCACTCCGACGCCAGGTTGTGTCAAGCACAGCCCGGTGGAGTTCGCTACTCCGCTCTCTCACGACGAGGAGCGCATCGACGCATACCACGACAGTGAGCCGCTGCGGTACCGTACGACGGGAGCCTCAGTCTTTCGCAGAGGCCGAGAGACACGCAGCATGGCGTGCCGTGATGTAGTCGGAGATGGACGCGGTTGAGGAAAACCGCACCTGGGAGCTTGTTAACCTCCCTCGTGGTCACCGCGCGATCACCCTTAAGTGGGTGTTCAAGCTGAAGAGGGATGAAGCCGGAGCCATCGTCAAGCACAAGGCTCGCTTGGTGGCACGCGGTTTCGTGCAGCAGGAGGGGATGCCTTCGCCCCCGTGGTGCGATCCCCGGCAAGGAGGGCAAGGTGCTCCTCCTTGCGCTGGCTGCTCAGGAAAGCTGGTGCGTTCATCACATGAACGTCAAGTCAGCGTTTCTGAACGACGACTTGAAGGAGGAGGTCTACGTACACCAGCCGCCAGGATTTGCGATCCCCGACAAGGAGGGCAAGGTGCTACTCCTGCACATGGCTCTCTATGGCTTGTGGCAGGCACCGAGGGCGTGGAATACCAAGTTGGATTCCACGCTCAAGGGGATGGGCTTCGAGCAAAGCCCGCACGAGGTAGCCATCAACCGGCTGGGCAATGGAGGAAATGTCCTGCTGGTGGGTGTCTACGTCGACAACTTGGTAATTACCGGCACCAAGGATGCGGAGGTGGCGGCGTTCAAGGAAGAGATGAAGGCCACCTTCCAGATGAGTGACCTAGGGCCTCTCTTCTTCTACCTAGGGATCGAGGTGCACCAGGACGACTCCGGGATCACGTTTCGATAGACCGCCTACGCCAAGCGCATCGTTGAGCTGGCTGGGCTCACCGATTGCAACCCAGCTCTTACTCCGATGGAGGAGAGACTGAAGCTGAGCCGCGACAGCAGGACAGAGGAGGTGGACTCTATGCAGTATGGGTGTCTTGTGGGGAGCCTTCGCTAGGCTCCCCACACACGGCCGAACTTGGCATTCTCCATCGGCTACGTTAGTCGGTTCATGCAGCGACCGACGATGGAGCACTAGCAGGCTGTGAAGAGGATCATCCGCTACGTTGCGGGGACTCTCGACCACGGTCTCTACTACCCGAGGTGTCCTAGAAAGGCACACTTCGTCGGGTATAGCAACAGCGACCATGCCGGTGACATCGACAGCGACCACGCCGGCGACATCGACACCAGCAAGAGCACAAGCGAGATTCTCCTCTTCCTCGGCAAGTGCCTCGTTAACTGGCATTCGGTCAAGCAGCAGGTGGTGACCCTGTCCAGCTACGAAGCGAGTACATAGCGGCCTCCAGCGCTTCGACCCGCTCTGGCTTGCGCGACTGCTTGGTGATCTCTTCGGCAGAGACACTGGAGCGGTGGAGCTTAGGGTGGACAGCAAGTTCGCTCTGGCCCTAGCAAAGAACCCCATTTTTCACGAACGGAGCAAGCACATCCGGGTGAGGTACCACTTCATCCGAGGCTGTTTGGAGGAAGGAAGCATCAAGGCGAGCTACATCAACACCACACCAAGGACTAGCTTGCGGACCTGCTCACCAAGCCCCTTAGGAGGATCAAGTTCCTTGAGCTTTGTTCTAGGATCGGGATGGCCCAACTTTCCCACAAGACGACGCACAAGACTTAGGAGGAGAATGATGAAATAAGTCTTGCGTTGTTGGTCTTCTTGTGCTGATTGGTTTTGTGTTCTTTTTGCTTTTCAGCTTTTAGGACAGGACTAGCATCTTTCAGTTTGGGATGCCTGTTAGGACAGCATCTCCTTTCACTTTTTAGATTAGCAAGCCAGCTGTAAATATGTATCCCAACCCCCCGGATGGTATGGCATTTGTGAGAAATAAACAGAAAATTGTCCCAACTCTCTTAGCGCCATCCTCTCGATAAGAGTAAGGATTCTGTTACTAACACTATCATTATAATAGTATTTAGTATATTTTTCTTTCATGTGTTTAATCACGTAAACAAGATTAATCCATAAAAAAGACTATAGCTATCAAGTATTTTACACGTTACAGGACAAAATCTTGCCTCATCTTTCACCCAAATATCACTATCAGCATGCTACTTATTTTTTCTGGCTCCTAGTAGACTAGGTGGGACAAATACACTGAAGAGAAGCACAATAGTCATCTGTCTTTGTGAAGACAATGTGATTTTCAATAGCCTCATATTCCGGCTGTATGCTTTCTTTTGTGTTCATACCTTCCAATTATGATTTTTTCTAGCTTGTAATCATGCAATCCTTGACAAGACTATTGGTATAAGCGAAAAAAATTGATAACTGAAGCTAAGAATAAGTCAGTTGTCTACTCAGACCAAATCCCCATTAGACACGGCCTTAAACCGCACGCAGGTCCAGTTTGGATGGCCATCATGTTCAAAGAATATCTGAAGGTAGCTTTTAAAAAACGGCAACCATTTTATACTGCTAATTAATACCACTAGACTTTTTTTTTTCAAGACGACCTACACAAGACAAAAAAGTTTCTATTGATATAGCAGGAAAAAATTACAAGGTTACCACTAGACCATGAACAACGCTAGAAGTGGATGTCAGTTAAACAACAATCATCAACATCACTGGGTCCCTCCAATGCTTTGCCATTTTTCTAATCAATTAGAAAAAAAAAAGAAGACAACAAACTAAAGTTTGTGCAGTGTGGACTGCATGATTCTCAGATTTCTTCCTGTTCTTTTTTTCTTTTTCAAGATTGAAAGAGGAACACCTCACCTGTGATCCATCCCAGAGCTGGCCCCAGTAGACGCTGCCAAACCCACCCTCACCAAGCTTGTTGTCATAGTTGAAATTGTTCGTCGCTGACTGTAGCTCCTTCAGCGAGAAGATCCGCCATGTCGTCTCCTTCTTCTTCTTCCTCCGGCCAGGTAGAACCCTGAGTATAGAACAAGCAAACAGATCAACAAACGAGCTTCATTTCCTCTTCAAACTCTCAAGTACGGACTCTTCTTCCCAAAAAAAAGAATTGGCACATTTTTAACGGATTAATTAGATATAAGTTTCCACTATGTCATTCTATTTCAGCTTGCTGACCAACAACTGCAATCCGAGAGCGAACAGAAAAATTCCCCAATACAAGCAGAGAAAATTCCACGCATCATTTGGTTCATCCATCCAATGAAAACAGGTGAATGTTGCGGTGTTGTATGCTCGCATGATTAATCAGCAAATCACACACAAAACCACAAAACTTGATCAGCAACTCACCATTTCCCCAAACAAAAACCATTTTCTGCTTCAAGACACTTCTCAGCTCCCAGCAGAAAAAATTCTCCCCAGAAAAAAAAAGTTCTTCTTAGCTAATCAATCGAGTAATCTGTTTTGAGCAAACCCATCGAATCCACCAACAGAACTAATCACAAACAAAATTGCAAATGTTTACCGACGATTCCACCCAACAAGTCAAAACCACCCCCACCCTCGTAAGTCATAACCCACCCAAATGAGCAAATCTCCCCTCTCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAACACACCAAACAGGCAAACAGCACACACGAATCAATCCTCAAATCGCCAGATATGCACTCACCCGTCCACCCCCTTGCAGCAGGAAGCCCACCCCATCGCCGCCGACACCGCCGCAGCCCCCCAAATCAGCACGACACCCCTCCCTCTCCGGAGACCTCCCGCCGCGCGAGGCAGCCCCGCTTCCTCCCCTCACCGCCGCCGGCGACCGCGAGACAGCTGGTTGAGGAGAGAGAGAGAGGAGAAGACGAGGAGACCCGCGGCTTCCTCCTCTCGTGGTGGTGGTGGTGGTGGTGGTGTCGGCTCGTCTTCTCCACCTCGCACTACTCGCGTCGTCTCGTCACCGCGCGGCGC
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| CDS seq | ATGGGGTGGGCTTCCTGCTGCAAGGGGGTGGACGGGGTTCTACCTGGCCGGAGGAAGAAGAAGAAGGAGACGACATGGCGGATCTTCTCGCTGAAGGAGCTACAGTCAGCGACGAACAATTTCAACTATGACAACAAGCTTGGTGAGGGTGGGTTTGGCAGCGTCTACTGGGGCCAGCTCTGGGATGGATCACAGATTGCGGTGAAAAGGCTCAAGAGTTGGAGCAACAAAGCTGAAACTGAATTTGCAATTGAGGTGGAGGTTTTGGCGACAGTGAGACACAAGAGCCTGTTGAGCTTACGTGGCTATTGTGCCGAAGGCCAAGAACGCCTGATAGTCTACGATTATATGCCAAACCTGAGCTTGCACTCCCACCTTCATGGACAGCATGCAGCTGAATGCCATCTTGGTTGGGAACGAAGAATGAAGATCGCTATTGATTCTGCAGAAGGGATTGCATATCTTCATCACCAAGCGACACCACATATCATTCATCGGGATATCAAGTCAAGCAATGTTCTGTTGGACAAGAATTTCCAAGCACGGGTTGCCGATTTTGGTTTTGCAAAGCTCATTCCAGATGGTGCAACCCATGTCACTACAAAGGTGAAGGGTACACTCGGTTATCTTGCACCGGAATACGCCATGCTTGGGAAGGCCTCTGAAAGCTGTGATGTCTTCAGCTTTGGAGTACTGCTGCTAGAGCTTGCCAGTGGAAAGAGGCCAGTTGAGAAGCTAAACCCCACTACGAAGCTAACTATCACGGAGTGGGCACTTCCACTTGCCCGTGACAAAAAGTTCAAGGAAATTGCTGATCCAAAGCTCAAGGATGTCTTCGTCGAGGCTGAACTGAAGCGAATGGTGCTTGTTGGGCTTGCATGCAGTCAGAACAAACAGGAACAGAGGCCGATAATGTCTGAAGTCGTTGAGCTGCTCAAGGGAGAATCTGCTGAGAAGCTTTCCAACTTGGAGAATGATGAGATGTTCAAGCCTGATCTGACCAGCTCCTTCCAGGACTCATCTCATTCGTCTCATCCTGATAGTTCAGACTGCATCACAGAAGAGAAGAACTCAAAAGCAGATACAATAGACGAGGCAGTTGATTCAAGTGAGACAGTACCTTCAGCTAGGTAG
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| Protein seq | MGWASCCKGVDGVLPGRRKKKKETTWRIFSLKELQSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKSWSNKAETEFAIEVEVLATVRHKSLLSLRGYCAEGQERLIVYDYMPNLSLHSHLHGQHAAECHLGWERRMKIAIDSAEGIAYLHHQATPHIIHRDIKSSNVLLDKNFQARVADFGFAKLIPDGATHVTTKVKGTLGYLAPEYAMLGKASESCDVFSFGVLLLELASGKRPVEKLNPTTKLTITEWALPLARDKKFKEIADPKLKDVFVEAELKRMVLVGLACSQNKQEQRPIMSEVVELLKGESAEKLSNLENDEMFKPDLTSSFQDSSHSSHPDSSDCITEEKNSKADTIDEAVDSSETVPSAR |
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| Function | PTI1-like tyrosine-protein kinase At3g15890 [UniProtKB/Swiss-Prot:Q9LSC2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0186500 | OsNip_02t0186500-02 | Chr02 | 4808249 | 4817094 | - | RAP2018-11-26 | ||
| CDS seq | ATGGGGTGGGCTTCCTGCTGCAAGGGGGTGGACGGGGTTCTACCTGGCCGGAGGAAGAAGAAGAAGGAGACGACATGGCGGATCTTCTCGCTGAAGGAGCTACAGTCAGCGACGAACAATTTCAACTATGACAACAAGCTTGGTGAGGGTGGGTTTGGCAGCGTCTACTGGGGCCAGCTCTGGGATGGATCACAGATTGCGGTGAAAAGGCTCAAGAGTTGGAGCAACAAAGCTGAAACTGAATTTGCAATTGAGGTGGAGGTTTTGGCGACAGTGAGACACAAGAGCCTGTTGAGCTTACGTGGCTATTGTGCCGAAGGCCAAGAACGCCTGATAGTCTACGATTATATGCCAAACCTGAGCTTGCACTCCCACCTTCATGGACAGCATGCAGCTGAATGCCATCTTGGTTGGGAACGAAGAATGAAGATCGCTATTGATTCTGCAGAAGGGATTGCATATCTTCATCACCAAGCGACACCACATATCATTCATCGGGATATCAAGTCAAGCAATGTTCTGTTGGACAAGAATTTCCAAGCACGGGTTGCCGATTTTGGTTTTGCAAAGCTCATTCCAGATGGTGCAACCCATGTCACTACAAAGGTGAAGGGTACACTCGGTTATCTTGCACCGGAATACGCCATGCTTGGGAAGGCCTCTGAAAGCTGTGATGTCTTCAGCTTTGGAGTACTGCTGCTAGAGCTTGCCAGTGGAAAGAGGCCAGTTGAGAAGCTAAACCCCACTACGAAGCTAACTATCACGGAGTGGGCACTTCCACTTGCCCGTGACAAAAAGTTCAAGGAAATTGCTGATCCAAAGCTCAAGGATGTCTTCGTCGAGGCTGAACTGAAGCGAATGGTGCTTGTTGGGCTTGCATGCAGTCAGAACAAACAGGAACAGAGGCCGATAATGTCTGAAGTCGTTGAGCTGCTCAAGGGAGAATCTGCTGAGAAGCTTTCCAACTTGGAGAATGATGAGATGTTCAAGCCTGATCTGACCAGCTCCTTCCAGGACTCATCTCATTCGTCTCATCCTGATAGTTCAGACTGCATCACAGAAGAGAAGAACTCAAAAGCAGATACAATAGACGAGGCAGTTGATTCAAGTGAGACAGTACCTTCAGCTAGGTAG
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| Protein seq | MGWASCCKGVDGVLPGRRKKKKETTWRIFSLKELQSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKSWSNKAETEFAIEVEVLATVRHKSLLSLRGYCAEGQERLIVYDYMPNLSLHSHLHGQHAAECHLGWERRMKIAIDSAEGIAYLHHQATPHIIHRDIKSSNVLLDKNFQARVADFGFAKLIPDGATHVTTKVKGTLGYLAPEYAMLGKASESCDVFSFGVLLLELASGKRPVEKLNPTTKLTITEWALPLARDKKFKEIADPKLKDVFVEAELKRMVLVGLACSQNKQEQRPIMSEVVELLKGESAEKLSNLENDEMFKPDLTSSFQDSSHSSHPDSSDCITEEKNSKADTIDEAVDSSETVPSAR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0186500 | OsNip_02t0186500-01 | Chr02 | 4808249 | 4817119 | - | RAP2018-11-26 | ||
| CDS seq | ATGGGGTGGGCTTCCTGCTGCAAGGGGGTGGACGGGGTTCTACCTGGCCGGAGGAAGAAGAAGAAGGAGACGACATGGCGGATCTTCTCGCTGAAGGAGCTACAGTCAGCGACGAACAATTTCAACTATGACAACAAGCTTGGTGAGGGTGGGTTTGGCAGCGTCTACTGGGGCCAGCTCTGGGATGGATCACAGATTGCGGTGAAAAGGCTCAAGAGTTGGAGCAACAAAGCTGAAACTGAATTTGCAATTGAGGTGGAGGTTTTGGCGACAGTGAGACACAAGAGCCTGTTGAGCTTACGTGGCTATTGTGCCGAAGGCCAAGAACGCCTGATAGTCTACGATTATATGCCAAACCTGAGCTTGCACTCCCACCTTCATGGACAGCATGCAGCTGAATGCCATCTTGGTTGGGAACGAAGAATGAAGATCGCTATTGATTCTGCAGAAGGGATTGCATATCTTCATCACCAAGCGACACCACATATCATTCATCGGGATATCAAGTCAAGCAATGTTCTGTTGGACAAGAATTTCCAAGCACGGGTTGCCGATTTTGGTTTTGCAAAGCTCATTCCAGATGGTGCAACCCATGTCACTACAAAGGTGAAGGGTACACTCGGTTATCTTGCACCGGAATACGCCATGCTTGGGAAGGCCTCTGAAAGCTGTGATGTCTTCAGCTTTGGAGTACTGCTGCTAGAGCTTGCCAGTGGAAAGAGGCCAGTTGAGAAGCTAAACCCCACTACGAAGCTAACTATCACGGAGTGGGCACTTCCACTTGCCCGTGACAAAAAGTTCAAGGAAATTGCTGATCCAAAGCTCAAGGATGTCTTCGTCGAGGCTGAACTGAAGCGAATGGTGCTTGTTGGGCTTGCATGCAGTCAGAACAAACAGGAACAGAGGCCGATAATGTCTGAAGTCGTTGAGCTGCTCAAGGGAGAATCTGCTGAGAAGCTTTCCAACTTGGAGAATGATGAGATGTTCAAGCCTGATCTGACCAGCTCCTTCCAGGACTCATCTCATTCGTCTCATCCTGATAGTTCAGACTGCATCACAGAAGAGAAGAACTCAAAAGCAGATACAATAGACGAGGCAGTTGATTCAAGTGAGACAGTACCTTCAGCTAGGTAG
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| Protein seq | MGWASCCKGVDGVLPGRRKKKKETTWRIFSLKELQSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKSWSNKAETEFAIEVEVLATVRHKSLLSLRGYCAEGQERLIVYDYMPNLSLHSHLHGQHAAECHLGWERRMKIAIDSAEGIAYLHHQATPHIIHRDIKSSNVLLDKNFQARVADFGFAKLIPDGATHVTTKVKGTLGYLAPEYAMLGKASESCDVFSFGVLLLELASGKRPVEKLNPTTKLTITEWALPLARDKKFKEIADPKLKDVFVEAELKRMVLVGLACSQNKQEQRPIMSEVVELLKGESAEKLSNLENDEMFKPDLTSSFQDSSHSSHPDSSDCITEEKNSKADTIDEAVDSSETVPSAR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.962376 | 0.757622 | 3.604069 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g09359 | RBH | 0.644939 | 0.504968 | 0.919389 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0186500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0006530 | RBH | 0.232102 | 37.224957 | 13.029906 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0006680 | RBH | 0.077696 | 13.752176 | 2.831769 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0006450 | RBH | 0.514535 | 60.379925 | 12.512751 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0006410 | RBH | 0.043644 | 1.317579 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0006460 | RBH | 1.128718 | 18.151794 | 27.724253 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0128200 | SBH | 6.857015 | 15.16552 | 21.7798425 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0006400 | RBH | 0.0 | 2.647102 | 1.880217 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0131900 | SBH | 5.8494675 | 17.3226815 | 21.220208 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0006840 | RBH | 0.070678 | 0.223089 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0006410 | RBH | 0.0 | 12.452258 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0006700 | RBH | 4.606554 | 16.936317 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0006700 | RBH | 0.225239 | 3.178912 | 1.913172 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0006450 | RBH | 0.216768 | 45.047016 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G006570 | RBH | 0.000000 | 8.429834 | 4.974110 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0006550 | RBH | 0.198622 | 37.790985 | 13.290949 |
