Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_01g0957600 | OGI:01123680 | 10/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr01:42207009-42208510 | ||||||||
| Gene Symbol | CYP71AA3, OsCYP71AA3 | ||||||||||
| DNA seq | CGATCCCTGCGTGCAACGAAGCGGGTGCATCAGAAGCTCCATCAAATCACGGATACGATAATCCAAGGACATGAAATCATCAAGGACGGCAGCGTTGGTGATGACACCATACAAGAAACAGTAGGAACACACAATATGCATGGGCATGGCCATAAGTGTGAGGACATCCTTGACGTCCTGCTGCGATTTCATAGGGACGGTGGGCTTGGGATCACCCTCACTAAAGAAATTGTCAGCGCCGTGTTGTTTGTAAGTACTCCCTCTGTTCCAAAATATAAGCATTATAGCATAATAACGAGTCAAATATTTTTAACTTTGACCATTAATAGAAAAAAATAAAAAAGATCAATCACGTAAAATTAATGTTACTAGATTTATCATTAAAGAAACTATCATATATGTAATTTTTTTTATTTAAAATATCTTATTTTATAGATATTGTTAGTCAAATTAGTATCTCGGAGACCGTGTCAGAGTCCATAAATCCTTATATTTTGGGACGGAGGGAGTACTCAAATTCAAACTTATGCTCAACCTCCATTCCTACAATTACTTGTGTCGTGCTATGTGGTAATGGATCATATACGTAATATCTCTAGGAGAATATGGTTGTAGTCCCACTGGCTAAGAATATTTGATTATTTGATTGATGTTTAGTACAAGATTTAGTCGTCAAATACTTTTCACTAGAGGGAGTATGCATCATAATTACAAAGTTTATGGAGTATTTTTTTTAAGAAAGTGTAAATTTGAATTTATCAGGATCTTTTCGCTGCTGGCTCAGAGACTACATCTACAACAATAATTTGGGCCATGTCCGAACTCGTAAGGACTCCCCATGTGATGGAGCGAGCACAATCTGAGATTCGTCAAGTCCTTCAAGGTAAAACCGTGGTTAGTGAAGCCGACATCGAAGGCCGACTCCATTATCTACAACTGGTTATAAGAGAGACTCTTAGGTTGCATCCTCCGGTACCATTTCTCATACCGAGGTTATGCTCTGAAGCAAATAGTAAGATCATGAGATATAATATACCTCAGGGTGCTATGGTGTTAGTGAACATATCAGCGATTGGCAGAGATGAGAAGATTTGGAAAAACGCAAATGAGTTTAGGCCCGAAAGATTTAAAGATGATATGGTTGATTTTAGTGGTACCGACTTTAGATTTATTCCTGGCGGTGCTGGACGAAGAATGTGCCCAGGTTTAACGTTTGGACTATCCAATATTGAGATAGCTCTCGCGAGCCTTCTTTACCACTTTGATTGGAAATTGCCCAATGACGCAAGCTCATGTAAGCTAGATATGAGAGAAACGCATGGAGTCACAGCACGTCGTCGAACTGAGCTTTTACTCAAAGCTACTCCTTTGTACACATAATTGGATTGGTCCATAAAAAATTCATGTACGCTGTGAAGACGAAGAATTGGTCTCTTAATAAACCATTGCCAATTAATGTTTGCCTAAATTTGTTTCTATCAGAACTGAAGGATAATTCATGT
More
|
||||||||||
| CDS seq | CGATCCCTGCGTGCAACGAAGCGGGTGCATCAGAAGCTCCATCAAATCACGGATACGATAATCCAAGGACATGAAATCATCAAGGACGGCAGCGTTGGTGATGACACCATACAAGAAACAGTAGGAACACACAATATGCATGGGCATGGCCATAAGTGTGAGGACATCCTTGACGTCCTGCTGCGATTTCATAGGGACGGTGGGCTTGGGATCACCCTCACTAAAGAAATTGTCAGCGCCGTGTTGTTTGATCTTTTCGCTGCTGGCTCAGAGACTACATCTACAACAATAATTTGGGCCATGTCCGAACTCGTAAGGACTCCCCATGTGATGGAGCGAGCACAATCTGAGATTCGTCAAGTCCTTCAAGGTAAAACCGTGGTTAGTGAAGCCGACATCGAAGGCCGACTCCATTATCTACAACTGGTTATAAGAGAGACTCTTAGGTTGCATCCTCCGGTACCATTTCTCATACCGAGGTTATGCTCTGAAGCAAATAGTAAGATCATGAGATATAATATACCTCAGGGTGCTATGGTGTTAGTGAACATATCAGCGATTGGCAGAGATGAGAAGATTTGGAAAAACGCAAATGAGTTTAGGCCCGAAAGATTTAAAGATGATATGGTTGATTTTAGTGGTACCGACTTTAGATTTATTCCTGGCGGTGCTGGACGAAGAATGTGCCCAGGTTTAACGTTTGGACTATCCAATATTGAGATAGCTCTCGCGAGCCTTCTTTACCACTTTGATTGGAAATTGCCCAATGACGCAAGCTCATGTAAGCTAGATATGAGAGAAACGCATGGAGTCACAGCACGTCGTCGAACTGAGCTTTTACTCAAAGCTACTCCTTTGTACACATAA
More
|
||||||||||
| Protein seq | RSLRATKRVHQKLHQITDTIIQGHEIIKDGSVGDDTIQETVGTHNMHGHGHKCEDILDVLLRFHRDGGLGITLTKEIVSAVLFDLFAAGSETTSTTIIWAMSELVRTPHVMERAQSEIRQVLQGKTVVSEADIEGRLHYLQLVIRETLRLHPPVPFLIPRLCSEANSKIMRYNIPQGAMVLVNISAIGRDEKIWKNANEFRPERFKDDMVDFSGTDFRFIPGGAGRRMCPGLTFGLSNIEIALASLLYHFDWKLPNDASSCKLDMRETHGVTARRRTELLLKATPLYT |
||||||||||
| Function | Premnaspirodiene oxygenase [UniProtKB/Swiss-Prot:A6YIH8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_01g0957600 | OsNip_01t0957600-01 | Chr01 | 42207009 | 42208510 | + | RAP2018-11-26 | ||
| CDS seq | CGATCCCTGCGTGCAACGAAGCGGGTGCATCAGAAGCTCCATCAAATCACGGATACGATAATCCAAGGACATGAAATCATCAAGGACGGCAGCGTTGGTGATGACACCATACAAGAAACAGTAGGAACACACAATATGCATGGGCATGGCCATAAGTGTGAGGACATCCTTGACGTCCTGCTGCGATTTCATAGGGACGGTGGGCTTGGGATCACCCTCACTAAAGAAATTGTCAGCGCCGTGTTGTTTGATCTTTTCGCTGCTGGCTCAGAGACTACATCTACAACAATAATTTGGGCCATGTCCGAACTCGTAAGGACTCCCCATGTGATGGAGCGAGCACAATCTGAGATTCGTCAAGTCCTTCAAGGTAAAACCGTGGTTAGTGAAGCCGACATCGAAGGCCGACTCCATTATCTACAACTGGTTATAAGAGAGACTCTTAGGTTGCATCCTCCGGTACCATTTCTCATACCGAGGTTATGCTCTGAAGCAAATAGTAAGATCATGAGATATAATATACCTCAGGGTGCTATGGTGTTAGTGAACATATCAGCGATTGGCAGAGATGAGAAGATTTGGAAAAACGCAAATGAGTTTAGGCCCGAAAGATTTAAAGATGATATGGTTGATTTTAGTGGTACCGACTTTAGATTTATTCCTGGCGGTGCTGGACGAAGAATGTGCCCAGGTTTAACGTTTGGACTATCCAATATTGAGATAGCTCTCGCGAGCCTTCTTTACCACTTTGATTGGAAATTGCCCAATGACGCAAGCTCATGTAAGCTAGATATGAGAGAAACGCATGGAGTCACAGCACGTCGTCGAACTGAGCTTTTACTCAAAGCTACTCCTTTGTACACATAA
More
|
|||||||
| Protein seq | RSLRATKRVHQKLHQITDTIIQGHEIIKDGSVGDDTIQETVGTHNMHGHGHKCEDILDVLLRFHRDGGLGITLTKEIVSAVLFDLFAAGSETTSTTIIWAMSELVRTPHVMERAQSEIRQVLQGKTVVSEADIEGRLHYLQLVIRETLRLHPPVPFLIPRLCSEANSKIMRYNIPQGAMVLVNISAIGRDEKIWKNANEFRPERFKDDMVDFSGTDFRFIPGGAGRRMCPGLTFGLSNIEIALASLLYHFDWKLPNDASSCKLDMRETHGVTARRRTELLLKATPLYT
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0382500 | SBH | 0.386915 | 0.264528 | 0.017743 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g72740 | RBH | 0.0 | 0.0 | 0.090516 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0957600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0047610 | SBH | 0.0 | 24.023346 | 0.527100 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0047100 | SBH | 0.0 | 0.0 | 0.069794 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0047570 | RBH | 0.0 | 17.341972 | 0.377264 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0046980 | SBH | 0.0 | 0.095992 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0046500 | RBH | 0.0 | 2.951368 | 0.642173 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0691900 | SBH | 0.886317 | 0.359132 | 0.07681 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0046010 | SBH | 0.0 | 0.639762 | 0.306246 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0693400 | SBH | 0.2078075 | 0.033162 | 0.0100245 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0046600 | SBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0046440 | RBH | 0.0 | 1.854687 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0046770 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0046760 | SBH | 0.0 | 0.725812 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0046530 | SBH | 0.0 | 0.592594 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G046790 | RBH | 0.0 | 0.0 | 0.302950 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0037480 | SBH | 0.0 | 0.0 | 0.0 |
