Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_01g0862800 | OGI:01110740 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr01:37334397-37336207 | ||||||||
| Gene Symbol | NAC59, ONAC059, ONAC59, ENAC1 | ||||||||||
| DNA seq | AATAGCAATAGCGCCAAGACATACAGAGAAGCCACAGACGTCGAGGCAGCTAGCGCGCGGGGGAGGACAGGACACTGCAGCAAGTTGGCCGGTGATAAGCGCGCGAACTCGCTGGCAATATGGCCGACGGCGGCGGCCGCCGGGCTCCCGGGTTCCGCTTCTACCCGACGGAGGAGGAGCTGATATGCTTCTACCTCCGCAACAAGCTCGACGGCCTCCGCGACGACATCGAGCGCGTCATCCCCGTCTTCGACGTCTACTCCGTCGACCCGTTGCAGCTCTCAGGTACCAGCACACGCGTGTACGTGCATTGCGTTCGTCGTACGTCGCGCGAGCGCCGCGTCACCTGTATACACACACCTGCTGCAGAGATTCACCACGAGATGCTGGGCGGCGGCGGCGAGGAGGGGGAGCCGTGGTTCTACTTCTGCCCGCGGCAGGAGCGGGAGGCGCGGGGCGGCCGGCCGAGCCGGACCACGCCGTCCGGGTACTGGAAGGCGGCGGGCACCCCGGGGGTCGTCTACTCCGCCGACCGCCGGCCCATCGGGATGAAGAAGACCATGGTGTTCTACCGCGGCCGCGCGCCGTCGGGAACCAAGACCGCGTGGAAGATGAACGAGTACAGAGCATTCCACTACCCCGACGCCTCCTCCGCCTCCGCCTCCAGCGCCGGCGCCGCCGCGCCACCAAACCATCTTCCTCCGCAGGTGATTAATCAATACCTAAGTACACGTTGCTTTCTTTGCCGTTGCACATACTAGCCGCATACCTTGTCACGTCATCTATCGATCTCTCCGTATAAATCAGAAAGATATGGCCGGCGGGGGCAAACTACTTGTTTTGCAGGTCGTTCCCTTTTATTGGCGGCGGGTAAATATCCAAACTTGTATATTCTGAGTGGTTCTTGCCAAACTGCCAATGAACCGGGTGCTCCATCATAAAGCATTTGAACCACACGCGTTGATCCATACGCACCAGTGTATAACTATACAGTACATGCAAGTATGCAACTGGGCGAATGCATGATTCGTGACTCCGTCCGTATGCAACTTTTTAAATGGTTGCATGGTTGACGCACTGTTTATGATTTACTCATGTACGAAGACAATTAATTGACTTGTAATTAAGTACATTTGAAAACACGATCAATGACGACTAATTTGTCTTGTGGGCTTTCGCTGTTGCAGCTGAGGAGCGAGTTCAGCCTGTGTCGACTGTACACCAGATCGGGAGGCATCCGGCAATTCGATCGGCGGCCGCTAGCGGGTGGTGGTGATGAGAACCCGGGGCCATCCATGGCTGCCGCGGCGGCGTCACCCGAGGAAAACGACGGATCAGGAAGTTCCATGCAGCAACTGGAGCTGATGGATCAAGGTGGCGCCGTTGATCCGGATTGGGACCAGTGGGACGACTTGGCCACCTTGACCGCACTTCTGTACTGGCCTAGAGATTAGGGATGCCAATTGTTTACATGATCTTGCTCGTAGTGCTAACTGTGAAGTGCATGTTACACGTATCAACGACCAAGTGTAGTACATGCTTTTTTTTCTTTTGCCGCGCAAACTCTCCAGTATTAACATAAGAAAAAAAAAATCAGAACACACACAATTTTTTTTGGTTTCTCCAAATATATAATTAATTAATTATTGTTTTCTTCAGTTAATCATATTTTTCTAGTTGGATCTTCGCCCTTGGCCCTGTGGGATCTCCTCCAACTTTTCTGATAATAGGATTTGTTTATACTAGTTCATCCGTCACAAAATGTAAGGTATACATGTATTTTAGATGGTTTCATTAATACAATACTTCTT
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| CDS seq | ATGGCCGACGGCGGCGGCCGCCGGGCTCCCGGGTTCCGCTTCTACCCGACGGAGGAGGAGCTGATATGCTTCTACCTCCGCAACAAGCTCGACGGCCTCCGCGACGACATCGAGCGCGTCATCCCCGTCTTCGACGTCTACTCCGTCGACCCGTTGCAGCTCTCAGAGATTCACCACGAGATGCTGGGCGGCGGCGGCGAGGAGGGGGAGCCGTGGTTCTACTTCTGCCCGCGGCAGGAGCGGGAGGCGCGGGGCGGCCGGCCGAGCCGGACCACGCCGTCCGGGTACTGGAAGGCGGCGGGCACCCCGGGGGTCGTCTACTCCGCCGACCGCCGGCCCATCGGGATGAAGAAGACCATGGTGTTCTACCGCGGCCGCGCGCCGTCGGGAACCAAGACCGCGTGGAAGATGAACGAGTACAGAGCATTCCACTACCCCGACGCCTCCTCCGCCTCCGCCTCCAGCGCCGGCGCCGCCGCGCCACCAAACCATCTTCCTCCGCAGCTGAGGAGCGAGTTCAGCCTGTGTCGACTGTACACCAGATCGGGAGGCATCCGGCAATTCGATCGGCGGCCGCTAGCGGGTGGTGGTGATGAGAACCCGGGGCCATCCATGGCTGCCGCGGCGGCGTCACCCGAGGAAAACGACGGATCAGGAAGTTCCATGCAGCAACTGGAGCTGATGGATCAAGGTGGCGCCGTTGATCCGGATTGGGACCAGTGGGACGACTTGGCCACCTTGACCGCACTTCTGTACTGGCCTAGAGATTAG
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| Protein seq | MADGGGRRAPGFRFYPTEEELICFYLRNKLDGLRDDIERVIPVFDVYSVDPLQLSEIHHEMLGGGGEEGEPWFYFCPRQEREARGGRPSRTTPSGYWKAAGTPGVVYSADRRPIGMKKTMVFYRGRAPSGTKTAWKMNEYRAFHYPDASSASASSAGAAAPPNHLPPQLRSEFSLCRLYTRSGGIRQFDRRPLAGGGDENPGPSMAAAAASPEENDGSGSSMQQLELMDQGGAVDPDWDQWDDLATLTALLYWPRD |
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| Function | NAC domain-containing protein 90 [UniProtKB/Swiss-Prot:Q9FMR3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_01g0862800 | OsNip_01t0862800-01 | Chr01 | 37334397 | 37336207 | + | RAP2018-11-26 | ||
| CDS seq | ATGGCCGACGGCGGCGGCCGCCGGGCTCCCGGGTTCCGCTTCTACCCGACGGAGGAGGAGCTGATATGCTTCTACCTCCGCAACAAGCTCGACGGCCTCCGCGACGACATCGAGCGCGTCATCCCCGTCTTCGACGTCTACTCCGTCGACCCGTTGCAGCTCTCAGAGATTCACCACGAGATGCTGGGCGGCGGCGGCGAGGAGGGGGAGCCGTGGTTCTACTTCTGCCCGCGGCAGGAGCGGGAGGCGCGGGGCGGCCGGCCGAGCCGGACCACGCCGTCCGGGTACTGGAAGGCGGCGGGCACCCCGGGGGTCGTCTACTCCGCCGACCGCCGGCCCATCGGGATGAAGAAGACCATGGTGTTCTACCGCGGCCGCGCGCCGTCGGGAACCAAGACCGCGTGGAAGATGAACGAGTACAGAGCATTCCACTACCCCGACGCCTCCTCCGCCTCCGCCTCCAGCGCCGGCGCCGCCGCGCCACCAAACCATCTTCCTCCGCAGCTGAGGAGCGAGTTCAGCCTGTGTCGACTGTACACCAGATCGGGAGGCATCCGGCAATTCGATCGGCGGCCGCTAGCGGGTGGTGGTGATGAGAACCCGGGGCCATCCATGGCTGCCGCGGCGGCGTCACCCGAGGAAAACGACGGATCAGGAAGTTCCATGCAGCAACTGGAGCTGATGGATCAAGGTGGCGCCGTTGATCCGGATTGGGACCAGTGGGACGACTTGGCCACCTTGACCGCACTTCTGTACTGGCCTAGAGATTAG
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| Protein seq | MADGGGRRAPGFRFYPTEEELICFYLRNKLDGLRDDIERVIPVFDVYSVDPLQLSEIHHEMLGGGGEEGEPWFYFCPRQEREARGGRPSRTTPSGYWKAAGTPGVVYSADRRPIGMKKTMVFYRGRAPSGTKTAWKMNEYRAFHYPDASSASASSAGAAAPPNHLPPQLRSEFSLCRLYTRSGGIRQFDRRPLAGGGDENPGPSMAAAAASPEENDGSGSSMQQLELMDQGGAVDPDWDQWDDLATLTALLYWPRD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.179111 | 0.000000 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0442700 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g64310 | RBH | 0.226886 | 0.109463 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0862800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0041190 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0040730 | RBH | 0.0 | 0.677004 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0041100 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0040560 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0040130 | RBH | 0.0 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0613900 | RBH | 1.1914435 | 15.776261 | 2.1388865 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0039810 | RBH | 0.000000 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0613500 | RBH | 1.3091065 | 11.1226315 | 0.025953 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0040160 | RBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0040120 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0040360 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0040330 | RBH | 0.000000 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0040190 | RBH | 0.0 | 1.185666 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G040640 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0040330 | RBH | 0.0 | 0.0 | 0.692165 |
