Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_01g0854500 | OGI:01109480 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr01:36813736-36815023 | ||||||||
| Gene Symbol | QHB, OsWOX9, WOX9, WOX5, Os WOX5, OsWOX5, QHB/OsWOX9, OsQHB | ||||||||||
| DNA seq | GGAATATTAATTAATGGATATATCATATAGAAGTATCAGCAGTGACCATGTTAGTATCCATGTAGCAGAAAAGAAGAAAAGTAGAAGTACATCTCATGATGGAAAGACCAAGGAAAAGGGCAATGGGGAAATCTCGTTTGCGTGCTCTTTCCTGATCCTCCCAGATACTGCATGCAACAACGGACTTTCCCACAACACATGCCGTATCTCATGACATCTCGTACGTACTCCTTTTGATGTGGGGCAGCTAGAACTAGGACTAGGCACAGCGACAAGAGGCCAGGTACAGTCGCGGCAAGCTGCATCTCATGCCATATGTGCGGCACATCAATGCACGGGTCGATCTAGAGGCCGAAGCTGCAAAGCCTGAGCTCCAGCGGCGGATCCCGGCCGGCAGCGACGTCGAAGAACGAGATCTCCCTGCACTGCTCGCCACCGCCGCCCCTCACATACCGGACCTTGTCCACCTCGAGGTCATACGACTTGAGTGGGAACAGCTCCAGCGTTTCCACCTCCCTCGTCGGCCGCTCCCACATCGCTTCCGTCTCCACCACATCCCTCACGTAGCCTGCAAGCGCGGATCGAACAGCAACTTGATCAGCTATTCGATCATGGGTATTCATGCGTACGTATGCATGTATATAGGCGAAATAATTAATCAAAGTATGTATGCTTACATGTCATGAGCCGGTGATGATGGCCGTAGCTTCTGGCCTCCCGCTTGCTCTCAGGAGGCTGCAGGACGAGGTCGGCGTCGCCCTCGTGGGCTGCGGCGCGGCCATCGTCATCGTTGCTGCCGCTGTCGGGGGAGGAGGCGCCGCGGCGGCGCTTCTTGTGGTGGTGGCGCTCGCGGGCCTTGTGGTTCTGGAACCAGTAGAAGACGTTCTTGCTCTCCACCTTGCCGAATGCGCTGAGGTGAGTGGAGATGCGCTGGATCTGCTCCGTGCTCGGCGTCCGCAACCCCGCTCGGAACAGCTCCGTCAGGACCTTCACCTGCTCCGCCGTCGGGTTCCACCGCCCACACTTCACCCCCACTCGCCCGCTAAGAGCCTCCATGACCGACCGACTGATCGATCACTACCTATATATGTAGACAAACCAGATTTGATCCTGAGCTAGCTAGCTACCTTGTTTGATCGATCGATCGATCGAGCGGCTGGGAGCAGTAGAACTGCTTGAAAGCTAATTCACTGATCAAAACGGTCTAACGTAACTTGGCCTTGTGGTAGATAGGTTTAGCTTCTGATTTGGTCTCTTCCGGGATCTTCTTCTGATCAGAAGCAATGCT
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| CDS seq | ATGGAGGCTCTTAGCGGGCGAGTGGGGGTGAAGTGTGGGCGGTGGAACCCGACGGCGGAGCAGGTGAAGGTCCTGACGGAGCTGTTCCGAGCGGGGTTGCGGACGCCGAGCACGGAGCAGATCCAGCGCATCTCCACTCACCTCAGCGCATTCGGCAAGGTGGAGAGCAAGAACGTCTTCTACTGGTTCCAGAACCACAAGGCCCGCGAGCGCCACCACCACAAGAAGCGCCGCCGCGGCGCCTCCTCCCCCGACAGCGGCAGCAACGATGACGATGGCCGCGCCGCAGCCCACGAGGGCGACGCCGACCTCGTCCTGCAGCCTCCTGAGAGCAAGCGGGAGGCCAGAAGCTACGGCCATCATCACCGGCTCATGACATGCTACGTGAGGGATGTGGTGGAGACGGAAGCGATGTGGGAGCGGCCGACGAGGGAGGTGGAAACGCTGGAGCTGTTCCCACTCAAGTCGTATGACCTCGAGGTGGACAAGGTCCGGTATGTGAGGGGCGGCGGTGGCGAGCAGTGCAGGGAGATCTCGTTCTTCGACGTCGCTGCCGGCCGGGATCCGCCGCTGGAGCTCAGGCTTTGCAGCTTCGGCCTCTAG
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| Protein seq | MEALSGRVGVKCGRWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARERHHHKKRRRGASSPDSGSNDDDGRAAAHEGDADLVLQPPESKREARSYGHHHRLMTCYVRDVVETEAMWERPTREVETLELFPLKSYDLEVDKVRYVRGGGGEQCREISFFDVAAGRDPPLELRLCSFGL |
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| Function | WUSCHEL-related homeobox 9 [UniProtKB/Swiss-Prot:Q8W0F1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_01g0854500 | OsNip_01t0854500-01 | Chr01 | 36813736 | 36815023 | - | RAP2018-11-26 | ||
| CDS seq | ATGGAGGCTCTTAGCGGGCGAGTGGGGGTGAAGTGTGGGCGGTGGAACCCGACGGCGGAGCAGGTGAAGGTCCTGACGGAGCTGTTCCGAGCGGGGTTGCGGACGCCGAGCACGGAGCAGATCCAGCGCATCTCCACTCACCTCAGCGCATTCGGCAAGGTGGAGAGCAAGAACGTCTTCTACTGGTTCCAGAACCACAAGGCCCGCGAGCGCCACCACCACAAGAAGCGCCGCCGCGGCGCCTCCTCCCCCGACAGCGGCAGCAACGATGACGATGGCCGCGCCGCAGCCCACGAGGGCGACGCCGACCTCGTCCTGCAGCCTCCTGAGAGCAAGCGGGAGGCCAGAAGCTACGGCCATCATCACCGGCTCATGACATGCTACGTGAGGGATGTGGTGGAGACGGAAGCGATGTGGGAGCGGCCGACGAGGGAGGTGGAAACGCTGGAGCTGTTCCCACTCAAGTCGTATGACCTCGAGGTGGACAAGGTCCGGTATGTGAGGGGCGGCGGTGGCGAGCAGTGCAGGGAGATCTCGTTCTTCGACGTCGCTGCCGGCCGGGATCCGCCGCTGGAGCTCAGGCTTTGCAGCTTCGGCCTCTAG
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| Protein seq | MEALSGRVGVKCGRWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARERHHHKKRRRGASSPDSGSNDDDGRAAAHEGDADLVLQPPESKREARSYGHHHRLMTCYVRDVVETEAMWERPTREVETLELFPLKSYDLEVDKVRYVRGGGGEQCREISFFDVAAGRDPPLELRLCSFGL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g63510 | RBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0854500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0040670 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0040160 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0040550 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0040020 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0039610 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0607400 | RBH | 0.079035 | 0.6318195 | 0.106815 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0039290 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0606100 | RBH | 0 | 0.6331045 | 0.227943 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0039650 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0039590 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0039830 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0039800 | RBH | 0.0 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0039680 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G040130 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0039810 | RBH | 0.0 | 0.0 | 0.0 |
