Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_01g0782100 | OGI:01099280 | 13/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr01:33136787-33145647 | ||||||||
| Gene Symbol | PI37, Pi37(t), Pi37, PISH, Pi sh, Pish, Pi-sh, Pish(t) | ||||||||||
| DNA seq | GCCACTAGATTTTTTCCCGTCTCGTGCCATTGACTCGCGGTGCGACGAGACGAGCCACCGGGATCTCCCGCCGTTCGGAGACCTAGGGGAGCAAGGGGGAGACTAGAGAAGGTTGCGCTCCATGAAGTCATGGTGCACCTTAGGTATCTTGAAAGGTTTTACCAAGCGACCTGGTTATTGAAGCGTGGAGAAGAGGCTCCAGTGCGGCAGGAGAAAGCAGATGAGTAGAGGTACGATCTCTTCAGGAGAAAGCAGAGCCCAGCTGCCCAGGTGGTGGGGAGAGATTATCAAATTTTTCGGTGGTGGTTTGGCACGGGACTCTGCCGCTTCGCTGCCTTCAAGGCTCAAGCTCAGGGTGACTGGCGGCATCTGACAGGTTCATTTCCTCTTGCTTATGTCTTTTAGTTGCAAATCAATTACCATTGGTTGTGGGTTTGAATTATTGGGCGAAATGCTCATGCGTTGGTCTTGAAATTTAGCTTTTTATCTATCTCTATGTTTTACATTATAAGTCGCTTTAATTTTTTTCTAATTATTTTTTTAAGTTTGATCAAGTTCATATAAAAATGCAACAACATTTTCAACTCAAAACAAATATATTAATATAATATATTCAATGCTATATGTAATGAAACTAATTTAGTGTTATGAATGTTACTATATTTTTTTATAAAGTTGGTTAAATCTAAAAAGGTTTAATTAAAAAAAATCAAAACTACTTATAATACAAGTAAAATAGAGAGAATTGCATAGAAGTGGAAGTGTGTCGGTGTCTGTACTGGTTCTACTCACCTAGTCACCTCCCTGCCACTGCTATTCTGCTAATAGTGTTAGAGAATACGCACGCACAGATAATGGCAAGGACGTCATTTAGAAGAGCCCACTAGTGCGTGTCATGTTGCTTATGTGCAAATTTTATACACTTTCTTGACTGACCAAAGGTTGTATGCGGTCATTTTTTTTTTCTCTCGGTGCTAGCTTTAATATACGGAAAGCCGTTTAGAGAAGATGGCATGACAATAATGGAGCATATATATATAAACTAGCTCGTACCCTGCGGCGTTGCTGCGGGTAGATATTGTAATTGCAAGTGTCCAGAGAATAACAAATAAAATTTTCCATGGAACAATCATGATGGCCAAATTGTATAATATATGGCTGAAAGTTCACATTATCTAAAACAAATATTTTTCGCTGCGGTCGGAGTGTATATTAAGAAGGAGAGAGTTTAAGCAAACTGTACAAGAGAACAATCAGAGCCAAAGCTCACATACAGAACCAGGACACTGGTTCGCCACACACACATGGTTCAAACTTCAAACATTACTGGGAGTCTGATATACATTTCTTTCTTGTCTTCCTGCAAATTTGTGTTGGCACTAGCTTCATACAGACCTCAACTCTACTGATCCAAGAACAACATGTAGGGCTACATCCTACATGTATACCCAAATACCCAATACAAACACAAAATAGACGAAGCTACCCTGCAATGCAATCAGTAATAAGATCAATAGTTGATACCGAAGCCACCAGCCAGCATTTCGGGTAAACATAGAGCAACAATGAATATAAGCAAGTCTCTTAAGAATTACGTTCTCATTTTGATAAACTGGCAAGCACGGGTGAATTTTGCATCAACACCCAACGGAAATTTGATTAGCATTCCTTGAAATATGTCACTGTTGATGAAGGTAAAAAAGTAAACACAAAGTGAAGCCCATAGAGCTTCAGTTTAGTTCAGGCATCAACATAGTTTAACTCATGAACCTCCAAATTAAATAAATTATTTATTTCATTATTATATATCATACCTTGGTACATTTGTCAGCCTCACGGCAGTAGATTTTGCCCATGTTGCAGTAAGTTACACACACAAACACCAAATATGCTAGTTTTTAAACTATTCTTGTTTCACTAGATTTAATTGCATTTGGTTTTTTACTATGCTATTTCGGAGTTGTTTAATTTGATAGTGGGGGCCATAGAGTATAATGAAAAACAGCAAGGTAATGAGAACCAGAGCATAGTCCGGCTAGAATATTTTAGGAGTCCTTTTAATGAGGTCCAGCTTGTTAAGGGTAGTATGTCTAGGGGTATTTTAGATATTTCCCATCTCTCTCTTGTACAAATATATTTTGCCCTTTGGGCCTAATCTAATTGGAACAGTTCATTCTCCAATTTCTCCAAATTGTAACATGGTATCAGACCCTTGTTCCAAAAACCCTAGCCACCAAATCCGATCATCACCGGCGCACCGGCGGCGGTGAGCCGCCGGCGAGCCATCATCATCGTCCTCCTTCATCCCTCAACGTTTTTGTCTCCAAGCAGCAAGCCTGCAGTTCGTCGTCGTCACCGTGTTCCTGTTCGCCGGTCGCAGCCGCCGCCAGTTGCGGCGCCGCGCCCGTTCCCACTTCTCCACCCACGCAGCCACGCCGTCGTGGTGTTCATCCACGCTGCTCGTCGCGGGGCTCGTTCTTGCCGCCGTTCGAGAGCCGCCGCTGTGGCCTCGTCAATCTACATCAAGGCATCAAGCAACATCAGTTTTTGGCCCATTTCTTGTCAGTTAGCATCAGCAAACCATCGTCCTCTCTGATCTGCAGCAGCAACAACAACAACTCCCGTTCACCTCCTAGTAGATGCAGCAGCTAGCCCATTGTTGTCTCCTAATTTCAGCAGTAGAATTTCCATGTTCCATTGTTTGTGTTGCAACATGCATTCTGCAGATTGTCATCAAGCTTGTATTCCACCACATGTGTTAGTCAGTTTTTGCGCTTGCTAATCGCTGCCATCCACTACTCACTCATCAATCATCACCATGCTTTGTTATTGTTAGCTACTTATTATAATCCAATTTTACTTCTCCAAATTATCATGATGGCTTGTAGTAGTCACTGGTTAGGTCATTAGCTGCTTGCTTGCTACTGTCAACATGTTCACTAGCATCCTTTGTGTCTTTTGCTAGTAATGTGCATCTCTGCTTGCAGTCCATCTATCAATATTGCCTTTTTGCTATATCCATCAATCCGTGTTCTTTACTAATCAAATTCCTGTGTTTCCTACCGAGTCCAGCAAAATCCATTGCATATCCTTCATTTTGTCGAAGCTGTGCCAGTCCATCTCTTCATGGTCATTTCATCATCACCAGCTCCCCGTCGGAGCTGGCCTTCATTGTCACTTCATATCTTCATCATCTCCATGTCGGAGCTTGTCATCATCATCATCAATCAGTGAAGGTCCGAAGAACAGTTTGTGAAGGGCCTTCATCAATATCAATGTCTCATCATCAATCAAAGGACCGAAGAACAGCTTGTGAAGGTCCATTGTCATCATCATCAACATCTCCGAATCAATGAAGAGCCGAAGAACGATTCGTGAAGGCTTCAAGGTACCGAGGGCCGAAGAACAGTTTGTGAAGGCTCCGAGGTCCATTTCATTGAGGAGGGGGTCTTTTCTTCTTCATCATCCAAGAATTGACACACTTCGACGACATCATCAAGACTTTGGAGATAGGCTAATATTTAGATTGTGTTCTCATGTTTAGTTTACCTTTCAAATGCAATGTTATTACATACACATTGCATTTGAGTGGGGGTGTTAAGGGTAGTATGTCTAGGGGTATTTTAGATATTTCCCATCTCTCTCTTGTACAAATATATTTTGCCCTTTGGGCCTAATCTAATTGGAACAGTTCATTCCCCAATTTCTCCAAATTGTGACACAGCTCATCTGAATATTAGAGAAATATAAATTTGCCACTAACATTTAACAATGTCCCACTTGTCTACTCCCTCCGTCAAAAAAAACCAAACCTAAGACTTAGATGTGATATAATCTAGTATCTGTCTAGATTCGTTGTACTAGATTATGGCTTAAATACTAGATTAAGTTTTTTTTGGGACGGAGGGAGTATGTCTAACCAAAATAACACAATTGATTTGCATATTGTGTTTTGCCTCGCATTGTGCCGAAGCAATCTTATCTGTGGCAATTGGTAGAGTTCTTCCTCTCACACCTTCTCTGCAATACAAACGCATCTGGCTCTGGTAACCTTGCACTCCTCTCTTAGTATTTCTTTCCTTCACGCTTTCTTGTCTCTGCTTAAGTTCTCTATCGTTTGGTACCATCATGCATTAATTCCTTTTTCCTCTATTTCCCACTCCAAACATTTCCATAACCACTCACATACACAAAAATAAAAAACCAGACAGAGAGAAAAAAACTTGTTTTGGGAGTTCTGTTGTTATCTTCCTCACAGAAGAAAAATCTCTCCATCACCATCTGTTCTTATGCCCTGCTTCTATTCATTCACTTGTTCACAGCTGCAGTAGTGCTGTTCCATGGCGGAGGTGGTGTTGGCTGGCTTACGTTTGGCAGCAACACCAATCTGTGTGAAGCTCCTCTGTAATGCTTCGACGTGCCTTGGCGTGGACATGACGCGTGAGCTCCATGAACTGGAGACCATCATCATACCACAGTTCGAGCTGGTGATTGAAGCAGCTGAGAAAGGAAACCACAGAGCCAAGCTGGACAGATGGCTCCGGGAGCTCAAACAAGCCTTCTACAATGCTGAGGACCTTCTGGACGAGCATGAGTACAACATCCTTAAGTGCAAAGCGAAACACAAGGATTCTCTAGTGAAAGATTCCACCCAGGTTCATGACTCTTCCATCAGCAATATTTTGAAGCAGCCTATGCGTGCTGTGTCCAGTAGGATGTCCAATCTGCGCCCAGAGAACAGAAAGATACTTTGCCAGTTGAATGAACTGAAGACCATGCTGGAGAAAGCCAAGGAGTTCCGTGAGCTGATTCACTTACCTGCTGGTAATAGTCTTGAGGGTCCCAGTGTACCAACAATTGTTGTTCCTGTAGTGACATCGCTATTGCCGCCAAGAGTATTTGGTCGCAACATGGATCGCGATCGCATAATACATCTTCTTACTAAGCCAATGGCTACTGTTTCTAGCTCAGTCGGCTACTCTGGTTTGGCCATTGTTGCACATGGAGGAGCAGGAAAATCCACCTTAGCACAATGTGTTTACAATGACAAGAGGGTACAAGAACATTTTGACGTCAGGATATGGGTCTGCATCTCACGCAAACTTGATGTTCATCGCCATACACGTGAGATTATCGAGTCAGCAACAAATGGAGAGTGCCCTCGTGTGGACAATCTTGATACTCTCCAGTGCAGATTGAAGGACATAATGCAAAAATCAGAGAAATTCCTGCTTGTGTTGGATGACGTCTGGTTTGATGAATCCGTCAATGAGAGGGAATGGGACCAGTTGCTTGATCCTCTTGTTTCTCAGCAGGAGGGGAGCAGAGTTTTGGTGACTTCTAGACGAGATGTACTTCCAGCTGCTCTTCACTGTAAGGATGTTGTTCATTTGGAAAACATGGAAGATGCCGAGTTCTTGGCTCTATTCAAATACCATGCTTTCTCTGGAACAGAAATCAGAAATCCACAGTTGCATGCACGGCTAGAAGAGGTCGCAGAGAAGATTGCTAAAAGGTTAGGACAATCGCCTTTAGCAGCAAGGACAGTAGGCTCCCAGCTGAGCAGGAATAAGGATATTGCCATATGGAAAAGTGCTCTAAATATTGAAAACTTAAGTGAGCCCATGAAAGCTCTGTTGTGGAGTTATAATAAATTAGATTCACGTCTGCAGAGATGTTTTCTGTACTGCAGCTTATTTCCAAAAGGTCACAAGTATAAAATTGATGAGATGGTTGACCTTTGGGTGGCAGAGGGGCTAGTTGATTCACGCAACCAGGGGGATAAGAGAATTGAAGATATTGGCAGGGATTACTTCAATGAGATGGTGTCAGGATCTTTCTTTCAACCAGTTTCTGAAAGATATATGGGTACATGGTACATTATGCATGATCTGCTTCATGATTTGGCAGAGTCACTGACTAAAGAAGACTGCTTCAGATTAGAAGATGATGGGGTGAAAGAGATACCAGCCACTGTTCGACATCTATCTATTTGTGTTGACAGTATGAAATTCCATAAGCAAAAGATCTGCAAGCTACGTTATTTACGCACTGTTATCTGCATTGACCCTCTCATGGATGACGGAGATGATATTTTTAATCAGCTATTGAAGAATCTGAAGAAGCTACGTGTACTACATTTGTCGTTTTACAACAGTAGCAGCTTGCCTGAATGTATTGGTGAGCTGAAGCACCTTCGATATTTGAGTATCATCAGCACATTGATTTCTGAACTGCCAAGATCATTGTGTACTCTTTTCCACTTGGAGCTACTTCATTTGAATGACAAGGTCAAGAATTTGCCGGACAGACTCTGTAATTTAAGAAAGTTACGACGTCTTGAAGCATATGATGACAGAAACAGAATGTATAAATTGTATAGAGCAGCTCTCCCTCAAATTCCTTACATAGGCAAGCTATCTTTGCTGCAAGATATTGATGGATTTTGCGTGCAAAAGCAGAAGGGATATGAGTTGCGACAACTGAGGGACATGAACAAGCTCGGTGGTAATTTGCGTGTCGTTAATCTTGAAAATGTAACTGGAAAGGATGAAGCCTCAGAGTCGAAGTTGCATCAGAAAACTCATCTTAGAGGTTTGCATCTCTCCTGGAATGATGTGGATGACATGGATGTTTCACATTTGGAGATTCTAGAAGGTTTGAGGCCGCCATCTCAATTGGAGGACCTTACAATCGAAGGTTACAAATCCACCATGTACCCAAGCTGGTTACTTGATGGATCCTATTTTGAGAATCTAGAGTCTTTTACGCTTGCTAATTGCTGTGTGATAGGAAGCCTACCACCCAATACCGAGATCTTTAGGCACTGTATGACACTTACCCTTGAGAATGTCCCGAATATGAAGACACTACCTTTTCTTCCAGAAGGTCTCACAAGCCTATCAATTGAGGGGTGCCCACTGCTTGTGTTCACTACTAATAACGATGAACTGGAACACCATGATTATAGGGAGAGCATCACGAGGGCAAACAACCTGGAAACACAACTTGTTTTGATATGGGAAGCGAATTCCGATTCAGATATTAGGAGCACATTGTCGTCCGAACACTCATCCATGAAGAAGTTGACGGAATTGATGGATACTGATATGTCGGGAAATCTTCAAACCATTGAAAGCGCTTTAGAAATAGAGAGAGATGAAGCCTTGGTTAAAGAAGATATCATCAAAGTATGGCTCTGTTGCCACGAGGAGAGGATGAGATTCATTTATTCAAGGAAGGCTGGGTTGCCGTTGGTTCTACCATCTGGACTATGCGTACTCTCTCTTTCCTCCTGTAGTATTACAGATGGAGCTTTAGCTATTTGCCTTGGTGGGCTTACTTCACTTAGAAATTTGTTCTTAACAGAGATTATGACTTTAACTACGCTTCCACCGGAAGAGGTCTTCCAACATTTGGGCAATCTTAGATACTTGGTCATTCGTTCCTGCTGGTGTCTCAGATCATTCGGGGGCTTGCGATCTGCTACCTCTCTTTCAGAAATAAGATTATTTTCCTGTCCTTCTTTACAGTTGGCACGTGGCGCAGAATTTATGCAAATGTCCCTTGAGAAGCTATGTGTATACAACTGTGTGCTTTCAGCTGACTTCTTCTGCGGTGACTGGCCACATCTGAATAATATTGGGTTATGTGGGTGTAGAAGCTCTGCGTCCTTGTATGTTGGTGATCTTACCTCCCTCAAATCATTCTCACTATATCATTTGCCAGATTTATGCGTGCTGGAAGGTTTGTCTTACCTACAGCTTCACCACGTGCATTTGATAGATGTTCCAAAGCTTACTACCGAGAGCATCTCACAGTTCCGCGTACAGCGTTCGCTCTATATTAGCAGTTCCGTTATGCTCAACCACATGATCTCCGCTGAAGGTTTCAAAGTTCCAGGGTTTCTCTCTCTTGAAAGCTGCAAGAAGCCATCCGTTTCATTCGAAGAATCTGCAAATTTCACATCCGTCAAGTGCCTGAGGTTATGTAATTGTGAAATGAGGTCACTACCAGGAAATATGAAGTGCCTATCCAGTCTAACGAAACTCGATATCTATGACTGCCCCAACATAACATCTCTACCAGATCTGCCGTCCTCCCTCCAGCATATATGTATATGGGGTTGTGAGCTTTTGAAGAAGAGCTGCAGGGCACCTGATGGAGAAAGCTGGCCAAAGATTGCGCATATCCGCTGGAAGGAATTCAGATGAATTGTGCTTCAGAATCACTACTACGGAGAAGCGCAAAGGTGAAGGTCCCATCAATGCATTATCAGAAGTACTCTATGTAATATTTATTTCATTCGCTCATGATCTTACGAACACATCATTAACTTCACGTTTCCTTTGTTTTGCAGACACCCCAAGATTTGCTCTCTCAGGTAACTTCGTCTCTTCGCCACCTGCTACAAGGTAGAGCGCCTCATGCTCATATAGCAGTTTCAGCTCTCTCCTGTAGTCCTGTGGTCTGTCCGGTTGTGCTGTCCACTCTGTTCCCTGCTTCGTCGATTGCCACATTTACGTTTCCCTGCTGCCTTCTACCGACCCACGCCTCCCTTCATCCGGTCTCTGCCACTGACGGCCCATGATCGTGTCCTTTTGCTTTCACCCCTTAAATGGAGTCTTGTTGGTCCAAGAAAATCTCTGTTTGTCTGTTGAACACTCAACTATCTCTCGTATTTTGTGTGATATCGCTCGTATTTGATTGCGTGATGTGATAATATATTGAAGTAATTGGATTTTGTACTTCGCACAAATATACAATATGCTACTGTACAAGTGTTTGTCTATGTAGTTTTCATAAAGCTTGTATGATTTGTGGAAGTTTCATATGTTTTTTTTAGCATGATGGTTCTCACC
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| CDS seq | ATGGCGGAGGTGGTGTTGGCTGGCTTACGTTTGGCAGCAACACCAATCTGTGTGAAGCTCCTCTGTAATGCTTCGACGTGCCTTGGCGTGGACATGACGCGTGAGCTCCATGAACTGGAGACCATCATCATACCACAGTTCGAGCTGGTGATTGAAGCAGCTGAGAAAGGAAACCACAGAGCCAAGCTGGACAGATGGCTCCGGGAGCTCAAACAAGCCTTCTACAATGCTGAGGACCTTCTGGACGAGCATGAGTACAACATCCTTAAGTGCAAAGCGAAACACAAGGATTCTCTAGTGAAAGATTCCACCCAGGTTCATGACTCTTCCATCAGCAATATTTTGAAGCAGCCTATGCGTGCTGTGTCCAGTAGGATGTCCAATCTGCGCCCAGAGAACAGAAAGATACTTTGCCAGTTGAATGAACTGAAGACCATGCTGGAGAAAGCCAAGGAGTTCCGTGAGCTGATTCACTTACCTGCTGGTAATAGTCTTGAGGGTCCCAGTGTACCAACAATTGTTGTTCCTGTAGTGACATCGCTATTGCCGCCAAGAGTATTTGGTCGCAACATGGATCGCGATCGCATAATACATCTTCTTACTAAGCCAATGGCTACTGTTTCTAGCTCAGTCGGCTACTCTGGTTTGGCCATTGTTGCACATGGAGGAGCAGGAAAATCCACCTTAGCACAATGTGTTTACAATGACAAGAGGGTACAAGAACATTTTGACGTCAGGATATGGGTCTGCATCTCACGCAAACTTGATGTTCATCGCCATACACGTGAGATTATCGAGTCAGCAACAAATGGAGAGTGCCCTCGTGTGGACAATCTTGATACTCTCCAGTGCAGATTGAAGGACATAATGCAAAAATCAGAGAAATTCCTGCTTGTGTTGGATGACGTCTGGTTTGATGAATCCGTCAATGAGAGGGAATGGGACCAGTTGCTTGATCCTCTTGTTTCTCAGCAGGAGGGGAGCAGAGTTTTGGTGACTTCTAGACGAGATGTACTTCCAGCTGCTCTTCACTGTAAGGATGTTGTTCATTTGGAAAACATGGAAGATGCCGAGTTCTTGGCTCTATTCAAATACCATGCTTTCTCTGGAACAGAAATCAGAAATCCACAGTTGCATGCACGGCTAGAAGAGGTCGCAGAGAAGATTGCTAAAAGGTTAGGACAATCGCCTTTAGCAGCAAGGACAGTAGGCTCCCAGCTGAGCAGGAATAAGGATATTGCCATATGGAAAAGTGCTCTAAATATTGAAAACTTAAGTGAGCCCATGAAAGCTCTGTTGTGGAGTTATAATAAATTAGATTCACGTCTGCAGAGATGTTTTCTGTACTGCAGCTTATTTCCAAAAGGTCACAAGTATAAAATTGATGAGATGGTTGACCTTTGGGTGGCAGAGGGGCTAGTTGATTCACGCAACCAGGGGGATAAGAGAATTGAAGATATTGGCAGGGATTACTTCAATGAGATGGTGTCAGGATCTTTCTTTCAACCAGTTTCTGAAAGATATATGGGTACATGGTACATTATGCATGATCTGCTTCATGATTTGGCAGAGTCACTGACTAAAGAAGACTGCTTCAGATTAGAAGATGATGGGGTGAAAGAGATACCAGCCACTGTTCGACATCTATCTATTTGTGTTGACAGTATGAAATTCCATAAGCAAAAGATCTGCAAGCTACGTTATTTACGCACTGTTATCTGCATTGACCCTCTCATGGATGACGGAGATGATATTTTTAATCAGCTATTGAAGAATCTGAAGAAGCTACGTGTACTACATTTGTCGTTTTACAACAGTAGCAGCTTGCCTGAATGTATTGGTGAGCTGAAGCACCTTCGATATTTGAGTATCATCAGCACATTGATTTCTGAACTGCCAAGATCATTGTGTACTCTTTTCCACTTGGAGCTACTTCATTTGAATGACAAGGTCAAGAATTTGCCGGACAGACTCTGTAATTTAAGAAAGTTACGACGTCTTGAAGCATATGATGACAGAAACAGAATGTATAAATTGTATAGAGCAGCTCTCCCTCAAATTCCTTACATAGGCAAGCTATCTTTGCTGCAAGATATTGATGGATTTTGCGTGCAAAAGCAGAAGGGATATGAGTTGCGACAACTGAGGGACATGAACAAGCTCGGTGGTAATTTGCGTGTCGTTAATCTTGAAAATGTAACTGGAAAGGATGAAGCCTCAGAGTCGAAGTTGCATCAGAAAACTCATCTTAGAGGTTTGCATCTCTCCTGGAATGATGTGGATGACATGGATGTTTCACATTTGGAGATTCTAGAAGGTTTGAGGCCGCCATCTCAATTGGAGGACCTTACAATCGAAGGTTACAAATCCACCATGTACCCAAGCTGGTTACTTGATGGATCCTATTTTGAGAATCTAGAGTCTTTTACGCTTGCTAATTGCTGTGTGATAGGAAGCCTACCACCCAATACCGAGATCTTTAGGCACTGTATGACACTTACCCTTGAGAATGTCCCGAATATGAAGACACTACCTTTTCTTCCAGAAGGTCTCACAAGCCTATCAATTGAGGGGTGCCCACTGCTTGTGTTCACTACTAATAACGATGAACTGGAACACCATGATTATAGGGAGAGCATCACGAGGGCAAACAACCTGGAAACACAACTTGTTTTGATATGGGAAGCGAATTCCGATTCAGATATTAGGAGCACATTGTCGTCCGAACACTCATCCATGAAGAAGTTGACGGAATTGATGGATACTGATATGTCGGGAAATCTTCAAACCATTGAAAGCGCTTTAGAAATAGAGAGAGATGAAGCCTTGGTTAAAGAAGATATCATCAAAGTATGGCTCTGTTGCCACGAGGAGAGGATGAGATTCATTTATTCAAGGAAGGCTGGGTTGCCGTTGGTTCTACCATCTGGACTATGCGTACTCTCTCTTTCCTCCTGTAGTATTACAGATGGAGCTTTAGCTATTTGCCTTGGTGGGCTTACTTCACTTAGAAATTTGTTCTTAACAGAGATTATGACTTTAACTACGCTTCCACCGGAAGAGGTCTTCCAACATTTGGGCAATCTTAGATACTTGGTCATTCGTTCCTGCTGGTGTCTCAGATCATTCGGGGGCTTGCGATCTGCTACCTCTCTTTCAGAAATAAGATTATTTTCCTGTCCTTCTTTACAGTTGGCACGTGGCGCAGAATTTATGCAAATGTCCCTTGAGAAGCTATGTGTATACAACTGTGTGCTTTCAGCTGACTTCTTCTGCGGTGACTGGCCACATCTGAATAATATTGGGTTATGTGGGTGTAGAAGCTCTGCGTCCTTGTATGTTGGTGATCTTACCTCCCTCAAATCATTCTCACTATATCATTTGCCAGATTTATGCGTGCTGGAAGGTTTGTCTTACCTACAGCTTCACCACGTGCATTTGATAGATGTTCCAAAGCTTACTACCGAGAGCATCTCACAGTTCCGCGTACAGCGTTCGCTCTATATTAGCAGTTCCGTTATGCTCAACCACATGATCTCCGCTGAAGGTTTCAAAGTTCCAGGGTTTCTCTCTCTTGAAAGCTGCAAGAAGCCATCCGTTTCATTCGAAGAATCTGCAAATTTCACATCCGTCAAGTGCCTGAGGTTATGTAATTGTGAAATGAGGTCACTACCAGGAAATATGAAGTGCCTATCCAGTCTAACGAAACTCGATATCTATGACTGCCCCAACATAACATCTCTACCAGATCTGCCGTCCTCCCTCCAGCATATATGTATATGGGGTTGTGAGCTTTTGAAGAAGAGCTGCAGGGCACCTGATGGAGAAAGCTGGCCAAAGATTGCGCATATCCGCTGGAAGGAATTCAGATGA
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| Protein seq | MAEVVLAGLRLAATPICVKLLCNASTCLGVDMTRELHELETIIIPQFELVIEAAEKGNHRAKLDRWLRELKQAFYNAEDLLDEHEYNILKCKAKHKDSLVKDSTQVHDSSISNILKQPMRAVSSRMSNLRPENRKILCQLNELKTMLEKAKEFRELIHLPAGNSLEGPSVPTIVVPVVTSLLPPRVFGRNMDRDRIIHLLTKPMATVSSSVGYSGLAIVAHGGAGKSTLAQCVYNDKRVQEHFDVRIWVCISRKLDVHRHTREIIESATNGECPRVDNLDTLQCRLKDIMQKSEKFLLVLDDVWFDESVNEREWDQLLDPLVSQQEGSRVLVTSRRDVLPAALHCKDVVHLENMEDAEFLALFKYHAFSGTEIRNPQLHARLEEVAEKIAKRLGQSPLAARTVGSQLSRNKDIAIWKSALNIENLSEPMKALLWSYNKLDSRLQRCFLYCSLFPKGHKYKIDEMVDLWVAEGLVDSRNQGDKRIEDIGRDYFNEMVSGSFFQPVSERYMGTWYIMHDLLHDLAESLTKEDCFRLEDDGVKEIPATVRHLSICVDSMKFHKQKICKLRYLRTVICIDPLMDDGDDIFNQLLKNLKKLRVLHLSFYNSSSLPECIGELKHLRYLSIISTLISELPRSLCTLFHLELLHLNDKVKNLPDRLCNLRKLRRLEAYDDRNRMYKLYRAALPQIPYIGKLSLLQDIDGFCVQKQKGYELRQLRDMNKLGGNLRVVNLENVTGKDEASESKLHQKTHLRGLHLSWNDVDDMDVSHLEILEGLRPPSQLEDLTIEGYKSTMYPSWLLDGSYFENLESFTLANCCVIGSLPPNTEIFRHCMTLTLENVPNMKTLPFLPEGLTSLSIEGCPLLVFTTNNDELEHHDYRESITRANNLETQLVLIWEANSDSDIRSTLSSEHSSMKKLTELMDTDMSGNLQTIESALEIERDEALVKEDIIKVWLCCHEERMRFIYSRKAGLPLVLPSGLCVLSLSSCSITDGALAICLGGLTSLRNLFLTEIMTLTTLPPEEVFQHLGNLRYLVIRSCWCLRSFGGLRSATSLSEIRLFSCPSLQLARGAEFMQMSLEKLCVYNCVLSADFFCGDWPHLNNIGLCGCRSSASLYVGDLTSLKSFSLYHLPDLCVLEGLSYLQLHHVHLIDVPKLTTESISQFRVQRSLYISSSVMLNHMISAEGFKVPGFLSLESCKKPSVSFEESANFTSVKCLRLCNCEMRSLPGNMKCLSSLTKLDIYDCPNITSLPDLPSSLQHICIWGCELLKKSCRAPDGESWPKIAHIRWKEFR |
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| Function | Putative disease resistance protein At3g14460 [UniProtKB/Swiss-Prot:Q9LRR5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_01g0782100 | OsNip_01t0782100-01 | Chr01 | 33136846 | 33145541 | + | RAP2018-11-26 | ||
| CDS seq | ATGGCGGAGGTGGTGTTGGCTGGCTTACGTTTGGCAGCAACACCAATCTGTGTGAAGCTCCTCTGTAATGCTTCGACGTGCCTTGGCGTGGACATGACGCGTGAGCTCCATGAACTGGAGACCATCATCATACCACAGTTCGAGCTGGTGATTGAAGCAGCTGAGAAAGGAAACCACAGAGCCAAGCTGGACAGATGGCTCCGGGAGCTCAAACAAGCCTTCTACAATGCTGAGGACCTTCTGGACGAGCATGAGTACAACATCCTTAAGTGCAAAGCGAAACACAAGGATTCTCTAGTGAAAGATTCCACCCAGGTTCATGACTCTTCCATCAGCAATATTTTGAAGCAGCCTATGCGTGCTGTGTCCAGTAGGATGTCCAATCTGCGCCCAGAGAACAGAAAGATACTTTGCCAGTTGAATGAACTGAAGACCATGCTGGAGAAAGCCAAGGAGTTCCGTGAGCTGATTCACTTACCTGCTGGTAATAGTCTTGAGGGTCCCAGTGTACCAACAATTGTTGTTCCTGTAGTGACATCGCTATTGCCGCCAAGAGTATTTGGTCGCAACATGGATCGCGATCGCATAATACATCTTCTTACTAAGCCAATGGCTACTGTTTCTAGCTCAGTCGGCTACTCTGGTTTGGCCATTGTTGCACATGGAGGAGCAGGAAAATCCACCTTAGCACAATGTGTTTACAATGACAAGAGGGTACAAGAACATTTTGACGTCAGGATATGGGTCTGCATCTCACGCAAACTTGATGTTCATCGCCATACACGTGAGATTATCGAGTCAGCAACAAATGGAGAGTGCCCTCGTGTGGACAATCTTGATACTCTCCAGTGCAGATTGAAGGACATAATGCAAAAATCAGAGAAATTCCTGCTTGTGTTGGATGACGTCTGGTTTGATGAATCCGTCAATGAGAGGGAATGGGACCAGTTGCTTGATCCTCTTGTTTCTCAGCAGGAGGGGAGCAGAGTTTTGGTGACTTCTAGACGAGATGTACTTCCAGCTGCTCTTCACTGTAAGGATGTTGTTCATTTGGAAAACATGGAAGATGCCGAGTTCTTGGCTCTATTCAAATACCATGCTTTCTCTGGAACAGAAATCAGAAATCCACAGTTGCATGCACGGCTAGAAGAGGTCGCAGAGAAGATTGCTAAAAGGTTAGGACAATCGCCTTTAGCAGCAAGGACAGTAGGCTCCCAGCTGAGCAGGAATAAGGATATTGCCATATGGAAAAGTGCTCTAAATATTGAAAACTTAAGTGAGCCCATGAAAGCTCTGTTGTGGAGTTATAATAAATTAGATTCACGTCTGCAGAGATGTTTTCTGTACTGCAGCTTATTTCCAAAAGGTCACAAGTATAAAATTGATGAGATGGTTGACCTTTGGGTGGCAGAGGGGCTAGTTGATTCACGCAACCAGGGGGATAAGAGAATTGAAGATATTGGCAGGGATTACTTCAATGAGATGGTGTCAGGATCTTTCTTTCAACCAGTTTCTGAAAGATATATGGGTACATGGTACATTATGCATGATCTGCTTCATGATTTGGCAGAGTCACTGACTAAAGAAGACTGCTTCAGATTAGAAGATGATGGGGTGAAAGAGATACCAGCCACTGTTCGACATCTATCTATTTGTGTTGACAGTATGAAATTCCATAAGCAAAAGATCTGCAAGCTACGTTATTTACGCACTGTTATCTGCATTGACCCTCTCATGGATGACGGAGATGATATTTTTAATCAGCTATTGAAGAATCTGAAGAAGCTACGTGTACTACATTTGTCGTTTTACAACAGTAGCAGCTTGCCTGAATGTATTGGTGAGCTGAAGCACCTTCGATATTTGAGTATCATCAGCACATTGATTTCTGAACTGCCAAGATCATTGTGTACTCTTTTCCACTTGGAGCTACTTCATTTGAATGACAAGGTCAAGAATTTGCCGGACAGACTCTGTAATTTAAGAAAGTTACGACGTCTTGAAGCATATGATGACAGAAACAGAATGTATAAATTGTATAGAGCAGCTCTCCCTCAAATTCCTTACATAGGCAAGCTATCTTTGCTGCAAGATATTGATGGATTTTGCGTGCAAAAGCAGAAGGGATATGAGTTGCGACAACTGAGGGACATGAACAAGCTCGGTGGTAATTTGCGTGTCGTTAATCTTGAAAATGTAACTGGAAAGGATGAAGCCTCAGAGTCGAAGTTGCATCAGAAAACTCATCTTAGAGGTTTGCATCTCTCCTGGAATGATGTGGATGACATGGATGTTTCACATTTGGAGATTCTAGAAGGTTTGAGGCCGCCATCTCAATTGGAGGACCTTACAATCGAAGGTTACAAATCCACCATGTACCCAAGCTGGTTACTTGATGGATCCTATTTTGAGAATCTAGAGTCTTTTACGCTTGCTAATTGCTGTGTGATAGGAAGCCTACCACCCAATACCGAGATCTTTAGGCACTGTATGACACTTACCCTTGAGAATGTCCCGAATATGAAGACACTACCTTTTCTTCCAGAAGGTCTCACAAGCCTATCAATTGAGGGGTGCCCACTGCTTGTGTTCACTACTAATAACGATGAACTGGAACACCATGATTATAGGGAGAGCATCACGAGGGCAAACAACCTGGAAACACAACTTGTTTTGATATGGGAAGCGAATTCCGATTCAGATATTAGGAGCACATTGTCGTCCGAACACTCATCCATGAAGAAGTTGACGGAATTGATGGATACTGATATGTCGGGAAATCTTCAAACCATTGAAAGCGCTTTAGAAATAGAGAGAGATGAAGCCTTGGTTAAAGAAGATATCATCAAAGTATGGCTCTGTTGCCACGAGGAGAGGATGAGATTCATTTATTCAAGGAAGGCTGGGTTGCCGTTGGTTCTACCATCTGGACTATGCGTACTCTCTCTTTCCTCCTGTAGTATTACAGATGGAGCTTTAGCTATTTGCCTTGGTGGGCTTACTTCACTTAGAAATTTGTTCTTAACAGAGATTATGACTTTAACTACGCTTCCACCGGAAGAGGTCTTCCAACATTTGGGCAATCTTAGATACTTGGTCATTCGTTCCTGCTGGTGTCTCAGATCATTCGGGGGCTTGCGATCTGCTACCTCTCTTTCAGAAATAAGATTATTTTCCTGTCCTTCTTTACAGTTGGCACGTGGCGCAGAATTTATGCAAATGTCCCTTGAGAAGCTATGTGTATACAACTGTGTGCTTTCAGCTGACTTCTTCTGCGGTGACTGGCCACATCTGAATAATATTGGGTTATGTGGGTGTAGAAGCTCTGCGTCCTTGTATGTTGGTGATCTTACCTCCCTCAAATCATTCTCACTATATCATTTGCCAGATTTATGCGTGCTGGAAGGTTTGTCTTACCTACAGCTTCACCACGTGCATTTGATAGATGTTCCAAAGCTTACTACCGAGAGCATCTCACAGTTCCGCGTACAGCGTTCGCTCTATATTAGCAGTTCCGTTATGCTCAACCACATGATCTCCGCTGAAGGTTTCAAAGTTCCAGGGTTTCTCTCTCTTGAAAGCTGCAAGAAGCCATCCGTTTCATTCGAAGAATCTGCAAATTTCACATCCGTCAAGTGCCTGAGGTTATGTAATTGTGAAATGAGGTCACTACCAGGAAATATGAAGTGCCTATCCAGTCTAACGAAACTCGATATCTATGACTGCCCCAACATAACATCTCTACCAGATCTGCCGTCCTCCCTCCAGCATATATGTATATGGGGTTGTGAGCTTTTGAAGAAGAGCTGCAGGGCACCTGATGGAGAAAGCTGGCCAAAGATTGCGCATATCCGCTGGAAGGAATTCAGATGA
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| Protein seq | MAEVVLAGLRLAATPICVKLLCNASTCLGVDMTRELHELETIIIPQFELVIEAAEKGNHRAKLDRWLRELKQAFYNAEDLLDEHEYNILKCKAKHKDSLVKDSTQVHDSSISNILKQPMRAVSSRMSNLRPENRKILCQLNELKTMLEKAKEFRELIHLPAGNSLEGPSVPTIVVPVVTSLLPPRVFGRNMDRDRIIHLLTKPMATVSSSVGYSGLAIVAHGGAGKSTLAQCVYNDKRVQEHFDVRIWVCISRKLDVHRHTREIIESATNGECPRVDNLDTLQCRLKDIMQKSEKFLLVLDDVWFDESVNEREWDQLLDPLVSQQEGSRVLVTSRRDVLPAALHCKDVVHLENMEDAEFLALFKYHAFSGTEIRNPQLHARLEEVAEKIAKRLGQSPLAARTVGSQLSRNKDIAIWKSALNIENLSEPMKALLWSYNKLDSRLQRCFLYCSLFPKGHKYKIDEMVDLWVAEGLVDSRNQGDKRIEDIGRDYFNEMVSGSFFQPVSERYMGTWYIMHDLLHDLAESLTKEDCFRLEDDGVKEIPATVRHLSICVDSMKFHKQKICKLRYLRTVICIDPLMDDGDDIFNQLLKNLKKLRVLHLSFYNSSSLPECIGELKHLRYLSIISTLISELPRSLCTLFHLELLHLNDKVKNLPDRLCNLRKLRRLEAYDDRNRMYKLYRAALPQIPYIGKLSLLQDIDGFCVQKQKGYELRQLRDMNKLGGNLRVVNLENVTGKDEASESKLHQKTHLRGLHLSWNDVDDMDVSHLEILEGLRPPSQLEDLTIEGYKSTMYPSWLLDGSYFENLESFTLANCCVIGSLPPNTEIFRHCMTLTLENVPNMKTLPFLPEGLTSLSIEGCPLLVFTTNNDELEHHDYRESITRANNLETQLVLIWEANSDSDIRSTLSSEHSSMKKLTELMDTDMSGNLQTIESALEIERDEALVKEDIIKVWLCCHEERMRFIYSRKAGLPLVLPSGLCVLSLSSCSITDGALAICLGGLTSLRNLFLTEIMTLTTLPPEEVFQHLGNLRYLVIRSCWCLRSFGGLRSATSLSEIRLFSCPSLQLARGAEFMQMSLEKLCVYNCVLSADFFCGDWPHLNNIGLCGCRSSASLYVGDLTSLKSFSLYHLPDLCVLEGLSYLQLHHVHLIDVPKLTTESISQFRVQRSLYISSSVMLNHMISAEGFKVPGFLSLESCKKPSVSFEESANFTSVKCLRLCNCEMRSLPGNMKCLSSLTKLDIYDCPNITSLPDLPSSLQHICIWGCELLKKSCRAPDGESWPKIAHIRWKEFR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_01g0782100 | OsNip_01t0782100-02 | Chr01 | 33136787 | 33145647 | + | IsoSeq | ||
| CDS seq | ATGAATTGTGCTTCAGAATCACTACTACGGAGAAGCGCAAAGACACCCCAAGATTTGCTCTCTCAGGTAACTTCGTCTCTTCGCCACCTGCTACAAGGTAGAGCGCCTCATGCTCATATAGCAGTTTCAGCTCTCTCCTGTAGTCCTGTGGTCTGTCCGGTTGTGCTGTCCACTCTGTTCCCTGCTTCGTCGATTGCCACATTTACGTTTCCCTGCTGCCTTCTACCGACCCACGCCTCCCTTCATCCGGTCTCTGCCACTGACGGC
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| Protein seq | MNCASESLLRRSAKTPQDLLSQVTSSLRHLLQGRAPHAHIAVSALSCSPVVCPVVLSTLFPASSIATFTFPCCLLPTHASLHPVSATDG |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr01 | 33137162 | 33141115 | + | OsNip_01t0782100-02 | OsNip_01t0782100-02,OsNip_01t0782100-01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.638429 | 1.309355 | 2.606901 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0781700 | RBH | 1.371689 | 1.113303 | 1.930191 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g57340 | RBH | 1.109995 | 0.875084 | 0.737331 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0782100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0035900 | RBH | 0.000000 | 0.000000 | 0.126883 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0035400 | RBH | 0.017783 | 6.563830 | 0.378130 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0035780 | SBH | 0.000000 | 65.043152 | 1.550050 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0035170 | RBH | 0.027790 | 0.836313 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0034900 | SBH | 2.097582 | 25.890068 | 3.360801 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0547400 | SBH | 1.3057825 | 5.0203275 | 3.0223345 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0034670 | RBH | 0.425814 | 0.328717 | 0.707226 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0543300 | RBH | 1.498944 | 10.4450555 | 0.817648 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0034760 | SBH | 0.064270 | 0.125168 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0034830 | SBH | 0.282855 | 12.458381 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0035060 | SBH | 2.401356 | 31.275534 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0035160 | SBH | 0.047508 | 0.470981 | 0.178595 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0034960 | SBH | 0.0 | 15.217903 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G035420 | SBH | 0.135749 | 0.759889 | 0.712358 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0035100 | SBH | 0.810962 | 13.838964 | 0.451724 |
