Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_01g0701400 | OGI:01087560 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr01:29036327-29041621 | ||||||||
| Gene Symbol | SLB1, OsSLB1, Os900/CYP711A2, Os900, CYP711A2, OsCYP711A2, OsMAX1, SLB2, CYP711A1, OsCYP711A1, Os1400/CYP711A3, Os1400, CYP711A3, OsCYP711A3 | ||||||||||
| DNA seq | GCGACAGTGAGGCAAAGAGGGGAAGGCAGAGACGCAAGGGTGAGATGGAGATCATCAGCACAGTGCTGGGCTCAACGGCGGAGTACGCGGTCACCTTGGTGGCCATGGCTGTGGGGCTCCTGCTGTTGGGCTACTTGTACGAGCCATACTGGAAAGTGCGGCACGTGCCGGGCCCCGTGCCCCTGCCGTTCATCGGCCACCTCCACCTGCTCGCCATGCACGGGCCGGACGTGTTCACCGTGCTCGCAAGGAAGTACGGTCCTGTCTTCAGGTGACTGGCACCTCTGCTTACTGGTGCTTCTCTGTCTCGAACGCAGAGCTCAGAACTGGGAATACCAGGGTCTACTACCCGGTTAACTGGATCTAGTTTAATTTGCTCGTAGATTTCACATGGGAAGACAACCATTGGTCATGGTGGCGGATGCCGAGCTGTGCAAGGAAGTGGGCGTAAAGAAATTCAAGAGCATTCCTAACCGAAGCATGCCCTCAGCCATTGCCAATTCTCTTATTAATCAGAAAGGCCTGTGCTTCACAAGGTAGGTAGCAACTCAGATTGGTTCCTGTAAAGAGTGGAGTTTTTTTTTCTGCAATTTATATATCTTCAACCAAAAAAAATATATAAGACGCAAGTTTTTGACAGTCTTCAATAGATAATTTTGACCATTAATATTACTCCTATGATATTAATATCATATAGAATTATATTCAAATATGAAGATAAGGATATCACATATGTAACACTACATAAATATTTATTTTAATTAATAACTCCTTCTAAAACTTACATAGTTTTTTCATTGTAGTTTATTTCACAAAATTAACAAAACCACTATTTAACAAAATTGTGTATCGTTTATTTAACAAAAATACTTAAGTATTTACATAGTTTTTTCATCGTAATTTATTATTACAATATTTTTTTAATCATTAAGGATACAAGTATAAAAGTTTTATAAGTTGCTAATAAGTTGTTCGAATAAATATAAACATAAGTGAAAACATGAGTCTATTATTTTATTTAGTACATTGATAAACTACAAATATCTACTATTATAAAAATTAAAGATGTTTTTGCCGGTATTTTGATACGTCATCCGTGTTTGAGTCGGTATTTAAGATCGTTCGCTTTTGGAAATACAGTCCGTGTTAGAGTTGGATTTTAAGCTCGTTTGCTTTTAGAAATAAAGAGTCGTATAAAAAGTCTCTTTTAAAAAACTCTGTATGCTAACTTGAGATAAAAGTCGGACTACTAATTGCAACTCATGATTTTCTAAAGAAAAACAAGCGAATTCCTACAGTGAATTTTACCCTAGCTAAACCGTATAACAATAATAAGATTAAAATAACATTCACCAGTTGCAATGCACGTGCATTTTTCTATGAAGTAAAAGTAAAAGTATATATAATATACAACCCTTATTTCTATGTCATGCATGTCCATAAATTTTCACAACTCCATCACTACACATCGGGTGCTTTTCCTTTTTCAAGATGGTGCATATGATTCTATTTTTCTTCAAATAACATGGTACTATTTAGGCCTCGAGAGAGAAACATGATAGTTCCATACTTCCTTTTCATCCTTGCTTAATAATATAAGTAGTGTTTTTTCTCTGCTGCTTTGCAGCAAACCTAAATAAAAAAGTATAATTATATTTGATATATAACTCTTACTTTCTTGCATAAATATAAATGTATTTATATATTACTACATCCGTCCTAAAATATATTAACTTTTAACTATAGATCTCGACATGCACTTATGTAGATTCGGAACTCAAAATAGTTATATGTTGAGACAGGGGGAGCATATTATTATTAAGATAGCTCTAAAATGAGTTTCACCGCGTTTACTCTGGAGGCCTAAAAATTACCACATTTAATCGGACAAAAGGAGAAATATGTTAACCGTTAAATTGTGTTGGTCTAGAATACATCGGTGGAGATTTATTGATATAATTGTATACAAAGTACAATGTTAAATATGGTAGCATAAATCGACCCGTATAGAAACAGAATCAAAGTTGTATACAAATTCAACTCAATTTTTAAATCTAGCTCCGTGCAAATTGCACAGGAAAATCCTCTAGTTTCGTTAACCAGATCGAACAATCTCCACAGCCTGGCATATATGGTTTATAACTTGGTATCATTCCTAGTATTTGAACTCACATTTGCTATCTGATACTCTCTTTTTTCATATTATAAGTCACTCGTCCCAAAATATACCAAGCCAAGATTGGATGGGACACGGTATATTACCTCTGTCCAGATTTGTATCAGTAGCATGAGTCACATCCAATCCTGGTTGCTATATTTTGGGACAGAGCGAGCTACGGGTGAAAATGGTATGGAAATTTCCCATCCATACTGATACATTTTTTGCAAAGCTAACATATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAATTTATCGATTCTAAAATTTACTTTTCTAATTTCTGTCAGTGCCACATTGGAGTTGGCACTAAATATTTAAATTCATCAATATGAAAATTTGCTGACCGTTTTTTACAGTTCATAAATATTTTAACTAATTACAAATTGTTAACTTTCCGTTCATCATCTCTTTTTTGTCTGCATTTTTGCCCGTCAATGTGCTAATTTGGTTGAATCGGACTCGAGTTCACCAGAAAGATAAAAACTAGGGTTCGATAAACTCAAGTTCGAGCTTGATACGGGAGCGATTTTCCATGGGATTTCCTTCAATTTCTTGAGGGAAAAGATAGAGTATGAGATATAGATCAAAAGCCTTCAACTAATTTAAGATTATCTCCACGGGTTTAGTTGAATCGGATGCGGGATTGGGGTGGCTCGGCTGGAGCTTGAAGAAGCTAATGTAGCGACAGGAAGTTAAATTAATTAGACTTATTTTCCTAGGCGATCTAGGAGAACGCAAACTGGACTTTAACGGAGAAAGGAAACAGGGAAACAGGCTAGAAACAAAAAAGAGACAAAAGGGAAAGAATCTGGACTTTTTCATATTCGGCCCAAACCTAAAAGTGAGGATTTTGATTCCATTTTCTAATTAAATAATTGCTGAAATAATCTTTCGTTTATTTTGTGTTCGTGTTCCCAGACCTAGCTTTATCCCATGTGTGTTGGTAGAAAGAAAACAATTTGTTTTGTTAGCCGGTATGGGATCATGATTTGGATTAAATCTAATTATAAAGATAGAGCATATATTTGATAAATCTACATCATTATATTTAAACATGTATCAAAACTTTTTCTAGATCTACTATAATCAACGGTGTATATTTTTGTTTCAATTAATGTGTTGATTTCTAAGCCACACATGTGAACAAATATTCCTTTATTACTGTAATAAAATAATTTATAAATATGTGGAAAAAGCATATATATAGTTCTTCTACACGGAAAGAAAACATATATTACACTAGGTTATGAAAAAAATTGTCATTTTAAAGTTATTTAATATTTGGTGTACTTTCTTTTTTCCGTTGCAAACGTAGAAAAATGGCTGTAGTGCTGCACATGCAGGGGTTCGAGGTGGACGGCGTTGCGAAACATGATCATCTCCATCTACCAGCCGTCTCACCTGGCTAGCCTGATCCCCACCATGCAGTCGTGCATTGAGTGCGTGTCCAAGAACCTTGATGGCCAAGAGGACATAACATTCTCCGATCTCGCTCTCGGCTTCGCCACCGATGTCATCGGCCAGGCGGCGTTCGGAACGGACTTTGGCCTGTCAAAAATATCAGCATCTTCGAATGACGACGACATCGACAAGATCGCCACTGATACCAGCGCGGAGGCCAAGGCATCATCGGAGTTCATCAGGATGCACGTGCACGCGACCACGTCTCTCAAGATGGACCTGTCCGGCTCACTGTCCATCATCATCGGCCAACTCCTGCCATTCCTCCAAGAGCCGTTCCGGCAGGTGCTCAAGAGGATTCCCTGGACGGCGGACCACGAGATCGACCATGTGAACCTCGCGCTCGGGGGACAGATGGACAAAATCGTTGCCGAGAGAGCGGCGGCAATGGAGCGCGACCAGGCAGCGCCGCATGCGCAGCAGCGCAAGGACTTCCTGTCCGTCGTCCTCGCGGCGAGAGAGTCGAACAAATCCTGGCGGGAGCTTCTTACGCCGGACTACATCAGCGCGCTCACTTACGAGCACCTCCTCGCCGGGTCGGCCACGACGGCGTTCACTCTCTCCACGGTGCTCTACCTCGTCTCCAAGCACCCGGAGGTGGAGGAGAAGTTGCTCAGGGAGATTGACGGGTTCGGACCACACGACCATGCGCCGACGGCCGAGGATTTGCAGACCAAGTTCCCCTACCTTGATCAGGCATGCATGCCCTTCTTCGACATTGGTCGTATTTATGGTCTTCGATTGTGGAGTCGTGAATAGTAAGACCTGAATTTCTGACCGAGCATTGCACTTATCATGTGCGTACTATGCAGGTCGTGAAGGAATCGATGAGATTCTACTTTTTATCGCCATTGATAGCAAGGGAAACGTGCGAACAGGTTGAAATTGGAGGATATGCCCTTCCAAAGGTACTAGATCCGGCCAATAATCCAGAGTTCCAGACAGACTCTGCTTCGTTGTTTCCGTACTAGTATACCCTTGTTTTTTTCAGGGAACATGGGTGTGGCTGGCACCAGGAGTCCTAGCGAAGGATCCCAAGAACTTCCCGGAGCCAGAGGTATTCCGGCCGGAGCGGTTCGACCCCAACGGCGAGGAGGAGAAGAGGAGGCACCCATACGCGTTCATTCCGTTTGGGATCGGGCCAAGGGCGTGCATCGGCCAGAAGTTCTCCATCCAGGAGATCAAACTGTCAGTGATCCATCTGTACCGTAACTACGTGTTTCGGCACTCGCCCAGCATGGAGTCACCTCTCGAGTTTCAGTACTCGATCGTTTGCAACTTCAAGTACGGCGTCAAGCTTCGGGTCATCAAGAGGCACACTGCATAGGCACATCATCAGCAGAACTGTATATTTATCAGTTCGAGCTAAGCGTCTGCATTTAATACTGTGTCAAAACAAAAGAACTGTCAACGGTTCACTTCGCCACTGCTAAAATGGTACTCCTACTAGTATTGTTCTACCAGTCCGAAGTCCAACACAGGCACATAGCCCAGCTACGTTTAATGGGGTCTCTTGTAAAAAATTTGGAAAAAGTATACTTTGGCTCCCATAACTATCGCCTGAGTATGATTCATATCCTCCAA
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| CDS seq | ATGGAGATCATCAGCACAGTGCTGGGCTCAACGGCGGAGTACGCGGTCACCTTGGTGGCCATGGCTGTGGGGCTCCTGCTGTTGGGCTACTTGTACGAGCCATACTGGAAAGTGCGGCACGTGCCGGGCCCCGTGCCCCTGCCGTTCATCGGCCACCTCCACCTGCTCGCCATGCACGGGCCGGACGTGTTCACCGTGCTCGCAAGGAAGTACGGTCCTGTCTTCAGATTTCACATGGGAAGACAACCATTGGTCATGGTGGCGGATGCCGAGCTGTGCAAGGAAGTGGGCGTAAAGAAATTCAAGAGCATTCCTAACCGAAGCATGCCCTCAGCCATTGCCAATTCTCTTATTAATCAGAAAGGCCTGTGCTTCACAAGGGGTTCGAGGTGGACGGCGTTGCGAAACATGATCATCTCCATCTACCAGCCGTCTCACCTGGCTAGCCTGATCCCCACCATGCAGTCGTGCATTGAGTGCGTGTCCAAGAACCTTGATGGCCAAGAGGACATAACATTCTCCGATCTCGCTCTCGGCTTCGCCACCGATGTCATCGGCCAGGCGGCGTTCGGAACGGACTTTGGCCTGTCAAAAATATCAGCATCTTCGAATGACGACGACATCGACAAGATCGCCACTGATACCAGCGCGGAGGCCAAGGCATCATCGGAGTTCATCAGGATGCACGTGCACGCGACCACGTCTCTCAAGATGGACCTGTCCGGCTCACTGTCCATCATCATCGGCCAACTCCTGCCATTCCTCCAAGAGCCGTTCCGGCAGGTGCTCAAGAGGATTCCCTGGACGGCGGACCACGAGATCGACCATGTGAACCTCGCGCTCGGGGGACAGATGGACAAAATCGTTGCCGAGAGAGCGGCGGCAATGGAGCGCGACCAGGCAGCGCCGCATGCGCAGCAGCGCAAGGACTTCCTGTCCGTCGTCCTCGCGGCGAGAGAGTCGAACAAATCCTGGCGGGAGCTTCTTACGCCGGACTACATCAGCGCGCTCACTTACGAGCACCTCCTCGCCGGGTCGGCCACGACGGCGTTCACTCTCTCCACGGTGCTCTACCTCGTCTCCAAGCACCCGGAGGTGGAGGAGAAGTTGCTCAGGGAGATTGACGGGTTCGGACCACACGACCATGCGCCGACGGCCGAGGATTTGCAGACCAAGTTCCCCTACCTTGATCAGGTCGTGAAGGAATCGATGAGATTCTACTTTTTATCGCCATTGATAGCAAGGGAAACGTGCGAACAGGTTGAAATTGGAGGATATGCCCTTCCAAAGGGAACATGGGTGTGGCTGGCACCAGGAGTCCTAGCGAAGGATCCCAAGAACTTCCCGGAGCCAGAGGTATTCCGGCCGGAGCGGTTCGACCCCAACGGCGAGGAGGAGAAGAGGAGGCACCCATACGCGTTCATTCCGTTTGGGATCGGGCCAAGGGCGTGCATCGGCCAGAAGTTCTCCATCCAGGAGATCAAACTGTCAGTGATCCATCTGTACCGTAACTACGTGTTTCGGCACTCGCCCAGCATGGAGTCACCTCTCGAGTTTCAGTACTCGATCGTTTGCAACTTCAAGTACGGCGTCAAGCTTCGGGTCATCAAGAGGCACACTGCATAG
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| Protein seq | MEIISTVLGSTAEYAVTLVAMAVGLLLLGYLYEPYWKVRHVPGPVPLPFIGHLHLLAMHGPDVFTVLARKYGPVFRFHMGRQPLVMVADAELCKEVGVKKFKSIPNRSMPSAIANSLINQKGLCFTRGSRWTALRNMIISIYQPSHLASLIPTMQSCIECVSKNLDGQEDITFSDLALGFATDVIGQAAFGTDFGLSKISASSNDDDIDKIATDTSAEAKASSEFIRMHVHATTSLKMDLSGSLSIIIGQLLPFLQEPFRQVLKRIPWTADHEIDHVNLALGGQMDKIVAERAAAMERDQAAPHAQQRKDFLSVVLAARESNKSWRELLTPDYISALTYEHLLAGSATTAFTLSTVLYLVSKHPEVEEKLLREIDGFGPHDHAPTAEDLQTKFPYLDQVVKESMRFYFLSPLIARETCEQVEIGGYALPKGTWVWLAPGVLAKDPKNFPEPEVFRPERFDPNGEEEKRRHPYAFIPFGIGPRACIGQKFSIQEIKLSVIHLYRNYVFRHSPSMESPLEFQYSIVCNFKYGVKLRVIKRHTA |
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| Function | Cytochrome P450 711A1 [UniProtKB/Swiss-Prot:B9DFU2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_01g0701400 | OsNip_01t0701400-01 | Chr01 | 29036327 | 29041621 | + | RAP2018-11-26 | ||
| CDS seq | ATGGAGATCATCAGCACAGTGCTGGGCTCAACGGCGGAGTACGCGGTCACCTTGGTGGCCATGGCTGTGGGGCTCCTGCTGTTGGGCTACTTGTACGAGCCATACTGGAAAGTGCGGCACGTGCCGGGCCCCGTGCCCCTGCCGTTCATCGGCCACCTCCACCTGCTCGCCATGCACGGGCCGGACGTGTTCACCGTGCTCGCAAGGAAGTACGGTCCTGTCTTCAGATTTCACATGGGAAGACAACCATTGGTCATGGTGGCGGATGCCGAGCTGTGCAAGGAAGTGGGCGTAAAGAAATTCAAGAGCATTCCTAACCGAAGCATGCCCTCAGCCATTGCCAATTCTCTTATTAATCAGAAAGGCCTGTGCTTCACAAGGGGTTCGAGGTGGACGGCGTTGCGAAACATGATCATCTCCATCTACCAGCCGTCTCACCTGGCTAGCCTGATCCCCACCATGCAGTCGTGCATTGAGTGCGTGTCCAAGAACCTTGATGGCCAAGAGGACATAACATTCTCCGATCTCGCTCTCGGCTTCGCCACCGATGTCATCGGCCAGGCGGCGTTCGGAACGGACTTTGGCCTGTCAAAAATATCAGCATCTTCGAATGACGACGACATCGACAAGATCGCCACTGATACCAGCGCGGAGGCCAAGGCATCATCGGAGTTCATCAGGATGCACGTGCACGCGACCACGTCTCTCAAGATGGACCTGTCCGGCTCACTGTCCATCATCATCGGCCAACTCCTGCCATTCCTCCAAGAGCCGTTCCGGCAGGTGCTCAAGAGGATTCCCTGGACGGCGGACCACGAGATCGACCATGTGAACCTCGCGCTCGGGGGACAGATGGACAAAATCGTTGCCGAGAGAGCGGCGGCAATGGAGCGCGACCAGGCAGCGCCGCATGCGCAGCAGCGCAAGGACTTCCTGTCCGTCGTCCTCGCGGCGAGAGAGTCGAACAAATCCTGGCGGGAGCTTCTTACGCCGGACTACATCAGCGCGCTCACTTACGAGCACCTCCTCGCCGGGTCGGCCACGACGGCGTTCACTCTCTCCACGGTGCTCTACCTCGTCTCCAAGCACCCGGAGGTGGAGGAGAAGTTGCTCAGGGAGATTGACGGGTTCGGACCACACGACCATGCGCCGACGGCCGAGGATTTGCAGACCAAGTTCCCCTACCTTGATCAGGTCGTGAAGGAATCGATGAGATTCTACTTTTTATCGCCATTGATAGCAAGGGAAACGTGCGAACAGGTTGAAATTGGAGGATATGCCCTTCCAAAGGGAACATGGGTGTGGCTGGCACCAGGAGTCCTAGCGAAGGATCCCAAGAACTTCCCGGAGCCAGAGGTATTCCGGCCGGAGCGGTTCGACCCCAACGGCGAGGAGGAGAAGAGGAGGCACCCATACGCGTTCATTCCGTTTGGGATCGGGCCAAGGGCGTGCATCGGCCAGAAGTTCTCCATCCAGGAGATCAAACTGTCAGTGATCCATCTGTACCGTAACTACGTGTTTCGGCACTCGCCCAGCATGGAGTCACCTCTCGAGTTTCAGTACTCGATCGTTTGCAACTTCAAGTACGGCGTCAAGCTTCGGGTCATCAAGAGGCACACTGCATAG
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| Protein seq | MEIISTVLGSTAEYAVTLVAMAVGLLLLGYLYEPYWKVRHVPGPVPLPFIGHLHLLAMHGPDVFTVLARKYGPVFRFHMGRQPLVMVADAELCKEVGVKKFKSIPNRSMPSAIANSLINQKGLCFTRGSRWTALRNMIISIYQPSHLASLIPTMQSCIECVSKNLDGQEDITFSDLALGFATDVIGQAAFGTDFGLSKISASSNDDDIDKIATDTSAEAKASSEFIRMHVHATTSLKMDLSGSLSIIIGQLLPFLQEPFRQVLKRIPWTADHEIDHVNLALGGQMDKIVAERAAAMERDQAAPHAQQRKDFLSVVLAARESNKSWRELLTPDYISALTYEHLLAGSATTAFTLSTVLYLVSKHPEVEEKLLREIDGFGPHDHAPTAEDLQTKFPYLDQVVKESMRFYFLSPLIARETCEQVEIGGYALPKGTWVWLAPGVLAKDPKNFPEPEVFRPERFDPNGEEEKRRHPYAFIPFGIGPRACIGQKFSIQEIKLSVIHLYRNYVFRHSPSMESPLEFQYSIVCNFKYGVKLRVIKRHTA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0701500 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g50570 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0701400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0030460 | RBH | 0.0 | 1.565878 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0030060 | SBH | 0.0 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0030430 | SBH | 0.0 | 4.106735 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0029710 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0029370 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0481700 | SBH | 0.0042725 | 0.1922575 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0029110 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0472200 | SBH | 0 | 0.256031 | 0.0147715 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0029360 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0029300 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0029560 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0029730 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0029540 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G029970 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0029660 | SBH | 0.0 | 0.000000 | 0.0 |
