Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_01g0700200 | OGI:01087470 | 14/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr01:28978119-28983863 | ||||||||
| Gene Symbol | OsSTA28 | ||||||||||
| DNA seq | GGGCTAGCATTTTGGTTGGTTCGATGGAGTCTAAATCCCCCAGTTTTTAATCTGTGAGCCGTCTCCCTGCACTCTGATGTCTGTTTCGTCTGGCTTTTGATTCCATTGTGATTAATTAGGTCATGATGTTAGATGCAAATTTGTATGTCATTGCGGATGATAATGCTGTATTGAAATGCATGGGGATTGGGGGTTCATGCAGGTAGACTCGGACGCTAGCTGGCCGGCGCAAATATGTGAGTTCTTCTGATTTTTTTTTTTTTACGTAAGAAGGTAGAGTCAGCCATTTCATCGATATAAATGAGTGTAAGGTACATGAGGAAGGGGGGTGGAGGAAAAAAAGAGAGAAAAGAGAGTAAAAGAGAGAATGTACAAAAGTTCAAAAAGTAATAATTCTGATTCAACCGAGCACCTGCATGTCTTCGAATTTAGGGGGAAAAACTAAGTGCAAACTACAGACATTTCCATCTGTGCAGCCTACTTGTTATTTCTCTGATTGCTGAATGCAAATGTGATTTGGAGGGCGGGTGGGTTGATCGGTTCCTGTGATACACAGATACTGCTACTCAAGCTTGGTCTCTTTTGTTTATTTTTATGCAGGTGACTGTGTAAAGCTGACAATAGGATGTTGACATGTTGCTGTTTAGATGACACCAGATGAAACTGTACAATTCTAGACACAATTGTGATGCCTTCTTTATTGATCTCCTTTTGTATTTGTGCGTGCATGTGTCAAACTATTGGCTAACACTAATGCTCCATGTTTAATATTCTCAAGGCCCTTATTACTTTAAAGAAAGGTACTAAACTCATCAAGTATAGCCGGAGAGGAAAACCCAAGATCCGTGCGTTCAGACTTTCTAGCGTAAGCGATAAGCCCCAAGTATGTGCCGATTGCTTGATGTCGGTGATACCAAATTTGATTATGTCCCTTTGACCTTTACGTATTGCAGGATGAAACATCTTTAATTTGGTTTTCTCACAAAAAGGAAAAGTTCCTCAGACTGTCTTCTGTCACTAAGATCATTCCTGGACAGAGAACTGTAAGTCCTCCATATCCTTAAACAACAACAGTTGCAAAAGAGCATAAACTTCCATCAAGCTGGTACCTTGCTATCCTACTAATCAACTTTTCACCAGGCTGTGTTTGGGAGGTTTTTACACCCTGAGAAGGATTATTTATCATTTTCCCTCATATTTAAAAACGGGCAACGCTCACTTGATCTGGTATGGTAAAGATAAAATTATGTAATTCACTCAATCTAAGTCCCAATCATTAGCTTATGATAAATACTTATTTTTTTTCGATTCATAGCATAGGTTGAGTCTATGATAGCATGCACTGCAGAGGACATTCCTAGTATGAACTTCTTTCTATTCTGCAGGTTTGTAAGGATCAAGCTGAAGTTGAAGTCTGGTTTTCAGCACTTGAGGGGTTAATAAGTTCATTCCGCAAAAAATCTTTGATTAACGAACACAAGGATAGAGTATCATTTTCTGAAGTGAGTTATGCTCGACCTTCCTACAGGAATTTCTGTGCCTCTGTACGCAACTATATTCATGGTTCAGTTTTGCTATACAGTTACCATTTTAGAAGGAAAAAATGACTCAAGCATCGTAGATATGCATATAACGCACAAATACCATAATACCGTAAGTTTTTTCGAGAAAAGAAATTTAGTTCAATTTATAATGAAAGTTATAGGTTTATACAGCAAAAGTAAAAGTAGGGGTTACTAGCTTACAATAATGTACATGAAACAAAAGCACCTAAACTTTAGGAGTGCAGACCCTCTAGACAAGATGGAACATAAACTTTTCCAGGATGATGAGTCCAGGCTAAGACTGCCTCAGCTCCCTACCTTTTGTTTTGCTCTGAACAATTAACTCATCCACCAAAATTCTATGATTGTTACTGAAAAAAATATATGTACATACTAAAAGCATACATCATTAAAATGTTACTTTGATCAATCTAGTTTTTAGTTATGTACTCTACTCCGCTCTGTAACATGTGGGAGCTAGGTATCCACTTTGAATCTTTTATCTATCTAGATTTTGGTTACCAACTCTTCTCCTCTTTCTATCAACTAACTCTGCTCCTCTTCGAGAATTATAAGCCCCTATATAATTAGGATGTATAGTATATTCTGAGACAGCAAGTCTTTACAAATATTCTAATATAGTGCGCCTTCCTTCTTTTTTCCAGGAAGTAACTTATTATCAAGATCGCCATTCCTATGATTCAACACTAGATATTGCTTCAAATATTTCACGCAGTTTTAACTCAGCTGGTTACTGTGGAACCAATTCATTTAGTTTCAGAAAATCAGATGTGGGATTTGATCGTCTAAATATGATAAGAACAAGTGCTGCAGACAGTAGCCGGGTTAGTATTTCTAGTGCCCTTAGTTCTTACAGTCAAGGTTCTGGAACAGATGACATAGAATCCCTTGGTGATGTTTATGTCTGGGGTGAAGTATGGACTGATGTAACCCCATCAGATGGGCACACAAGCTCTTCATGCTCAAAAGTAGATGTTTTGATCCCCAAACCTTTAGAATCTGATGTCGTGTTAGATGTTAATCAGATAGCATGTGGTACGAGACATGTAGCTCTTACTACCAGGCAAGGAGAGGTGTTTACGTGGGGTGAGGAATTTGGTGGGCGCCTAGGTCACGGAACTGATGCTGATATTAGTCGCCCCAAGCTTGTCGAGTCTTTATCACTAACCGTAGTTGATCTTATTTCATGTGGAGAATTCCATACTTGTGCTGTGACTACTTCCGGTGATCTATTCAATTGGGGGGATGGTTCTTACAATGTCGGACTGCTTGGGTGTGGCACTGAAGTTAGCTACTGGCTTCCAAAGAAAGTCTCAGGGCCCTTAGAAGGTCTTCAAGTTCTATCTGTTGCATGTGGCTCATGGCATTCTGCTTTGACCACATCAAGTGGAAAACTTTACACATTTGGTGATGGAACATTTGGTGTTCTTGGACATGGTGACCGTGAAACTTTAGCATACCCAAAAGAGGTAGAAGCCTTGAGTGGATTCAAAACGATCAAAGTTGCATGTGGAATTTGGCATTCTGCAGCAATTGTGGAGGTTACTAATCAGACAGGTGCAAATGTGATGTCTAAGAAGTTATATACCTGGGGTGATGGAGATAAGAACCGCCTTGGCCATGGGGACAAAGAGCCTAGGTTAGTTCCTAAATGTGTTCAAGCGCTTTTAGAGTACAATTTTCATCAGCTGGCTTGTGGACATAATATGACTGTTGCCCTAGCTACATCTGGTCGTGTGTTTACCATGGGTAGTTCCAGCAATGGCCAGCTTGGAAATCCAAAATCTGATGGCAAGCAGCCTTGCTTAGTTCAAGATAGATTGGCTAGTGAGTTGGTTGAAGAGATTTCATGTGGAGCTTCTCATGTTACAGTTTTGACTTCAAGAAGTGAAGTATATACATGGGGAATGGGTGCCAATGGAAGACTTGGTCATGGCGATCTCAAGGACAGGAAGAAGCCATGTCTTGTTGAAGCACTTAAAGATCGGCATGTCAAGAGTATATCATGTGGTTCAAATTTCACAACATGTATTTGCATACATAAGTGGGTATCAGGTGCAGATCAATCTGTCTGCACGGGTTGCAGGCAAGCATTTGGTTTCACTAGAAAGAGACATGATTGCTACAACTGTGGGCTGGTTCATTGTCATGCTTGCAGTTCAAGAAAAGTGTTGAAGGCTGCTCTAGCACCAACTCCAGGCAAGCCACATCGTGTGTGTGATTCATGCTTTCTAAAATTGAAAGCCGCAGAGACCGGCAGCAACAATTCTAACAGAAGAAATGCTGTTACTCGTCGCTCTATTGATGGGAGAGAGAAGCTTGAGAGGCCAGAAATAAGGCCTTCCAGGACAACAGCACCAGCGGAATCAGTCAAGTATACAGAGGTAAAAGCTGCAAGAAATGATATGAGAGCATCCCAAATTTCTTCCTTGCTACAGTTCAAAGATCTTAGCTTCTCTGCTCTTCAACCCACGGCGATGTCACCAGCTGTAACTATGTCACCTGCAGTACCTGCACTCTCAACACCATCTCCATACACAAAGAAAACAAAATCACCTGCACCTGCAATCCCGCAATTCCCTAAAACTGATATAGATAACTTGCAGAAGTCTAACGAATTGCTGAATCAAGAAATGTTGAAGCTGCAATCTCAGGCAAGAATGAAACTGCTGTTTATTCTGTACCTTGTTACAGCTAGCTATTCTGATAAACCATTGTGTTTTCAATAGGTTGATAGCTTAAAACAAAAGTGCGAGGCCCAACACGAGCAGCTTCAGATATCAGATAAGAAAACTAAAACAGTTGTCTCTATGGCCACGGAAGAATATACTAGATGCAGTGCTGTGGTCGAGTTTGTTAAATTTCTTGATAACGAGGTATAGTAAAATCCTTTTGATAATATTGTGGTTCAGATCTTGGATGTTATTAGGGTTCTTCTCTATTGAATTTATTTTCTTTACTAAATGGCTGTAGAAACAGAATATCATCCATGTTTGGAGGAATGAATCTAATGACTATTTCATGTCACCGGATACCTAATCATCCACTCTTCTGCAGCTCAATGGTATAGTGCATGAACTGCCCAGCGATGCAGCAGAAAGCTTGAAAGCCTTACAAAATCAGGTGCAGGCACTGCTGAGGGAGCAAAGAAGTCATCCTTCTGAGCTTCTAAATCCTATGGATCATGATGGTATTCAACTGTCTAGTGGTGGAAATGCATTACATGATTTTTCCAATCATAGGTCAGGAAGTACACGCTACTTGTTCATGTCACAAGATGCCAGTTCTGCAAGTGGCTCTGCCATTTCACTTACAAGTGAACCCCCTTCCCATCGTGGCATGGAACACCACGCAAAGGTTCCTAACGATTTTGTACCGAAGCATGATACTCATGGAGAAGTTCAATTAATTGAGCAGTTTGAACCTGGTGTATATGTCACACTTATCCAGCTGAAGGATGGTAGCAAAGTATTCAAGCGGGTCCGGTTCAGGTACATCTCCCTATCCATGCTGCAATCTAGATGTTAAACTGCTACATCCTTTCCATCTAAAATTTTCCGTCTCCTTAAATTTGTCGGACAGCAAGAAGAAATTTGCAGAGAATCAGGCTGAAGAATGGTGGCGGGAAAACCAAGAGCGGGTCTTCAAGAAGTACAGCCATCCGACTGTTCCTCAAACAACATCAACGAAAACAGGATCTTCTAACGAGGAAGAACATCACTCATGATCTTTAATGAGGTTTCTACAAATTGCGGAAGAAGCTTCAAATTGGTGAGACACTGTACAGCGAGTCTTGACAGGAAATTTCGACTCTCTAATTGGTTATTGCTCGGAGAAAAATACCTGCTTATGTCGAAAGTATAGGATAATTTTTATTTAGTGCCAAAACTTAGTTTAGTTACAGACCATATTAAAAGCAAGTCGGAGTTAAGTAACTCTTTTCTAGGTGAGAAATTAGTAGAGTATTGAGTATTGACTATCTGGGTCGATGTTGCGAAGGGAATGACGGAGGAAGCGGCGCTCTGGCGGGCGGCAAACTCGGCAATCCCATCATTTCTTTCACAAATCCCAGGCCATTTTGTTTCTGTCTTCCAGTATCGGCCCCCTGCTGTTTTTCGATCTTTAATTGTAAATAACTTTTATTTCTCTTAATAGAAAAAATGCGCCTGTGGCGTATTCC
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| CDS seq | ATGACACCAGATGAAACTGCCCTTATTACTTTAAAGAAAGGTACTAAACTCATCAAGTATAGCCGGAGAGGAAAACCCAAGATCCGTGCGTTCAGACTTTCTAGCGATGAAACATCTTTAATTTGGTTTTCTCACAAAAAGGAAAAGTTCCTCAGACTGTCTTCTGTCACTAAGATCATTCCTGGACAGAGAACTGCTGTGTTTGGGAGGTTTTTACACCCTGAGAAGGATTATTTATCATTTTCCCTCATATTTAAAAACGGGCAACGCTCACTTGATCTGGTTTGTAAGGATCAAGCTGAAGTTGAAGTCTGGTTTTCAGCACTTGAGGGGTTAATAAGTTCATTCCGCAAAAAATCTTTGATTAACGAACACAAGGATAGAGTATCATTTTCTGAAGAAGTAACTTATTATCAAGATCGCCATTCCTATGATTCAACACTAGATATTGCTTCAAATATTTCACGCAGTTTTAACTCAGCTGGTTACTGTGGAACCAATTCATTTAGTTTCAGAAAATCAGATGTGGGATTTGATCGTCTAAATATGATAAGAACAAGTGCTGCAGACAGTAGCCGGGTTAGTATTTCTAGTGCCCTTAGTTCTTACAGTCAAGGTTCTGGAACAGATGACATAGAATCCCTTGGTGATGTTTATGTCTGGGGTGAAGTATGGACTGATGTAACCCCATCAGATGGGCACACAAGCTCTTCATGCTCAAAAGTAGATGTTTTGATCCCCAAACCTTTAGAATCTGATGTCGTGTTAGATGTTAATCAGATAGCATGTGGTACGAGACATGTAGCTCTTACTACCAGGCAAGGAGAGGTGTTTACGTGGGGTGAGGAATTTGGTGGGCGCCTAGGTCACGGAACTGATGCTGATATTAGTCGCCCCAAGCTTGTCGAGTCTTTATCACTAACCGTAGTTGATCTTATTTCATGTGGAGAATTCCATACTTGTGCTGTGACTACTTCCGGTGATCTATTCAATTGGGGGGATGGTTCTTACAATGTCGGACTGCTTGGGTGTGGCACTGAAGTTAGCTACTGGCTTCCAAAGAAAGTCTCAGGGCCCTTAGAAGGTCTTCAAGTTCTATCTGTTGCATGTGGCTCATGGCATTCTGCTTTGACCACATCAAGTGGAAAACTTTACACATTTGGTGATGGAACATTTGGTGTTCTTGGACATGGTGACCGTGAAACTTTAGCATACCCAAAAGAGGTAGAAGCCTTGAGTGGATTCAAAACGATCAAAGTTGCATGTGGAATTTGGCATTCTGCAGCAATTGTGGAGGTTACTAATCAGACAGGTGCAAATGTGATGTCTAAGAAGTTATATACCTGGGGTGATGGAGATAAGAACCGCCTTGGCCATGGGGACAAAGAGCCTAGGTTAGTTCCTAAATGTGTTCAAGCGCTTTTAGAGTACAATTTTCATCAGCTGGCTTGTGGACATAATATGACTGTTGCCCTAGCTACATCTGGTCGTGTGTTTACCATGGGTAGTTCCAGCAATGGCCAGCTTGGAAATCCAAAATCTGATGGCAAGCAGCCTTGCTTAGTTCAAGATAGATTGGCTAGTGAGTTGGTTGAAGAGATTTCATGTGGAGCTTCTCATGTTACAGTTTTGACTTCAAGAAGTGAAGTATATACATGGGGAATGGGTGCCAATGGAAGACTTGGTCATGGCGATCTCAAGGACAGGAAGAAGCCATGTCTTGTTGAAGCACTTAAAGATCGGCATGTCAAGAGTATATCATGTGGTTCAAATTTCACAACATGTATTTGCATACATAAGTGGGTATCAGGTGCAGATCAATCTGTCTGCACGGGTTGCAGGCAAGCATTTGGTTTCACTAGAAAGAGACATGATTGCTACAACTGTGGGCTGGTTCATTGTCATGCTTGCAGTTCAAGAAAAGTGTTGAAGGCTGCTCTAGCACCAACTCCAGGCAAGCCACATCGTGTGTGTGATTCATGCTTTCTAAAATTGAAAGCCGCAGAGACCGGCAGCAACAATTCTAACAGAAGAAATGCTGTTACTCGTCGCTCTATTGATGGGAGAGAGAAGCTTGAGAGGCCAGAAATAAGGCCTTCCAGGACAACAGCACCAGCGGAATCAGTCAAGTATACAGAGGTAAAAGCTGCAAGAAATGATATGAGAGCATCCCAAATTTCTTCCTTGCTACAGTTCAAAGATCTTAGCTTCTCTGCTCTTCAACCCACGGCGATGTCACCAGCTGTAACTATGTCACCTGCAGTACCTGCACTCTCAACACCATCTCCATACACAAAGAAAACAAAATCACCTGCACCTGCAATCCCGCAATTCCCTAAAACTGATATAGATAACTTGCAGAAGTCTAACGAATTGCTGAATCAAGAAATGTTGAAGCTGCAATCTCAGGTTGATAGCTTAAAACAAAAGTGCGAGGCCCAACACGAGCAGCTTCAGATATCAGATAAGAAAACTAAAACAGTTGTCTCTATGGCCACGGAAGAATATACTAGATGCAGTGCTGTGGTCGAGTTTGTTAAATTTCTTGATAACGAGCTCAATGGTATAGTGCATGAACTGCCCAGCGATGCAGCAGAAAGCTTGAAAGCCTTACAAAATCAGGTGCAGGCACTGCTGAGGGAGCAAAGAAGTCATCCTTCTGAGCTTCTAAATCCTATGGATCATGATGGTATTCAACTGTCTAGTGGTGGAAATGCATTACATGATTTTTCCAATCATAGGTCAGGAAGTACACGCTACTTGTTCATGTCACAAGATGCCAGTTCTGCAAGTGGCTCTGCCATTTCACTTACAAGTGAACCCCCTTCCCATCGTGGCATGGAACACCACGCAAAGGTTCCTAACGATTTTGTACCGAAGCATGATACTCATGGAGAAGTTCAATTAATTGAGCAGTTTGAACCTGGTGTATATGTCACACTTATCCAGCTGAAGGATGGTAGCAAAGTATTCAAGCGGGTCCGGTTCAGCAAGAAGAAATTTGCAGAGAATCAGGCTGAAGAATGGTGGCGGGAAAACCAAGAGCGGGTCTTCAAGAAGTACAGCCATCCGACTGTTCCTCAAACAACATCAACGAAAACAGGATCTTCTAACGAGGAAGAACATCACTCATGA
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| Protein seq | MTPDETALITLKKGTKLIKYSRRGKPKIRAFRLSSDETSLIWFSHKKEKFLRLSSVTKIIPGQRTAVFGRFLHPEKDYLSFSLIFKNGQRSLDLVCKDQAEVEVWFSALEGLISSFRKKSLINEHKDRVSFSEEVTYYQDRHSYDSTLDIASNISRSFNSAGYCGTNSFSFRKSDVGFDRLNMIRTSAADSSRVSISSALSSYSQGSGTDDIESLGDVYVWGEVWTDVTPSDGHTSSSCSKVDVLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCICIHKWVSGADQSVCTGCRQAFGFTRKRHDCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFLKLKAAETGSNNSNRRNAVTRRSIDGREKLERPEIRPSRTTAPAESVKYTEVKAARNDMRASQISSLLQFKDLSFSALQPTAMSPAVTMSPAVPALSTPSPYTKKTKSPAPAIPQFPKTDIDNLQKSNELLNQEMLKLQSQVDSLKQKCEAQHEQLQISDKKTKTVVSMATEEYTRCSAVVEFVKFLDNELNGIVHELPSDAAESLKALQNQVQALLREQRSHPSELLNPMDHDGIQLSSGGNALHDFSNHRSGSTRYLFMSQDASSASGSAISLTSEPPSHRGMEHHAKVPNDFVPKHDTHGEVQLIEQFEPGVYVTLIQLKDGSKVFKRVRFSKKKFAENQAEEWWRENQERVFKKYSHPTVPQTTSTKTGSSNEEEHHS |
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| Function | PH, RCC1 and FYVE domains-containing protein 1 [UniProtKB/Swiss-Prot:Q947D2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_01g0700200 | OsNip_01t0700200-01 | Chr01 | 28978119 | 28983863 | + | RAP2018-11-26 | ||
| CDS seq | ATGACACCAGATGAAACTGCCCTTATTACTTTAAAGAAAGGTACTAAACTCATCAAGTATAGCCGGAGAGGAAAACCCAAGATCCGTGCGTTCAGACTTTCTAGCGATGAAACATCTTTAATTTGGTTTTCTCACAAAAAGGAAAAGTTCCTCAGACTGTCTTCTGTCACTAAGATCATTCCTGGACAGAGAACTGCTGTGTTTGGGAGGTTTTTACACCCTGAGAAGGATTATTTATCATTTTCCCTCATATTTAAAAACGGGCAACGCTCACTTGATCTGGTTTGTAAGGATCAAGCTGAAGTTGAAGTCTGGTTTTCAGCACTTGAGGGGTTAATAAGTTCATTCCGCAAAAAATCTTTGATTAACGAACACAAGGATAGAGTATCATTTTCTGAAGAAGTAACTTATTATCAAGATCGCCATTCCTATGATTCAACACTAGATATTGCTTCAAATATTTCACGCAGTTTTAACTCAGCTGGTTACTGTGGAACCAATTCATTTAGTTTCAGAAAATCAGATGTGGGATTTGATCGTCTAAATATGATAAGAACAAGTGCTGCAGACAGTAGCCGGGTTAGTATTTCTAGTGCCCTTAGTTCTTACAGTCAAGGTTCTGGAACAGATGACATAGAATCCCTTGGTGATGTTTATGTCTGGGGTGAAGTATGGACTGATGTAACCCCATCAGATGGGCACACAAGCTCTTCATGCTCAAAAGTAGATGTTTTGATCCCCAAACCTTTAGAATCTGATGTCGTGTTAGATGTTAATCAGATAGCATGTGGTACGAGACATGTAGCTCTTACTACCAGGCAAGGAGAGGTGTTTACGTGGGGTGAGGAATTTGGTGGGCGCCTAGGTCACGGAACTGATGCTGATATTAGTCGCCCCAAGCTTGTCGAGTCTTTATCACTAACCGTAGTTGATCTTATTTCATGTGGAGAATTCCATACTTGTGCTGTGACTACTTCCGGTGATCTATTCAATTGGGGGGATGGTTCTTACAATGTCGGACTGCTTGGGTGTGGCACTGAAGTTAGCTACTGGCTTCCAAAGAAAGTCTCAGGGCCCTTAGAAGGTCTTCAAGTTCTATCTGTTGCATGTGGCTCATGGCATTCTGCTTTGACCACATCAAGTGGAAAACTTTACACATTTGGTGATGGAACATTTGGTGTTCTTGGACATGGTGACCGTGAAACTTTAGCATACCCAAAAGAGGTAGAAGCCTTGAGTGGATTCAAAACGATCAAAGTTGCATGTGGAATTTGGCATTCTGCAGCAATTGTGGAGGTTACTAATCAGACAGGTGCAAATGTGATGTCTAAGAAGTTATATACCTGGGGTGATGGAGATAAGAACCGCCTTGGCCATGGGGACAAAGAGCCTAGGTTAGTTCCTAAATGTGTTCAAGCGCTTTTAGAGTACAATTTTCATCAGCTGGCTTGTGGACATAATATGACTGTTGCCCTAGCTACATCTGGTCGTGTGTTTACCATGGGTAGTTCCAGCAATGGCCAGCTTGGAAATCCAAAATCTGATGGCAAGCAGCCTTGCTTAGTTCAAGATAGATTGGCTAGTGAGTTGGTTGAAGAGATTTCATGTGGAGCTTCTCATGTTACAGTTTTGACTTCAAGAAGTGAAGTATATACATGGGGAATGGGTGCCAATGGAAGACTTGGTCATGGCGATCTCAAGGACAGGAAGAAGCCATGTCTTGTTGAAGCACTTAAAGATCGGCATGTCAAGAGTATATCATGTGGTTCAAATTTCACAACATGTATTTGCATACATAAGTGGGTATCAGGTGCAGATCAATCTGTCTGCACGGGTTGCAGGCAAGCATTTGGTTTCACTAGAAAGAGACATGATTGCTACAACTGTGGGCTGGTTCATTGTCATGCTTGCAGTTCAAGAAAAGTGTTGAAGGCTGCTCTAGCACCAACTCCAGGCAAGCCACATCGTGTGTGTGATTCATGCTTTCTAAAATTGAAAGCCGCAGAGACCGGCAGCAACAATTCTAACAGAAGAAATGCTGTTACTCGTCGCTCTATTGATGGGAGAGAGAAGCTTGAGAGGCCAGAAATAAGGCCTTCCAGGACAACAGCACCAGCGGAATCAGTCAAGTATACAGAGGTAAAAGCTGCAAGAAATGATATGAGAGCATCCCAAATTTCTTCCTTGCTACAGTTCAAAGATCTTAGCTTCTCTGCTCTTCAACCCACGGCGATGTCACCAGCTGTAACTATGTCACCTGCAGTACCTGCACTCTCAACACCATCTCCATACACAAAGAAAACAAAATCACCTGCACCTGCAATCCCGCAATTCCCTAAAACTGATATAGATAACTTGCAGAAGTCTAACGAATTGCTGAATCAAGAAATGTTGAAGCTGCAATCTCAGGTTGATAGCTTAAAACAAAAGTGCGAGGCCCAACACGAGCAGCTTCAGATATCAGATAAGAAAACTAAAACAGTTGTCTCTATGGCCACGGAAGAATATACTAGATGCAGTGCTGTGGTCGAGTTTGTTAAATTTCTTGATAACGAGCTCAATGGTATAGTGCATGAACTGCCCAGCGATGCAGCAGAAAGCTTGAAAGCCTTACAAAATCAGGTGCAGGCACTGCTGAGGGAGCAAAGAAGTCATCCTTCTGAGCTTCTAAATCCTATGGATCATGATGGTATTCAACTGTCTAGTGGTGGAAATGCATTACATGATTTTTCCAATCATAGGTCAGGAAGTACACGCTACTTGTTCATGTCACAAGATGCCAGTTCTGCAAGTGGCTCTGCCATTTCACTTACAAGTGAACCCCCTTCCCATCGTGGCATGGAACACCACGCAAAGGTTCCTAACGATTTTGTACCGAAGCATGATACTCATGGAGAAGTTCAATTAATTGAGCAGTTTGAACCTGGTGTATATGTCACACTTATCCAGCTGAAGGATGGTAGCAAAGTATTCAAGCGGGTCCGGTTCAGCAAGAAGAAATTTGCAGAGAATCAGGCTGAAGAATGGTGGCGGGAAAACCAAGAGCGGGTCTTCAAGAAGTACAGCCATCCGACTGTTCCTCAAACAACATCAACGAAAACAGGATCTTCTAACGAGGAAGAACATCACTCATGA
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| Protein seq | MTPDETALITLKKGTKLIKYSRRGKPKIRAFRLSSDETSLIWFSHKKEKFLRLSSVTKIIPGQRTAVFGRFLHPEKDYLSFSLIFKNGQRSLDLVCKDQAEVEVWFSALEGLISSFRKKSLINEHKDRVSFSEEVTYYQDRHSYDSTLDIASNISRSFNSAGYCGTNSFSFRKSDVGFDRLNMIRTSAADSSRVSISSALSSYSQGSGTDDIESLGDVYVWGEVWTDVTPSDGHTSSSCSKVDVLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCICIHKWVSGADQSVCTGCRQAFGFTRKRHDCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFLKLKAAETGSNNSNRRNAVTRRSIDGREKLERPEIRPSRTTAPAESVKYTEVKAARNDMRASQISSLLQFKDLSFSALQPTAMSPAVTMSPAVPALSTPSPYTKKTKSPAPAIPQFPKTDIDNLQKSNELLNQEMLKLQSQVDSLKQKCEAQHEQLQISDKKTKTVVSMATEEYTRCSAVVEFVKFLDNELNGIVHELPSDAAESLKALQNQVQALLREQRSHPSELLNPMDHDGIQLSSGGNALHDFSNHRSGSTRYLFMSQDASSASGSAISLTSEPPSHRGMEHHAKVPNDFVPKHDTHGEVQLIEQFEPGVYVTLIQLKDGSKVFKRVRFSKKKFAENQAEEWWRENQERVFKKYSHPTVPQTTSTKTGSSNEEEHHS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 1.375474 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0545200 | RBH | 0.0 | 0.065903 | 1.227205 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g50470 | RBH | 0.0 | 0.0 | 0.353599 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0700200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0030420 | RBH | 0.000000 | 0.0 | 3.376628 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0030040 | RBH | 0.0 | 0.000000 | 2.140231 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0030390 | RBH | 0.0 | 0.0 | 4.818501 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0029660 | RBH | 0.0 | 0.017940 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0029330 | RBH | 0.000000 | 1.986251 | 5.508195 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0481300 | SBH | 0.7374035 | 0.599998 | 0.775629 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0029060 | RBH | 0.0 | 0.0 | 1.893793 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0432900 | SBH | 0 | 0.0091015 | 0.0659925 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0029310 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0029250 | RBH | 0.055291 | 0.918806 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0029510 | RBH | 0.0 | 1.920388 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0029680 | RBH | 0.122714 | 0.063610 | 0.489008 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0029490 | RBH | 0.031578 | 1.174770 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G029920 | RBH | 0.0 | 0.0 | 1.915412 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0029610 | RBH | 0.000000 | 0.0 | 5.676019 |
