Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_12g0018650 | OGI:12064520 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr12:23090711-23098141 | ||||||||
| Gene Symbol | WAKL21.2, OsWAKL21.2, OsWAKL21 | ||||||||||
| DNA seq | gtccccagtggctgaaacattaggctcgcttgccgagttagctaagctacctctcaagtatagtctagtagctagagatgcgcctcgccggcggcttcgtcttcctcctctgcgtgcacctgttcttgattcctcccgatggggctctctcggcccccggcggcggcggcgagcggtgcaggcggcagtgcggcgggttggttgtcccctaccctctgggattctccggcagctgccccatcctgctggcctgcgtcgacgccggcaactccacggccgcgttgatcctccctggcggcggcggcggcggcaacgccacgacgacgacctcgtcgtactcgtataccgccagcaacttcaacgccagcaggtcgacgttcgtcgtcgccctcccgccgtcctgcagccgcaccgtctccgaggcgaggcggtggctctctggcgccaactacggcgtgtcgtcgcgcaccggcctgttcctccgcggcgactgccatagaaacagcagcgcctcgaacgccaccaactgcagcatccccgccgaaaccatgtccaggatggtccccacggcgagctgcggcgccgaaggcaacacaaccgcgtcggcgctgacttgcgtcacgtcgacctcgccggcgccggacccagcaaagccagagtcgtcgtcggggtcggggatagtaggcctattcgcggagtggaagaagctcgaggaacctagctgcgacaacctgctgacgtccgtgtacggtgacacacgggagggggtgttctcgctggagttctcggtggcggagatggggtggtgggtcaacgggaactgcacccacggcggcggcggcggcgacctcgcctggcggtgcgcgccgaacgcgacgtgcctcaacgtgcagacaccgaccggcgggtgggggcatcagtgcaagtgcctgcacgggatggtcggcgacgggttcgccgccggcgagggatgctactttgccggtgagtcctctcctgatacatctcctctctaagctttcgagcggtgtaggtgagtgggccccactccccagcgttccacgtcagcagcactcgcgaaagtcgttgctgcggtcaatcacgcgcgagctaatctaatcatgtactagttcacagtttcgcacctaaagctagctgacagagtgacagtggagtgcattttatagaaaacgttaaggttaaatttagttgatcgatttggaaaagaaattttaaaataagttcaaggagccgtaaaatttttgtgagagaaatactttaaaaagaactgtgaggaaaatacctgacaaatttgtagagctataggtgtgagattttcaaaaatggcgatttgattaatttgatcaacagaaattgtttgcaaaaaaatatgattgtcaactagtcatacttttgacacgatgcatctgatgatgctgatgcctacggtgataaatagccacatctcacgtcaaaaaaaataaataaatagccacatcaaactctttgacctgccattatttctttttgggagaaaccaccaatttttctagcatggcttctcacatttgaattcaacctgctaggctgctacatcataggtcgattactcgttctttaatatgtcgacagtacagcatctacatatttgatcattttgcttttaatcatgtgttcagaaaagtatttaaaatattaatgtgtatatttttttacaaatatctactagaaaatcttataatatgaaacggaggaagtaactactaattctattttcatatattgaactataatttttgtttggtttcaaaatttaactgcatgttttgtacgcgtctattaatgaacgagaaaagtaacttgccaaaaaaaatgagttaacattaaaaatcgacctagcttaaagttaagactcgagccagcctccatcaatttgtgaagagctcggcctaaaatggaaagaagtgttgtggcccatgggcactccatgacccagtctctgtataaagatgtctaaagatcagttcaaacctcaaggttgggatgttattccctctacaccgaaaaggcgaaaacgagtaattaacctgtttggtagaggtccaacttctaaatttagctttaggagttagatctatagtggagttatgtagctgcctaaacctagctccacatctctaattcattttgtaagagagctccatccaactctgctcctatttttagtggagctgaaactgtttggatgagctccaggctatgccaaacaggctctaattaagtattagctaaagacttgaaaatatatatttagaacaactttcctttataattcttttaaaaataatatcgtttagcagttttggaagtaagcgcgtgaaaaatgagagagtagttgttatagtaaaatagtgaagacaaaataaaaaataagacaaagttccttgtgcgcctcctagagtttctctttacctccttaatcatatccttacatgtccttaaatttttattttgatctattttatatttactctcatgatcctaagttaacagttatattattctttttcaagacaaagaggttttaagttaaccattagttttttttctcaagataaagaggtattccacccatcccattaaaaaaaatcaatcctaactatgaatgtgagtacatatgtgttaagtttcgtagctaggattaaatttggggtttttcttgaacggaaggtgtagaagcttggcccatggaattaccttccatattgcccctccctcgtgtagtaaaagaaaagtaaaatgagagcaaaaatggtactcacaaggatatggtcgttcttaaaattacgtactctctagattgaccatgttttgcttgactaatcaaagctttagccaccgcaaccccaggtccattcaaacatttcaacatatatgctccagccaattccttcccggtggctgaaatattagtttcgctcgcctgccgagctagccaaactcaagatgcacctcgccggcggccgcctcctcctcctcctctgcgtcggcgtgcaattcctcttgattctcccctatggagctctctccgccagccccgccgccgccgccaccggcggagatgagcggtgcaggaggaagtgcggtgggttggatgtcccctaccctttcggcttctccggcgactgccccatcctgctggcctgcgacgagggcaactccacggcggcgctgctccgcccgaccaacggcacgtcgacgaccatggagccgttgtcgtacgccgtcgtcggcaagtcgttcaactcgaccgcctccaccttcgtcgtctccctcctgccttcctgcaaccgcaccgtctccgacgcgaggctgtggctcaccggcgccaactacggcgtgtcgtcgagcaccggcctgttcgtccgcggctgtcagaacgcgaagaacaacagctgcagcgtccccgccgaagccatgtcctcgatgctcaccacagcgaagtgcggcggcggcggcggcggcaacggaaccgcgtcgtcgccggtgacgtgcatcccgacgatgtcgacggaggcggacatggcgaagggtgtgggcctgttcgcgcagtgggacaaggtcgaggagcctagatgcgacaacctgctgacatccgtgtacggcgagacgacgaacgatggggtgttcacgctggagatcgccgtggcggagatggggtggtgggtcaacgggaactgcagcaaccacagcgccgccgccgctgacctcgtcgggctgtgcgcggcgaacgcgacgtgccacgacgtgcggaccccgagcggggcgtggggccaccagtgcaggtgtctggaggggatggacggcgacgggttcgccgccggcgaaggatgccactttcccggtgagtcctctctatagctttcggccgtcgtaggtgggtggggcccacttcccggcgctccacgtcagctccattcatgaaagtcatcggtgcggtcaatcacgcgcgagacaatctaggggctctgctttgctttggtctgtttggaatttcattggaaaagtggattgcatttttcggatttgctagaaaactttcgtatgtttttcttgtcaaaagaaattttagattcgtggcaatcggatcttctcgagatttgtacaggaagagaaaaaatattaaaaataagttttcacacatgtcacgtgtaattaagatactagtgctaactaactaaaccgtggtttaatgtaagttttatataaattatattgtagttacaatatagttataatacgattataatgcagttacattaaattatatcatagttacatctgaaagttttttactcaaaactgtagcagtattttgagatactcccacattttataattataaaattataagccgatcgatttggtaagggaagaaatgagtttcagaccaactaaagccttttattaggaacagaggaattttgctgcaatttttaagtaatgagttaatagttcagtaaaattgttgtgcttcaaaatagccttatgagagaaatagctgccgattttgtatagctgtaagcgtgcgattttcaaagatggcgactttggtttgaacaacaagaattgtctgcataaatcagcatattagtttgtcacattttgacatgatgcatctgatgataccgatcaatgcctacggcaataaatagcctcatcaaactctttgaccagaatttagttatttttagaagaaaaacaccaaattttcaagcatcagtactcaaattgaattccaccttcttttggttcagtggtctgtatttggaaaatttatctgttgaattttctcatcttaatgcatagacaattttggtgggagctatcctcacgtggagagacaattttgtcataaatcaagtcaattttgctcttaacagaaaaccaaccaactgctaccaaaaacctgatccaatttatgatgttcagcatggccaattctgcccatattttgcaaactgaaataaatatgaaggtctgaccaatttttttttctctccatttttgcagctaagaagagctctacgaagaaaatccttatcatagttggaggtaaaaaaaaaatgttactccttgccttatgcttgagttttactgttctttttaatacatgttggagtttactccgtataacgttaatctgtcacaatacagtatcgtgtacgacgctgcgtagagtcaaattgttgcgatcaagtcaagtttgtcgtaaatttttatttctacaacttacgtggaatggctgccatgcatgctgactcctgacctggaaactctaaggaaaaaaatcaagaatattctttggagcaaaaaaaaaaaaaaaacacgcccccttttgcatccaacaattctgcgtatttgtttttgccgcatgagaagattgacttacacttgggttaagcgcataattgtcatgagaatttcataagatgtacctcgtggaaaaggtcaaatttagctcgcagtaatccaaattaattagcataattacagtgaactaagtagactggaagtgtaattaggagtgtaggactaattaatctttgaccaaataactaattactcccccggttaataatacttattattttggataagagcacggtctcaaaaaaaacaaattttgaccattaTttttttattataatatatataaaagtgttaagaaatatatggttttagtaaagtactttttaaatacttttctatacatgtagttaacatatttaaaagacgaatatttttaaaataatttataatcaaatattttaaagtttaactttacctttatctaaaacaacaacgagtattatgagcggagtagcataattacagtggactggaagtgtaattaggagagtactatttaatctttgaccaactaattatcatgattgcttgggttaattaattaattaattaatttcaggtgtcttggcgggaacggtggcggccggagtgctcttcctctgctgcgcgcgttgccggcaatccggcggcggcggcggccggtccggcttcgacaggctggcggcgaagcggctgctgtcggaggcggcgtcgtcgagcggcgtgccggtgtattcgtaccacgaggtggcgcgcgccaccaactccttctcccacacgcaccgcctcggcacgggcgcctacggcacggtctacgtcggcaagctgccggcgagctcgccgtcgctggtggcgatcaagcggatgcggcggcggcacgacgacggcgacgacgacgccgccgtggcggtgctcctcaacgaggtgaagctcatctcgtcgctgagccacccgggcctcgtccgcctgctcggctgctgcctagaccgcggcgagcagatcctcgtctacgagttcgtccccaacggcacgctcgcccaccacctcgccggtggggggctcccatggcgcgcgcggctcggcgtcgcggcggagacggcggcggcgatcgcctacctgcacgccaagcggccgcccatcctccaccgcgacgtcaagtccagcaacatcctcctcgacggcgacctccgccccaggctcgccgacttcggcctctcccgcgccgtcggccgcctcgaccaggcgtcgctgtcgcacgtctcgacggcgccgcagggcacgccggggtacctcgacccggagtaccaccagaacttccacctctccgacaagagcgacgtctacagcttcggcgtcgtcctcctcgagctcatcaccgccatgaaggtcgtcgacttcgcccgccccgcggcggaggtcaacctcgcgtcgctcgcgctcgaccgcatcgggaaggggcgcgtcgacgacattgtcgacccggcgctcgtcgaccgcgccgacgagtgggtgatgcgctccgtccgccatgtcagcgagctcgcgttccggtgcctggcgttccagaaggacgtcaggccggccatgagcgaggtcgccgccgagctcgcccggatcagggacgccgcgccggcgtccgtgccgggagcccggaccggagccggcagccgcccgcccatggtgatcgacgtcggcgtcggcttcgacggcgtcgacgccgcggtgaagaaggtccggtcgccggtgtcggtgcaggacgtgtgggtcagcgaccagagctcgccgtcgaccaacggctccatgccgcgatttgcttagctctcgatttgacttgtaattcaaagaggaatctgaatttgatgtgaatttaacatttttttgatgtgtcgaaatgtgtgctacttagcctagttctaagacatggcaaagtatttcatatgccgaattgaaaaaacgtttgctgtatagctaaagttggactagcacagaaacaaaaatttcaagttgatagtttttaca
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| CDS seq | atgcgcctcgccggcggcttcgtcttcctcctctgcgtgcacctgttcttgattcctcccgatggggctctctcggcccccggcggcggcggcgagcggtgcaggcggcagtgcggcgggttggttgtcccctaccctctgggattctccggcagctgccccatcctgctggcctgcgtcgacgccggcaactccacggccgcgttgatcctccctggcggcggcggcggcggcaacgccacgacgacgacctcgtcgtactcgtataccgccagcaacttcaacgccagcaggtcgacgttcgtcgtcgccctcccgccgtcctgcagccgcaccgtctccgaggcgaggcggtggctctctggcgccaactacggcgtgtcgtcgcgcaccggcctgttcctccgcggcgactgccatagaaacagcagcgcctcgaacgccaccaactgcagcatccccgccgaaaccatgtccaggatggtccccacggcgagctgcggcgccgaaggcaacacaaccgcgtcggcgctgacttgcgtcacgtcgacctcgccggcgccggacccagcaaagccagagtcgtcgtcggggtcggggatagtaggcctattcgcggagtggaagaagctcgaggaacctagctgcgacaacctgctgacgtccgtgtacggtgacacacgggagggggtgttctcgctggagttctcggtggcggagatggggtggtgggtcaacgggaactgcacccacggcggcggcggcggcgacctcgcctggcggtgcgcgccgaacgcgacgtgcctcaacgtgcagacaccgaccggcgggtgggggcatcagtgcaagtgcctgcacgggatgatgcacctcgccggcggccgcctcctcctcctcctctgcgtcggcgtgcaattcctcttgattctcccctatggagctctctccgccagccccgccgccgccgccaccggcggagatgagcggtgcaggaggaagtgcggtgggttggatgtcccctaccctttcggcttctccggcgactgccccatcctgctggcctgcgacgagggcaactccacggcggcgctgctccgcccgaccaacggcacgtcgacgaccatggagccgttgtcgtacgccgtcgtcggcaagtcgttcaactcgaccgcctccaccttcgtcgtctccctcctgccttcctgcaaccgcaccgtctccgacgcgaggctgtggctcaccggcgccaactacggcgtgtcgtcgagcaccggcctgttcgtccgcggctgtcagaacgcgaagaacaacagctgcagcgtccccgccgaagccatgtcctcgatgctcaccacagcgaagtgcggcggcggcggcggcggcaacggaaccgcgtcgtcgccggtgacgtgcatcccgacgatgtcgacggaggcggacatggcgaagggtgtgggcctgttcgcgcagtgggacaaggtcgaggagcctagatgcgacaacctgctgacatccgtgtacggcgagacgacgaacgatggggtgttcacgctggagatcgccgtggcggagatggggtggtgggtcaacgggaactgcagcaaccacagcgccgccgccgctgacctcgtcgggctgtgcgcggcgaacgcgacgtgccacgacgtgcggaccccgagcggggcgtggggccaccagtgcaggtgtctggaggggatggacggcgacgggttcgccgccggcgaaggatgccactttcccgctaagaagagctctacgaagaaaatccttatcatagttggaggtgtcttggcgggaacggtggcggccggagtgctcttcctctgctgcgcgcgttgccggcaatccggcggcggcggcggccggtccggcttcgacaggctggcggcgaagcggctgctgtcggaggcggcgtcgtcgagcggcgtgccggtgtattcgtaccacgaggtggcgcgcgccaccaactccttctcccacacgcaccgcctcggcacgggcgcctacggcacggtctacgtcggcaagctgccggcgagctcgccgtcgctggtggcgatcaagcggatgcggcggcggcacgacgacggcgacgacgacgccgccgtggcggtgctcctcaacgaggtgaagctcatctcgtcgctgagccacccgggcctcgtccgcctgctcggctgctgcctagaccgcggcgagcagatcctcgtctacgagttcgtccccaacggcacgctcgcccaccacctcgccggtggggggctcccatggcgcgcgcggctcggcggcacgccggggtacctcgacccggagtaccaccagaacttccacctctccgacaagagcgacgtctacagcttcggcgtcgtcctcctcgagctcatcaccgccatgaaggtcgtcgacttcgcccgccccgcggcggaggtcaacctcgcgtcgctcgcgctcgaccgcatcgggaaggggcgcgtcgacgacattgtcgacccggcgctcgtcgaccgcgccgacgagtgggtgatgcgctccgtccgccatgtcagcgagctcgcgttccggtgcctggcgttccagaaggacgtcaggccggccatgagcgaggtcgccgccgagctcgcccggatcagggacgccgcgccggcgtccgtgccgggagcccggaccggagccggcagccgcccgcccatggtgatcgacgtcggcgtcggcttcgacggcgtcgacgccgcggtgaagaaggtccggtcgccggtgtcggtgcaggacgtgtgggtcagcgaccagagctcgccgtcgaccaacggctccatgccgcgatttgcttag
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| Protein seq | MRLAGGFVFLLCVHLFLIPPDGALSAPGGGGERCRRQCGGLVVPYPLGFSGSCPILLACVDAGNSTAALILPGGGGGGNATTTTSSYSYTASNFNASRSTFVVALPPSCSRTVSEARRWLSGANYGVSSRTGLFLRGDCHRNSSASNATNCSIPAETMSRMVPTASCGAEGNTTASALTCVTSTSPAPDPAKPESSSGSGIVGLFAEWKKLEEPSCDNLLTSVYGDTREGVFSLEFSVAEMGWWVNGNCTHGGGGGDLAWRCAPNATCLNVQTPTGGWGHQCKCLHGMMHLAGGRLLLLLCVGVQFLLILPYGALSASPAAAATGGDERCRRKCGGLDVPYPFGFSGDCPILLACDEGNSTAALLRPTNGTSTTMEPLSYAVVGKSFNSTASTFVVSLLPSCNRTVSDARLWLTGANYGVSSSTGLFVRGCQNAKNNSCSVPAEAMSSMLTTAKCGGGGGGNGTASSPVTCIPTMSTEADMAKGVGLFAQWDKVEEPRCDNLLTSVYGETTNDGVFTLEIAVAEMGWWVNGNCSNHSAAAADLVGLCAANATCHDVRTPSGAWGHQCRCLEGMDGDGFAAGEGCHFPAKKSSTKKILIIVGGVLAGTVAAGVLFLCCARCRQSGGGGGRSGFDRLAAKRLLSEAASSSGVPVYSYHEVARATNSFSHTHRLGTGAYGTVYVGKLPASSPSLVAIKRMRRRHDDGDDDAAVAVLLNEVKLISSLSHPGLVRLLGCCLDRGEQILVYEFVPNGTLAHHLAGGGLPWRARLGGTPGYLDPEYHQNFHLSDKSDVYSFGVVLLELITAMKVVDFARPAAEVNLASLALDRIGKGRVDDIVDPALVDRADEWVMRSVRHVSELAFRCLAFQKDVRPAMSEVAAELARIRDAAPASVPGARTGAGSRPPMVIDVGVGFDGVDAAVKKVRSPVSVQDVWVSDQSSPSTNGSMPRFA |
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| Function | Wall-associated receptor kinase-like 14 [UniProtKB/Swiss-Prot:Q8RY67] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_12g0018650 | OsNaBo_12g0018650.01 | Chr12 | 23090711 | 23098141 | + | NAM | ||
| CDS seq | atgcgcctcgccggcggcttcgtcttcctcctctgcgtgcacctgttcttgattcctcccgatggggctctctcggcccccggcggcggcggcgagcggtgcaggcggcagtgcggcgggttggttgtcccctaccctctgggattctccggcagctgccccatcctgctggcctgcgtcgacgccggcaactccacggccgcgttgatcctccctggcggcggcggcggcggcaacgccacgacgacgacctcgtcgtactcgtataccgccagcaacttcaacgccagcaggtcgacgttcgtcgtcgccctcccgccgtcctgcagccgcaccgtctccgaggcgaggcggtggctctctggcgccaactacggcgtgtcgtcgcgcaccggcctgttcctccgcggcgactgccatagaaacagcagcgcctcgaacgccaccaactgcagcatccccgccgaaaccatgtccaggatggtccccacggcgagctgcggcgccgaaggcaacacaaccgcgtcggcgctgacttgcgtcacgtcgacctcgccggcgccggacccagcaaagccagagtcgtcgtcggggtcggggatagtaggcctattcgcggagtggaagaagctcgaggaacctagctgcgacaacctgctgacgtccgtgtacggtgacacacgggagggggtgttctcgctggagttctcggtggcggagatggggtggtgggtcaacgggaactgcacccacggcggcggcggcggcgacctcgcctggcggtgcgcgccgaacgcgacgtgcctcaacgtgcagacaccgaccggcgggtgggggcatcagtgcaagtgcctgcacgggatggtcggcgacgggttcgccgccggcgagggatgctactttgccgctaagaagagctctacgaagaaaatccttatcatagttggaggtgtcttggcgggaacggtggcggccggagtgctcttcctctgctgcgcgcgttgccggcaatccggcggcggcggcggccggtccggcttcgacaggctggcggcgaagcggctgctgtcggaggcggcgtcgtcgagcggcgtgccggtgtattcgtaccacgaggtggcgcgcgccaccaactccttctcccacacgcaccgcctcggcacgggcgcctacggcacggtctacgtcggcaagctgccggcgagctcgccgtcgctggtggcgatcaagcggatgcggcggcggcacgacgacggcgacgacgacgccgccgtggcggtgctcctcaacgaggtgaagctcatctcgtcgctgagccacccgggcctcgtccgcctgctcggctgctgcctagaccgcggcgagcagatcctcgtctacgagttcgtccccaacggcacgctcgcccaccacctcgccggtggggggctcccatggcgcgcgcggctcggcgtcgcggcggagacggcggcggcgatcgcctacctgcacgccaagcggccgcccatcctccaccgcgacgtcaagtccagcaacatcctcctcgacggcgacctccgccccaggctcgccgacttcggcctctcccgcgccgtcggccgcctcgaccaggcgtcgctgtcgcacgtctcgacggcgccgcagggcacgccggggtacctcgacccggagtaccaccagaacttccacctctccgacaagagcgacgtctacagcttcggcgtcgtcctcctcgagctcatcaccgccatgaaggtcgtcgacttcgcccgccccgcggcggaggtcaacctcgcgtcgctcgcgctcgaccgcatcgggaaggggcgcgtcgacgacattgtcgacccggcgctcgtcgaccgcgccgacgagtgggtgatgcgctccgtccgccatgtcagcgagctcgcgttccggtgcctggcgttccagaaggacgtcaggccggccatgagcgaggtcgccgccgagctcgcccggatcagggacgccgcgccggcgtccgtgccgggagcccggaccggagccggcagccgcccgcccatggtgatcgacgtcggcgtcggcttcgacggcgtcgacgccgcggtgaagaaggtccggtcgccggtgtcggtgcaggacgtgtgggtcagcgaccagagctcgccgtcgaccaacggctccatgccgcgatttgcttag
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| Protein seq | MRLAGGFVFLLCVHLFLIPPDGALSAPGGGGERCRRQCGGLVVPYPLGFSGSCPILLACVDAGNSTAALILPGGGGGGNATTTTSSYSYTASNFNASRSTFVVALPPSCSRTVSEARRWLSGANYGVSSRTGLFLRGDCHRNSSASNATNCSIPAETMSRMVPTASCGAEGNTTASALTCVTSTSPAPDPAKPESSSGSGIVGLFAEWKKLEEPSCDNLLTSVYGDTREGVFSLEFSVAEMGWWVNGNCTHGGGGGDLAWRCAPNATCLNVQTPTGGWGHQCKCLHGMVGDGFAAGEGCYFAAKKSSTKKILIIVGGVLAGTVAAGVLFLCCARCRQSGGGGGRSGFDRLAAKRLLSEAASSSGVPVYSYHEVARATNSFSHTHRLGTGAYGTVYVGKLPASSPSLVAIKRMRRRHDDGDDDAAVAVLLNEVKLISSLSHPGLVRLLGCCLDRGEQILVYEFVPNGTLAHHLAGGGLPWRARLGVAAETAAAIAYLHAKRPPILHRDVKSSNILLDGDLRPRLADFGLSRAVGRLDQASLSHVSTAPQGTPGYLDPEYHQNFHLSDKSDVYSFGVVLLELITAMKVVDFARPAAEVNLASLALDRIGKGRVDDIVDPALVDRADEWVMRSVRHVSELAFRCLAFQKDVRPAMSEVAAELARIRDAAPASVPGARTGAGSRPPMVIDVGVGFDGVDAAVKKVRSPVSVQDVWVSDQSSPSTNGSMPRFA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_12g0018650 | OsNaBo_12g0018650.02 | Chr12 | 23090788 | 23097940 | + | NAM | ||
| CDS seq | atgcgcctcgccggcggcttcgtcttcctcctctgcgtgcacctgttcttgattcctcccgatggggctctctcggcccccggcggcggcggcgagcggtgcaggcggcagtgcggcgggttggttgtcccctaccctctgggattctccggcagctgccccatcctgctggcctgcgtcgacgccggcaactccacggccgcgttgatcctccctggcggcggcggcggcggcaacgccacgacgacgacctcgtcgtactcgtataccgccagcaacttcaacgccagcaggtcgacgttcgtcgtcgccctcccgccgtcctgcagccgcaccgtctccgaggcgaggcggtggctctctggcgccaactacggcgtgtcgtcgcgcaccggcctgttcctccgcggcgactgccatagaaacagcagcgcctcgaacgccaccaactgcagcatccccgccgaaaccatgtccaggatggtccccacggcgagctgcggcgccgaaggcaacacaaccgcgtcggcgctgacttgcgtcacgtcgacctcgccggcgccggacccagcaaagccagagtcgtcgtcggggtcggggatagtaggcctattcgcggagtggaagaagctcgaggaacctagctgcgacaacctgctgacgtccgtgtacggtgacacacgggagggggtgttctcgctggagttctcggtggcggagatggggtggtgggtcaacgggaactgcacccacggcggcggcggcggcgacctcgcctggcggtgcgcgccgaacgcgacgtgcctcaacgtgcagacaccgaccggcgggtgggggcatcagtgcaagtgcctgcacgggatgatgcacctcgccggcggccgcctcctcctcctcctctgcgtcggcgtgcaattcctcttgattctcccctatggagctctctccgccagccccgccgccgccgccaccggcggagatgagcggtgcaggaggaagtgcggtgggttggatgtcccctaccctttcggcttctccggcgactgccccatcctgctggcctgcgacgagggcaactccacggcggcgctgctccgcccgaccaacggcacgtcgacgaccatggagccgttgtcgtacgccgtcgtcggcaagtcgttcaactcgaccgcctccaccttcgtcgtctccctcctgccttcctgcaaccgcaccgtctccgacgcgaggctgtggctcaccggcgccaactacggcgtgtcgtcgagcaccggcctgttcgtccgcggctgtcagaacgcgaagaacaacagctgcagcgtccccgccgaagccatgtcctcgatgctcaccacagcgaagtgcggcggcggcggcggcggcaacggaaccgcgtcgtcgccggtgacgtgcatcccgacgatgtcgacggaggcggacatggcgaagggtgtgggcctgttcgcgcagtgggacaaggtcgaggagcctagatgcgacaacctgctgacatccgtgtacggcgagacgacgaacgatggggtgttcacgctggagatcgccgtggcggagatggggtggtgggtcaacgggaactgcagcaaccacagcgccgccgccgctgacctcgtcgggctgtgcgcggcgaacgcgacgtgccacgacgtgcggaccccgagcggggcgtggggccaccagtgcaggtgtctggaggggatggacggcgacgggttcgccgccggcgaaggatgccactttcccgctaagaagagctctacgaagaaaatccttatcatagttggaggtgtcttggcgggaacggtggcggccggagtgctcttcctctgctgcgcgcgttgccggcaatccggcggcggcggcggccggtccggcttcgacaggctggcggcgaagcggctgctgtcggaggcggcgtcgtcgagcggcgtgccggtgtattcgtaccacgaggtggcgcgcgccaccaactccttctcccacacgcaccgcctcggcacgggcgcctacggcacggtctacgtcggcaagctgccggcgagctcgccgtcgctggtggcgatcaagcggatgcggcggcggcacgacgacggcgacgacgacgccgccgtggcggtgctcctcaacgaggtgaagctcatctcgtcgctgagccacccgggcctcgtccgcctgctcggctgctgcctagaccgcggcgagcagatcctcgtctacgagttcgtccccaacggcacgctcgcccaccacctcgccggtggggggctcccatggcgcgcgcggctcggcggcacgccggggtacctcgacccggagtaccaccagaacttccacctctccgacaagagcgacgtctacagcttcggcgtcgtcctcctcgagctcatcaccgccatgaaggtcgtcgacttcgcccgccccgcggcggaggtcaacctcgcgtcgctcgcgctcgaccgcatcgggaaggggcgcgtcgacgacattgtcgacccggcgctcgtcgaccgcgccgacgagtgggtgatgcgctccgtccgccatgtcagcgagctcgcgttccggtgcctggcgttccagaaggacgtcaggccggccatgagcgaggtcgccgccgagctcgcccggatcagggacgccgcgccggcgtccgtgccgggagcccggaccggagccggcagccgcccgcccatggtgatcgacgtcggcgtcggcttcgacggcgtcgacgccgcggtgaagaaggtccggtcgccggtgtcggtgcaggacgtgtgggtcagcgaccagagctcgccgtcgaccaacggctccatgccgcgatttgcttag
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| Protein seq | MRLAGGFVFLLCVHLFLIPPDGALSAPGGGGERCRRQCGGLVVPYPLGFSGSCPILLACVDAGNSTAALILPGGGGGGNATTTTSSYSYTASNFNASRSTFVVALPPSCSRTVSEARRWLSGANYGVSSRTGLFLRGDCHRNSSASNATNCSIPAETMSRMVPTASCGAEGNTTASALTCVTSTSPAPDPAKPESSSGSGIVGLFAEWKKLEEPSCDNLLTSVYGDTREGVFSLEFSVAEMGWWVNGNCTHGGGGGDLAWRCAPNATCLNVQTPTGGWGHQCKCLHGMMHLAGGRLLLLLCVGVQFLLILPYGALSASPAAAATGGDERCRRKCGGLDVPYPFGFSGDCPILLACDEGNSTAALLRPTNGTSTTMEPLSYAVVGKSFNSTASTFVVSLLPSCNRTVSDARLWLTGANYGVSSSTGLFVRGCQNAKNNSCSVPAEAMSSMLTTAKCGGGGGGNGTASSPVTCIPTMSTEADMAKGVGLFAQWDKVEEPRCDNLLTSVYGETTNDGVFTLEIAVAEMGWWVNGNCSNHSAAAADLVGLCAANATCHDVRTPSGAWGHQCRCLEGMDGDGFAAGEGCHFPAKKSSTKKILIIVGGVLAGTVAAGVLFLCCARCRQSGGGGGRSGFDRLAAKRLLSEAASSSGVPVYSYHEVARATNSFSHTHRLGTGAYGTVYVGKLPASSPSLVAIKRMRRRHDDGDDDAAVAVLLNEVKLISSLSHPGLVRLLGCCLDRGEQILVYEFVPNGTLAHHLAGGGLPWRARLGGTPGYLDPEYHQNFHLSDKSDVYSFGVVLLELITAMKVVDFARPAAEVNLASLALDRIGKGRVDDIVDPALVDRADEWVMRSVRHVSELAFRCLAFQKDVRPAMSEVAAELARIRDAAPASVPGARTGAGSRPPMVIDVGVGFDGVDAAVKKVRSPVSVQDVWVSDQSSPSTNGSMPRFA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_12g0018650 | OsNaBo_12g0018650.03 | Chr12 | 23090713 | 23098140 | + | IsoSeq | ||
| CDS seq | atggcgcgcgcggctcggcgtcgcggcggagacggcggcggcgatcgcctacctgcacgccaagcggccgcccatcctccaccgcgacgtcaagtccagcaacatcctcctcgacggcgacctccgccccaggctcgccgacttcggcctctcccgcgccgtcggccgcctcgaccaggcgtcgctgtcgcacgtctcgacggcgccgcagggcacgccggggtacctcgacccggagtaccaccagaacttccacctctccgacaagagcgacgtctacagcttcggcgtcgtcctcctcgagctcatcaccgccatgaaggtcgtcgacttcgcccgccccgcggcggaggtcaacctcgcgtcgctcgcgctcgaccgcatcgggaaggggcgcgtcgacgacattgtcgacccggcgctcgtcgaccgcgccgacgagtgggtgatgcgctccgtccgccatgtcagcgagctcgcgttccggtgcctggcgttccagaaggacgtcaggccggccatgagcgaggtcgccgccgagctcgcccggatcagggacgccgcgccggcgtccgtgccgggagcccggaccggagccggcagccgcccgcccatggtgatcgacgtcggcgtcggcttcgacggcgtcgacgccgcggtgaagaaggtccggtcgccggtgtcggtgcaggacgtgtgggtcagcgaccagagctcgccgtcgaccaacggctccatgccgcgatttgcttagctctcgatttgacttgtaattcaaagaggaatctgaatttg
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| Protein seq | MARAARRRGGDGGGDRLPARQAAAHPPPRRQVQQHPPRRRPPPQARRLRPLPRRRPPRPGVAVARLDGAAGHAGVPRPGVPPELPPLRQERRLQLRRRPPRAHHRHEGRRLRPPRGGGQPRVARARPHREGARRRHCRPGARRPRRRVGDALRPPCQRARVPVPGVPEGRQAGHERGRRRARPDQGRRAGVRAGSPDRSRQPPAHGDRRRRRLRRRRRRGEEGPVAGVGAGRVGQRPELAVDQRLHAAICLALDLTCNSKRNLNL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 1.603669 | 0.961666 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0595800 | RBH | 0.493152 | 0.710144 | 4.626463 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g40419 | RBH | 0.345398 | 0.475524 | 1.217602 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0595800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0019480 | RBH | 0.066658 | 6.469046 | 2.058217 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0019590 | RBH | 0.0 | 0.734983 | 0.865140 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0019920 | RBH | 0.137578 | 0.000000 | 0.293241 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0019240 | RBH | 0.0 | 0.032230 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0018850 | RBH | 0.853566 | 3.098845 | 4.109299 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0345000 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0018720 | RBH | 0.0 | 0.000000 | 0.078045 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0363700 | RBH | 2.409672 | 6.6682275 | 2.6373295 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0018960 | RBH | 0.040730 | 0.079520 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0019190 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0019110 | RBH | 0.772118 | 3.889430 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0019140 | RBH | 0.0 | 0.0 | 0.344240 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0019320 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G018960 | RBH | 0.000000 | 0.0 | 0.952998 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
