Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_12g0003680 | OGI:12006730 | 14/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr12:2611694-2613220 | ||||||||
| Gene Symbol | CYP94C2B, OsCYP94C2b | ||||||||||
| DNA seq | ctaaacgcgtctgatcttcactgggagcccaccgctgatggacgcggtgagccccggcacgaatcttggcgcggcggcgccgccgccgccgcaccggccattctcgccgacgacctcgacgtcgaatgccctcacgacggcgacgctgaccgccttcatctcggtgatggcgagctccttgccgaggcacacgcggaggccggcctggaacaccgggtacttgaagaggctctccggcacgaacgcgccgccggcgccggtgagccaccgctccggccggaacgcgtcgcagtcggcgccccagatgcgcggcatgcggcccatggcgtaggggtggtacatgacgcgcgcgccgccgtcgacgtaggtgccgtcggggagcacgtcggcggcggcgcagaacttggagtcgaactgcaccggcgggaacagccgcatgttctcgtacagcacggcgtgggtgtagttcagccgcttcaggtgctcgtagctgacggcggcgctctcgccggcggcggcgccggcctccgcgcgcatggcggccgccacgtcggggttcttggacaggatcatgaacagagtggtgagcgcggaggacaccgtgtcccggccggcgaggaggaagctgacgacgatgtcgcggaggaacttgtcggcggcgccgcgcgcgtcgtcgccggaggaggccatgaaccgggacaggaggtcgtggctgttcgcgacgccaagcttccggcgctcccggatcatcgccgccgcgagcccgtcgatgagcttgatggccttcttgagctccctctccgacccgacgttgagaaaccgcttcatcttccacagcaacggcgacgccgccgcgccacgcatggcggacagccgcgacgcggcgtcgaacgcgtcggcgagctccgacacgggcatctcccggtcgaggcagcccgggtcgaggccgaaggagatcttgcagatggtgtcgaaggcgaagcggcggaacacgtcctgcaggtcgaccacggcgccgctgtcggcggcgttggcgagcaccggcatgaggcgggcctccacctcctgggcgacgatcttgtacgcgtaggatctcacggcgacgctccccagctcgaggctggccatcttccgctggtggcgccacgcgtcgccgtcgacgttgaagatgccgtcgccgaggaggtcgccgaggagcgcggcgaacggcctccccttggggaagttgtcgaagcgcgtcttgagcatgtactccacgttcgccgggttcgccgtgacggtgcagccgaggacgtggacgtggacggtgcccgtcggcgagcggcggagcaggtcggcgtaccagtcgctgaggttggcgaactccctcctccacgacccggccaggtaggcgcggcagacatggcagccgcaccacggccaccgcctgaggagcagtagcacgacgccgagcgccgccacgcacagcgaggacacgaagaacgccgccgccgcgcaccgcgcgccccatggcaactccacctccat
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| CDS seq | atggaggtggagttgccatggggcgcgcggtgcgcggcggcggcgttcttcgtgtcctcgctgtgcgtggcggcgctcggcgtcgtgctactgctcctcaggcggtggccgtggtgcggctgccatgtctgccgcgcctacctggccgggtcgtggaggagggagttcgccaacctcagcgactggtacgccgacctgctccgccgctcgccgacgggcaccgtccacgtccacgtcctcggctgcaccgtcacggcgaacccggcgaacgtggagtacatgctcaagacgcgcttcgacaacttccccaaggggaggccgttcgccgcgctcctcggcgacctcctcggcgacggcatcttcaacgtcgacggcgacgcgtggcgccaccagcggaagatggccagcctcgagctggggagcgtcgccgtgagatcctacgcgtacaagatcgtcgcccaggaggtggaggcccgcctcatgccggtgctcgccaacgccgccgacagcggcgccgtggtcgacctgcaggacgtgttccgccgcttcgccttcgacaccatctgcaagatctccttcggcctcgacccgggctgcctcgaccgggagatgcccgtgtcggagctcgccgacgcgttcgacgccgcgtcgcggctgtccgccatgcgtggcgcggcggcgtcgccgttgctgtggaagatgaagcggtttctcaacgtcgggtcggagagggagctcaagaaggccatcaagctcatcgacgggctcgcggcggcgatgatccgggagcgccggaagcttggcgtcgcgaacagccacgacctcctgtcccggttcatggcctcctccggcgacgacgcgcgcggcgccgccgacaagttcctccgcgacatcgtcgtcagcttcctcctcgccggccgggacacggtgtcctccgcgctcaccactctgttcatgatcctgtccaagaaccccgacgtggcggccgccatgcgcgcggaggccggcgccgccgccggcgagagcgccgccgtcagctacgagcacctgaagcggctgaactacacccacgccgtgctgtacgagaacatgcggctgttcccgccggtgcagttcgactccaagttctgcgccgccgccgacgtgctccccgacggcacctacgtcgacggcggcgcgcgcgtcatgtaccacccctacgccatgggccgcatgccgcgcatctggggcgccgactgcgacgcgttccggccggagcggtggctcaccggcgccggcggcgcgttcgtgccggagagcctcttcaagtacccggtgttccaggccggcctccgcgtgtgcctcggcaaggagctcgccatcaccgagatgaaggcggtcagcgtcgccgtcgtgagggcattcgacgtcgaggtcgtcggcgagaatggccggtgcggcggcggcggcgccgccgcgccaagattcgtgccggggctcaccgcgtccatcagcggtgggctcccagtgaagatcagacgcgtttag
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| Protein seq | MEVELPWGARCAAAAFFVSSLCVAALGVVLLLLRRWPWCGCHVCRAYLAGSWRREFANLSDWYADLLRRSPTGTVHVHVLGCTVTANPANVEYMLKTRFDNFPKGRPFAALLGDLLGDGIFNVDGDAWRHQRKMASLELGSVAVRSYAYKIVAQEVEARLMPVLANAADSGAVVDLQDVFRRFAFDTICKISFGLDPGCLDREMPVSELADAFDAASRLSAMRGAAASPLLWKMKRFLNVGSERELKKAIKLIDGLAAAMIRERRKLGVANSHDLLSRFMASSGDDARGAADKFLRDIVVSFLLAGRDTVSSALTTLFMILSKNPDVAAAMRAEAGAAAGESAAVSYEHLKRLNYTHAVLYENMRLFPPVQFDSKFCAAADVLPDGTYVDGGARVMYHPYAMGRMPRIWGADCDAFRPERWLTGAGGAFVPESLFKYPVFQAGLRVCLGKELAITEMKAVSVAVVRAFDVEVVGENGRCGGGGAAAPRFVPGLTASISGGLPVKIRRV |
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| Function | Cytochrome P450 94C1 [UniProtKB/Swiss-Prot:Q9ZUX1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_12g0003680 | OsNaBo_12g0003680.01 | Chr12 | 2611694 | 2613220 | - | NAM | ||
| CDS seq | atggaggtggagttgccatggggcgcgcggtgcgcggcggcggcgttcttcgtgtcctcgctgtgcgtggcggcgctcggcgtcgtgctactgctcctcaggcggtggccgtggtgcggctgccatgtctgccgcgcctacctggccgggtcgtggaggagggagttcgccaacctcagcgactggtacgccgacctgctccgccgctcgccgacgggcaccgtccacgtccacgtcctcggctgcaccgtcacggcgaacccggcgaacgtggagtacatgctcaagacgcgcttcgacaacttccccaaggggaggccgttcgccgcgctcctcggcgacctcctcggcgacggcatcttcaacgtcgacggcgacgcgtggcgccaccagcggaagatggccagcctcgagctggggagcgtcgccgtgagatcctacgcgtacaagatcgtcgcccaggaggtggaggcccgcctcatgccggtgctcgccaacgccgccgacagcggcgccgtggtcgacctgcaggacgtgttccgccgcttcgccttcgacaccatctgcaagatctccttcggcctcgacccgggctgcctcgaccgggagatgcccgtgtcggagctcgccgacgcgttcgacgccgcgtcgcggctgtccgccatgcgtggcgcggcggcgtcgccgttgctgtggaagatgaagcggtttctcaacgtcgggtcggagagggagctcaagaaggccatcaagctcatcgacgggctcgcggcggcgatgatccgggagcgccggaagcttggcgtcgcgaacagccacgacctcctgtcccggttcatggcctcctccggcgacgacgcgcgcggcgccgccgacaagttcctccgcgacatcgtcgtcagcttcctcctcgccggccgggacacggtgtcctccgcgctcaccactctgttcatgatcctgtccaagaaccccgacgtggcggccgccatgcgcgcggaggccggcgccgccgccggcgagagcgccgccgtcagctacgagcacctgaagcggctgaactacacccacgccgtgctgtacgagaacatgcggctgttcccgccggtgcagttcgactccaagttctgcgccgccgccgacgtgctccccgacggcacctacgtcgacggcggcgcgcgcgtcatgtaccacccctacgccatgggccgcatgccgcgcatctggggcgccgactgcgacgcgttccggccggagcggtggctcaccggcgccggcggcgcgttcgtgccggagagcctcttcaagtacccggtgttccaggccggcctccgcgtgtgcctcggcaaggagctcgccatcaccgagatgaaggcggtcagcgtcgccgtcgtgagggcattcgacgtcgaggtcgtcggcgagaatggccggtgcggcggcggcggcgccgccgcgccaagattcgtgccggggctcaccgcgtccatcagcggtgggctcccagtgaagatcagacgcgtttag
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| Protein seq | MEVELPWGARCAAAAFFVSSLCVAALGVVLLLLRRWPWCGCHVCRAYLAGSWRREFANLSDWYADLLRRSPTGTVHVHVLGCTVTANPANVEYMLKTRFDNFPKGRPFAALLGDLLGDGIFNVDGDAWRHQRKMASLELGSVAVRSYAYKIVAQEVEARLMPVLANAADSGAVVDLQDVFRRFAFDTICKISFGLDPGCLDREMPVSELADAFDAASRLSAMRGAAASPLLWKMKRFLNVGSERELKKAIKLIDGLAAAMIRERRKLGVANSHDLLSRFMASSGDDARGAADKFLRDIVVSFLLAGRDTVSSALTTLFMILSKNPDVAAAMRAEAGAAAGESAAVSYEHLKRLNYTHAVLYENMRLFPPVQFDSKFCAAADVLPDGTYVDGGARVMYHPYAMGRMPRIWGADCDAFRPERWLTGAGGAFVPESLFKYPVFQAGLRVCLGKELAITEMKAVSVAVVRAFDVEVVGENGRCGGGGAAAPRFVPGLTASISGGLPVKIRRV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 2.144603 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0150200 | RBH | 0.550658 | 0.564714 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g05440 | RBH | 0.293359 | 0.412559 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0150200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0003380 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0003610 | RBH | 0.0 | 0.0 | 0.876904 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0003620 | RBH | 0.0 | 0.0 | 3.140974 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0003450 | RBH | 0.0 | 0.071326 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0003640 | RBH | 0.0 | 0.0 | 0.682210 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0029600 | SBH | 0.015863 | 0.1671245 | 0.0055965 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0003620 | RBH | 0.0 | 0.0 | 0.336613 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0047700 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0003410 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0003620 | RBH | 0.095057 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0003640 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0003590 | RBH | 0.0 | 0.0 | 0.278704 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0003530 | RBH | 0.0 | 0.839389 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G003440 | RBH | 0.0 | 0.538719 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0003520 | RBH | 0.0 | 0.0 | 1.262733 |
