Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_12g0002700 | OGI:11006100 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr12:1883020-1884591 | ||||||||
| Gene Symbol | CYP94D5B, OsCYP94D5b | ||||||||||
| DNA seq | atcaaccagcttgctaccaagtcgatcaatggcaatggactcttactactgttccatgctcttcttcctccctccgatactctacgcctcctaccacctcacaagaatcctcgccgacaagaagaagcccaccacccatggcctcaaggcgcacccgctgctcggccacctcccggcgttcgtcaacaacagccaccgcttcctcgactggacgacggagctcatcgtcggcagcccggagatgaggatgggcttctggatccccgggatgcgcaccggcatcatcaccggcaacccggccgacgtcgagcacatcctgcgcaccaacttcgccaactatcccaagggggagcacgccattggcatgctcgaggacttcctcggacatggcctcttcaactccgacggcgagcagtggctctggcagcgcaagaacgccagctacgagttcagcaagcgctccctgcgcaggttcgtcgtcgacgtcgtgcaggccgaggtcgccgaccgcttcctcccgctgctccgccgcgccgccggtgatggtcgtggtggtgatatcgtcgtcctcgacttgcaggaagtgctccagcgattcgggtttgataccatctgtatggtggcgttcgggcacgacccgcgctgcctcgccgacggcggtgtcatggaggatgccaggtcggagtacatgcacaccttcggcgaggcgcaggacctcgtcgtcggccgcttctttgatcccatcgaggtctcctggaagatcaagaagtggctcaacgtcggcaccgagcaccgcctgaggaaggccatcgccgacgtccatgccttcgccatggacattgtccgcacacggcgccagagcgcgtccgtgcaagacagagacgacgtcttgtcgaggttcgtggcgagcgacgaggtcctccgcgacatcgtcctcagcttcctcatcgccggccgcgagacgacggcgtcggggctgagctggttcttctggttcttgtcatcccggcccgacgtcgtggcgcgcatcgccgacgaggtccgcgcggtgagggaggcgaccggcacgcgccccggcgagccgttcgggttcgacgcgctccggagatgcactaccttcacgccgcgctcaccgagtcgatgcggctgtacccgccggcgccgatcgactcgcagtcgtgcgcggcggacgacacgctccccgacggcacgctcctccgcgccggctggtcagtgacgtacagcgcgtacgccatggggcgtctcgccgccatctggagcgaggactgcttggagtacaggccggagcggtggctcggcgacgacggcgcgttccagccggcgagcccgttccggttcacggtgttccatgcggggccgaggatgtgcctcgggaaggagatggcgtacgtgcagatgaagtccatagttgcaaacgtgcttgaggagttcgaggtcgacgtcgtcaaggagatcgccggcggcggcgtgccggagcacgtgctctcggtgacgctgaggatgaagggtggactacctgtgaagattaggagaaagactgaagcttactag
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| CDS seq | atggcaatggactcttactactgttccatgctcttcttcctccctccgatactctacgcctcctaccacctcacaagaatcctcgccgacaagaagaagcccaccacccatggcctcaaggcgcacccgctgctcggccacctcccggcgttcgtcaacaacagccaccgcttcctcgactggacgacggagctcatcgtcggcagcccggagatgaggatgggcttctggatccccgggatgcgcaccggcatcatcaccggcaacccggccgacgtcgagcacatcctgcgcaccaacttcgccaactatcccaagggggagcacgccattggcatgctcgaggacttcctcggacatggcctcttcaactccgacggcgagcagtggctctggcagcgcaagaacgccagctacgagttcagcaagcgctccctgcgcaggttcgtcgtcgacgtcgtgcaggccgaggtcgccgaccgcttcctcccgctgctccgccgcgccgccggtgatggtcgtggtggtgatatcgtcgtcctcgacttgcaggaagtgctccagcgattcgggtttgataccatctgtatggtggcgttcgggcacgacccgcgctgcctcgccgacggcggtgtcatggaggatgccaggtcggagtacatgcacaccttcggcgaggcgcaggacctcgtcgtcggccgcttctttgatcccatcgaggtctcctggaagatcaagaagtggctcaacgtcggcaccgagcaccgcctgaggaaggccatcgccgacgtccatgccttcgccatggacattgtccgcacacggcgccagagcgcgtccgtgcaagacagagacgacgtcttgtcgaggttcgtggcgagcgacgaggtcctccgcgacatcgtcctcagcttcctcatcgccggccgcgagacgacggcgtcggggctgagctggttcttctggttcttgtcatcccggcccgacgtcgtggcgcgcatcgccgacgaggtccgcgcgggaggcgaccggcacgcgccccggcgagccgttcgggttcgacgcgctccggagatgcactaccttcacgccgcgctcaccgagtcgatgcggctgtacccgccggcgccgatcgactcgcagtcgtgcgcggcggacgacacgctccccgacggcacgctcctccgcgccggctggtcagtgacgtacagcgcgtacgccatggggcgtctcgccgccatctggagcgaggactgcttggagtacaggccggagcggtggctcggcgacgacggcgcgttccagccggcgagcccgttccggttcacggtgttccatgcggggccgaggatgtgcctcgggaaggagatggcgtacgtgcagatgaagtccatagttgcaaacgtgcttgaggagttcgaggtcgacgtcgtcaaggagatcgccggcggcggcgtgccggagcacgtgctctcggtgacgctgaggatgaagggtggactacctgtgaagattaggagaaagactgaagcttactag
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| Protein seq | MAMDSYYCSMLFFLPPILYASYHLTRILADKKKPTTHGLKAHPLLGHLPAFVNNSHRFLDWTTELIVGSPEMRMGFWIPGMRTGIITGNPADVEHILRTNFANYPKGEHAIGMLEDFLGHGLFNSDGEQWLWQRKNASYEFSKRSLRRFVVDVVQAEVADRFLPLLRRAAGDGRGGDIVVLDLQEVLQRFGFDTICMVAFGHDPRCLADGGVMEDARSEYMHTFGEAQDLVVGRFFDPIEVSWKIKKWLNVGTEHRLRKAIADVHAFAMDIVRTRRQSASVQDRDDVLSRFVASDEVLRDIVLSFLIAGRETTASGLSWFFWFLSSRPDVVARIADEVRAGGDRHAPRRAVRVRRAPEMHYLHAALTESMRLYPPAPIDSQSCAADDTLPDGTLLRAGWSVTYSAYAMGRLAAIWSEDCLEYRPERWLGDDGAFQPASPFRFTVFHAGPRMCLGKEMAYVQMKSIVANVLEEFEVDVVKEIAGGGVPEHVLSVTLRMKGGLPVKIRRKTEAY |
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| Function | Cytochrome P450 94A1 [UniProtKB/Swiss-Prot:O81117] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_12g0002700 | OsNaBo_12g0002700.01 | Chr12 | 1883020 | 1884591 | + | NAM | ||
| CDS seq | atggcaatggactcttactactgttccatgctcttcttcctccctccgatactctacgcctcctaccacctcacaagaatcctcgccgacaagaagaagcccaccacccatggcctcaaggcgcacccgctgctcggccacctcccggcgttcgtcaacaacagccaccgcttcctcgactggacgacggagctcatcgtcggcagcccggagatgaggatgggcttctggatccccgggatgcgcaccggcatcatcaccggcaacccggccgacgtcgagcacatcctgcgcaccaacttcgccaactatcccaagggggagcacgccattggcatgctcgaggacttcctcggacatggcctcttcaactccgacggcgagcagtggctctggcagcgcaagaacgccagctacgagttcagcaagcgctccctgcgcaggttcgtcgtcgacgtcgtgcaggccgaggtcgccgaccgcttcctcccgctgctccgccgcgccgccggtgatggtcgtggtggtgatatcgtcgtcctcgacttgcaggaagtgctccagcgattcgggtttgataccatctgtatggtggcgttcgggcacgacccgcgctgcctcgccgacggcggtgtcatggaggatgccaggtcggagtacatgcacaccttcggcgaggcgcaggacctcgtcgtcggccgcttctttgatcccatcgaggtctcctggaagatcaagaagtggctcaacgtcggcaccgagcaccgcctgaggaaggccatcgccgacgtccatgccttcgccatggacattgtccgcacacggcgccagagcgcgtccgtgcaagacagagacgacgtcttgtcgaggttcgtggcgagcgacgaggtcctccgcgacatcgtcctcagcttcctcatcgccggccgcgagacgacggcgtcggggctgagctggttcttctggttcttgtcatcccggcccgacgtcgtggcgcgcatcgccgacgaggtccgcgcgggaggcgaccggcacgcgccccggcgagccgttcgggttcgacgcgctccggagatgcactaccttcacgccgcgctcaccgagtcgatgcggctgtacccgccggcgccgatcgactcgcagtcgtgcgcggcggacgacacgctccccgacggcacgctcctccgcgccggctggtcagtgacgtacagcgcgtacgccatggggcgtctcgccgccatctggagcgaggactgcttggagtacaggccggagcggtggctcggcgacgacggcgcgttccagccggcgagcccgttccggttcacggtgttccatgcggggccgaggatgtgcctcgggaaggagatggcgtacgtgcagatgaagtccatagttgcaaacgtgcttgaggagttcgaggtcgacgtcgtcaaggagatcgccggcggcggcgtgccggagcacgtgctctcggtgacgctgaggatgaagggtggactacctgtgaagattaggagaaagactgaagcttactag
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| Protein seq | MAMDSYYCSMLFFLPPILYASYHLTRILADKKKPTTHGLKAHPLLGHLPAFVNNSHRFLDWTTELIVGSPEMRMGFWIPGMRTGIITGNPADVEHILRTNFANYPKGEHAIGMLEDFLGHGLFNSDGEQWLWQRKNASYEFSKRSLRRFVVDVVQAEVADRFLPLLRRAAGDGRGGDIVVLDLQEVLQRFGFDTICMVAFGHDPRCLADGGVMEDARSEYMHTFGEAQDLVVGRFFDPIEVSWKIKKWLNVGTEHRLRKAIADVHAFAMDIVRTRRQSASVQDRDDVLSRFVASDEVLRDIVLSFLIAGRETTASGLSWFFWFLSSRPDVVARIADEVRAGGDRHAPRRAVRVRRAPEMHYLHAALTESMRLYPPAPIDSQSCAADDTLPDGTLLRAGWSVTYSAYAMGRLAAIWSEDCLEYRPERWLGDDGAFQPASPFRFTVFHAGPRMCLGKEMAYVQMKSIVANVLEEFEVDVVKEIAGGGVPEHVLSVTLRMKGGLPVKIRRKTEAY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0134900 | RBH | 0.0 | 0.0 | 0.318250 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g04100 | SBH | 0.0 | 0.0 | 0.081924 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0134900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0002350 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0002550 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0002570 | RBH | 0.0 | 0.153700 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0002380 | RBH | 0.0 | 0.018608 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0002620 | SBH | 0.283582 | 0.000000 | 1.091615 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0029600 | SBH | 0.015863 | 0.1671245 | 0.0055965 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0002600 | SBH | 0.026328 | 0.058062 | 0.088465 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0031400 | SBH | 0.434649 | 0.339447 | 1.588629 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0002390 | SBH | 0.022344 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0002610 | SBH | 0.033014 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0002630 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0002550 | SBH | 0.000000 | 0.0 | 0.083334 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0002550 | RBH | 0.0 | 0.884919 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G002450 | SBH | 0.056754 | 0.0 | 0.128450 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0002500 | RBH | 0.0 | 0.000000 | 0.000000 |
