Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_11g0022740 | OGI:11074380 | 4/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr11:28487400-28491462 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcagTttgagttctcttcttctactCcactgagactgaggacggacggtttgggatgatgatagatgtcaccgttgatcttgagctcccgttgattttcaaaccacgaaatctcgccttcctccaccttaatcccggcggccatgctgctgtccatgttccagacgatgttcttcagctTGggagccacatcatcctcgaTttttagtttcttagtgttgTtggagacatgatcaAGCagaagaaagctgagttccttgaactcccccttcttgagggtcaccttctcttcgacgtacgattcacggccaagcttgagccatcgcaacatctccatcttgccgagctcactcagaccatcctgggtcagtacagtaggctgtgacgtagagtgatcttggagagaaactggagccctttgatccattgaggaatgctgcctcttgtgctatttcccttgaagcacttgaggttcagggtctcgagcttctcaggaggtgagaaaaactttgccacgctgccgccaatggtggagtcaacggtcacgaacccaccatcactttcaagcggcagtgtcgtgatccagattgacagggagcgcagggattcactccgcatggagattgttgtgagcaaatgcgccatgttttcttggctgccactgaggacgatgcccatcttccttagccgcttaagagacccaacacgtctaagctgggcttgggcttggcgaccgtcatcgatgatctggacatgtttcagtatctctgtgttcttCccCTAGTTTTTTAGGTATCTTCACGGTGGAGAGTTGTGCGGCGTCGACAGTGACTTCGCTGACATAGCCAGCAAAGAGATGCCTCAGCTCCTGGATCAAGATATTCCTCAGAGCATTGGCCTGCAGGCGGGTGTCTCTAATGTCGAGCGTCTCCAGATGTAGGAGGTTGTTCATCTGGCTAGGCAGCAGGAAGACATTGGTCTTCCGAAGGCTCAGATACTTGAGCGAGGGCACCAGCTCACAGATGTTTGTGAGATGGAGCATTGTTAAGCCCGTGCAACCCCCTAGATCCAGCACATGAAGCCGGTACTCTTCGGGTAGGACCTTGAGGAGCATCACCATCTCATCCATGGGAGGCAGCGGCTTGCCCGTCATCGTTGTGGTGGCCGCAAATGATACATGTCGGCAGCGGACACCACCGCCACGGTTTGTGCTGTGGGGGTTGTGGCTTCTGAGCAACTTTCGGATCTCGATCTGACGTTGAAGGTGAGTAGGCAGGTCATCGATGAAGTTGTCGCTTTTGGAGATGAATGTCTTGACTGAAGGATCCATGATGCAGCTCTTGATCTTGAGGCCGGCCGGACGAAGAGGAGGGGCAGGACGGATGAAGCCGCGAAACACGAGCTCATTGAAGTAGCGCTCACCGGCCTCTTCCATGCTGATATCATCACCACTACCATCTCGTAGCCGACCACCTTGTTGTTGTTGGTCCTTGGCCACTAGGCCTTCGGCGAGCCATCGCCGGACCAAGCATGTCCTGCTGATGCTTTTCTCCTCGCCGAAGGTGGTCAGGTACTGTAGGCAGCTCTTGTGATGTGTGGATAGCTTGCTGTAGCATAAGACCATCACATGGTGGGACATCACATTATCATGTAGTACTGCTGATCTCTCCTTCAGATTtgttaagcagctcctccagttcgagcttaagcttggtgatcccgtacggatcggcgtacacagctcggagcagcatcttagcgctgacggcatctttcctcatcatgacagtgcccatgattgttgaaacttgatctgcaacatcgagtgggagctgtttgtccatgacgtcTttttttagagttttataagcTtcaatataagccaggctgacatggccatcttcgacttgatcacatcttcgctccacttcaatggcacgtaggcctttttcaaggtgcgtcgacgccttcttcttggtcaggtacatgaggaagccgttcatgctgtcctcgtccttgatgaactggatgtcgccctgcacggtgctcagcagcttcgcctcatccTtcaccgccTtggaaaggtagcccagcaccccgtccacggcaccgttCGtcaggtgagccattatataattgctcgcttcgatctccaatagatatgcagtttaatggttggaaatactaatccattcgttagttgtaatatactccctccgtttcgaaatgtttaacaccgttaacTttttaacacatgTttgaccgttcgtcttattcaaaaaATtttgtgaaatatgtaaaATTatatatatatatatacatgaaaatataTttaacaataaatcaaatgatagaaaaataattaataattatttaacttttttgaataagatgaatggccaaacatgtgataaaaagtcaatgatgtcaaataTttcgaaacggaggaagtatgTtggaaatgggggaattgaactcgatcgaATatattggatgctaatttcagatcgatGgatcatggatgcatattTAtattgactcctcgtcggcgtagcTtttgcaattggctagctagaGgcaatatatccatcgatcgatgaaagaaaaagaccTtgtaatagggtagcgtgcaagctagctatatactatatgctgctgatcgaacaagatatgctacagctgcatataTGcatggattctacagaaagatcgatgatgctacgtacgaacagtacaagatcgatcgatcgatcaacaaaTtaattaaCctgctggccaggAaaaccaaagctgcatagagccgaatattttcctttTCctttccaaacgagctgtgaatcgaatctgTcagcttggCcatgcatgcatccgctttgcacgcacagTAtacgcaaactctcttcCAcgccaaaaaccgatcgatctttttgcacgctgtccgttagaattaatcttgtttgcacacgattttatgGTgtcataaaatttaatctcgtacatgtacatgtagctGggaacgtgatGggttcacgttgtccctgatgtcgcatgagtacgttcgcatgagactcggtgaaagcagttaggccgacattgtgtcaattggcagaGgtggatctagcatgctgtgtggtggatgttcgagCctgtggagtgatgaggaccatgggcgcccccacgatgtccTcactataaTTtttttttttttgctacatgtagataggaagaggaggttacaactttgtctatatagttgtttagaccctCcttccatttcaTttcttactggatccaCcactgtcatttgaTtgtttgtgtcTGtgTgtgtgtcgcaactcgcaacacagaaagccagacAagcgtcctcgctgatgttggtcaCcaaattaaaatcTttgtttgtgtaactcaaatttatttGttatcatgtgttgtgttcataTCtcgggtgagtctgatccttGgcaagagctgtctgtcactgtgccccgctcaattaatctatcaattgacgaagattaggtccgtacgttgagcgtccgaggcaagtatatttgaagcagagaccaaattCcccagtaaattatccgccgctcgctgccgccgttgtggtggccgaccacggcgaAGggTtggatttaattatccgagacagagagagagagagaattgcagaatggcaaccgggcggccggccgctggtgccgccacagaatgacagccatggcaatgcgcaccaaatgctggacttcggctgaatacctcgagatacccaaacgtagcgcaggCgcctctcgccgacctcgcgcacgcggtCcttgagcttgtggatcttgttggcgaggcggtggcgggCcggcacggtgcggaggcgcttggggatgtggcggatccacggccagaggccgccctccgacgggatgaggtcgcgcatgtagaggctgatgcagtcgtcgggcgaCgtaggtgacgtcgcggacctgcttcatccaggcgcggagctggtcgttgtgcGgcgtcctggacttggtgaggtggaggaggaagccgttcatgctgtccat
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| CDS seq | atggacagcatgaacggcttcctcctccacctcaccaagtccaggacgcCgcacaacgaccagctccgcgcctggatgaagcagggcggcctctggccgtggatccgccacatccccaagcgcctccgcaccgtgccgGcccgccaccgcctcgccaacaagatccacaagctcaagGaccgcgtgcgcgaggcggtgaAggatgaggcgaagctgctgagcaccgtgcagggcgacatccagttcatcaaggacgaggacagcatgaacggcttcctcatgtacctgaccaagaagaaggcgtcgacgcaccttgaaaaaggcctacgtgccattgaagtggagcgaagatgtgatcaagtcgaagatggccatAGCTGCCTACAGTACCTGACCACCTTCGGCGAGGAGAAAAGCATCAGCAGGACATGCTTGGTCCGGCGATGGCTCGCCGAAGGCCTAGTGGCCAAGGACCAACAACAACAAGGTGGTCGGCTACGAGATGGTAGTGGTGATGATATCAGCATGGAAGAGGCCGGTGAGCGCTACTTCAATGAGCTCGTGTTTCGCGGCTTCATCCGTCCTGCCCCTCCTCTTCGTCCGGCCGGCCTCAAGATCAAGAGCTGCATCATGGATCCTTCAGTCAAGACATTCATCTCCAAAAGCGACAACTTCATCGATGACCTGCCTACTCACCTTCAACGTCAGATCGAGATCCGAAAGTTGCTCAGAAGCCACAACCCCCACAGCACAAACCGTGGCGGTGGTGTCCGCTGCCGACATGTATCATTTGCGGCCACCACAACGATGACGGGCAAGCCGCTGCCTCCCATGGATGAGATGGTGATGCTCCTCAAGGTCCTACCCGAAGAGTACCGGCTTCATGTGCTGGATCTAGGGGGTTGCACGGGCTTAACAATGCTCCATCTCACAAACATCTGTGAGCTGGTGCCCTCGCTCAAGTATCTGAGCCTTCGGAAGACCAATGTCTTCCTGCTGCCTAGCCAGATGAACAACCTCCTACATCTGGAGACGCTCGACATTAGAGACACCCGCCTGCAGGCCAATGCTCTGAGGAATATCTTGATCCAGGAGCTGAGGCATCTCTTTGCTGGCTATGTCAGCGAAgatggtctgagtgagctcggcaagatggagatgttgcgatggctcaagcttggccgtgaatcgtacgtcgaagagaaggtgaccctcaagaagggggagttcaaggaactcagctttcttctGCTtgatcatgtctccaAcaacactaagaaactaaaaAtcgaggatgatgtggctccCAagctgaagaacatcgtctggaacatggacagcagcatggccgccgggattaaggtggaggaaggcgagatttcgtggtttgaaaatcaacgggagctcaagatcaacggtgacatctatcatcatcccaaaccgtccgtcctcagtctcagtgGagtagaagaagagaactcaaActga
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| Protein seq | MDSMNGFLLHLTKSRTPHNDQLRAWMKQGGLWPWIRHIPKRLRTVPARHRLANKIHKLKDRVREAVKDEAKLLSTVQGDIQFIKDEDSMNGFLMYLTKKKASTHLEKGLRAIEVERRCDQVEDGHSCLQYLTTFGEEKSISRTCLVRRWLAEGLVAKDQQQQGGRLRDGSGDDISMEEAGERYFNELVFRGFIRPAPPLRPAGLKIKSCIMDPSVKTFISKSDNFIDDLPTHLQRQIEIRKLLRSHNPHSTNRGGGVRCRHVSFAATTTMTGKPLPPMDEMVMLLKVLPEEYRLHVLDLGGCTGLTMLHLTNICELVPSLKYLSLRKTNVFLLPSQMNNLLHLETLDIRDTRLQANALRNILIQELRHLFAGYVSEDGLSELGKMEMLRWLKLGRESYVEEKVTLKKGEFKELSFLLLDHVSNNTKKLKIEDDVAPKLKNIVWNMDSSMAAGIKVEEGEISWFENQRELKINGDIYHHPKPSVLSLSGVEEENSN |
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| Function | Disease resistance protein PIK6-NP [UniProtKB/Swiss-Prot:Q2QZF1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_11g0022740 | OsNaBo_11g0022740.01 | Chr11 | 28487400 | 28491462 | - | NAM | ||
| CDS seq | atggacagcatgaacggcttcctcctccacctcaccaagtccaggacgcCgcacaacgaccagctccgcgcctggatgaagcagggcggcctctggccgtggatccgccacatccccaagcgcctccgcaccgtgccgGcccgccaccgcctcgccaacaagatccacaagctcaagGaccgcgtgcgcgaggcggtgaAggatgaggcgaagctgctgagcaccgtgcagggcgacatccagttcatcaaggacgaggacagcatgaacggcttcctcatgtacctgaccaagaagaaggcgtcgacgcaccttgaaaaaggcctacgtgccattgaagtggagcgaagatgtgatcaagtcgaagatggccatAGCTGCCTACAGTACCTGACCACCTTCGGCGAGGAGAAAAGCATCAGCAGGACATGCTTGGTCCGGCGATGGCTCGCCGAAGGCCTAGTGGCCAAGGACCAACAACAACAAGGTGGTCGGCTACGAGATGGTAGTGGTGATGATATCAGCATGGAAGAGGCCGGTGAGCGCTACTTCAATGAGCTCGTGTTTCGCGGCTTCATCCGTCCTGCCCCTCCTCTTCGTCCGGCCGGCCTCAAGATCAAGAGCTGCATCATGGATCCTTCAGTCAAGACATTCATCTCCAAAAGCGACAACTTCATCGATGACCTGCCTACTCACCTTCAACGTCAGATCGAGATCCGAAAGTTGCTCAGAAGCCACAACCCCCACAGCACAAACCGTGGCGGTGGTGTCCGCTGCCGACATGTATCATTTGCGGCCACCACAACGATGACGGGCAAGCCGCTGCCTCCCATGGATGAGATGGTGATGCTCCTCAAGGTCCTACCCGAAGAGTACCGGCTTCATGTGCTGGATCTAGGGGGTTGCACGGGCTTAACAATGCTCCATCTCACAAACATCTGTGAGCTGGTGCCCTCGCTCAAGTATCTGAGCCTTCGGAAGACCAATGTCTTCCTGCTGCCTAGCCAGATGAACAACCTCCTACATCTGGAGACGCTCGACATTAGAGACACCCGCCTGCAGGCCAATGCTCTGAGGAATATCTTGATCCAGGAGCTGAGGCATCTCTTTGCTGGCTATGTCAGCGAAgatggtctgagtgagctcggcaagatggagatgttgcgatggctcaagcttggccgtgaatcgtacgtcgaagagaaggtgaccctcaagaagggggagttcaaggaactcagctttcttctGCTtgatcatgtctccaAcaacactaagaaactaaaaAtcgaggatgatgtggctccCAagctgaagaacatcgtctggaacatggacagcagcatggccgccgggattaaggtggaggaaggcgagatttcgtggtttgaaaatcaacgggagctcaagatcaacggtgacatctatcatcatcccaaaccgtccgtcctcagtctcagtgGagtagaagaagagaactcaaActga
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| Protein seq | MDSMNGFLLHLTKSRTPHNDQLRAWMKQGGLWPWIRHIPKRLRTVPARHRLANKIHKLKDRVREAVKDEAKLLSTVQGDIQFIKDEDSMNGFLMYLTKKKASTHLEKGLRAIEVERRCDQVEDGHSCLQYLTTFGEEKSISRTCLVRRWLAEGLVAKDQQQQGGRLRDGSGDDISMEEAGERYFNELVFRGFIRPAPPLRPAGLKIKSCIMDPSVKTFISKSDNFIDDLPTHLQRQIEIRKLLRSHNPHSTNRGGGVRCRHVSFAATTTMTGKPLPPMDEMVMLLKVLPEEYRLHVLDLGGCTGLTMLHLTNICELVPSLKYLSLRKTNVFLLPSQMNNLLHLETLDIRDTRLQANALRNILIQELRHLFAGYVSEDGLSELGKMEMLRWLKLGRESYVEEKVTLKKGEFKELSFLLLDHVSNNTKKLKIEDDVAPKLKNIVWNMDSSMAAGIKVEEGEISWFENQRELKINGDIYHHPKPSVLSLSGVEEENSN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0654800 | SBH | 0.523233 | 0.178863 | 1.737872 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g43390 | SBH | 0.353206 | 0.120085 | 0.446564 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0654800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0022320 | SBH | 0.147047 | 0.0 | 1.182202 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0022460 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0022080 | SBH | 0.517148 | 0.693023 | 0.982720 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0021610 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0022070 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0389800 | SBH | 0 | 0 | 0.0243305 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0022890 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0412600 | RBH | 0 | 0 | 0.104911 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0022520 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0022680 | SBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0022380 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0021860 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0021900 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G022250 | SBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0022720 | SBH | 0.0 | 0.0 | 0.000000 |
