Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_11g0022690 | OGI:11073960 | 1/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr11:28428379-28428675 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ttaatagtggcatacaggcatctgatgttgagcatgcatatatgaatgcacgcgtgcacgtaggccatcttcttcttcttctttatcttcttctactttgacgcggagaggtggttgagaagggaaatggttgggatacgcgacatcgttgattttgagctccttcagccctgtaagattatcgatccctgaaatgttgtcagcggcgatcttcacagacgtcgtcgtcttgtccaagttccacacaatcttctctagcttgggacctgcacgggcttcgaagacaagtttggtcat |
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| CDS seq | atgaccaaacttgtcttcgaagcccgtgcaggtcccaagctagagaagattgtgtggaacttggacaagacgacgacgtctgtgaagatcgccgctgacaacatttcagggatcgataatcttacagggctgaaggagctcaaaatcaacgatgtcgcgtatcccaaccatttcccttctcaaccacctctccgcgtcaaagtagaagaagataaagaagaagaagaagatggcctacgtgcacgcgtgcattcatatatgcatgctcaacatcagatgcctgtatgccactattaa |
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| Protein seq | MTKLVFEARAGPKLEKIVWNLDKTTTSVKIAADNISGIDNLTGLKELKINDVAYPNHFPSQPPLRVKVEEDKEEEEDGLRARVHSYMHAQHQMPVCHY |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_11g0022690 | OsNaBo_11g0022690.01 | Chr11 | 28428379 | 28428675 | - | NAM | ||
| CDS seq | atgaccaaacttgtcttcgaagcccgtgcaggtcccaagctagagaagattgtgtggaacttggacaagacgacgacgtctgtgaagatcgccgctgacaacatttcagggatcgataatcttacagggctgaaggagctcaaaatcaacgatgtcgcgtatcccaaccatttcccttctcaaccacctctccgcgtcaaagtagaagaagataaagaagaagaagaagatggcctacgtgcacgcgtgcattcatatatgcatgctcaacatcagatgcctgtatgccactattaa
More
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| Protein seq | MTKLVFEARAGPKLEKIVWNLDKTTTSVKIAADNISGIDNLTGLKELKINDVAYPNHFPSQPPLRVKVEEDKEEEEDGLRARVHSYMHAQHQMPVCHY |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0653300 | SBH | 0.379680 | 0.463943 | 0.371438 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g43250 | SBH | 0.256440 | 0.311652 | 0.095497 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0653300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0022320 | SBH | 0.147047 | 0.0 | 1.182202 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0022350 | SBH | 0.039933 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0022080 | SBH | 0.517148 | 0.693023 | 0.982720 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0021570 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0022060 | SBH | 0.0 | 0.0 | 0.152510 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0389100 | SBH | 12.5966945 | 0.6453175 | 0.2384815 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0022820 | SBH | 0.000000 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0412400 | SBH | 0.060086 | 0 | 0.018343 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0022500 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0022600 | SBH | 1.295414 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0022260 | SBH | 4.020016 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0021770 | SBH | 0.668026 | 0.0 | 0.071560 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0021890 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G022110 | SBH | 0.339377 | 0.0 | 0.660719 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0022720 | SBH | 0.0 | 0.0 | 0.000000 |
