Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNaBo_11g0020980 OGI:11011170 | 1/16 NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) Chr11:26550152-26553539
Gene Symbol -
DNA seq

ttaatattgcagtgctgataacatgtttttgatggctacgatttcagtgtaaacatccttgatttttggtcgatccttgggtgatgtcatagtgcatctgaggcctagttttgccaattgcatgaaaaaccttggcgtttctacagattcgtaatttttgtcttcacccaaatgatcttcagtaagactgggttccacaatatcaccaattttgtctggaattgctgacgccaccattttgtgaaGgttcatgccatctgtaaacatctcatcagtaggatattttcctgtgatcatctctagaagaataattccatagctgtagatgtcaccctcAaatgagattttgcaccccatggcatactctgcaatatTAtgcaatggatcatgAaaaatcaatctatttGgttctcagattataaattctaaacatagctatgcagcatttatgtgaaaatagtactactatattacggatgAaATAAAATTAGAATAGTATGTACTGACCTGGTGCAATATAGCCAATTGATCCTCTTGGTCCAGCAATGCTATATGAAGTACTGCTTGCTAGTGAGGAGTCGCTATGAAGAAACTTTGCAAGCCCAAAGTCACTAACATGAGCAACCATTTCATCATCCAAAAGAACATTGCTTGGTTTAAGATCACAATGAACTAGAGGAGGAGTACATTGATTATGAAGATATTCTAATGCAGCTGCTATATCCACGGCGATTGATATTCTTGAGACTAAACTCAATGTTTCTTTTGGATTTTTTTTGTATGGTTTTGGATGGACCCAGCTTTCTAGGTTTCCATTGACCATATGCTCAAGAACAAGTGCTTTAAATTCATTTCCAGTTGGATCGAAGGTTGAACATAGGCTAATCACTCTTATAAGATTTCGATGGCGGATGTTTCTCAATGCCACACATTCAGCGATGAAATTACTTGGTGCTCCAAATTGGTCAAGTCTGAATACCTTGATAGCAACTGTGCGCACATCAGACTCAATGTGACCTCTGTATACAATTCCAAATCTCCCCGAACCAATAGTGTTTGCCGTAGAGAAACCATTTGTTGCTTTAAATAAATCATGATACGAGATATTCTTGAGCTGCTTCAATGGTTGGTTGGTGTGTTCTATGGCCTCGTATCTCTTCTTCAAAAGGATGACGCTAACACATACCAAGCTGATCAGAACAATAGTAGCAACTGGAACAGTGATAGCCAAAATGTAGGGTACCTTCTTCCTTTTAGATTGTGATTCCACACAAAGTGGTAATTGAAACATCGGAAAACTTGCACACAACTTATCATTTCCTTTCATGAACACAGCACTAGAATTTTCAAACACACCACCATTTGGAACTTTCCCATTAAGGTCATTGAATGATAGATTGAGAACCATTAAAGAGCTAAATGATCCAAAAAAATCAGGAATTTCACCGGTCAAGTTATTTTGGGAAAGATCCATCTCGATGAGGgcctcttaagttgatgaaagatcttgggatgcttccttctagaaaatttgcctccaaatgcaatgattgcaaatactggcaatcaccAagggtcgaagggatctctcctgataatcggttgtttgaaatactgagtgaatttaggttgatcaatttaccAatctccaatggtatgttcccagtaagttggttattggacaaatctaagcctatagaaagtgtggaaatggaaaaaagctcatatggaatgcttccatagaagctattagaggaaaggTttTAGTTCAAGCAAATATTTGCAACCATCTAAAGTAGCAGGGATACGACCAGTTAATCCATTTTCCATTAAATACAGGATAGTTAGCTGCTCTAGTTTCCCCATTGATTGTGGGATTTCCCCAGAAAGTTTGTTCTTAGCTAAGCTTAGGACAGATAGGTTTTGAAGATCCCCAATTGTGTCAGGAATATGCCCTGTGAGGTTATTCGATTGCAATGAAAGGGCAGTGAGGCTGGTGAGCTTTCCTATCTCTGAAGGTATATCACCGGTCAATTGGTTTTCTGTTAAGAGAAGTATCTTCAAGTTTTGTGAAAGGTTACCAATGGAACTAGGTATTTTCCCCTCAAAACCATTAAAATCCAAGCACAACATTTGTAATTGTGTACAGTTTGTTAAGGAGGAAAAGAATGTCCAATCTCCAGCTTGAAGTCTATTTGTTCCGAGGTCTAGTATTTTCAAATTTGATAAGAGTCCTAGTGAAGGAATATCACCGGTGAATGAATTACTTCGAATATCAAGATTTTGGAGGTTTGTGGAATTGGACAGAGAATTAGGGATTTGGCCTTCAAATTGGTTCCCTCCTATTATCAATTCTATGATGTTTGGAAGAGTTACACCTATGTTGGCAGGAATTGTCCCTACAAGCTTGTTATTACTGAGAATAAGATTAGTAAGAGATGAGACATTGAACAGTGCTAGGGGAACAGTGCCTGATAATTTATTATACTTCAGGTTTAATACTCTCAAATTGGTAAGTTTACTTAAGGAATCTGGAATGCTCCCTTGTAAATTATTTTGAGTAAGAAGCAGGAATGACAGCGTAGAAATGTTTCCGATTGAGGGTGGAATCTCTCCCGTCAGATTGTTTTCAGTAAGGCTAAGGAATCGTAGAGGTAAAGAGGTTTGAGAGAAAGGTGGGATAGACCCGGAAAGGTGATTGCGTGAGAGATCTATGTAAGAAAGAGTTGTGCTGTTGAATAGAGTCGGAGGggatttcaccactgatgctattgttttttagattcacctgtgtgagagacttactacctcccaaaagctcaggaatcatgccagttagtttgttgctggagagcaatatgacagaaaggttggaaagcaaaccaaacttggaagggatgcttccttgaagattattgttgctaagaacgatttgctgaaGaaatgaacattgagcaagactttgtgggatctcaccttcgagggaGttgttctgtaggctgatgaccttgaggtgagagcacgacgatatggcatatgggataactccattcaaggaattcatgctaagattgaggtatctaagtctagttaaaagaccaatgtcaggagaaatgtgcccattgagctggttgttgggcatgtgaattctggctaggaagctgagctgagcaatgcaaGgaaatatttggcctgtgaggttcagcgattcaaggttcagagagataacctgagatgcattctgtctgctacatgtcactccatgccAactgcagaacgtggaagactcatttctccaggaaactaaggctcctgatggatcagagagttgagacttgaggcagagaagggcatcccgatcagtacctgaatgcaggacaggAaacat

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CDS seq

atgttTcctgtcctgcattcaggtactgatcgggatgcccttctctgcctcaagtctcaactctctgatccatcaggagccttagtttcctggagaaatgagtcttccacgttctgcagtTggcatggagtgacatgtagcagacagaatgcatctcaggttatctctctgaaccttgaatcgctgaacctcacaggccaaatatttcCttgcattgctcagctcagcttcctagccagaattcacatgcccaacaaccagctcaatgggcacatttctcctgacattggtcttttaactagacttagatacctcaatcttagcatgaattccttgaatggagttatcccatatgccatatcgtcgtgctctcacctcaaggtcatcagcctacagaacaaCtccctcgaaggtgagatcccacaaagtcttgctcaatgttcatttCttcagcaaatcgttcttagcaacaataatcttcaaggaagcatcccttccaagtttggtttgctttccaacctttctgtcatattgctctccagcaacaaactaactggcatgattcctgagcttttgggaggtaATCTCTCACGCAATCACCTTTCCGGGTCTATCCCACCTTTCTCTCAAACCTCTTTACCTCTACGATTCCTTAGCCTTACTGAAAACAATCTGACGGGAGAGATTCCACCCTCAATCGGAAACATTTCTACGCTGTCATTCCTGCTTCTTACTCAAAATAATTTACAAGGGAGCATTCCAGATTCCTTAAGTAAACTTACCAATTTGAGAGTATTAAACCTGAAGTATAATAAATTATCAGGCACTGTTCCCCTAGCACTGTTCAATGTCTCATCTCTTACTAATCTTATTCTCAGTAATAACAAGCTTGTAGGGACAATTCCTGCCAACATAGGTGTAACTCTTCCAAACATCATAGAATTGATAATAGGAGGGAACCAATTTGAAGGCCAAATCCCTAATTCTCTGTCCAATTCCACAAACCTCCAAAATCTTGATATTCGAAGTAATTCATTCACCGGTGATATTCCTTCACTAGGACTCTTATCAAATTTGAAAATACTAGACCTCGGAACAAATAGACTTCAAGCTGGAGATTGGACATTCTTTTCCTCCTTAACAAACTGTACACAATTACAAATGTTGTGCTTGGATTTTAATGGTTTTGAGGGGAAAATACCTAGTTCCATTGGTAACCTTTCACAAAACTTGAAGATACTTCTCTTAACAGAAAACCAATTGACCGGTGATATACCTTCAGAGATAGGAAAGCTCACCAGCCTCACTGCCCTTTCATTGCAATCGAATAACCTCACAGGGCATATTCCTGACACAATTGGGGATCTTCAAAACCTATCTGTCCTAAGCTTAGCTAAGAACAAACTTTCTGGGGAAATCCCACAATCAATGGGGAAACTAGAGCAGCTAACTATCCTCTCTTTAATGGTTCTCAATCTATCATTCAATGACCTTAATGGGAAAGTTCCAAATGGTGGTGTGTTTGAAAATTCTAGTGCTGTGTTCATGAAAGGAAATGATAAGTTGTGTGCAAGTTTTCCGATGTTTCAATTACCACTTTGTGTGGAATCACAATCTAAAAGGAAGAAGGTACCCTACATTTTGGCTATCACTGTTCCAGTTGCTACTATTGTTCTGATCAGCTTGGTATGTGTTAGCGTCATCCTTTTGAAGAAGAGATACGAGGCCATAGAACACACCAACCAACCATTGAAGCAGCTCAAGAATATCTCGTATCATGATTTATTTAAAGCAACAAATGGTTTCTCTACGGCAAACACTATTGGTTCGGGGAGATTTGGAATTGTATACAGAGGTCACATTGAGTCTGATGTGCGCACAGTTGCTATCAAGGTATTCAGACTTGACCAATTTGGAGCACCAAGTAATTTCATCGCTGAATGTGTGGCATTGAGAAACATCCGCCATCGAAATCTTATAAGAGTGATTAGCCTATGTTCAACCTTCGATCCAACTGGAAATGAATTTAAAGCACTTGTTCTTGAGCATATGGTCAATGGAAACCTAGAAAGCTGGGTCCATCCAAAACCATACAAAAAAAATCCAAAAGAAACATTGAGTTTAGTCTCAAGAATATCAATCGCCGTGGATATAGCAGCTGCATTAGAATATCTTCATAATCAATGTACTCCTCCTCTAGTTCATTGTGATCTTAAACCAAGCAATGTTCTTTTGGATGATGAAATGGTTGCTCATGTTAGTGACTTTGGGCTTGCAAAGTTTCTTCATAGCGACTCCTCACTAGCAAGCAGTACTTCATATAGCATTGCTGGACCAAGAGGATCAATTGGCTATATTGCACCAGagtatgccatggggtgcaaaatctcattTgagggtgacatctacagctatggaattattcttctagagatgatcacaggaaaatatcctactgatgagatgtttacagatggcatgaacCttcacaaaatggtggcgtcagcaattccagacaaaattggtgatattgtggaacccagtcttactgaagatcatttgggtgaagacaaaaattacgaatctgtagaaacgccaaggtttttcatgcaattggcaaaactaggcctcagatgcactatgacatcacccaaggatcgaccaaaaatcaaggatgtttacactgaaatcgtagccatcaaaaacatgttatcagcactgcaatattaa

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Protein seq

MFPVLHSGTDRDALLCLKSQLSDPSGALVSWRNESSTFCSWHGVTCSRQNASQVISLNLESLNLTGQIFPCIAQLSFLARIHMPNNQLNGHISPDIGLLTRLRYLNLSMNSLNGVIPYAISSCSHLKVISLQNNSLEGEIPQSLAQCSFLQQIVLSNNNLQGSIPSKFGLLSNLSVILLSSNKLTGMIPELLGGNLSRNHLSGSIPPFSQTSLPLRFLSLTENNLTGEIPPSIGNISTLSFLLLTQNNLQGSIPDSLSKLTNLRVLNLKYNKLSGTVPLALFNVSSLTNLILSNNKLVGTIPANIGVTLPNIIELIIGGNQFEGQIPNSLSNSTNLQNLDIRSNSFTGDIPSLGLLSNLKILDLGTNRLQAGDWTFFSSLTNCTQLQMLCLDFNGFEGKIPSSIGNLSQNLKILLLTENQLTGDIPSEIGKLTSLTALSLQSNNLTGHIPDTIGDLQNLSVLSLAKNKLSGEIPQSMGKLEQLTILSLMVLNLSFNDLNGKVPNGGVFENSSAVFMKGNDKLCASFPMFQLPLCVESQSKRKKVPYILAITVPVATIVLISLVCVSVILLKKRYEAIEHTNQPLKQLKNISYHDLFKATNGFSTANTIGSGRFGIVYRGHIESDVRTVAIKVFRLDQFGAPSNFIAECVALRNIRHRNLIRVISLCSTFDPTGNEFKALVLEHMVNGNLESWVHPKPYKKNPKETLSLVSRISIAVDIAAALEYLHNQCTPPLVHCDLKPSNVLLDDEMVAHVSDFGLAKFLHSDSSLASSTSYSIAGPRGSIGYIAPEYAMGCKISFEGDIYSYGIILLEMITGKYPTDEMFTDGMNLHKMVASAIPDKIGDIVEPSLTEDHLGEDKNYESVETPRFFMQLAKLGLRCTMTSPKDRPKIKDVYTEIVAIKNMLSALQY

Function Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNaBo_11g0020980 OsNaBo_11g0020980.01 Chr11 26550152 26553539 - NAM
CDS seq

atgttTcctgtcctgcattcaggtactgatcgggatgcccttctctgcctcaagtctcaactctctgatccatcaggagccttagtttcctggagaaatgagtcttccacgttctgcagtTggcatggagtgacatgtagcagacagaatgcatctcaggttatctctctgaaccttgaatcgctgaacctcacaggccaaatatttcCttgcattgctcagctcagcttcctagccagaattcacatgcccaacaaccagctcaatgggcacatttctcctgacattggtcttttaactagacttagatacctcaatcttagcatgaattccttgaatggagttatcccatatgccatatcgtcgtgctctcacctcaaggtcatcagcctacagaacaaCtccctcgaaggtgagatcccacaaagtcttgctcaatgttcatttCttcagcaaatcgttcttagcaacaataatcttcaaggaagcatcccttccaagtttggtttgctttccaacctttctgtcatattgctctccagcaacaaactaactggcatgattcctgagcttttgggaggtaATCTCTCACGCAATCACCTTTCCGGGTCTATCCCACCTTTCTCTCAAACCTCTTTACCTCTACGATTCCTTAGCCTTACTGAAAACAATCTGACGGGAGAGATTCCACCCTCAATCGGAAACATTTCTACGCTGTCATTCCTGCTTCTTACTCAAAATAATTTACAAGGGAGCATTCCAGATTCCTTAAGTAAACTTACCAATTTGAGAGTATTAAACCTGAAGTATAATAAATTATCAGGCACTGTTCCCCTAGCACTGTTCAATGTCTCATCTCTTACTAATCTTATTCTCAGTAATAACAAGCTTGTAGGGACAATTCCTGCCAACATAGGTGTAACTCTTCCAAACATCATAGAATTGATAATAGGAGGGAACCAATTTGAAGGCCAAATCCCTAATTCTCTGTCCAATTCCACAAACCTCCAAAATCTTGATATTCGAAGTAATTCATTCACCGGTGATATTCCTTCACTAGGACTCTTATCAAATTTGAAAATACTAGACCTCGGAACAAATAGACTTCAAGCTGGAGATTGGACATTCTTTTCCTCCTTAACAAACTGTACACAATTACAAATGTTGTGCTTGGATTTTAATGGTTTTGAGGGGAAAATACCTAGTTCCATTGGTAACCTTTCACAAAACTTGAAGATACTTCTCTTAACAGAAAACCAATTGACCGGTGATATACCTTCAGAGATAGGAAAGCTCACCAGCCTCACTGCCCTTTCATTGCAATCGAATAACCTCACAGGGCATATTCCTGACACAATTGGGGATCTTCAAAACCTATCTGTCCTAAGCTTAGCTAAGAACAAACTTTCTGGGGAAATCCCACAATCAATGGGGAAACTAGAGCAGCTAACTATCCTCTCTTTAATGGTTCTCAATCTATCATTCAATGACCTTAATGGGAAAGTTCCAAATGGTGGTGTGTTTGAAAATTCTAGTGCTGTGTTCATGAAAGGAAATGATAAGTTGTGTGCAAGTTTTCCGATGTTTCAATTACCACTTTGTGTGGAATCACAATCTAAAAGGAAGAAGGTACCCTACATTTTGGCTATCACTGTTCCAGTTGCTACTATTGTTCTGATCAGCTTGGTATGTGTTAGCGTCATCCTTTTGAAGAAGAGATACGAGGCCATAGAACACACCAACCAACCATTGAAGCAGCTCAAGAATATCTCGTATCATGATTTATTTAAAGCAACAAATGGTTTCTCTACGGCAAACACTATTGGTTCGGGGAGATTTGGAATTGTATACAGAGGTCACATTGAGTCTGATGTGCGCACAGTTGCTATCAAGGTATTCAGACTTGACCAATTTGGAGCACCAAGTAATTTCATCGCTGAATGTGTGGCATTGAGAAACATCCGCCATCGAAATCTTATAAGAGTGATTAGCCTATGTTCAACCTTCGATCCAACTGGAAATGAATTTAAAGCACTTGTTCTTGAGCATATGGTCAATGGAAACCTAGAAAGCTGGGTCCATCCAAAACCATACAAAAAAAATCCAAAAGAAACATTGAGTTTAGTCTCAAGAATATCAATCGCCGTGGATATAGCAGCTGCATTAGAATATCTTCATAATCAATGTACTCCTCCTCTAGTTCATTGTGATCTTAAACCAAGCAATGTTCTTTTGGATGATGAAATGGTTGCTCATGTTAGTGACTTTGGGCTTGCAAAGTTTCTTCATAGCGACTCCTCACTAGCAAGCAGTACTTCATATAGCATTGCTGGACCAAGAGGATCAATTGGCTATATTGCACCAGagtatgccatggggtgcaaaatctcattTgagggtgacatctacagctatggaattattcttctagagatgatcacaggaaaatatcctactgatgagatgtttacagatggcatgaacCttcacaaaatggtggcgtcagcaattccagacaaaattggtgatattgtggaacccagtcttactgaagatcatttgggtgaagacaaaaattacgaatctgtagaaacgccaaggtttttcatgcaattggcaaaactaggcctcagatgcactatgacatcacccaaggatcgaccaaaaatcaaggatgtttacactgaaatcgtagccatcaaaaacatgttatcagcactgcaatattaa

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Protein seq

MFPVLHSGTDRDALLCLKSQLSDPSGALVSWRNESSTFCSWHGVTCSRQNASQVISLNLESLNLTGQIFPCIAQLSFLARIHMPNNQLNGHISPDIGLLTRLRYLNLSMNSLNGVIPYAISSCSHLKVISLQNNSLEGEIPQSLAQCSFLQQIVLSNNNLQGSIPSKFGLLSNLSVILLSSNKLTGMIPELLGGNLSRNHLSGSIPPFSQTSLPLRFLSLTENNLTGEIPPSIGNISTLSFLLLTQNNLQGSIPDSLSKLTNLRVLNLKYNKLSGTVPLALFNVSSLTNLILSNNKLVGTIPANIGVTLPNIIELIIGGNQFEGQIPNSLSNSTNLQNLDIRSNSFTGDIPSLGLLSNLKILDLGTNRLQAGDWTFFSSLTNCTQLQMLCLDFNGFEGKIPSSIGNLSQNLKILLLTENQLTGDIPSEIGKLTSLTALSLQSNNLTGHIPDTIGDLQNLSVLSLAKNKLSGEIPQSMGKLEQLTILSLMVLNLSFNDLNGKVPNGGVFENSSAVFMKGNDKLCASFPMFQLPLCVESQSKRKKVPYILAITVPVATIVLISLVCVSVILLKKRYEAIEHTNQPLKQLKNISYHDLFKATNGFSTANTIGSGRFGIVYRGHIESDVRTVAIKVFRLDQFGAPSNFIAECVALRNIRHRNLIRVISLCSTFDPTGNEFKALVLEHMVNGNLESWVHPKPYKKNPKETLSLVSRISIAVDIAAALEYLHNQCTPPLVHCDLKPSNVLLDDEMVAHVSDFGLAKFLHSDSSLASSTSYSIAGPRGSIGYIAPEYAMGCKISFEGDIYSYGIILLEMITGKYPTDEMFTDGMNLHKMVASAIPDKIGDIVEPSLTEDHLGEDKNYESVETPRFFMQLAKLGLRCTMTSPKDRPKIKDVYTEIVAIKNMLSALQY

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.174084 36.509003 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0628000 SBH 0.072616 0.552695 0.699903
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g41100 SBH 0.049595 0.375431 0.181961
Nipponbare | IRGSP 1.0 | RAP-db Os11g0628000 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0020920 SBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0020870 SBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0020730 SBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0020220 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0020760 SBH 0.0 0.000000 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0368200 SBH 0.072662 2.4256585 1.444185
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0021240 SBH 0.029835 0.049355 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0386300 SBH 0.8344205 0.750996 0.400417
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0021030 SBH 0.025546 0.074936 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0024760 SBH 0.027641 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0017710 SBH 0.429796 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0020480 SBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0020610 SBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G020560 SBH 0.000000 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0021010 RBH 0.0 0.000000 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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