Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_11g0003720 | OGI:11008210 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr11:2540931-2542309 | ||||||||
| Gene Symbol | NAC17, ONAC017, ONAC17, ONAC030, ONAC30, OsNAC111 | ||||||||||
| DNA seq | aaccatggatacaagctagctttgcttcttcttcctcgtcttcttgtaccaaatcattcaaagttttctttcttcaagccttcaatcttctatatatatctccctccatgatcaaccagctatagctacctcactccaacaatcgccgaccacgatggccaccacgaggagcggcggaggcggcgccatcagcgacccatttgcgacgccggggttccgcttctacccgacggaggaggagcttctcggcttctacctccgccaccgcctcgccggcacgaggcccgacgtcgagcgcgtcatccccgtcgtcgacgtctacggctaccacccgtcccagctcgccgccgtggccggggaggcgagcgcgcgcgacacggagcagtggttcttcttctgcccgcgcgccgagcgggagctccacggcggccggccggcgcgcaccacaccgtcggggtactggaaggccacgggatccccgtcctgcgtcatctcctccgccacaaacagggtcatcggcgtcaagcgcaccatggtgttctaccagggccgcgcccccaccggcaccaagacccgctggaagatgaacgagtacaaggccgtcgccgacgacgccgacgccgccgccgccgccacgctccacccaatggcgcctcccagggtacacacatgaactgattaatgtatgatgtgttaattagttagttaattatgtgcatgaagtgtttgatgtttgttcgagcagctgaggaacgagctgggagtgtgccgggtgtacatcagcacgggcacgctgagatcgttcgaccgccggccgctcgataatcaagcggcggcgcccacccagcagcaggtgatgccatctttgacggcggcggcggcggtgaacacgaacctctgcggcggcggcggcggcgtcgtgttcgccggtgcacaaggagacagctcccgcgactgcagctcgtcgtcggGgtcgcgagaactcgccggcggcgccgacgggtctgaagacgacgccatcgactggaactcgctcatcagtagcgccactgctgatgatctcGgcttcaacaccgtcgttggTtttgatcctagcatcgtcggatcatggccacaagtctagtgcttgattacgcgtaatatAaaattaatcgagtttagtgatcagttagttttttgtttttttgcaagaagttcaaaaattattgctgtgTgttttgcactgagtagcaaagatGggaggattagaagatgAatcgattagtttgcaaatcAGGtgaattaattagagtaattaacatctgtagtaAtagtaagtagaaaatcAaaatgagaagttgtagcagaaagTatatactaccacaaatccgttcttagtc
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| CDS seq | atggccaccacgaggagcggcggaggcggcgccatcagcgacccatttgcgacgccggggttccgcttctacccgacggaggaggagcttctcggcttctacctccgccaccgcctcgccggcacgaggcccgacgtcgagcgcgtcatccccgtcgtcgacgtctacggctaccacccgtcccagctcgccgccgtggccggggaggcgagcgcgcgcgacacggagcagtggttcttcttctgcccgcgcgccgagcgggagctccacggcggccggccggcgcgcaccacaccgtcggggtactggaaggccacgggatccccgtcctgcgtcatctcctccgccacaaacagggtcatcggcgtcaagcgcaccatggtgttctaccagggccgcgcccccaccggcaccaagacccgctggaagatgaacgagtacaaggccgtcgccgacgacgccgacgccgccgccgccgccacgctccacccaatggcgcctcccaggctgaggaacgagctgggagtgtgccgggtgtacatcagcacgggcacgctgagatcgttcgaccgccggccgctcgataatcaagcggcggcgcccacccagcagcaggtgatgccatctttgacggcggcggcggcggtgaacacgaacctctgcggcggcggcggcggcgtcgtgttcgccggtgcacaaggagacagctcccgcgactgcagctcgtcgtcggGgtcgcgagaactcgccggcggcgccgacgggtctgaagacgacgccatcgactggaactcgctcatcagtagcgccactgctgatgatctcGgcttcaacaccgtcgttggTtttgatcctagcatcgtcggatcatggccacaagtctag
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| Protein seq | MATTRSGGGGAISDPFATPGFRFYPTEEELLGFYLRHRLAGTRPDVERVIPVVDVYGYHPSQLAAVAGEASARDTEQWFFFCPRAERELHGGRPARTTPSGYWKATGSPSCVISSATNRVIGVKRTMVFYQGRAPTGTKTRWKMNEYKAVADDADAAAAATLHPMAPPRLRNELGVCRVYISTGTLRSFDRRPLDNQAAAPTQQQVMPSLTAAAAVNTNLCGGGGGVVFAGAQGDSSRDCSSSSGSRELAGGADGSEDDAIDWNSLISSATADDLGFNTVVGFDPSIVGSWPQV |
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| Function | NAC domain-containing protein 90 [UniProtKB/Swiss-Prot:Q9FMR3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_11g0003720 | OsNaBo_11g0003720.01 | Chr11 | 2540931 | 2542309 | + | NAM | ||
| CDS seq | atggccaccacgaggagcggcggaggcggcgccatcagcgacccatttgcgacgccggggttccgcttctacccgacggaggaggagcttctcggcttctacctccgccaccgcctcgccggcacgaggcccgacgtcgagcgcgtcatccccgtcgtcgacgtctacggctaccacccgtcccagctcgccgccgtggccggggaggcgagcgcgcgcgacacggagcagtggttcttcttctgcccgcgcgccgagcgggagctccacggcggccggccggcgcgcaccacaccgtcggggtactggaaggccacgggatccccgtcctgcgtcatctcctccgccacaaacagggtcatcggcgtcaagcgcaccatggtgttctaccagggccgcgcccccaccggcaccaagacccgctggaagatgaacgagtacaaggccgtcgccgacgacgccgacgccgccgccgccgccacgctccacccaatggcgcctcccaggctgaggaacgagctgggagtgtgccgggtgtacatcagcacgggcacgctgagatcgttcgaccgccggccgctcgataatcaagcggcggcgcccacccagcagcaggtgatgccatctttgacggcggcggcggcggtgaacacgaacctctgcggcggcggcggcggcgtcgtgttcgccggtgcacaaggagacagctcccgcgactgcagctcgtcgtcggGgtcgcgagaactcgccggcggcgccgacgggtctgaagacgacgccatcgactggaactcgctcatcagtagcgccactgctgatgatctcGgcttcaacaccgtcgttggTtttgatcctagcatcgtcggatcatggccacaagtctag
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| Protein seq | MATTRSGGGGAISDPFATPGFRFYPTEEELLGFYLRHRLAGTRPDVERVIPVVDVYGYHPSQLAAVAGEASARDTEQWFFFCPRAERELHGGRPARTTPSGYWKATGSPSCVISSATNRVIGVKRTMVFYQGRAPTGTKTRWKMNEYKAVADDADAAAAATLHPMAPPRLRNELGVCRVYISTGTLRSFDRRPLDNQAAAPTQQQVMPSLTAAAAVNTNLCGGGGGVVFAGAQGDSSRDCSSSSGSRELAGGADGSEDDAIDWNSLISSATADDLGFNTVVGFDPSIVGSWPQV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0154500 | RBH | 0.209656 | 0.519718 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g05614 | RBH | 0.132400 | 0.326428 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0154500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0003740 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0003830 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0003720 | RBH | 0.325210 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0003670 | RBH | 0.0 | 0.045550 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0003630 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0046400 | RBH | 0.1106695 | 18.288244 | 0.1486865 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0003720 | RBH | 0.000000 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0046600 | RBH | 0.3434595 | 15.6803825 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0003650 | RBH | 0.0 | 0.084123 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0003720 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0003720 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0003670 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0003760 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G003740 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0004060 | RBH | 0.0 | 4.264347 | 0.0 |
