Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_10g0011660 | OGI:10049650 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr10:17015175-17024214 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gcacaatattccagactattaacttctttataagataaactcgtccatacagttacacatttttcttctttcattttttttttggggattctccacagttcagacgacacaatggggatggggggcacatgaaaaagaaaaaggaaacaggtgacatttgattttcttctccgactgtttatctgatcgacctatactgtacacatactccgctgccaagcctttttatcttgcaacagcaggatgactgctatctggacaggaactggggctctaaaccaagccatgcctttgcagactattgagcccaaatgtaacggcaaaatcacaattgctctttattcacagttgctgtatgacgacctcatgggtagagtttcaccggtataacgatatttcttgcggtacataggagcccgctgtctcctgatgacaagggattactagcctttgcaatgtattcagatagctagttagctggctaaaagaagggcgcaagtttggatccctgaaagtgaaaatggtaacagagataaatcatgtattagtacaactgcaatgtaaagttaacaacaaagaatagaaggcttcatatccctcctaaccaaaacacttaaataagccttcatgtctttttttaataaaaactcacttctgccagcagtcctgtataatagatgcaactagaggatcaacctccatggggatatcaagccgtctatcctggaaaccaactgcacccacaacttgcatggggttcatgccactccatggcatttgtagtgttgctagttcccataagatgacaccaaagctgtaaacatcacacctgcaaaactctcaactacgattagctgcagttgtcaatgtgttgtctagtgtgccaacagaaataaaggccggggagaaattcaacttgaattcttcagagagaataagataatgccaatggagtcttttctctaaaaaaagataatgccaatgcataggacagatgtgatctctacaagacaatataaggtgttttgtaattgatatttagtaatggtttttactatgtgcagcaggaatagaatcatgtgccgcagtcacaccattcaatggctccctcagccatctggatagagggttcagtcagtatgaaaaaatggagcacaatcatgttgcatgacatttcaaattcatcaccctccttggcattgacatgacaggcaccagggatgaagtaaatgaatttcagaacattccatggtagatgtaattaaactaaaaattcaaattgttgtcattcttattagcagctccgcataatccacaaagcctgccatattacatttctatccagtttgtattatgtataggttgccaatatcctatttcaatttcaatgaaaatgaatgacatagatggtacgggttctagaagctaggatacgtcacacgaagctaaaaaaaatataatcaattatcaattaaccacaaaatgctccacatagagacatcgcagaatagattatattcaattaagcctaacttctgtgatggcttatctactcggacaaggtatcttatccatataggtcaaataactgcttgcattagtctatagaataaacctcattaggtagagagtgaaatttaagctcggctaaacatgtatgaagtacaggaaatttgttacagtaaatcctaagcagaaaaatattccctccatccaaaaatataacagcttctagcatttaaaatttgtcataaaacataacttctccatctagattcacttctcaaccaataacaacattttatcttttaatttctccacctacttcctcttttcaattaatcgcaacattcccctatttaatttcacctattttcttaataccggtgtccaaccccaaaacttcttatattttgggatggaggtagtagcaaataaaaacaattgaaaatggtgttaaaaatcacttacttctcatttgactgctcattccttaatacctctggtgccatccactcaggctgttaagagggggaagccacaaattttaagacagggtacatgaagctttcgacaactttaagaggaaagaatcattctagtcggaatgccaattacttacagtccctgcagtggatttggatgacaaaaatgtaccgtgcttcaaacgtgaaagtccaaaatcacagacctgtaaatgtaatttgttagctaacaacaagctttcaggctttggttctcgaaagcagatagataccttaacggtccaattattgtcaaccagcaagtttggtgattttagatcccgatgaacaattgtcggtacactagtatgaagacaattcatgcctctggcctgcagagtgaataaatcataataagggcatgcacatgatgatAaaattgaaaatacagaatccaaccattaccacatcaagggccattttaatcctgcgcttctcatcaatttggcaatcagggcgatgaataatcgtatacaagcttcccctaaaaagaaataacaatttgattaaagtcattgctgaaacacgaaccatttgatccaatactgacaaaaaaaaatgccataacactcatgttaacaggtctagcctaacctaacagagcactttgtctgtgaaaatttgaacattcatatagtatagcccccatttttttaaagctagtcagcaataacaactcgtgtttaatacaggtatcataatgagcatcttttcatttagttttagtcatgaatgcaacactgcattactacttctgtagttctgtacggctatagctggtgtcatattggactgactacacatgttatgacctactttatttgaaaacacaaacttgctatacctaggaaggtattctgatacaatggacaagtgtggaggccgtgttactgcacccataaagagtacaatatttggatgacgaagccggcgcataatcctcacctattAaaagagaattatcaaatgattcagggactacaagcggaaataacagtaataatataacattaagtttgtgaaaaatcaaaatcataaaatgttcacatacctcgcaacgaaattcagccaaagcatcaccatagaactcttgatccAaaaatttctttacagccacttcctgtaaataagtaaaatgtcacattttaattataatgatcagttgatatcaaaagaactttcttaatatcaggaaggggctccatcaaaattatttgatagcggatccctgagtacatcacagacatagaccattctttgacataggtgcacttacagttccattccaatcggcatggtatacttctccatacgaacctacaaattacaaggaaactcttttaattgtcatatatttaaagatatagcaacacaagagctcctaatgcacaaaagaaactccaaaaacacatgcttatgataggataacagtgcaattttttaaaaattattttttgcagtaatgctagtgaatatttcttacattttatgacaagggatagtgcaacctacaatcagctcaatgagtgaattagtatattacagataaaacaaaagaacagttgtgtacctaggccaatcctttcaccaattagaagatcctcccagaggatttcacattcagaaacttcgcccaacaccatgtcaacggtgcttgacccagcttggggtggagaaacagattctgagttctgccttgatgtgtccatgaatctgtctagaggggaccttcttggatcaggatgtaacctcatgttgtcatgcctatcatagttttccttgttctccttcacttctggagaatacccttgcatactactatagatttgactgtcaaatctagaatagatgggaactttttccagatcatgagggcccttttctgcaaccttcacgattccagatgtagaagctgcattcactgaagaaataccattcggtttgtcatcatagtaatgaacaggtgccaggtttggtctatccaggcgttctccagtggcagaagctgttgccgtagttgaggcaccaacttttctattgtcataattacgacctggtgctgcacataacctatcattacgctctctgccattgggattgtaatgctttgcagttgaccaggccaactgagatgacgatgcagcattgtcgctagtgtttctccgacgaactaacccctcagcaatattgtattgcttgttagaaatgtcattacaagctgaccagtttttcatcaccaatggttgttgagatcttccaggtgctggagctatattctctctacgcctttgatattcattatttctattgtttaatcccttgaatgccaatgaacttttacccggttcaatacccctgaaagaatcagtctctgaaatttgctttttagactcttcattttcttgagagtctggagttaatttcaagtcctctttctgcattgaatgtgcgccagcagaagttgattgttgatcagattgcatctgaggtgccaatgtccagagttgactaacctcacttccagctatcatggttttttcacaccctgattgattttctgacaacgaattaccattgccaaacatatgcaatcggttgcctacatgctcagaatgagctgcacttgggtcattttcaatgttacttgccaattcaaccacctgattctgcaccaacggtttagtcaagttgaatggagtaccctttgaaataaagacatctgctggaatgagtgttcctggggcagccataacatcaaccaaaaattccctacagtacaacacagaaaaaagatttaaaaaaaaaagtgggtaagaaacaaattgaagtataacatttaaagtaaaaatggatgaataagaaatttacagattattagatagtagaaatgtgattccatgaacaactaataatgcctagacatggaaatacctttcgttattcatctttacaatgttaatagcatcatcttcaacaccagtgtaatggctccctttaaccagcttgcatggaataccaacactgtcagcaagaatctgcatgaaaatgcataagaactgagagagcatgttatgattgtaagctaactgcgaagacatgtggaaaggatttcataattatgcaaaagcattatatgttctctcgtcagatttggctatctaatgttaatttcattcacacatcatactaagcattgataaataattattgctttaaacatcaagatatttacaagcctgtctacatagtgcttgcaaagtactgccaagatcaatgctaggtatcacatcatctataattatcacttaagaaggatctgaacctttattgacccacttatactagtatcagggcataaatgtgcaatcctagagtttcaagacccaaaagttcatgtgtaagtttagagagcaacagtgcactttacttataacatacgaactgatactgcattttgggcattgatgggacagtctcacagtctaatccactgtactgggcagtatggcagaatacataagatgcaccaacacatgagagaaggtaagacagtaaacagtttacaagatccaaacatactgataagatgatgcaatatgttgataaaaatatgtatataagatagtgttccacatcctcagcaaattgccgatcatcaatgcaaaaaatatggtttagatttttctttttggtggaataggcatgttaaccaataaatcaattgaaaagttggtagttgccactccacacatctgcggaaagggagagacctgaccttgaaaagtaaggcacgatgccgagacaagcctatgtcaatgcggcctataggcagcaggcttgtctgatgtgatgtcctctgctcaatgcttttgcccaaccatttcgtaaacatttcagttgcatctatcacaggaccacccatatgtcctgcaacaacttcagctattcgtcgcaccaatactgtagtatcaggacagcccaacatgcagcattgtgctacttccatcatctcctgcaaggcactatcaaacttatggtcgaccacaatcacttcaaagccaagatctccaatgctggtctgaagttctgcaagcgatggcatctttccctgcctggccgactccgcggaaagtccaaatatgtcatagaacccatctataactttctcattgtagtcaagaaagttatagtcctaaaggaagttagaatacagattagatataggactaaatagatcgcaatagctagtgccaaaacataaagaaatcagaggtggacaacctccattcaaaagtaccctaattaagcatccccaagaaattagcacgttagttggagaacaacaaagggatctgtccatccaagaatcgtgggaccagatcataatgttttagattaaacaaagagttcatgacagatacaactcgcagatattgtaaaccaatagtgtcctaaaattaagactccaaaccgactgcgacatttaatcccAaatttcgaaattattaaaccaatagaatactaaaaatgagactccaagtgaagtcaatagataattattaattccgaattttggaattattaaataatgaaacggtcaattaatactcaatgccaagtacagcttggtatatatccagaaatttagaattataggatcaaaaaaaccataaaatatatcaggtggatttttttatctacaaTtttggatttcaaaactactaattccagaaagtagcatatttatttatctaaattttgaaataattaattgaagacatagtaaatggtctgtgcgtggctgcatattttactatacacaaatttggtcttgatgattcaaaagatagcgaattggactgtatatgaacatgtaattagaatagaaaattatccgataacttttcatataagttccataaaccctaaatagaaggtagttattgcaaataccaataatattcatatcttgtatgaatgtatcggttaatgaatcgtcaggatattactgcctagtggtttgcaacgcacttctgataacatgaatacaaataaacccctgcatgcatattgtgtgtcgatgtgtccatttatgcaattttctagtgattactccacatttgagtggttataggcaagtagccttttacaggttttatgaattgaaactcaaatacatatgaacattacatcctcccctataactacagaccaggccttctagttagatatttgccaacaacatcaagaaatctattaccatttgattcagattttgttgattaaagatcatcaaatccaactaaaaacctaccatgtgaaaagtaccagattttcctattaaaaagctactgacgcaaaataaaataacaaaactagaaacactttaacatagtctgatagtcttgaattcacatagcagacttctgactttccctttcaaataattgttgcttccatggtgatgaagcctaatgtggatatcaggaggccagcaggattgacttcttgatctcttctggcaggcattatattgtttccacttattccgaccaatagtttcctaatgaatgctcttaattaagaagttttggtcctctttacattatataatatggacaggtatccactagcatatttcttaaatgttgttgtgcaagttcaaccatgaaactgttcttcattgctaaaatatgtatggtgaagtaatataggaactggttataaatgtgtcagaacctagatttgcaaatctgaatcatctgtgtaaacagacagttatattggcctaaccttttaatttatttaaaggtcagtcttgctacctttacaaggtaagaatccttttgcagggctagaacagccttatttagaaactaacagcatgccaaaattagaacagagtatccatgaactcactgtgaaagcatctgagcaaatgagtgtgtggttcagctacaaccttattttccatattttgccaagatcatcactactccacagtccacactactcaatttttcactccaattgttgagattatcaaccaaagtgttaaaacttttttataaagcattgaactagctgaaccctaccttaaaatccttaatgaccatgcattaagccattgtgttgtgcatgcatcataggcatatcctagtggcgaagtgtgcccacaaaatgctatttacaacacgaaatggcctgaggccaccctaacaatcttaaggaccacaagcattctgtaaacccagctactaatgcagcgaaattaacattaggctcagtagctcacccggtatcggcgggagagcgcctccgcggagtcgcccacgccacgatcggcggcggcgctcaggtcgcccctcccgaggctcatcagcttcgccttcctgatctgctccccctccgtgtcccccgagcccccgccgccgctcggtgccgacaccgacgccgacgccgacagcgccattgccagctgtatctggtactcctcctcctgcgtgatgaagtcatcccctcccgtctccatctccgcctcctccaccaccgcagccgccgcggccgatgacacccccacccccgccggggacggcgggggcggctgctgctgcgccgccggattcgacggcgcggcgggctcgtgcgaccggtgcgaccacttggtcacgaacgggatcttcatcgcccgcgcccgcgaccgcgaccgcgaaccctagggttcgcgtttcgaaaatttcctccccttcctcttcctcttcctagctctctcgttcggtgatgtgatcGggaagcgaaatggggtggaaacggagaagacgcggaaagggaggggggtttaagcaaaaatggcggggattagagtgctaaacaggctgtggaagtgattagagaaacaaaccgtctaccgaacgcccgctaacgcggcttaccagcgaacagagtgtgcaaagtacctcctgacctgcttgtgcttatgccaggatacttaaacactctgttgtttgataggcaat
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| CDS seq | atgaagatcccgttcgtgaccaagtggtcgcaccggtcgcacgagcccgccgcgccgtcgaatccggcggcgcagcagcagccgcccccgccgtccccggcgggggtgggggtgtcatcggccgcggcggctgcggtggtggaggaggcggagatggagacgggaggggatgacttcatcacgcaggaggaggagtaccagatacagctggcaatggcgctgtcggcgtcggcgtcggtgtcggcaccgagcggcggcgggggctcgggggacacggagggggagcagatcaggaaggcgaagctgatgagcctcgggaggggcgacctgagcgccgccgccgatcgtggcgtgggcgactccgcggaggcgctctcccgccgataccgggactataactttcttgactacaatgagaaagttatagatgggttctatgacatatttggactttccgcggagtcggccaggcagggaaagatgccatcgcttgcagaacttcagaccagcattggagatcttggctttgaagtgattgtggtcgaccataagtttgatagtgccttgcaggagatgatggaagtagcacaatgctgcatgttgggctgtcctgatactacagtattggtgcgacgaatagctgaagttgttgcaggacatatgggtggtcctgtgatagatgcaactgaaatgtttacgaaatggttgggcaaaagcattgagcagaggacatcacatcagacaagcctgctgcctataggccgcattgacataggcttgtctcggcatcgtgccttacttttcaagattcttgctgacagtgttggtattccatgcaagctggttaaagggagccattacactggtgttgaagatgatgctattaacattgtaaagatgaataacgaaagggaatttttggttgatgttatggctgccccaggaacactcattccagcagatgtctttatttcaaagggtactccattcaacttgactaaaccgttggtgcagaatcaggtggttgaattggcaagtaacattgaaaatgacccaagtgcagctcattctgagcatgtaggcaaccgattgcatatgtttggcaatggtaattcgttgtcagaaaatcaatcagggtgtgaaaaaaccatgatagctggaagtgaggttagtcaactctggacattggcacctcagatgcaatctgatcaacaatcaacttctgctggcgcacattcaatgcagaaagaggacttgaaattaactccagactctcaagaaaatgaagagtctaaaaagcaaatttcagagactgattctttcaggggtattgaaccgggtaaaagttcattggcattcaagggattaaacaatagaaataatgaatatcaaaggcgtagagagaatatagctccagcacctggaagatctcaacaaccattggtgatgaaaaactggtcagcttgtaatgacatttctaacaagcaatacaatattgctgaggggttagttcgtcggagaaacactagcgacaatgctgcatcgtcatctcagttggcctggtcaactgcaaagcattacaatcccaatggcagagagcgtaatgataggttatgtgcagcaccaggtcgtaattatgacaatagaaaagttggtgcctcaactacggcaacagcttctgccactggagaacgcctggatagaccaaacctggcacctgttcattactatgatgacaaaccgaatggtatttcttcagtgaatgcagcttctacatctggaatcgtgaaggttgcagaaaagggccctcatgatctggaaaaagttcccatctattctagatttgacagtcaaatctatagtagtatgcaagggtattctccagaagtgaaggagaacaaggaaaactatgataggcatgacaacatgaggttacatcctgatccaagaaggtcccctctagacagattcatggacacatcaaggcagaactcagaatctgtttctccaccccaagctgggtcaagcaccgttgacatggtgttgggcgaagtttctgaatgtgaaatcctctgggaggatcttctaattggtgaaaggattggcctaggttcgtatggagaagtataccatgccgattggaatggaactgaagtggctgtaaagaaattttTggatcaagagttctatggtgatgctttggctgaatttcgttgcgaggtgaggattatgcgccggcttcgtcatccaaatattgtactctttatgggtgcagtaacacggcctccacacttgtccattgtatcagaataccttcctaggggaagcttgtatacgattattcatcgccctgattgccaaattgatgagaagcgcaggattaaaatggcccttgatgtggccagaggcatgaattgtcttcatactagtgtaccgacaattgttcatcgggatctaaaatcaccaaacttgctggttgacaataattggaccgttaaggtatctatctgctttcgagaaccaaagcctgaaagcttgttgttagctaacaaattacatttacaggtctgtgattttggactttcacgtttgaagcacggtacatttttgtcatccaaatccactgcagggactctaatcgtagttgagagttttgcagttggtttccaggatagacggcttgatatccccatggaggttgatcctctagttgcatctattatacaggactgctggcagaaggatccaaacttgcgcccttcttttagccagctaactagctatctgaatacattgcaaaggctagtaatcccttgtcatcaggagacagcgggctcctatgtaccgcaagaaatatcgttataccggtga
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| Protein seq | MKIPFVTKWSHRSHEPAAPSNPAAQQQPPPPSPAGVGVSSAAAAAVVEEAEMETGGDDFITQEEEYQIQLAMALSASASVSAPSGGGGSGDTEGEQIRKAKLMSLGRGDLSAAADRGVGDSAEALSRRYRDYNFLDYNEKVIDGFYDIFGLSAESARQGKMPSLAELQTSIGDLGFEVIVVDHKFDSALQEMMEVAQCCMLGCPDTTVLVRRIAEVVAGHMGGPVIDATEMFTKWLGKSIEQRTSHQTSLLPIGRIDIGLSRHRALLFKILADSVGIPCKLVKGSHYTGVEDDAINIVKMNNEREFLVDVMAAPGTLIPADVFISKGTPFNLTKPLVQNQVVELASNIENDPSAAHSEHVGNRLHMFGNGNSLSENQSGCEKTMIAGSEVSQLWTLAPQMQSDQQSTSAGAHSMQKEDLKLTPDSQENEESKKQISETDSFRGIEPGKSSLAFKGLNNRNNEYQRRRENIAPAPGRSQQPLVMKNWSACNDISNKQYNIAEGLVRRRNTSDNAASSSQLAWSTAKHYNPNGRERNDRLCAAPGRNYDNRKVGASTTATASATGERLDRPNLAPVHYYDDKPNGISSVNAASTSGIVKVAEKGPHDLEKVPIYSRFDSQIYSSMQGYSPEVKENKENYDRHDNMRLHPDPRRSPLDRFMDTSRQNSESVSPPQAGSSTVDMVLGEVSECEILWEDLLIGERIGLGSYGEVYHADWNGTEVAVKKFLDQEFYGDALAEFRCEVRIMRRLRHPNIVLFMGAVTRPPHLSIVSEYLPRGSLYTIIHRPDCQIDEKRRIKMALDVARGMNCLHTSVPTIVHRDLKSPNLLVDNNWTVKVSICFREPKPESLLLANKLHLQVCDFGLSRLKHGTFLSSKSTAGTLIVVESFAVGFQDRRLDIPMEVDPLVASIIQDCWQKDPNLRPSFSQLTSYLNTLQRLVIPCHQETAGSYVPQEISLYR |
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| Function | Serine/threonine-protein kinase EDR1 [UniProtKB/Swiss-Prot:Q9FPR3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_10g0011660 | OsNaBo_10g0011660.01 | Chr10 | 17015175 | 17024214 | - | NAM | ||
| CDS seq | atgaagatcccgttcgtgaccaagtggtcgcaccggtcgcacgagcccgccgcgccgtcgaatccggcggcgcagcagcagccgcccccgccgtccccggcgggggtgggggtgtcatcggccgcggcggctgcggtggtggaggaggcggagatggagacgggaggggatgacttcatcacgcaggaggaggagtaccagatacagctggcaatggcgctgtcggcgtcggcgtcggtgtcggcaccgagcggcggcgggggctcgggggacacggagggggagcagatcaggaaggcgaagctgatgagcctcgggaggggcgacctgagcgccgccgccgatcgtggcgtgggcgactccgcggaggcgctctcccgccgataccgggactataactttcttgactacaatgagaaagttatagatgggttctatgacatatttggactttccgcggagtcggccaggcagggaaagatgccatcgcttgcagaacttcagaccagcattggagatcttggctttgaagtgattgtggtcgaccataagtttgatagtgccttgcaggagatgatggaagtagcacaatgctgcatgttgggctgtcctgatactacagtattggtgcgacgaatagctgaagttgttgcaggacatatgggtggtcctgtgatagatgcaactgaaatgtttacgaaatggttgggcaaaagcattgagcagaggacatcacatcagacaagcctgctgcctataggccgcattgacataggcttgtctcggcatcgtgccttacttttcaagattcttgctgacagtgttggtattccatgcaagctggttaaagggagccattacactggtgttgaagatgatgctattaacattgtaaagatgaataacgaaagggaatttttggttgatgttatggctgccccaggaacactcattccagcagatgtctttatttcaaagggtactccattcaacttgactaaaccgttggtgcagaatcaggtggttgaattggcaagtaacattgaaaatgacccaagtgcagctcattctgagcatgtaggcaaccgattgcatatgtttggcaatggtaattcgttgtcagaaaatcaatcagggtgtgaaaaaaccatgatagctggaagtgaggttagtcaactctggacattggcacctcagatgcaatctgatcaacaatcaacttctgctggcgcacattcaatgcagaaagaggacttgaaattaactccagactctcaagaaaatgaagagtctaaaaagcaaatttcagagactgattctttcaggggtattgaaccgggtaaaagttcattggcattcaagggattaaacaatagaaataatgaatatcaaaggcgtagagagaatatagctccagcacctggaagatctcaacaaccattggtgatgaaaaactggtcagcttgtaatgacatttctaacaagcaatacaatattgctgaggggttagttcgtcggagaaacactagcgacaatgctgcatcgtcatctcagttggcctggtcaactgcaaagcattacaatcccaatggcagagagcgtaatgataggttatgtgcagcaccaggtcgtaattatgacaatagaaaagttggtgcctcaactacggcaacagcttctgccactggagaacgcctggatagaccaaacctggcacctgttcattactatgatgacaaaccgaatggtatttcttcagtgaatgcagcttctacatctggaatcgtgaaggttgcagaaaagggccctcatgatctggaaaaagttcccatctattctagatttgacagtcaaatctatagtagtatgcaagggtattctccagaagtgaaggagaacaaggaaaactatgataggcatgacaacatgaggttacatcctgatccaagaaggtcccctctagacagattcatggacacatcaaggcagaactcagaatctgtttctccaccccaagctgggtcaagcaccgttgacatggtgttgggcgaagtttctgaatgtgaaatcctctgggaggatcttctaattggtgaaaggattggcctaggttcgtatggagaagtataccatgccgattggaatggaactgaagtggctgtaaagaaattttTggatcaagagttctatggtgatgctttggctgaatttcgttgcgaggtgaggattatgcgccggcttcgtcatccaaatattgtactctttatgggtgcagtaacacggcctccacacttgtccattgtatcagaataccttcctaggggaagcttgtatacgattattcatcgccctgattgccaaattgatgagaagcgcaggattaaaatggcccttgatgtggccagaggcatgaattgtcttcatactagtgtaccgacaattgttcatcgggatctaaaatcaccaaacttgctggttgacaataattggaccgttaaggtatctatctgctttcgagaaccaaagcctgaaagcttgttgttagctaacaaattacatttacaggtctgtgattttggactttcacgtttgaagcacggtacatttttgtcatccaaatccactgcagggactctaatcgtagttgagagttttgcagttggtttccaggatagacggcttgatatccccatggaggttgatcctctagttgcatctattatacaggactgctggcagaaggatccaaacttgcgcccttcttttagccagctaactagctatctgaatacattgcaaaggctagtaatcccttgtcatcaggagacagcgggctcctatgtaccgcaagaaatatcgttataccggtga
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| Protein seq | MKIPFVTKWSHRSHEPAAPSNPAAQQQPPPPSPAGVGVSSAAAAAVVEEAEMETGGDDFITQEEEYQIQLAMALSASASVSAPSGGGGSGDTEGEQIRKAKLMSLGRGDLSAAADRGVGDSAEALSRRYRDYNFLDYNEKVIDGFYDIFGLSAESARQGKMPSLAELQTSIGDLGFEVIVVDHKFDSALQEMMEVAQCCMLGCPDTTVLVRRIAEVVAGHMGGPVIDATEMFTKWLGKSIEQRTSHQTSLLPIGRIDIGLSRHRALLFKILADSVGIPCKLVKGSHYTGVEDDAINIVKMNNEREFLVDVMAAPGTLIPADVFISKGTPFNLTKPLVQNQVVELASNIENDPSAAHSEHVGNRLHMFGNGNSLSENQSGCEKTMIAGSEVSQLWTLAPQMQSDQQSTSAGAHSMQKEDLKLTPDSQENEESKKQISETDSFRGIEPGKSSLAFKGLNNRNNEYQRRRENIAPAPGRSQQPLVMKNWSACNDISNKQYNIAEGLVRRRNTSDNAASSSQLAWSTAKHYNPNGRERNDRLCAAPGRNYDNRKVGASTTATASATGERLDRPNLAPVHYYDDKPNGISSVNAASTSGIVKVAEKGPHDLEKVPIYSRFDSQIYSSMQGYSPEVKENKENYDRHDNMRLHPDPRRSPLDRFMDTSRQNSESVSPPQAGSSTVDMVLGEVSECEILWEDLLIGERIGLGSYGEVYHADWNGTEVAVKKFLDQEFYGDALAEFRCEVRIMRRLRHPNIVLFMGAVTRPPHLSIVSEYLPRGSLYTIIHRPDCQIDEKRRIKMALDVARGMNCLHTSVPTIVHRDLKSPNLLVDNNWTVKVSICFREPKPESLLLANKLHLQVCDFGLSRLKHGTFLSSKSTAGTLIVVESFAVGFQDRRLDIPMEVDPLVASIIQDCWQKDPNLRPSFSQLTSYLNTLQRLVIPCHQETAGSYVPQEISLYR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_10g0011660 | OsNaBo_10g0011660.02 | Chr10 | 17015175 | 17023973 | - | NAM | ||
| CDS seq | atgaagatcccgttcgtgaccaagtggtcgcaccggtcgcacgagcccgccgcgccgtcgaatccggcggcgcagcagcagccgcccccgccgtccccggcgggggtgggggtgtcatcggccgcggcggctgcggtggtggaggaggcggagatggagacgggaggggatgacttcatcacgcaggaggaggagtaccagatacagctggcaatggcgctgtcggcgtcggcgtcggtgtcggcaccgagcggcggcgggggctcgggggacacggagggggagcagatcaggaaggcgaagctgatgagcctcgggaggggcgacctgagcgccgccgccgatcgtggcgtgggcgactccgcggaggcgctctcccgccgataccgggactataactttcttgactacaatgagaaagttatagatgggttctatgacatatttggactttccgcggagtcggccaggcagggaaagatgccatcgcttgcagaacttcagaccagcattggagatcttggctttgaagtgattgtggtcgaccataagtttgatagtgccttgcaggagatgatggaagtagcacaatgctgcatgttgggctgtcctgatactacagtattggtgcgacgaatagctgaagttgttgcaggacatatgggtggtcctgtgatagatgcaactgaaatgtttacgaaatggttgggcaaaagcattgagcagaggacatcacatcagacaagcctgctgcctataggccgcattgacataggcttgtctcggcatcgtgccttacttttcaagattcttgctgacagtgttggtattccatgcaagctggttaaagggagccattacactggtgttgaagatgatgctattaacattgtaaagatgaataacgaaagggaatttttggttgatgttatggctgccccaggaacactcattccagcagatgtctttatttcaaagggtactccattcaacttgactaaaccgttggtgcagaatcaggtggttgaattggcaagtaacattgaaaatgacccaagtgcagctcattctgagcatgtaggcaaccgattgcatatgtttggcaatggtaattcgttgtcagaaaatcaatcagggtgtgaaaaaaccatgatagctggaagtgaggttagtcaactctggacattggcacctcagatgcaatctgatcaacaatcaacttctgctggcgcacattcaatgcagaaagaggacttgaaattaactccagactctcaagaaaatgaagagtctaaaaagcaaatttcagagactgattctttcaggggtattgaaccgggtaaaagttcattggcattcaagggattaaacaatagaaataatgaatatcaaaggcgtagagagaatatagctccagcacctggaagatctcaacaaccattggtgatgaaaaactggtcagcttgtaatgacatttctaacaagcaatacaatattgctgaggggttagttcgtcggagaaacactagcgacaatgctgcatcgtcatctcagttggcctggtcaactgcaaagcattacaatcccaatggcagagagcgtaatgataggttatgtgcagcaccaggtcgtaattatgacaatagaaaagttggtgcctcaactacggcaacagcttctgccactggagaacgcctggatagaccaaacctggcacctgttcattactatgatgacaaaccgaatggtatttcttcagtgaatgcagcttctacatctggaatcgtgaaggttgcagaaaagggccctcatgatctggaaaaagttcccatctattctagatttgacagtcaaatctatagtagtatgcaagggtattctccagaagtgaaggagaacaaggaaaactatgataggcatgacaacatgaggttacatcctgatccaagaaggtcccctctagacagattcatggacacatcaaggcagaactcagaatctgtttctccaccccaagctgggtcaagcaccgttgacatggtgttgggcgaagtttctgaatgtgaaatcctctgggaggatcttctaattggtgaaaggattggcctaggttcgtatggagaagtataccatgccgattggaatggaactgaagtggctgtaaagaaattttTggatcaagagttctatggtgatgctttggctgaatttcgttgcgaggtgaggattatgcgccggcttcgtcatccaaatattgtactctttatgggtgcagtaacacggcctccacacttgtccattgtatcagaataccttcctaggggaagcttgtatacgattattcatcgccctgattgccaaattgatgagaagcgcaggattaaaatggcccttgatgtggccagaggcatgaattgtcttcatactagtgtaccgacaattgttcatcgggatctaaaatcaccaaacttgctggttgacaataattggaccgttaaggtctgtgattttggactttcacgtttgaagcacggtacatttttgtcatccaaatccactgcagggactgatagacggcttgatatccccatggaggttgatcctctagttgcatctattatacaggactgctggcagaaggatccaaacttgcgcccttcttttagccagctaactagctatctgaatacattgcaaaggctagtaatcccttgtcatcaggagacagcgggctcctatgtaccgcaagaaatatcgttataccggtga
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| Protein seq | MKIPFVTKWSHRSHEPAAPSNPAAQQQPPPPSPAGVGVSSAAAAAVVEEAEMETGGDDFITQEEEYQIQLAMALSASASVSAPSGGGGSGDTEGEQIRKAKLMSLGRGDLSAAADRGVGDSAEALSRRYRDYNFLDYNEKVIDGFYDIFGLSAESARQGKMPSLAELQTSIGDLGFEVIVVDHKFDSALQEMMEVAQCCMLGCPDTTVLVRRIAEVVAGHMGGPVIDATEMFTKWLGKSIEQRTSHQTSLLPIGRIDIGLSRHRALLFKILADSVGIPCKLVKGSHYTGVEDDAINIVKMNNEREFLVDVMAAPGTLIPADVFISKGTPFNLTKPLVQNQVVELASNIENDPSAAHSEHVGNRLHMFGNGNSLSENQSGCEKTMIAGSEVSQLWTLAPQMQSDQQSTSAGAHSMQKEDLKLTPDSQENEESKKQISETDSFRGIEPGKSSLAFKGLNNRNNEYQRRRENIAPAPGRSQQPLVMKNWSACNDISNKQYNIAEGLVRRRNTSDNAASSSQLAWSTAKHYNPNGRERNDRLCAAPGRNYDNRKVGASTTATASATGERLDRPNLAPVHYYDDKPNGISSVNAASTSGIVKVAEKGPHDLEKVPIYSRFDSQIYSSMQGYSPEVKENKENYDRHDNMRLHPDPRRSPLDRFMDTSRQNSESVSPPQAGSSTVDMVLGEVSECEILWEDLLIGERIGLGSYGEVYHADWNGTEVAVKKFLDQEFYGDALAEFRCEVRIMRRLRHPNIVLFMGAVTRPPHLSIVSEYLPRGSLYTIIHRPDCQIDEKRRIKMALDVARGMNCLHTSVPTIVHRDLKSPNLLVDNNWTVKVCDFGLSRLKHGTFLSSKSTAGTDRRLDIPMEVDPLVASIIQDCWQKDPNLRPSFSQLTSYLNTLQRLVIPCHQETAGSYVPQEISLYR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_10g0011660 | OsNaBo_10g0011660.03 | Chr10 | 17015175 | 17023947 | - | IsoSeq | ||
| CDS seq | gaaggggaggaaattttcgaaacgcgaaccctagggttcgcggtcgcggtcgcgggcgcgggcgatgaagatcccgttcgtgaccaagtggtcgcaccggtcgcacgagcccgccgcgccgtcgaatccggcggcgcagcagcagccgcccccgccgtccccggcgggggtgggggtgtcatcggccgcggcggctgcggtggtggaggaggcggagatggagacgggagg
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| Protein seq | EGEEIFETRTLGFAVAVAGAGDEDPVRDQVVAPVARARRAVESGGAAAAAPAVPGGGGGVIGRGGCGGGGGGDGDGR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr10 | 17017297 | 17017530 | - | OsNaBo_10g0011660.01 | OsNaBo_10g0011660.01,OsNaBo_10g0011660.03,OsNaBo_10g0011660.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.794746 | 10.912084 | 7.662852 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0430900 | RBH | 1.927220 | 1.181120 | 7.186831 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g29540 | RBH | 1.035898 | 0.741281 | 1.581039 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0430900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0011610 | RBH | 0.476629 | 13.240893 | 7.055845 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0011830 | RBH | 0.216530 | 5.410575 | 2.799237 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0011530 | RBH | 0.798098 | 5.517209 | 9.376321 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0011850 | RBH | 0.108967 | 0.377052 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0011590 | RBH | 6.289587 | 11.513606 | 11.304633 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0256800 | RBH | 3.750513 | 12.671357 | 5.8196835 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0011640 | RBH | 0.238968 | 0.698157 | 1.006433 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0276000 | RBH | 4.626162 | 11.509249 | 8.4961875 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0011380 | RBH | 0.132757 | 0.209554 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0011360 | RBH | 0.596412 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0011780 | RBH | 3.607139 | 13.056755 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0011360 | RBH | 0.590266 | 0.0 | 1.556023 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0011850 | RBH | 0.371739 | 5.757419 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G011720 | RBH | 0.452614 | 2.778796 | 3.221243 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
