Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNaBo_10g0010170 OGI:10045420 | 16/16 NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) Chr10:15476005-15484034
Gene Symbol SUT3, OsSUT3(t), OsSUT3, SUC3, OsSUT2, -
DNA seq

atctcttgggatataactagcttagctatagctctagctaaataggttcgtacgtataggatatttgatccattgatcgatggccgtcgacatggagctcgacggcggtggcgacggcaagggcaaagccccgccgcagataagcctgtcggggctattccttgcgtgcatggtcgccggtggcgtgcagtacggctgggcgctgcagctctctctcctcaccccgtacgttcaggtatgtgtttaaggcgttttggcctttttcattttcgtctatattcattagcatctatatgaatttgaacacacacATATatatatatatatatatatatatatggattcacgtatgaatctattcaaaacccaaactgtcttaactaataatatggaacagagaacatagtactacttagttgttgtgattatatatatgtactatacttttcttgtctccaagagggagaTtttttttttctgttgtcttttaactctttattgatgtgaaggtgtaatttgtttgtgtggaaatatttggaggaattccaaatagtattgggaatatcagatttcctcttatgctgcctgtttgctatggctaatcttgatctaactcccacctcaaaaaataaaacatgtagcttaacatctagctttcatattagcatcttcccaattaagctggttatagctatagcctattttatggtgtttttactcattatgttcctttggaaagcaacaatataattgttttcctcattcttgtagagttgaattaattcctgtgaaaatctgaaaaaaattgtgtgtacaattccagcatttctaaacaaaagcttgaacatttgctaatatacagttttcaaaagaaaaattttggaactggatttcacgattcatttttccaaggcacttgtcctgcaaaaagttctatagctgtaatatgggcaattccttgagtaataagtcatttatttcaccgcaagttcttgcgtagttgtggtgtaggtcagattgtttttatccatgaacttattacttctgtaaattaatttggtatatattgttaagttcagctatatcctggtaatagaaaatgaatgtttttattagtaaaagTtttttttataaaatgaaatgaattcatttctatgtttaggagtaaagcattgtctagcacagcaagggactgtaactaaaaatggtatgtgagttgtttcaTttttgttctaactgaaccatggcaccatataacaaagtattaatcttgaataaagtcaccagatgttattttttggtcaaaatagaaaggcattttccatatatttacaatcatactaccaaattaaaattatactccctccggtttttaatgtaccacgtcattaacttttagacatatgtttaaactttttgtgttattAaaaaaataatgcaaatacgtacatattatcaagattgcggtagattcagatcaattttcttgtgtggcttgttttggcctaggagtacatggactaaccaagttattgtattaaaatgaacaacctataagttgttgtacctatctgcacccaccacgcaagttcatgtaccatgagcacaatttactccttatattatctttaatataaaacaaatcaaaacaaaataaatgtttattatataattcttttaataagacaaatgatcaaacatcgtccaaaagtcaacagcgtcgtacatgcatggaaaacctgagggagtacccttgttgtgctttgataaaatccagcatgaactaattactaatttctcttcatatatgtgcatggcttaattcattcactaacttcatttcactatcactttgtttggaacagacattgggaattcctcatgcactcacttcagttatgtggctctgtggccctattgctggcttaattgtaagtagtgccctatctatggcgatgtcatatatcattccctggtcttaaaaaaagaaaactcacaaaattatatcaagatttatgatttcagaaacatgatccttcaaagtacgttttctcctcacgtttgtgcctttcatcctgcaggttcagccatgcgtcggcctgtacagtgacaagtgcacatccagccttggaagacgtagaccgttcatcctcactggatgcataatcatctgcatatctgtgagaaaaacccaattatcatccaactactctcttcgtttcatattataaatcgtttaaacTtttttttaagttaaacttgttttaaaaaaatttgatcatcaaatttatataaaaatatagtaatatttatagcactaatttgcactacattcccaatgccctgatagagagatattcgcggcagccacgaccatcaccctacgagataggaagacggcgagtttctgcactcgcacaggcttgaaaacaagattcctaagacaatggcaccggccatctacgcatcttcaaggcgaaagaatcaaatagtttgtgaggccctctcctctaacactttgattcgtgacatctgactgctacaaatcacaacagtagatcacctaagtcagtatgtcgagctatggaccatgatccagagaataggccccttaggatactagagagacaccatcacttagaagtttacagcaaatggtgaatagtcggcaaaatcggcttatcagctacaattcctatgtgcagtaggaacggtgttcaatcaaacaatttggaaatgttaggcgcccccaaagtgcaaatttttcatatagttggtcatccaaaatagggtgtggacggctgataggctatagaagagaggttagcaaaaccaaagagtctgcctcttctatagagtatcacaggaaacgacaatccatcttgtcgcaaaatgcaggctctctataaggatttagacagccatacaacattgggcgagcatagacctcaaaatacaagattgggacgcttgcgcttcgatggaagaatggtggaagagggttcttcacacaccgcacatccccaacggacctttaaaatccctgattatactggtgggttgggagctctggtgtgagagaaacactaggatattccgccacgtggctaccaccctgacaaccatcatcgctaaaatcaaaaaagaggggttggcctggatcaaagtgggatcaaagtgggagccgcaaaagctcgctgagttaacttcgttggaagaaccttgtaatttccccttctgtgggctctttttttttatggcaggccctgtaaataactcttttttttggttgtttgtttttttttctactctatcaatatatgtaaggtaaagctttcgtcTtttttttaaaaaaaataagtgcactatatctaacaattccataaatttagttaaaactaaagtgacttaaaagtttaaaaaactaataatatgaaacggaggtaagtagttagttatttgattaactaattacatgactgacaggtgatcgtcatcgggttctcctcggacatcggctacgctctcggcgacgcgactgaggactgcaagtaattaagctgctcgatcactgacagtgacagagcttgatgaattcgctgattaaatcattggtcgattagtaagcaaaatttcaggattcggactcgctaatcgagcgacttaatccatccagggtttacaggggtcctcgttaccatgcagcggcggcattcatcctcggattctggctgctcgacttctccaacaacaccgtgcaggtatgcagcctgaagaagaagaaagaaaactctcagctctgaatccatctgaaactctgaataatctgcaatgtgatatatgattctcgcgcagggtccagctcgcgctctgatggccgatttgtcaggtgagtcgtgagaagattaacaccagattttatacctgatttgatgacagattagttgtgttcttggttttggttttctgaattttgttgcttactgaacattggaatatattcaggtcggcatggcccaagcgcggccaacgcgatcttctgttcttggatggcattaggcaacatccttggctactcctccggatccaccaatgactggcacaagtcggtgatcgatcgctgatgactacagctgctctgaattttctcatcatcaaaatcatctatggaatgctaaatcagcagctttgatcagttcttgatgccaatttttttttctaagaaaaatgaacggaatgctatattcatagtggaattgcattgcatgtggccgcaggtggtttccctttctcatgaccagggcttgctgcgaggcctgcgcgaatctcaaagcggccttcttggttgcagtggtaattattttatttaattaaaagctgcagcttttatacaactatagtaccttcaaaattgaaggtttttacgtgacatgtatttttttctattacacgaaagacaatgcgtaatgcatcatggaacacacattcaagacaagaccagcgacaaaatctctaaaattactaaatttgattttgatgtaatgtgcgcaggtgtttttggggttgtcgacggcggtgacgatggtgtttgcgagggaggtggcgctggacccagtggcggcggcgaagcggaacgagggtgaggcgtcggggcccctcgccgtgttcaaggggatgaagaacctccccatcgggatgccgtcggtgcttatcgtcaccggcctcacctggctctcgtggttccccttcatcctcttcgacaccgactggatgggccgcgagatctaccatggccgcccggacggctcccccgctgaggtcaccgccttccaagagggtgtccgccaaggcgccttcggcctcctccttaactcggtcagatcgagctatccatcaattacttgcctttttttctctccggtttaaaatatttgatgttaagaataatacttaaattaTtttttaaaaaataaaattgacctaaaacctaaagttttgaattgtgatagtgttaatacttttcgaggcaaatatgcacataaaagttttctttttctacttttttaactaacaatttgaaaaatgatttaactgtcaagttttcaaaatcctgatcaaatcttttccctgaacgtctattattttcttttacggagactgtatctactagctacttcattccacgttataataataagacgttatgatatcaccgttactcgtatagattcactatctttcatatgaatctaaacacatatataatacacacgaattaatctatacgttaatctttactacttaaaacaatgaagatgtttcttcgtccatccaaataaaaaaaagcaaaaaaaacataaaatgaaaggggaggcaaataaaaaaccggtgagccgaaaagaggtacaccgagcagagtgaaggaatgagcgtttggtccaaaaccaaggaaatacagtgtataggataaagctgttgtaacacagtcattttttcattccattgaaaacactaaacgtcttgttgaactgacacgtcggcaatggccgcagatcgtgctgggcatcagctcgttcctgatcgagccgatgtgccgtcggctgggcgcccgcgcggtgtgggtgatgagcagcgccgtcgtgtgcgtcgccatggcggccgtctccgtgctcagcgcgtggtcgctcggcgacttcggcggctcggtgcaggacgcggcgcgggcgccggcggaggagggcggcgtcagggcgtcggcgctggcgctcttcgtcttcctcggcctccccttcgccgtcctctgcagcgtcccgttcgccgtcacggcgcagctcgcggcgagccgcggcggcgggcagggcctctgcaccggcgtcctcaacatctccatcgtcgtgccgcagatggccatcgccctcggcgccgggccctgggacgagctgttcggggaggggaacatcccagcgttcgccatggcgtccgtgttcgccgccgcggccgccgccgccggcgtcgtcttgctgcccaaggtctccgtccgctccgtcagcatggccggtggccactgatcactactagtctatcaccctttttttttccgtggttttaaatctcccgctataacttatagctgctatctccagttagagcgggtactatagcaggccataagccagctgtaaatatatttcaagaagataaatgaggagagagaagagcagcgggctacatatttgtagctagctgtagcacagactccaagacgcagcgtgcatatgacaggtgggaccaggtattaattgtgtagtatgtaactattatatgaatgagctattaaattagctataaatgaattggagttaatagttggctatactattaaacttgctcttatagctgtttgagaagagttctagctatttgctctcatgcgtaatttagccgctatagctccacttaatccacagttagctgctgctatagctgtttgagtatgctaactgccaaatattttagcccgctaattaaaacactgctaatcgattaactaactaactaattatttacagtgactcactaagctatagagctagctagttaactaatgacaattagtagtgataatatatattctgggttagttcaaatgttggtagtcttattttaaacttgttttttttttatcttttgtaaatcatgtggactttggatgggtaatgagcaattaatgcaaatgggcttcgatgggctccaatctgtgatatgcttccaatcttggaataagttgacctgccctccctcaactttacatcgagtttgtataacatccctaatccccgatatAaaaaatcttcacccctaaactacataagagcatcctcaatgtttatggtgtagtgtaaccttaaggtgtgccctatgaatagtgagccattgttatagtcatacccacaatgctatggttagaatttagccacaaaatggcccacatagaatggaaaaataattgtttcatctcttgttcatgaagtgaatgagagagaaaaaatattttctttttgcttgtggtagaacttaagcataaggtacaccctaagctaatgctactttccacaatgtatatgactcactttacaagtgcaatcattaccttaaggtcacctttttcatacattgtggttgccctaaaaccatgcaattcgggtcctatagcatataacagtatggatctctagttacactgacgtggcatcctattcagcaaaataaaaaatatatatatgtgtcccacatgtcagccgtcctcttcttccttctcttttcttccaggatggggagggatggggacggccgatctagctagggtagcaggctgttggatccgggcgccggaggcgcccgccccctcagccgccgccactccccagggtgggggagctgcctccacctccacatccacctccaccaccgcccgcctcaggccctcagcagcctacacctccgcccgccaccgtagtgaagggaggtgagcctctcagtggtggtgaagtgagcagcgcccatgagccgccggttggtagccacgacgggttccttggcctcaccaacgcctcaacccacctcaccgcctccgcctccacctccgccttagccgcctccgcctccactcgccgtctcggtgaagggaggtgagcctcccagcagtggtgaagggagcaacgcccgcgagccaccggtctataaccacagcgggtcggttcaccaacgcctccaccgacggcaccgccaccaacaggttcatggccgtggagttagatgcaccaaagcaacgcgtgtgcattgcggtgtgcttgtcatccctgtcgctgccactgttgtcggaccccggggccgacaacccaccctcgacgaacgccacagagtcgctcagtgaaaggcggtgcgtgccccgctacgacgccgcgaactcggcgaactcatccgcccatgccgcgtccccgatgccggccttcgacgtcaacggcatctga

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CDS seq

atgtggctctgtggccctattgctggcttaattaaacatgatccttcaaagtacgttttctcctcacgtttgtgcctttcatcctgcaggttcagccatgcgtcggcctgtacagtgacaagtgcacatccagccttggaagacctctggtgtgagagaaacactaggatattccgccacgtggctaccaccctgacaaccatcatcgctaaaatcaaaaaagaggggttggcctggatcaaagtgggatcaaagggtcctcgttaccatgcagcggcggcattcatcctcggattctggctgctcgacttctccaacaacaccgtgcagggtccagctcgcgctctgatggccgatttgtcaggtcggcatggcccaagcgcggccaacgcgatcttctgttcttggatggcattaggcaacatccttggctactcctccggatccaccaatgactggcacaagtggtttccctttctcatgaccagggcttgctgcgaggcctgcgcgaatctcaaagcggccttcttggttgcagtggtgtttttggggttgtcgacggcggtgacgatggtgtttgcgagggaggtggcgctggacccagtggcggcggcgaagcggaacgagggtgaggcgtcggggcccctcgccgtgttcaaggggatgaagaacctccccatcgggatgccgtcggtgcttatcgtcaccggcctcacctggctctcgtggttccccttcatcctcttcgacaccgactggatgggccgcgagatctaccatggccgcccggacggctcccccgctgaggtcaccgccttccaagagggtccgatgtgccgtcggctgggcgcccgcgcggtgtgggtgatgagcagcgccgtcgtgtgcgtcgccatggcggccgtctccgtgctcagcgcgtggtcgctcggcgacttcggcggctcggtgcaggacgcggcgcgggcgccggcggaggagggcggcgtcagggcgtcggcgctggcgctcttcgtcttcctcggcctccccttcgccgtcctctgcagcgtcccgttcgccgtcacggcgcagctcgcggcgagccgcggcggcgggcagggcctctgcaccggcgtcctcaacatctccatcgtcgtgccgcagatggccatcgccctcggcgccgggccctgggacgagctgttcggggaggggaacatcccagcgttcgccatggcgtccgtgttcgccgccgcggccgccgccgccggcgtcgtcttgctgcccaaggtctccgtccgctccggtgggggagctgcctccacctccacatccacctccaccaccgcccgcctcaggccctcagcagcctacacctccgcccgccaccgtagtgaagggagggaggtgagcctcccagcagtggtgaagggagcaacgcccgcgagccaccggtctataaccacagcgggtcggttcaccaacgcctccaccgacggcaccgccaccaacaggttcatggccgtggagttagatgcaccaaagcaacgcgtgtgcattgcggtgtgcttgtcatccctgtcgctgccactgttgtcggaccccggggccgacaacccaccctcgacgaacgccacagagtcgctcagtgaaaggcggtgcgtgccccgctacgacgccgcgaactcggcgaactcatccgcccatgccgcgtccccgatgccggccttcgacgtcaacggcatctga

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Protein seq

MWLCGPIAGLIKHDPSKYVFSSRLCLSSCRFSHASACTVTSAHPALEDLWCERNTRIFRHVATTLTTIIAKIKKEGLAWIKVGSKGPRYHAAAAFILGFWLLDFSNNTVQGPARALMADLSGRHGPSAANAIFCSWMALGNILGYSSGSTNDWHKWFPFLMTRACCEACANLKAAFLVAVVFLGLSTAVTMVFAREVALDPVAAAKRNEGEASGPLAVFKGMKNLPIGMPSVLIVTGLTWLSWFPFILFDTDWMGREIYHGRPDGSPAEVTAFQEGPMCRRLGARAVWVMSSAVVCVAMAAVSVLSAWSLGDFGGSVQDAARAPAEEGGVRASALALFVFLGLPFAVLCSVPFAVTAQLAASRGGGQGLCTGVLNISIVVPQMAIALGAGPWDELFGEGNIPAFAMASVFAAAAAAAGVVLLPKVSVRSGGGAASTSTSTSTTARLRPSAAYTSARHRSEGREVSLPAVVKGATPASHRSITTAGRFTNASTDGTATNRFMAVELDAPKQRVCIAVCLSSLSLPLLSDPGADNPPSTNATESLSERRCVPRYDAANSANSSAHAASPMPAFDVNGI

Function Sucrose transport protein SUT3 [UniProtKB/Swiss-Prot:Q944W2]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNaBo_10g0010170 OsNaBo_10g0010170.01 Chr10 15477801 15484034 + NAM
CDS seq

atgtggctctgtggccctattgctggcttaattaaacatgatccttcaaagtacgttttctcctcacgtttgtgcctttcatcctgcaggttcagccatgcgtcggcctgtacagtgacaagtgcacatccagccttggaagacctctggtgtgagagaaacactaggatattccgccacgtggctaccaccctgacaaccatcatcgctaaaatcaaaaaagaggggttggcctggatcaaagtgggatcaaagggtcctcgttaccatgcagcggcggcattcatcctcggattctggctgctcgacttctccaacaacaccgtgcagggtccagctcgcgctctgatggccgatttgtcaggtcggcatggcccaagcgcggccaacgcgatcttctgttcttggatggcattaggcaacatccttggctactcctccggatccaccaatgactggcacaagtggtttccctttctcatgaccagggcttgctgcgaggcctgcgcgaatctcaaagcggccttcttggttgcagtggtgtttttggggttgtcgacggcggtgacgatggtgtttgcgagggaggtggcgctggacccagtggcggcggcgaagcggaacgagggtgaggcgtcggggcccctcgccgtgttcaaggggatgaagaacctccccatcgggatgccgtcggtgcttatcgtcaccggcctcacctggctctcgtggttccccttcatcctcttcgacaccgactggatgggccgcgagatctaccatggccgcccggacggctcccccgctgaggtcaccgccttccaagagggtccgatgtgccgtcggctgggcgcccgcgcggtgtgggtgatgagcagcgccgtcgtgtgcgtcgccatggcggccgtctccgtgctcagcgcgtggtcgctcggcgacttcggcggctcggtgcaggacgcggcgcgggcgccggcggaggagggcggcgtcagggcgtcggcgctggcgctcttcgtcttcctcggcctccccttcgccgtcctctgcagcgtcccgttcgccgtcacggcgcagctcgcggcgagccgcggcggcgggcagggcctctgcaccggcgtcctcaacatctccatcgtcgtgccgcagatggccatcgccctcggcgccgggccctgggacgagctgttcggggaggggaacatcccagcgttcgccatggcgtccgtgttcgccgccgcggccgccgccgccggcgtcgtcttgctgcccaaggtctccgtccgctccggtgggggagctgcctccacctccacatccacctccaccaccgcccgcctcaggccctcagcagcctacacctccgcccgccaccgtagtgaagggagggaggtgagcctcccagcagtggtgaagggagcaacgcccgcgagccaccggtctataaccacagcgggtcggttcaccaacgcctccaccgacggcaccgccaccaacaggttcatggccgtggagttagatgcaccaaagcaacgcgtgtgcattgcggtgtgcttgtcatccctgtcgctgccactgttgtcggaccccggggccgacaacccaccctcgacgaacgccacagagtcgctcagtgaaaggcggtgcgtgccccgctacgacgccgcgaactcggcgaactcatccgcccatgccgcgtccccgatgccggccttcgacgtcaacggcatctga

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Protein seq

MWLCGPIAGLIKHDPSKYVFSSRLCLSSCRFSHASACTVTSAHPALEDLWCERNTRIFRHVATTLTTIIAKIKKEGLAWIKVGSKGPRYHAAAAFILGFWLLDFSNNTVQGPARALMADLSGRHGPSAANAIFCSWMALGNILGYSSGSTNDWHKWFPFLMTRACCEACANLKAAFLVAVVFLGLSTAVTMVFAREVALDPVAAAKRNEGEASGPLAVFKGMKNLPIGMPSVLIVTGLTWLSWFPFILFDTDWMGREIYHGRPDGSPAEVTAFQEGPMCRRLGARAVWVMSSAVVCVAMAAVSVLSAWSLGDFGGSVQDAARAPAEEGGVRASALALFVFLGLPFAVLCSVPFAVTAQLAASRGGGQGLCTGVLNISIVVPQMAIALGAGPWDELFGEGNIPAFAMASVFAAAAAAAGVVLLPKVSVRSGGGAASTSTSTSTTARLRPSAAYTSARHRSEGREVSLPAVVKGATPASHRSITTAGRFTNASTDGTATNRFMAVELDAPKQRVCIAVCLSSLSLPLLSDPGADNPPSTNATESLSERRCVPRYDAANSANSSAHAASPMPAFDVNGI

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Gene Transcript Chromosome Start End Strand Source
OsNaBo_10g0010170 OsNaBo_10g0010170.02 Chr10 15476005 15482378 + IsoSeq
CDS seq

atggccgcccggacggctcccccgctgaggtcaccgccttccaagagggtgtccgccaaggcgccttcggcctcctccttaactcgatcgtgctgggcatcagctcgt

Protein seq

MAARTAPPLRSPPSKRVSAKAPSASSLTRSCWASAR

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
A3 Chr10 15477935 15478086 + OsNaBo_10g0010170.01 OsNaBo_10g0010170.01,OsNaBo_10g0010170.02 All

Expression

Leaf Root Panicle
FPKM 0.0 0.0 6.446736

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_10g0404566 RBH 0.0 0.0 1.362536
Nipponbare | IRGSP 1.0 | MSU LOC_Os10g26470 RBH 0.0 0.0 0.814168
Nipponbare | IRGSP 1.0 | RAP-db Os10g0404566 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_10g0010020 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_10g0010100 RBH 0.0 0.0 4.492454
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_10g0009970 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_10g0010340 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_10g0010080 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_10G0236100 RBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_10g0010110 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_10G0255900 RBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_10g0009890 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_10g0009860 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_10g0010280 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_10g0009900 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_10g0010390 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_10G010210 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0005150 RBH 5.303975 5.787973 21.535820
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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