Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_10g0006960 | OGI:10033050 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr10:10913162-10954861 | ||||||||
| Gene Symbol | AM34, AM34 | ||||||||||
| DNA seq | tcatgacatgatcgactccacgaatatgtcgaagttgccatgggagcaaccatcctcctgaatgctctcgtgtgccaccgccatcatcgcctcgatcctcttcctcatgccggcgtctcccatcacctctaccactctgccggcgatgtgctccttcgtgaccatgcccgacttctcgtcagcgacggctgggagcacgatccgccagatgtcgcagatgtacgcccggttgacgaactggtcggcgaagtacggccacgccacgaacggcacgccgttccggacgccctccatggtcgagttccacccgcagtgcgacacgaagcacgccaccgccgggtgcgccagcacccgctgctgcggtgcccacgccacgagcttgccacggccaccgccgttaatgccggacgcgacgacgcggtccaggaagccgtcggggtattcgtgcacgtcgccatggacgatgtctgggcgcaccacccacaggaaaggccggccggtgagctcgagacccagggcgagctcctggaactggcgccggtcgaacacggtgaagctgccaaaggcgacgtacacgacggaccgcaccggctgcgcgtccagccacgacatgcacgcgccgtcctcggggcgccagaagtggccgacgggcttgcctgggcgctcgccggtgaggagcgggccgacggggatgatcttggggaaccgcgcgaacgtcgccgcctccgcgccgcggaaggagttgcagaggatgtagtcacactcgtcgatggcacggatgccagcgaggacgcaactgaacagcagctcctgcccctcgtcgttgccgatgcagttccacgccaggtgagccgggtgcatcaccggcatgtctggcgacagctggaaggcctcttgcgttagtgctgaccctgcccaggaaaaccaacaagatggaaataccagttagaagcctatcagtttctgatttcagaatttgaaatttggttttttcggtgaggaatttaacatcttgatgtcggattagcattttggatcttctacgaaatttgagttgcttcccgtacaaaattttggtctgtgaaacgcaattgtgtcacgcaaaaaattggttctaccaagcaaagccaacattaatttgcaagtaccatcgggccaattagtttagtgtcgacagtaaactggggtaaaaacttttgaatttttgaccgtcggattcgcctcaagattcgtgctggcgcgttcatggaaaaaatccgcgtgagaactataatttgtgcgctgtatggggttcaaacccaggacctcaatcccaacagctatgcgtgctagccacttcatctctggcaagttttttttagaaagtttgcaagttacagttagttataccctagttacaatgtaattataatataattacactgtaactatattgtaactatagtgtaactacactatagctatattattatctatatacaaattagatataaagttgcatatattattttcatgcatatatacaagttatattattgttatagtgtagttctagtggaattatatactatagttagatttgaaaattttccactcaaacaacttgtgacagTttttttagttaatcccattaattattatacattaacaacctgtccagattacaaccaaaataaatctccataacatttttcaatactataattttagtaagttggtagtactgttaattaagttttgatagaataggtcaaatgcgatggtgctaaaattcctcaaacattaccaatatttcataataaactaaatgtgtcaattttattaaaaaaataatatggaattaaatggaaaatatctatacccctaagcttggcaatacttataattattcccacggtccttatactataaagtactgtaatgtagaaaccatttttcgtgggttatccaaaaatcatattagctctagtctatctatctattatatactaaaagttcattaaacttcctacaaacgctttcaagtagctacgtggaactcctataaacgctcctatgcagccacatggcattatctaatctaaccgttgattttcatttaattggtggacccgctattttataccattagattagatctatatgtattgttgattttcatttaaattggtgggcccattattttcaataatcattaggtgtgtatataataccttccctatataaaagtgagaatacgtacgtcgacaaaacaaaaaataccggtacgtatgattcagaaaaaaagaaaagcttccgttcgattcgccggaataaaaaaattgcccatgtcaaaatgagataaaggcaaaaaaacaaaaaaaaatagtacaacgtatcatcggaagaaaaaaaatataaaatataattttctacctataaaataaagcgaaaatccatatgtacgtagtactatatatctatctattatatactaaataaaatccattaaatttcctacaaatactttcaaaccgtcacatggcaccctaatgaaatagagaaatctaaccatcgatattcatttaaatcggtggacttcgttagatctatctttgaataccaaaacctcccacgtccccatatccgtgtaccacgcacgtatcaatttgtaggctccctgttcatttctcttttttatccctatctcaattaaaactaaaattatctttatgaaaaataatctcataaataggcgttaaagtctattaaacctcttataaatatttctaaatcgttgtatgacattcttaaattatagaaacatccatccattggcttccacttaaatatgaacacattattttacatcgttattgatatattttctaataaaaaaacatcccaaaccatattcccttctgctccatccctatacgcgttttgctaagctgccacttgtctcagttaaattagaaaagaaaactaataaatcttagaaaaaaaagatccaaccatcagttttgacttgaacatcagcacattatattttagatcgtcagatcaatcattttttttctaaaaaaagaaacatcccaaccctccctccatccccgttcccgtgcggtgtgcggccttacttttctatgtttttctgtctctatgataattaaaattaTttttatgggcaaagaaaagaccacaagcaaatctccatctattaggtctagccagttattatttttttaagtgaaaacaataacttaatgcccatattgactgtatttaagtgctaacaaaaattacattatggacccacatccatattaaagcctctacttactaaaggtaaaatttactacaagacataaaaaaagtgtaattagctaagagatactgcaagaatgtatatctgctatgagacactgtaaaaaactggtaattagctgttggatacccgcggcattactttgttatatccaatggaaagggggagagaaacaattgcgaaagtatgattttgccccttcctgccaagtgtggctcgcatatagctcagacgtcgtggtagtcacgacatgggaggtggagggtatggcatcgtggcatggcgcggctgtgagactgacagcaatagcttgtgctttgcggcgccctgctcgacatgaatcaggaggaggtccacgttgtgctaaccccaagcgcggtgtgtggcggagcatcaacaccgacatggtcctcgcactgcagcagcgacgagtgcaagaatgacatggagccacgggcccaggcccatgggcccttctcgaaaccccctccccccactggacagccaccttactagcggcgggtgcggttgcagtgtcggaggtgtttgtgagccgaacttggtaggcaaggggcaaaatcatactttcgttatagtttctctctccatttcctttggatattataaaataatgtcacgggtgtccagcaactaaataccagttttttcggtgtcccataactgatacgcgttcttacggtatccccggttaagtacatgttttttagatgtccctagcaaattttaccctaaatatcaactggcacgctaatacatccgaagtcgagctttggacctgcactggagttaagcagatctcccaggccacgtgttttctgtcaacaagggcatgtgttaacaaccaaatttggtagcatctgtgtcaggaaagaagattggatcaaagcaaagttggaggcggagatcgagttcagaaacagagcaggaatcggctggagtctagatcagctacgattgggatcagctgggtctgagtcgggctgagtaagccgatacggccgattccgaaaaaatgacttgtacgcgacatcgggttcaagttaacgtacttccggatgattgccacgcatggatagagtcagaagcttcatagaatggtagatatcttatataatctagatcagcgtcaagatctaacctaatcggctgccttctgcatacagatattggtcgatagtaggttaggtggtgatattgctagagattatgtaagatatatgataacttgacaaattacataaacaagattagaatgtcatgaagatggaagcactaatcataagaatgcaatctgtcataacgaattttacctcttgttgaagatcgaaatcgatgcagctcaacccgaaagcaaaaactcgtcgaaataaaactaaagcgaaaagggtggcgatgcggcgggattgtattgaacgtgtgtgttaaaaattacatagggttcagggtcaatttatacccgaggattacaagatatgcccataccggacacgaccattatctctaacaaactctaagataccataagtctttgcggcagacttttgcccacacttatctataaggaatttacataaaatatcctaactaatagatacaattgtcttcccaggactctatccatgcgtggcaatcatcttgaagtacattaacttgaacccgatgtcacgtacaa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acccgatgtcgcgtacaagttgtattgtcggaatcggccgtattggcttactcagcccgactcagacccagccgatcccaatcgtagccgatctggactccagctgattcctgctctgtttccgaactcgatctccgcctccaactttgctttgatccaatcttctttcctggcacagatgctaccaaatttggttgttaacagcgggctaccttcctagtttatccaaaagcccagaccaaaaataatttttagtcccggtttaaaactaaatgatcattcgtcccggttcattcattgtcaggccacggcaggcaccctagtatctttagtcccgattagtatttataccaaccgggactaaacaaaaagcacgcgcgggagggagctgagacgaaaaagcacgcgtgggagggaaaaataaaatctctatctctctttctctccctcaaccttatctccttactatcctttatcttcttatgtcttctcctccacatcctcctccctcctccccgggggttcccctctcctcccctcccctctccgtcggctacggccatggcagctggatgcggcggcgggcggccgacaaaagcctataattcttttacatagtatttacttttgattattaatttatttcatattatgtatcaaccattataaaattagcatcatatgaaagtatttaaaaagagaatctaacaataaaacatgcttaatttttttaacaatAaaaatgctttataatttgagacggaggaagtcctatcttattcaaacaatgaagtatatacggttatacttatgaagaaacacaattttaataatgttgaataattttaactattcataaatttgttactccctctatttcaggttataagacgttttgattttggtcaaattcaaactgcttgaaatttgaccaagtttgtaaaaaaagtaataatattttcaacccaagacaaaattgttatgaaaatatattcaattattaattcgatgaaactagtttagtattataaatatttttatatttgtgtataaacttagtcaaacttgaaacagattgactttgccaaagttaaaacgtcttataatgaaataattatcaaagtctgaacagaggaactacagcagtgagtattaattactctaaaacagacagttcattttgccgttttcttttacttaccatcttgagcgtcgattattttgtcccgaatgagttccggaacgctgagtatagacgccatgacggcggccgacgccggccagacggcagcggacttcacggcggtgcgccgcgccacgtccagcgcccatatcccgacattgtagtccgtcaccacgcacgtgatcctcccccagccgtcgccgtcgccgtccaccgccgcctcttcctcgccgctccgtcggatgagctcctcgacgcgcggcgccatgtgctcctgcatgagcacggtcagcctcagcaggttgttccggtcctcgtcgggccccatgccgtccggcaccgccacgagcctgatccgattccgccccatccccagctttccgccaccgccggccgccgtctccccattccgccgcggcggcgcgggcatggcggcgacgacgcggccgtggttgaactccgtgttgacgaaggtgacggcgacgccacggacggccagcgcgtgcgcgacctccat
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| CDS seq | atggaggtcgcgcacgcgctggccgtccgtggcgtcgccgtcaccttcgtcaacacggagttcaaccacggccgcgtcgtcgccgccatgcccgcgccgccgcggcggaatggggagacggcggccggcggtggcggaaagctggggatggggcggaatcggatcaggctcgtggcggtgccggacggcatggggcccgacgaggaccggaacaacctgctgaggctgaccgtgctcatgcaggagcacatggcgccgcgcgtcgaggagctcatccgacggagcggcgaggaagaggcggcggtggacggcgacggcgacggctgggggaggatcacgtgcgtggtgacggactacaatgtcgggatatgggcgctggacgtggcgcggcgcaccgccgtgaagtccgctgccgtctggccggcgtcggccgccgtcatggcgtctatactcagcgttccggaactcattcgggacaaaataatcgacgctcaagatgggtcagcactaacgcaagaggccttccagctgtcgccagacatgccggtgatgcacccggctcacctggcgtggaactgcatcggcaacgacgaggggcaggagctgctgttcagttgcgtcctcgctggcatccgtgccatcgacgagtgtgactacatcctctgcaactccttccgcggcgcggaggcggcgacgttcgcgcggttccccaagatcatccccgtcggcccgctcctcaccggcgagcgcccaggcaagcccgtcggccacttctggcgccccgaggacggcgcgtgcatgtcgtggctggacgcgcagccggtgcggtccgtcgtgtacgtcgcctttggcagcttcaccgtgttcgaccggcgccagttccaggagctcgccctgggtctcgagctcaccggccggcctttcctgtgggtggtgcgcccagacatcgtccatggcgacgtgcacgaataccccgacggcttcctggaccgcgtcgtcgcgtccggcattaacggcggtggccgtggcaagctcgtggcgtgggcaccgcagcagcgggtgctggcgcacccggcggtggcgtgcttcgtgtcgcactgcgggtggaactcgaccatggagggcgtccggaacggcgtgccgttcgtggcgtggccgtacttcgccgaccagttcgtcaaccgggcgtacatctgcgacatctggcggatcgtgctcccagccgtcgctgacgagaagtcgggcatggtcacgaaggagcacatcgccggcagagtggtagaggtgatgggagacgccggcatgaggaagaggatcgaggcgatgatggcggtggcacacgagagcattcaggaggatggttgctcccatggcaacttcgacatattcgtggagtcgatcatgtcatga
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| Protein seq | MEVAHALAVRGVAVTFVNTEFNHGRVVAAMPAPPRRNGETAAGGGGKLGMGRNRIRLVAVPDGMGPDEDRNNLLRLTVLMQEHMAPRVEELIRRSGEEEAAVDGDGDGWGRITCVVTDYNVGIWALDVARRTAVKSAAVWPASAAVMASILSVPELIRDKIIDAQDGSALTQEAFQLSPDMPVMHPAHLAWNCIGNDEGQELLFSCVLAGIRAIDECDYILCNSFRGAEAATFARFPKIIPVGPLLTGERPGKPVGHFWRPEDGACMSWLDAQPVRSVVYVAFGSFTVFDRRQFQELALGLELTGRPFLWVVRPDIVHGDVHEYPDGFLDRVVASGINGGGRGKLVAWAPQQRVLAHPAVACFVSHCGWNSTMEGVRNGVPFVAWPYFADQFVNRAYICDIWRIVLPAVADEKSGMVTKEHIAGRVVEVMGDAGMRKRIEAMMAVAHESIQEDGCSHGNFDIFVESIMS |
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| Function | UDP-glycosyltransferase 83A1 [UniProtKB/Swiss-Prot:Q9SGA8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_10g0006960 | OsNaBo_10g0006960.01 | Chr10 | 10913162 | 10954861 | - | NAM | ||
| CDS seq | atggaggtcgcgcacgcgctggccgtccgtggcgtcgccgtcaccttcgtcaacacggagttcaaccacggccgcgtcgtcgccgccatgcccgcgccgccgcggcggaatggggagacggcggccggcggtggcggaaagctggggatggggcggaatcggatcaggctcgtggcggtgccggacggcatggggcccgacgaggaccggaacaacctgctgaggctgaccgtgctcatgcaggagcacatggcgccgcgcgtcgaggagctcatccgacggagcggcgaggaagaggcggcggtggacggcgacggcgacggctgggggaggatcacgtgcgtggtgacggactacaatgtcgggatatgggcgctggacgtggcgcggcgcaccgccgtgaagtccgctgccgtctggccggcgtcggccgccgtcatggcgtctatactcagcgttccggaactcattcgggacaaaataatcgacgctcaagatgggtcagcactaacgcaagaggccttccagctgtcgccagacatgccggtgatgcacccggctcacctggcgtggaactgcatcggcaacgacgaggggcaggagctgctgttcagttgcgtcctcgctggcatccgtgccatcgacgagtgtgactacatcctctgcaactccttccgcggcgcggaggcggcgacgttcgcgcggttccccaagatcatccccgtcggcccgctcctcaccggcgagcgcccaggcaagcccgtcggccacttctggcgccccgaggacggcgcgtgcatgtcgtggctggacgcgcagccggtgcggtccgtcgtgtacgtcgcctttggcagcttcaccgtgttcgaccggcgccagttccaggagctcgccctgggtctcgagctcaccggccggcctttcctgtgggtggtgcgcccagacatcgtccatggcgacgtgcacgaataccccgacggcttcctggaccgcgtcgtcgcgtccggcattaacggcggtggccgtggcaagctcgtggcgtgggcaccgcagcagcgggtgctggcgcacccggcggtggcgtgcttcgtgtcgcactgcgggtggaactcgaccatggagggcgtccggaacggcgtgccgttcgtggcgtggccgtacttcgccgaccagttcgtcaaccgggcgtacatctgcgacatctggcggatcgtgctcccagccgtcgctgacgagaagtcgggcatggtcacgaaggagcacatcgccggcagagtggtagaggtgatgggagacgccggcatgaggaagaggatcgaggcgatgatggcggtggcacacgagagcattcaggaggatggttgctcccatggcaacttcgacatattcgtggagtcgatcatgtcatga
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| Protein seq | MEVAHALAVRGVAVTFVNTEFNHGRVVAAMPAPPRRNGETAAGGGGKLGMGRNRIRLVAVPDGMGPDEDRNNLLRLTVLMQEHMAPRVEELIRRSGEEEAAVDGDGDGWGRITCVVTDYNVGIWALDVARRTAVKSAAVWPASAAVMASILSVPELIRDKIIDAQDGSALTQEAFQLSPDMPVMHPAHLAWNCIGNDEGQELLFSCVLAGIRAIDECDYILCNSFRGAEAATFARFPKIIPVGPLLTGERPGKPVGHFWRPEDGACMSWLDAQPVRSVVYVAFGSFTVFDRRQFQELALGLELTGRPFLWVVRPDIVHGDVHEYPDGFLDRVVASGINGGGRGKLVAWAPQQRVLAHPAVACFVSHCGWNSTMEGVRNGVPFVAWPYFADQFVNRAYICDIWRIVLPAVADEKSGMVTKEHIAGRVVEVMGDAGMRKRIEAMMAVAHESIQEDGCSHGNFDIFVESIMS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0332000 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g18530 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0332000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0006870 | RBH | 0.000000 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0006860 | RBH | 0.000000 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0006570 | RBH | 1.867664 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0007030 | RBH | 0.064000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0006890 | RBH | 8.376249 | 0.0 | 0.353684 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0168100 | RBH | 0.0030765 | 0 | 0.0207685 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0006930 | RBH | 0.0 | 0.0 | 0.180956 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0179600 | RBH | 3.989804 | 0.8236545 | 0.4032815 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0006690 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0006730 | SBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0007110 | RBH | 5.831323 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0006620 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0007200 | RBH | 0.688265 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G006850 | SBH | 0.150257 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0006950 | RBH | 4.739079 | 0.0 | 0.0 |
