Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_09g0018160 | OGI:09062150 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr09:21641655-21644255 | ||||||||
| Gene Symbol | CYP21-1, OsCYP21-1, OsCYP-24 | ||||||||||
| DNA seq | attccacggaggcggagggcgtcgtctgcttcgtcgccgatctcgtctccgccgcccgcgagcgaatcgcccccaaatcgggaggccggctgctctcgcctgcagatttgcgccgtcgttgcggcgaattgatgaggtagaagtgtccaactactcgcccctggttcgcgatgctgcggaaggtggccgtcgccttcctcgcttgcgccgccctctacctcgccttcgccgcctactcccgccgcgaggtatgatgggctttctcttacagttggggacggatttgttcgattcggttgatcagtgacctaccgcgcggcaattcttggcttcgtaggtagtggcaacggagtggaattagactggatctttctgttccactgttgatttgttctacatgatgcagttgggttttagctgctcgcacctacagttctgcaatgtgatgtctgcaattagtatgcttgtgttgcgctgctcgagatgcttcagtagctagacgatattgtttactagtaggattgtagagaacaccatccccataaatcgtttagggggagacttttttctcaccgggccagaagggaaagacttaaagcaaggaatacatatatatgcgagttgctggcatctgactgcacaatgatttctgttttgctgacaacagtagccttattgtacaatgagttgaacctcatgactatggccatcactccttgtctcaagattagaacatggtgtttagattctgaaaaatatatagacgtggggcgctcgtttcattttgtggacgatctgggagataggttctggcctcggttatggtggtagtgactagtgagacgatgattcaatgttacagaatatttattcttctttctcaccttgtacagagccttggagaggttcgattacctgcagttactaacagggtatacttggatgtggaaattgatgggcaacatataggtatatcactatatcatcatgacaatctgtcttggatgttccaatggaaagaataaaacttgttgcttgcaccgttactatacatgtcactcagcttaagccctggttaacctaattcttgtgtgctcccctcattacaggtagaattgtcattggcctttatggagatgttgtgccaaaaacagttggtaatcttacgcccattcttttcttcatcatatttatttacaaacttgagattaatcctttggagacagtggcatagcagattgtggaattcttatgttttgtttgtgtggacaataaatctccccttgaagatactttgattatcatttgtatcatatagtttgtcccatttgtttgctactgtaatataaattggcaataatagcttgttgattttttatttctcattttgcagcaaattttagggctctttgtacaggtatttcttcttcctagatctattcctgttacagctgaaattcaaccttctgttcacatgattatccatgttgcactctgttcactattgcaggagaagagggcattgggcacaagggtaaatctcttcactataaaggatcaagatttcatcgtattatcccaggcttcatgattcagggtggggacatagttagaggtgatggaaaaggaagtgagtctatatatgggggcaccttcccagatgagaatttcatagtaaaacatacacatccaggtcagaaattcagaatgctcaattgatttgtactttctactttacctttatttatgagttatatgtatcgctaagttgcacatttttctcctatacatggagcatagatttttagatattctttatgcgctctgccctgcttctgattatctctcttggtctgctgtcatcatgcaggtgttattgccatggcaaattctggacctgattccaatggatcgcagttttacattaccacaatcaagacaagctggtaagttgtattacactataagttaccagtgatcaatctagatggtacaactcctgaaattataagtaccgcaggttggatggggagcatgttgtgtttggcagggtgattcagggaatggattatgtgtacgccattgaagggggtgctggaacttacaatggcaagcctaggaagaaagttgtaatcaccgactctggtgagataccgaaggagaaatgggctgaagaagtgtaggctgttttgtactttggtttgccctgtactttttgggcagcaggtgcagttttacattaccacaaatcaggcaaggcgtctaaaatgttgtacattgtagttagttcatactcaatcgaatcccacttgctgacactgattactcagtgaattctgcactgtgatgaagatgaacacacatattctcagtttctcatgatggtttagcaaggtagaactgtcttttgtaatgcttcatttttttaaggcaatctgtaatgctttgtttggtattgcagtggtttataactatccctgtaaatttctatttttgatgaaaatagttagtgctgttatttttGggaactaattacaatgcacaatactggttggcctactcagatcaatttatgaaaatatgcacgtgtatgttgttgtc
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| CDS seq | atgctgcggaaggtggccgtcgccttcctcgcttgcgccgccctctacctcgccttcgccgcctactcccgccgcgagagccttggagaggttcgattacctgcagttactaacagggtatacttggatgtggaaattgatgggcaacatataggtagaattgtcattggcctttatggagatgttgtgccaaaaacagttgcaaattttagggctctttgtacaggagaagagggcattgggcacaagggtaaatctcttcactataaaggatcaagatttcatcgtattatcccaggcttcatgattcagggtggggacatagttagaggtgatggaaaaggaagtgagtctatatatgggggcaccttcccagatgagaatttcatagtaaaacatacacatccaggtgttattgccatggcaaattctggacctgattccaatggatcgcagttttacattaccacaatcaagacaagctggttggatggggagcatgttgtgtttggcagggtgattcagggaatggattatgtgtacgccattgaagggggtgctggaacttacaatggcaagcctaggaagaaagttgtaatcaccgactctggtgagataccgaaggagaaatgggctgaagaagtgtag
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| Protein seq | MLRKVAVAFLACAALYLAFAAYSRRESLGEVRLPAVTNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRIIPGFMIQGGDIVRGDGKGSESIYGGTFPDENFIVKHTHPGVIAMANSGPDSNGSQFYITTIKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKVVITDSGEIPKEKWAEEV |
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| Function | Peptidyl-prolyl cis-trans isomerase CYP21-1 [UniProtKB/Swiss-Prot:O49605] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_09g0018160 | OsNaBo_09g0018160.01 | Chr09 | 21641655 | 21644255 | + | NAM | ||
| CDS seq | atgctgcggaaggtggccgtcgccttcctcgcttgcgccgccctctacctcgccttcgccgcctactcccgccgcgagagccttggagaggttcgattacctgcagttactaacagggtatacttggatgtggaaattgatgggcaacatataggtagaattgtcattggcctttatggagatgttgtgccaaaaacagttgcaaattttagggctctttgtacaggagaagagggcattgggcacaagggtaaatctcttcactataaaggatcaagatttcatcgtattatcccaggcttcatgattcagggtggggacatagttagaggtgatggaaaaggaagtgagtctatatatgggggcaccttcccagatgagaatttcatagtaaaacatacacatccaggtgttattgccatggcaaattctggacctgattccaatggatcgcagttttacattaccacaatcaagacaagctggttggatggggagcatgttgtgtttggcagggtgattcagggaatggattatgtgtacgccattgaagggggtgctggaacttacaatggcaagcctaggaagaaagttgtaatcaccgactctggtgagataccgaaggagaaatgggctgaagaagtgtag
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| Protein seq | MLRKVAVAFLACAALYLAFAAYSRRESLGEVRLPAVTNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRIIPGFMIQGGDIVRGDGKGSESIYGGTFPDENFIVKHTHPGVIAMANSGPDSNGSQFYITTIKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKVVITDSGEIPKEKWAEEV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 4.797394 | 0.841033 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0537600 | RBH | 1.272081 | 1.104590 | 3.467841 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g36670 | RBH | 0.885668 | 0.928169 | 0.854726 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0537600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0017910 | RBH | 0.313233 | 22.700766 | 6.222167 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0018000 | RBH | 0.105559 | 1.761455 | 2.096363 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0018220 | RBH | 0.683679 | 5.428887 | 6.712373 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0017970 | RBH | 0.0 | 0.616880 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0018150 | RBH | 2.469059 | 12.736836 | 8.682542 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0355400 | RBH | 4.3083225 | 7.5194335 | 5.3471735 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0017960 | RBH | 0.222618 | 1.457818 | 1.353837 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0343400 | RBH | 4.487178 | 4.359064 | 14.8877145 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0018030 | RBH | 0.068241 | 0.290990 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0017780 | RBH | 0.300743 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0017800 | RBH | 1.942066 | 20.821918 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0017780 | RBH | 0.681122 | 0.0 | 0.846912 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0017910 | RBH | 0.0 | 2.842789 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G018280 | RBH | 0.0 | 6.533218 | 2.026187 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
