Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_09g0017030 | OGI:09059240 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr09:20765948-20770241 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gccggcaaagccaccaagaactccgccgagaagaagaggcgacgagagtgacaggccgaggagggaGggggattcgaggatcgcatgcgccgtgccgccgccgccgccgtgacggtgacgacgacgacgaggatggcggcggaggggatgtccacggccgccgcggcagcggaggcgacggcgacggcggcgcccGcggcggggtcgaggtgggggagggcgtggccgtccgcgctgcgctggatcccgacctccaccgaCcgcatcatcgccgCcgagaagcggctcctctccatagtcaagtatcgctctcccttcgCccccaattttggttCccctttcctccgattaattcaatttcatggactgtcgacaagtccgtgCccgctcgtaaagccgagatgctgaccaccaggacagcgaattgcttaatcgtggtgttacTttgggaTtgggattgggttttgggtaggcactggatttgtaatgagatgttcgcattgcagTctagctcaaaggaggggtattgggactgtacaacggctgttcaccccCccccccccccccccccccctctcgatatgagttttactgcacactggtcgagctgtgtggcagctctgcctgtttGtgtcataattaaattaagcacgtattgttagctactgtttcattctcgagctgtttatctgaattgtactacttgttaagcgtaagttgtgatgggaaacagaatgtttattacttcgccgCatcacaaaagggtggagtttgtttagtggatttagatgtatggaagagacttttttagctggtggcaatctgctCcctctttgagctcacacacagtagcagtgtagcacaatgttaaagatttttctttttcgtaCcaatgaacaaattcacaggaaaacaagcgggtcgtcatatttgatatacattgatctttctacattctgtaatatttaagaatccgtttttgttctcaactacacgggagtgccaATatatttttctgtttctgctcatgtaaggaggcatttataaacttgtgacatccactcctgaacaacctaatggtctaatggtttgtgttagttacaagatacaacctcctaaggttgtattAattgttggtgtggtgtttcttcctggttttatgctctcagctatattgttaacaaatatacttcagttctttcttcattttgctctagatatatctgaggctctttgcaattttctaaTtggtgatgcactttttatatctctttacagaactggctatgtccaagaacaagttaacattggctcctctccacccggatcaaaagttagatggtttagatcatcaagtgatgagccaagattcatcaatactgtaacatttgatagcgaagaaaatgctcccaCccttgtcatggtccatgggtatggtgcttcacagggtttcttctttcgaaactttgatgcccttgcaagccgtttcagggtgattgccattgatcagcttgggtaagttttgagggaaataaagggactctttgtcttgtattcctctatattgtcactcagtatctcgattactttgctcattgtttctcaattatcAaaatagtcctatgaacagcttgttgaactaaaaggatacatagaTtttttttgtgcacaaagtatttgtgtacctatactgacattagagaaaggaaaagtggtgcacgcattgatctaagggttcagTtttttttttatatatatatccgaaacatttcatcacaagttgtggtattgttatacgggaatcggttgcctctattttctcatcttcgtttcatctattttgtgagagctaaatgcagtacttcattcacaggaaaaatccttattcctcatctccaagttagtaaaaaTtagtgtgatgatacctagaagtgcttgtctgatgtatattgttgcaaaaaatgttgtactcatgttcaataatgctctatactgcttttcttagttatttcacattgtgtgatgttgcATaaaattgattttttttgcttcctttgcttttcttagttatttcacattgtgtgatgttgcataaaattgaatttttttgcttcctttgcagttggggtggatcaagtagacctgacttcacttgtaaaagtactgaaggttagattcagataatctatttgttgtgcatctttgaacaaTtttgtcagaacactcttatgtttctgataaccctttgtggccatttgctttcatttccaTttggtgagcatggcatgggccctagtttatggtgaaaaatattagggcaccaTtttctgtaaaactgtagttggctttgtaacaagtactaaaacaaaaccacatgcatgttcagtaattctgttcggcacatgcttatattaaacagtgaagtaacctgttccctttttcctttctgttggttcattttgtgagcagaaactgaggcatggttcatagattcctttgaggaatggcgcaaagcaaagaatctcagtaattttatattgctcggtcactcttttggaggatatgttgcggcaaagtacgctttacaggtatgttcataaaaaaatacagaattagcttcttcattggtgctcatgatagtactgaaactgaaatcctatttcagcatcctgagcacgtccaacacttgatcttggtcggccctgctggcttttcatcagaaacagatcatagctctgagtggttaaccaagttccgagctacatggaaaggcatgctagtgaatcaactatggaagtccaattttactcctcaaagaatagtgaggtaaagcaacttcttgcacttcattactcatatttccaagttactctgtaattttatcctgatatatactgtatttgctttgctgaacagaggattgggtccttggggaccaggcttagttcagagatataccagtgccagatttggctcacattcaacaggtgaattactaacagaacaggaatccacattactgacaggtaattttgttacgccaatctagtacattcaatgtgtcaaattacccatgcaacagaaccttaccgttgctttgttttgaagattacatttaccatactttggctgccaaagctagtggagagttgtgcttaaaacatatattttcctttggggcattcgcgaggaaacctcttctgcaaaggtcagttttcttcgtattaactaaatgtaggagttatgagcaccctggtgatcttgagagcatatgcacaatagttagttgtgttcacacactaattgtgtgatgacctccttgatacttattgacacagtagttcagataacaTtttttttgattttattctgagattttggtcctccttcctttaagggtaatctacaattctacagttcatactttctccatgtagtgacctcctttgttgatactttattaccttgaacatacaagcatggcttcgcaaaaagaaaagggaacatcacattctcgcatctgttcagttagcttctttttccccccctttttatgccaggatatacgattaTtttttttgacgcaacggatatacgattattagctgactcattttccttttgtgatttttcatggtgctcttgtttttagtcataccatgcttctcactgtctcactgccctaaaacttgtaacagtgcatccgattggaaagtgccaactactttcatatatggccaacaagattggatgaattaccaaggtgcacaacaagcacggaaagaaatgaaagtcccctgtgagatcatcagagttccacaggcaagtttttttttttcactgacaatacatatataacagagcttatacaataacattgctgacatttgtgaactcgatggtttattatgcagggaggacattttgtgttcatagataatccttcggggttccactccgcggtcttccacgcatgccgcaagtttctatctggagatggagaggaaggcctctctcttcctgaaggcctaacatcggcctgagatggcgtctcgtacgacaatctcatcatagcaacccagcacgattgatggaaaatactgtgaccgttgtcgccgtcttgtttgtgtttacacgagttgcgtcaacatgtatcatgtagatatatatacacatgtgtacaattgtacaagtagtgagaaacacacgcattgctatgaaatacgaaagtcaatttccatgTtacattagtgcaaattatatatacgaaggtcgatttgtgcttgctgttgtg
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| CDS seq | atgcgccgtgccgccgccgccgccgtgacggtgacgacgacgacgaggatggcggcggaggggatgtccacggccgccgcggcagcggaggcgacggcgacggcggcgcccGcggcggggtcgaggtgggggagggcgtggccgtccgcgctgcgctggatcccgacctccaccgaCcgcatcatcgccgCcgagaagcggctcctctccatagtcaaaactggctatgtccaagaacaagttaacattggctcctctccacccggatcaaaagttagatggtttagatcatcaagtgatgagccaagattcatcaatactgtaacatttgatagcgaagaaaatgctcccaCccttgtcatggtccatgggtatggtgcttcacagggtttcttctttcgaaactttgatgcccttgcaagccgtttcagggtgattgccattgatcagcttggttggggtggatcaagtagacctgacttcacttgtaaaagtactgaagaaactgaggcatggttcatagattcctttgaggaatggcgcaaagcaaagaatctcagtaattttatattgctcggtcactcttttggaggatatgttgcggcaaagtacgctttacagcatcctgagcacgtccaacacttgatcttggtcggccctgctggcttttcatcagaaacagatcatagctctgagtggttaaccaagttccgagctacatggaaaggcatgctagtgaatcaactatggaagtccaattttactcctcaaagaatagtgagaggattgggtccttggggaccaggcttagttcagagatataccagtgccagatttggctcacattcaacaggtgaattactaacagaacaggaatccacattactgacagattacatttaccatactttggctgccaaagctagtggagagttgtgcttaaaacatatattttcctttggggcattcgcgaggaaacctcttctgcaaagtgcatccgattggaaagtgccaactactttcatatatggccaacaagattggatgaattaccaaggtgcacaacaagcacggaaagaaatgaaagtcccctgtgagatcatcagagttccacagggaggacattttgtgttcatagataatccttcggggttccactccgcggtcttccacgcatgccgcaagtttctatctggagatggagaggaaggcctctctcttcctgaaggcctaacatcggcctga
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| Protein seq | MRRAAAAAVTVTTTTRMAAEGMSTAAAAAEATATAAPAAGSRWGRAWPSALRWIPTSTDRIIAAEKRLLSIVKTGYVQEQVNIGSSPPGSKVRWFRSSSDEPRFINTVTFDSEENAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALQHPEHVQHLILVGPAGFSSETDHSSEWLTKFRATWKGMLVNQLWKSNFTPQRIVRGLGPWGPGLVQRYTSARFGSHSTGELLTEQESTLLTDYIYHTLAAKASGELCLKHIFSFGAFARKPLLQSASDWKVPTTFIYGQQDWMNYQGAQQARKEMKVPCEIIRVPQGGHFVFIDNPSGFHSAVFHACRKFLSGDGEEGLSLPEGLTSA |
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| Function | Probable 1-acylglycerol-3-phosphate O-acyltransferase [UniProtKB/Swiss-Prot:Q0J0A4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_09g0017030 | OsNaBo_09g0017030.01 | Chr09 | 20765948 | 20770241 | + | NAM | ||
| CDS seq | atgcgccgtgccgccgccgccgccgtgacggtgacgacgacgacgaggatggcggcggaggggatgtccacggccgccgcggcagcggaggcgacggcgacggcggcgcccGcggcggggtcgaggtgggggagggcgtggccgtccgcgctgcgctggatcccgacctccaccgaCcgcatcatcgccgCcgagaagcggctcctctccatagtcaaaactggctatgtccaagaacaagttaacattggctcctctccacccggatcaaaagttagatggtttagatcatcaagtgatgagccaagattcatcaatactgtaacatttgatagcgaagaaaatgctcccaCccttgtcatggtccatgggtatggtgcttcacagggtttcttctttcgaaactttgatgcccttgcaagccgtttcagggtgattgccattgatcagcttggttggggtggatcaagtagacctgacttcacttgtaaaagtactgaagaaactgaggcatggttcatagattcctttgaggaatggcgcaaagcaaagaatctcagtaattttatattgctcggtcactcttttggaggatatgttgcggcaaagtacgctttacagcatcctgagcacgtccaacacttgatcttggtcggccctgctggcttttcatcagaaacagatcatagctctgagtggttaaccaagttccgagctacatggaaaggcatgctagtgaatcaactatggaagtccaattttactcctcaaagaatagtgagaggattgggtccttggggaccaggcttagttcagagatataccagtgccagatttggctcacattcaacaggtgaattactaacagaacaggaatccacattactgacagattacatttaccatactttggctgccaaagctagtggagagttgtgcttaaaacatatattttcctttggggcattcgcgaggaaacctcttctgcaaagtgcatccgattggaaagtgccaactactttcatatatggccaacaagattggatgaattaccaaggtgcacaacaagcacggaaagaaatgaaagtcccctgtgagatcatcagagttccacagggaggacattttgtgttcatagataatccttcggggttccactccgcggtcttccacgcatgccgcaagtttctatctggagatggagaggaaggcctctctcttcctgaaggcctaacatcggcctga
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| Protein seq | MRRAAAAAVTVTTTTRMAAEGMSTAAAAAEATATAAPAAGSRWGRAWPSALRWIPTSTDRIIAAEKRLLSIVKTGYVQEQVNIGSSPPGSKVRWFRSSSDEPRFINTVTFDSEENAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALQHPEHVQHLILVGPAGFSSETDHSSEWLTKFRATWKGMLVNQLWKSNFTPQRIVRGLGPWGPGLVQRYTSARFGSHSTGELLTEQESTLLTDYIYHTLAAKASGELCLKHIFSFGAFARKPLLQSASDWKVPTTFIYGQQDWMNYQGAQQARKEMKVPCEIIRVPQGGHFVFIDNPSGFHSAVFHACRKFLSGDGEEGLSLPEGLTSA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.519331 | 8.756754 | 10.131016 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0520200 | RBH | 1.607488 | 1.808243 | 6.641373 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g34860 | RBH | 1.061942 | 0.948095 | 1.515625 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0520200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0016920 | RBH | 0.331567 | 24.836550 | 5.162488 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0016930 | RBH | 0.196654 | 4.438162 | 2.965630 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0017150 | RBH | 1.504850 | 25.779930 | 9.531311 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0016900 | RBH | 0.086580 | 0.567357 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0017040 | RBH | 9.826082 | 2.187959 | 14.380030 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0340500 | RBH | 7.4255455 | 16.294611 | 6.132312 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0016890 | RBH | 0.144790 | 2.217221 | 0.961531 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0328600 | RBH | 15.2631875 | 15.7739805 | 8.942087 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0016910 | RBH | 0.070554 | 0.066814 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0016700 | RBH | 0.566311 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0016760 | RBH | 0.000000 | 21.404440 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0016660 | RBH | 0.207262 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0016770 | RBH | 0.375852 | 7.000618 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G017190 | RBH | 0.726876 | 3.042258 | 2.954670 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
