Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_09g0015270 | OGI:09056110 | 5/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr09:19578555-19582821 | ||||||||
| Gene Symbol | OsDjC70 | ||||||||||
| DNA seq | ccataggcaaaaacagttatgcacccatagacaaatggagattgttgttcatgtacaacaaatgccgatctgttgccgcctcagcaacagcattacagaTttaacagcagcgctatttgcacaacacgcgcacctgcctgtacacgacacaaacacaactgaaactgaagggaaaaaaaaagcatgcagaggagtaggacaaccagcactctactacgactaataagcacaaatcatcttgaccaatgtgaccaaccatctaccaggaggaagaaaaataTtgtacaaaatgatgaccctttctggaaccaaagctactaccgcgtccgtcccatatagatcatgggaTtggatccctctgtgcaccGgggggagcggttggcattggaaagttgagtgaagggtaacctccgacgaattgaggggcctccacatacgggctctatcattgacagcgagaggaacagatgtttcagtcttcCGgttgatggagtaaactttgatgtcaaataaacaccttaaTttaaagaacagaaagaaatgaagcatatggtttgaaaatcatttttcatagtatacagtgtcaacatgagtggcacattcaggTTtgttagcattggcaggcagtcAaaacaatttgtgggctgaaacggcaggttgtagatggatacttctacttAatatcagagctctcaatgactgtttttctgctactgtaattttaccattagtctgctggttaaatgtattgctgtacatggcagtatggcaCcacagacatagttgtgttcatagtggTtttgcatgttaattgcctggagatctataggtgcagctcaatgcaacttgacctcattcagtcaccacaaggtacacttatgaaattgatttAaaaatattactagatAaaaatttcttaagagcagcatataacgaaaccttagatgaaCcgagatagttccacttataaaagtcatgcaagacttgtaaaccagacatctgtgggcatgtggcatcgatgatcttactacttagatgagggaTtttcacctggtaatacggtgggTttggatcatatggatgctcccttGgggacattggtgatgaatcaggagaactaccatcattgtcatcagaattatttattgtattgttgattgttgtgacctccccctcactagaaccaagcttaacacgctgtgatatAAaaacccaacttagttcatggaagtacactagacaacttcaaaatcaaaggtacatggataaatatgtcaagaatggtacctggaaaattttGcctagagttttcaatccTttagctcgagctcttaGttcctctCtcctgatagtgctatcttgactcagcactaagatgcttctttAagtcttcctgcAgttgcatgagagctattgcacctgcagaaaTatcagAaaaatcaaatttcatgactaaattacaaatatattctagtatcaacgtagcatatattcAaatctgtatttgtggtaactcAaccaaaaactaatgaaataaaacAatgtttacctgttgcagctgttacttgggatttaatataatggcctttgtttctgaaccattcagctataaatggAacccccaggtatatagctttcTttccaagctccttcgcagcttgtcttgaatatacataaccaatagtactcagcatatcaaccccatacgctgcagggtgagcaaaatgggacaagaaaagactgtgattcataaatgagctggtggcctAaaagcagacaaaatatcagaggttttcctattacattgttgcacagatacaaacatggttttccTtttggtggaaaaaagaggggggaGgggggttcaaGggttgaacaagaaCctgcattagaaagtctggacacctcagcttctgcaaactgcacaaattcctctttgtttccttgaacataaaggtgcaatttgtttttcagtgtctctgcaagtttctcctccctttCcttttgtacaacctgtggttattgttaagtccataaatgagtatttcaaactacagcactaaatgaatgactcatttttccttaatatagctagaatacaactacatcagcaccatcgattgcattctaagttctaacaatcaccaGcagatcaacttgtagTttcaattcctggctatgacaagTttataacgggccattccctctacaacaaatatggaaaAGgggcggaagtgcaagaaagttatcaaggcattgAaaaggctAaatgcatAaaaaaaagatgaactctaaagaattatagcattccaactttcaactttcctttttttagtatgaaaccttaacaattaaagactactgagagaagtAaaatgaacttattcaaatgaactatgttgcatcaaaattataggttgcgaggtggacaacagggaagctacAaggggatcatagtcttgtaggcagaagaaatattgctaaacttccaatcaacgatgagcatgtcaagcatatgtccataaaacttggtgttaaagagccatactcgcattttctcttgcaacatccttgcatcaatctcttcttcgtcaccaaatatatcAagtgaagccatggatgccatcgccaattgaccaatgtaatcctcaaaaagctcactaccAaacagcattgcaaaaattgctgctggatcaattattgcttccctacagaacgttgatgacaaacAggttagaaggtagtcatcacgacatcttacaagatcctacAatatcaagatgagaccaccaattccattgttaaaagtacatctGgtaaagagaGggaactattccttccttctgtaaatggtcaactacggtactacttcaacaacaaaagacttcagtttcttagtgaattgtttccataagtaacaccgttggacgtatttgtcgattagacttacgttgaaataccagatttcccatatgagtcatacgcttgacgttgtgtggggtcactgagtacTtggtatgcctctcccaattcctgatgtcagtttcaccAaatattaacaattaacaaacatgagcaaaaaatcatgcatccttattttcgtgtaaagttttagtagtaccattgattGgttttcaaaatgacaatatggacataatgagctacacacatgtagaatagctattctgaggccatgctgaataaattgcaaaaattactcaaaaatgcactgtgcacgattacatgagcgcagcaatatgcacatgcaggacacataccccttcctgaaccactcatcgcataaatggtttgtcctttggtacaactagggaggAtgaacaaatttcacagtaatccaccctagcatactttatttccgacgagaaacAaaaatcatcacaggacatcgcacgacgttgctagcacagggcatttaacgatgtaaaggctccgctacgtcctgaaagttaagacctacatttttgaagcatctgagtgccacatggggaagcacgaatgcatgatcaccctatatccAaaaaaaattagcactaaatcaacactgctgcacgctatttcctgatcagcgtagacaccgtagccacagaggagttgcaacacgttgctgcggctatggtttaatctcacaatccactggagcatagaaGGggggaaacacattagtatgatgcagccaatacttgcctggaacttcgccgccgcgagcggatcatttgggTtcttgtccggatgcactttcctcgcctgccaacaccagcaaacaaccaccaatcaccaccagcatcagcaacagcAaaaacacaatgagatcaaaCcaaaaccaaaaacgaaagatgaacaagctgccggagagaggagggatcaccttcatgtagtacgccttcttgatCtccacctcggtggccgtcgggcttactcccaGcacgtcgtagtaccccgtctcccttaccatcgaagcaaaatcgatcacccgcttcttcctcctcctacactccgctctcccctCcaaaaaaccaaaccccgatctctctctcctctgagtcgactcgatcggtggcaccgagatctcacgctgctcgtcgcggcggtggtgatgcgatgtgatgtGgagcgtggaggagaagcacagcaacaaccgctgctctggcggcggaGgggaagaggggggaatccgacaataaagcgcttggaataattcgtttttttttcctattttaattgggaagatgagtcacattgacatggg
More
|
||||||||||
| CDS seq | atggtaagggagacggggtactacgacgtgCtgggagtaagcccgacggccaccgaggtggaGatcaagaaggcgtactacatgaaggcgaggaaagtgcatccggacaagaAcccaaatgatccgctcgcggcggcgaagttccaggaattgggagaggcataccaAgtactcagtgaccccacacaacgtcaagcgtatgactcatatgggaaatctggtatttcaacggaagcaataattgatccagcagcaatttttgcaatgctgttTggtagtgagctttttgaggattacattggtcaattggcgatggcatccatggcttcactTgatatatttggtgacgaagaagagattgatgcaaggatgttgcaagagaaaatgcgagttgtacaaaagGaaagggaggagaaacttgcagagacactgaaaaacaaattgcacctttatgttcaaggaaacaaagaggaatttgtgcagtttgcagaagctgaggtgtccagactttctaatgcagcgtatggggttgatatgctgagtactattggttatgtatattcaagacaagctgcgaaggagcttggaaAgaaagctatatacctgggggtTccatttatagctgaatggttcagaaacaaaggccattatattaaatcccaagtaacagctgcaacaggtgcaatagctctcatgcaacTgcaggaagactTaaagaagcatcttagtgctgagaGagaggaaCtaagagctcgagctaaAggattgaaaactctaggCaaaattttccagcgtgttaagcttggttctagtgagggggaggtcacaacaatcaacaatacaataaataattctgatgacaatgatggtagttctcctgattcatcaccaatgtcccCaagggagcatccatatgatccaaAcccaccgtattaccagagcccgtatgtggaggcccctcaattcgtcggaggttacccttcactcaactttccaatgccaaccgctcccccCggtgcacagagggatccaAtcccatga
More
|
||||||||||
| Protein seq | MVRETGYYDVLGVSPTATEVEIKKAYYMKARKVHPDKNPNDPLAAAKFQELGEAYQVLSDPTQRQAYDSYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASMASLDIFGDEEEIDARMLQEKMRVVQKEREEKLAETLKNKLHLYVQGNKEEFVQFAEAEVSRLSNAAYGVDMLSTIGYVYSRQAAKELGKKAIYLGVPFIAEWFRNKGHYIKSQVTAATGAIALMQLQEDLKKHLSAEREELRARAKGLKTLGKIFQRVKLGSSEGEVTTINNTINNSDDNDGSSPDSSPMSPREHPYDPNPPYYQSPYVEAPQFVGGYPSLNFPMPTAPPGAQRDPIP |
||||||||||
| Function | Chaperone protein dnaJ 10 [UniProtKB/Swiss-Prot:Q8GYX8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_09g0015270 | OsNaBo_09g0015270.02 | Chr09 | 19578895 | 19582818 | - | NAM | ||
| CDS seq | atgatccgctcgcggcggcgaagttccagggaagcaataattgatccagcagcaatttttgcaatgctgttTggtagtgagctttttgaggattacattggtcaattggcgatggcatccatggcttcactTgatatatttggtgacgaagaagagattgatgcaaggatgttgcaagagaaaatgcgagttgtacaaaagGaaagggaggagaaacttgcagagacactgaaaaacaaattgcacctttatgttcaaggaaacaaagaggaatttgtgcagtttgcagaagctgaggtgtccagactttctaatgcagcgtatggggttgatatgctgagtactattggttatgtatattcaagacaagctgcgaaggagcttggaaAgaaagctatatacctgggggtTccatttatagctgaatggttcagaaacaaaggccattatattaaatcccaagtaacagctgcaacaggtgcaatagctctcatgcaacTgcaggaagactTaaagaagcatcttagtgctgagaGagaggaaCtaagagctcgagctaaAggattgaaaactctaggCaaaattttccagcgtgttaagcttggttctagtgagggggaggtcacaacaatcaacaatacaataaataattctgatgacaatgatggtagttctcctgattcatcaccaatgtcccCaagggagcatccatatgatccaaAcccaccgtattaccagagcccgtatgtggaggcccctcaattcgtcggaggttacccttcactcaactttccaatgccaaccgctcccccCggtgcacagagggatccaAtcccatga
More
|
|||||||
| Protein seq | MIRSRRRSSREAIIDPAAIFAMLFGSELFEDYIGQLAMASMASLDIFGDEEEIDARMLQEKMRVVQKEREEKLAETLKNKLHLYVQGNKEEFVQFAEAEVSRLSNAAYGVDMLSTIGYVYSRQAAKELGKKAIYLGVPFIAEWFRNKGHYIKSQVTAATGAIALMQLQEDLKKHLSAEREELRARAKGLKTLGKIFQRVKLGSSEGEVTTINNTINNSDDNDGSSPDSSPMSPREHPYDPNPPYYQSPYVEAPQFVGGYPSLNFPMPTAPPGAQRDPIP
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_09g0015270 | OsNaBo_09g0015270.01 | Chr09 | 19578895 | 19582818 | - | NAM | ||
| CDS seq | atggtaagggagacggggtactacgacgtgCtgggagtaagcccgacggccaccgaggtggaGatcaagaaggcgtactacatgaaggcgaggaaagtgcatccggacaagaAcccaaatgatccgctcgcggcggcgaagttccaggaattgggagaggcataccaAgtactcagtgaccccacacaacgtcaagcgtatgactcatatgggaaatctggtatttcaacggaagcaataattgatccagcagcaatttttgcaatgctgttTggtagtgagctttttgaggattacattggtcaattggcgatggcatccatggcttcactTgatatatttggtgacgaagaagagattgatgcaaggatgttgcaagagaaaatgcgagttgtacaaaagGaaagggaggagaaacttgcagagacactgaaaaacaaattgcacctttatgttcaaggaaacaaagaggaatttgtgcagtttgcagaagctgaggtgtccagactttctaatgcagcgtatggggttgatatgctgagtactattggttatgtatattcaagacaagctgcgaaggagcttggaaAgaaagctatatacctgggggtTccatttatagctgaatggttcagaaacaaaggccattatattaaatcccaagtaacagctgcaacaggtgcaatagctctcatgcaacTgcaggaagactTaaagaagcatcttagtgctgagaGagaggaaCtaagagctcgagctaaAggattgaaaactctaggCaaaattttccagcgtgttaagcttggttctagtgagggggaggtcacaacaatcaacaatacaataaataattctgatgacaatgatggtagttctcctgattcatcaccaatgtcccCaagggagcatccatatgatccaaAcccaccgtattaccagagcccgtatgtggaggcccctcaattcgtcggaggttacccttcactcaactttccaatgccaaccgctcccccCggtgcacagagggatccaAtcccatga
More
|
|||||||
| Protein seq | MVRETGYYDVLGVSPTATEVEIKKAYYMKARKVHPDKNPNDPLAAAKFQELGEAYQVLSDPTQRQAYDSYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQLAMASMASLDIFGDEEEIDARMLQEKMRVVQKEREEKLAETLKNKLHLYVQGNKEEFVQFAEAEVSRLSNAAYGVDMLSTIGYVYSRQAAKELGKKAIYLGVPFIAEWFRNKGHYIKSQVTAATGAIALMQLQEDLKKHLSAEREELRARAKGLKTLGKIFQRVKLGSSEGEVTTINNTINNSDDNDGSSPDSSPMSPREHPYDPNPPYYQSPYVEAPQFVGGYPSLNFPMPTAPPGAQRDPIP
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_09g0015270 | OsNaBo_09g0015270.03 | Chr09 | 19578555 | 19582821 | - | IsoSeq | ||
| CDS seq | atgacaatgatggtagttctcctgattcatcaccaatgtcccCaagggagcatccatatgatccaaAcccaccgtattaccagagcccgtatgtggaggcccctcaattcgtcggaggttacccttcactcaactttccaatgccaaccgctcccccCggtgcacagagggatccaAtcccatgatctatatgggacggacgcggtagtagctttggttccagaaagggtcatcattttgtacaAtatttttcttcctcctggtagatggttggtcacattggtcaagatgatttgtgct
More
|
|||||||
| Protein seq | MTMMVVLLIHHQCPQGSIHMIQTHRITRARMWRPLNSSEVTLHSTFQCQPLPPVHRGIQSHDLYGTDAVVALVPERVIILYNIFLPPGRWLVTLVKMICA |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr09 | 19579842 | 19579973 | - | OsNaBo_09g0015270.03 | OsNaBo_09g0015270.03,OsNaBo_09g0015270.02,OsNaBo_09g0015270.01 | All |
| SE | Chr09 | 19581262 | 19582260 | - | OsNaBo_09g0015270.03,OsNaBo_09g0015270.01 | OsNaBo_09g0015270.03,OsNaBo_09g0015270.02,OsNaBo_09g0015270.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 3.987136 | 5.675070 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0493800 | RBH | 1.276948 | 0.624618 | 5.065073 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g32050 | RBH | 0.816956 | 0.429027 | 1.283692 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0493800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0015150 | RBH | 0.193742 | 17.697662 | 12.184772 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0015140 | RBH | 0.123787 | 7.117600 | 1.066693 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0015370 | RBH | 0.000000 | 31.468235 | 11.400100 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0015200 | SBH | 0.034104 | 0.711115 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0015310 | RBH | 2.042806 | 20.223091 | 13.637711 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0310300 | RBH | 9.716056 | 18.9217645 | 12.704187 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0015100 | RBH | 0.092211 | 0.191078 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0014960 | RBH | 0.321960 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0015010 | RBH | 0.0 | 14.896646 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0014870 | RBH | 0.561821 | 0.0 | 1.391424 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0014970 | RBH | 0.169758 | 9.054452 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G015460 | RBH | 0.283384 | 9.964118 | 1.528243 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0022290 | RBH | 1.027280 | 17.538757 | 11.065587 |
