Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_08g0022900 | OGI:08075400 | 15/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr08:28012331-28022590 | ||||||||
| Gene Symbol | OsWD40-163 | ||||||||||
| DNA seq | aaaacaaaccaattaagtactctaccaCcttgagtagttgagtatactctaatataagtggtataagtaggaGtacaggtacatgctcctaggagtacaataccaatttCcacagcaaatcaaccaacatcaatcaGCtcatgaagaataaaataattataaccctgaaCttatgctctatgacaaaaaagaaggccttgtcttaccaagacctaacaggctcaagtactatttggagcagcagacttcctactatggttcaacaacctagtgcagataattcctcagctgaAaaagatgtgcatataagAaaagttaggaacAgaagtatgcagcgcacGttaggaaataacagaagcatctcaatctcttatgaagataaaacacCAaGTctctccgcaataaaacaaggcgtttcaccAatttgattttttttccaagttcttatttggtccAttagatgtctacggtaagttatgtctggtgtgtgaagatagcaccattgttcgaagcttaaaaatgaatagcagtagacactagacaatgtgtgcattgataccataaccatgtaattattgccttaatgccttgtcatacagtaatccttttatccttacacttttagctaTtttttaatggttcccttatctgtttttgtaccagctaattgcaagttcaacaacatcagaaagcacaaaagaatAacttacatttcattctacaaattatggcagtAcattaatcatttcctgggagaggatatgtgagacgccAattaaggtgggcacacccacttttactatgatataaaacctgcaaaaaccaataacatgaacaactagagccgcaaaaaaaaaagagaacaaggtgaacagtcacacttttatcagAatcaacaaacatttgatgtgatttcagtagcatatatAAaggcaaaaattcatctcagttgatgcaataagTtatgaattgtaaatcttgagtttttgacttatgccaatccctggtAaaccatatcaagaaaattttggtgttGtgttTCccattttCttataatgTttaaatataatcttcataaatagccatgcaacacagagcagcgtaacaaaCtagtaaaGggggaaataagcaactcacaactttttggtcacttccccctgtggaaatgtattcgtcattaggagcaacagcaacctgaaatccgtacaatgacaaaattgaagtatctgcaagagtaagctaaaggactacccaGaagaatattggaaagtttaccgcattagcacatcgAttatgcgttaagatatgtctgacacaaggttgacctaaagtaacatcccacattccaacactgcaggtggatagttgaacacTtttggtaagtacgataaaaatAgagtgagaaatggtcgctatgcatatcatcattgtattgtttgctcacctgccatcaccgcttacagtaacaagtACaggttctttatgcaaccactgcatcgcattcaCcccctgatcaccctcatcaacatggctgcaacaacgaatatacttttttctcaaaattcatAaagaGttcatcaaaatagacaataaaatgctatttaagctactaattctcAaaataaatatagggagccccgcaaaggtcataaccataaacatcgttttaaacaacaaattatcactagatgcaataattcgacacttAaatttgatgattacccgggcagttgacttgtatattctgcagtaggcatctgcttgccgtggctcaggcaatgcaaaggccggAaaaaacgcatgtctttacttcgtgaaacatccctgctttGgtttaatggaactagtcttgtgtcccaaaccagtgtgttgtttgatgtgctagaagccgaaaaataggtaccacagttgctaaatgaaacagatgtgacctaaaagcagcagtgcatttaatatcaattctccgggaagAaatatgccagtaaaattaagatattgaaatactaaaagacacactttcaggaatgagccAatgataggtgcagatgatccatgcaacaACatccaacaaATacaacttatgtgcaaatgtaccaaatccatgggatgtgtgaagtaatccatgtactaaacaacaagaaaaattcaatgcttagagttgtggcctgtgctggttgagcgaaaaggaattcccaaacaacacaattgaagttgcgataattttctttcactacattgaatggggatcccaaagggactgaggcacaaaaattgcaaggatAaatgaggactcagatagtgcagaataatcagataattattcaagccactcagcaatcaatcaattatatgctacggcaatatcagcttttagtaaaagtgcaaacaacaaacatcacactcacccgtaaatcaaagcaaatattcaagagaaattactcAaaataggatacaAcccACTagtatatatctggtaacccacagaaagcagtaaagagactacctcacaaccaggtcccactgacaaatgattaattgcagaacaagcacggatatcaaaaagaccaatagtcccatcaccaGaacctgcaaattggagctaacaatatatataatagtctatactgagacagtgatagatgtatactgaatacagcagaaaagaaaatacaacctgtgataatggtgttgccagcagggttggttttaagggaagtaatatactgcaaacacaatgtgttaatgctgtgttcagctctagtctctaaaacattcagcaaaaataataataaaagtacatacagaatcactggcagagaaagataggtacgattctggagactcaatatcccacaattgtaccacagctgaacctccatattcacaatcacttccacatgctagaagattttcactacagaactccattgtatcAattgaaggatagaccatatcctgggacctacatcaacacagaagttgacaatgtttgacagctacattaagatgaattagaaatttgcaagcttaactggaaaaataatatgttgagacatgcaaaccagggacattttaagtttgcaccacgcctatcgataaatagattgcataattgagcaaaaacaaaattaacagtggatgAaaaaaataaatggatcacaaataaagataaccaagaagtttcctttgcccaaggctacctagtagagaatacgtagataatgagtatagcagtaaacatttcaaaatcctcatgcatttagctttAactggtgttaccacttaaacaaaaatgatcataaagacataaactagataatattttatagtatgaatgtatgataggcaagtttttccactgtgcgtggcaattatatgtggggaacagtataaTtgcaaaatatgacatacaatattttgcacaacaaaagcattctacctagttatgtagccaaggacccgattaagctgaattAaaaaaaatcagctcaataacaataaggttctgtgcaattgtacattagtgtcattcgctcactaacccttatagacAaaactgccaagagctagtttccaagctcaTGtgagaagtggttaaacagcttgtaTtttagtcaaaataatatacgaccactttaaatacttatgtgcatattagcgcatagcgcgcgcatctttttcactgcatgAatattggagtgacacaacgctagacaaaaggagtaggctgggataagaagaacatacactaaacaaaagtcaaataaatgacggaataaggAaagttccagtttacctcaagtttgaatttagatcagaagcgagttctcctctcaaagcattccacagtagaagcttaccatcaccttttgctccactagtgacaacaagacctatgaacatgcgatgtgttagagaactaatattactgaaactagaaatAaaaaatagatatgtataaagaatttgacggagcagaacaaggtttggaatacagcaaataagcagagttccacgcggtaacaaatataaagcaaaagagctAaaatacttagggcaccaatagaaaTttttttatcccagtgatcattcattttatttataatagatatcccgaaacacatAaaacaatagtataagagggtatgcagaaaatacaatactatatacaggcatagggaaggtaccaaatcagtgaagtgCcaagatgagctaagtaacacattgttaactgtaatgtactAatgtagaatgaattggcctatacaacccattaagtcaaggttttgcctctttcccacgtattatcagatcaatcacttgaaaagttcacaattcaaaactaacacctgtcatacggaaacagaacagatgtaggaatctactagatgcagtacagaaaggctgacaaaagaattagcttacaggattgccatttattaacagccatagcattaattttttgagtatgtcccactgaattgtgatcgtcaccacctaaGgtatagaggcaagaccctgtaatgcaatcccatacctatagtccatatatgaaaaaaaaaatcaacaTaatgttttcctgctaattatttcagcaacaattagaactgAagaaagaaaataaaagtcttgagttacctttaatagattagaaccacaagatactatgcttgctcctttcaccgcAaatgcggtaGcctggatctgaggaaataaaATtaaataatcagcatagcaaaagcaaaaaataaaaacctataagtacAaaaaaactctcaaACcatcagcctctgtgaattgaaagctatgtttgttgcacgtgcatgattaTtgtaactgtaaaTttcttatgctgcagtagtaccacatcattattcacTtaattactgaagtacatatgcagggcagacagacatgatgtaaggattgaagagacatggttgaacatttgacaaacaaatcatttgtaTtttccatgaacatggacttaaactctataaagTtttttctatcccaggtacaggtaggatagcatatatattttttaagcaaaaatgcaaaaaggaggaaaggtaTttatggatttagtatcccagAaaatatttagtaaatatacaaattactcattcagcATaccttggtattgtggcctctaagttgagtagctcttccagaaagaagattgaaaagcaacaattcattcggtgcctgaattaatggaatagcactatgatttatgaataaatcaatccaataattatggagacactgtaatgatgtcccaaaggtaaccatcaaaatacgcagaaagaATatcacactcatttccagGcctcttcttcggatttctgctctctgctagaaaatattgactagataatgcaccaagaacagttctattaccaacctcattagagcaagagacaagctgaggcaacccttctggatgaaactttacatcaagaactttgcgtacaccttgctgagccattacaatagaaaacaaataaataggttagattAaaaaaaattatcataatcaagcacagctagacgatcaatcacgttAatttagttccgcaaagagattttggctttctgctttggtattaaacgaaaatgcatgtatagagccaacaaaaatatgataagtgagctgcatatgagttcttcatggcctcaatgagatataggAaaaaggtagaccggatattcaacattttgaaatgttttttcaattctggaagcatccAagactaccacccaaaaataattttccccacctctgcattttccaatataaaactttagcactgttaatattgtcaacatcacaacatacatacatacaactccagccagatgatgtcaatatcgcaacctgtcAaagttgccaagctatgtagatgtagacagtATGtttttttcaccTtttccaatggaagcatactagaagaaaaattagaaaatagtgtgttgaattaaaacttaaaagcataatggagaatgcaatgtaaatgtacaccaaaagaataaatgaaattgcataaccaaaaagaagaccagagcaaactgccagctgacaactctttGgacttcatagtgccatgcaaattaatttgagatccataccctgtcatgaggctgagcagaaggagcgcttgacgtataagcacatgaagtcggacaccaagataagtAactttgtttcacgacatgtacagcaggaccttcaaactggaccgcaggtgaattccatcctaatAaaaataatcaacaaaaatcAattatgatattAaaaataaggaaactacaactacagattcaaagtaacagagaactgctgagtgctgaataatacaatctctctgtttcagattacttctcattctagcaaatctcacactaactaaggagctgtgtcaaattacattgttccctaactaagatgtgagaatgacaattaTtttggtaaaaaaaaatgaatcctagaacaagtaattgaaacggagggaatattaTttagagaacaaacaaagcataccttcaagaaaggggctccatctttcacaattccttccagcgtgacctccatttgaacaagtttgagaccagttggcaccagcttcacgcccttctagacagaacagtatgtttttcttaatggatctttgtggaaacgatggattaacatgtcccttccaaatatcataacttcttgcaccattgctatgtgaactagaattttgctcatgctgcaaagttcctgtcaccacaagtagatacagatttttttttagcaacAaatataaaatattgcaatcatatagctgatgaaaatgcagagcttcaatacaatttatgtagccatggatGAAcatgtgaaaagaaaatggcaacacaccagaattcctaggtgcatcccagtatgccAgtaggacatatgaaagcatagtcacaaaataacaaatcaaactttcacagaaaatgtgttggaccaataggacgtagtacttctcagcttgtatcaaatagaacaacaGATgattaatctttccaccaagcgaaaggacaaaCctgttgtagcttcactataacaccaagcaggtgttacaattatagggttccTttttctcttctggccaaattcaTtgtctgctgctccttggtttggctgttcgttgcaataaatcttcgtcacctctgtaggggttgatgtgcttgcagtagcagccccttcttgcatacttacaTtagtctctggcttctgaaaatctgTttctttaatagcaacagtgcggcgattctttaacaacacactggtcaactgattctgcaagtctgtcaaactgaaacacgactattaatattttagtgcaagcAattaaaaaaaccaaacagaggtataacccagggttagctaagctaagagtgacgtacagttcatatttaaggaaagcttccttttttttggatagtgacatcttcttgtcccttataggagcatcgccgcccacaaatctgcttgcactaacacctggaaaacAaataggatgctgtattatttagaagaccatgagaaaacatcacttcaagaaacaaatgcaaaatcattgaaaggataacctgtcactggaggtagagatttcctcacagttggtgtgctttcttgtGggataactggagaagcactcgctgggaccgtggctctagccgcagaaagttgtagactctgttgaccaaatgcaaataatgtaaagTtagcatcttagaaaagggacaacaaagatgccaattcaagaattgtaagagcaaggacaaaataattatttgcaaggaaccaacggtgtagcaagatatatttaaaagagacacttgtgaaaatagaaaaatgactgcaatatagtgtgcatgagtctatgcaataaactggcatcaaattgctacatgagatacaattacttcaaataattccttgaaaagcaactgcctgagccctgaagtaatccaattgaaaaaaaaaaaaacctagtgctccttcattgtaaaataataataggtgctcctttgGAGgagactggattctttaggctgtgttcGggaggtaaggttgggcgcacataaaAcggagtgacgcattttcttatgattaatttatttactaTttttttaaaaaaaagtggaataatatgatttttttaaagcAactttcgtatagaaattttttgcaaaaaacacaCcgtttagcagtttgaaaagcgtgcgtgcggaaaacgagggaggtgaattGggaaagtttgggaaagaactcagccttagtatgatagacaaatgctccgccaaagtgacataacAacacctcaatataaccagatctttgtatgtagaaatagcatataaatatatggtacaatagacataaaatctcgctaattgaggcccagtgtctaactgtaattaccattctcaagccaccagtctgccaccaccctcaccAaagacacaaactactgtacatatctatttcTttgaggtgcataatgttatggtttgtgaagttgagctatgctctatggaacattGgaacagtttttcctacttacagactaatgtttaatcttacatgtgcggtatcgactgcacttaactcttacccatcattatcAacttccttcttttaaatacacacacacatacatctgaactgccAaattggtgctttagggaaactactgtatcattacagccatataactatattgcatatcggtgtgccataggttctttccaattgctatcgtaagctaataataatagaaacagagataaaatgaaaaaaggaagaatactcgggtgctAaatatgggtagaacattcagcaataagaagataccaactactagaaaatataattaacttttgataggcctttatgaaaaaatcataaatattttatcctttgcttagcaacacctttaggaaatagagcgaaaatataacatttttttgcactaccccatcaaagtggatcagaaattatgtaccttcggtatcttccccctcttcttcagaagcttcaagtgcatcctctgggtGtagtgtatcaaaTGatattttgaatgcttctcaaccaacctgtccattatctgtgggTttgatgtaagccactccgatatctcctttgatgtaactagcgactctagctcaagagattccaaccacttgtacacaggcttccAaagatcagtccgctggaacctatacgggaaagcactttggtctgcatctaaaacctacgcataggtgaaaataaaatgtcagtctgaatcagtgatcaattggAaaaatctggtaaacagctaaatccaacaggcctggcgaacagcagttctacatgatagaaaccctaggaagctcacaaacatcgttaaccAaagaggcaaagagttcaaatgtttaattagctctaacagttccaatctgtcccagttcagctattctgcaattcagaaaggcaaatcagccatatcaacactgaacagatccatttcaaagggctgaagtccAtcagcctttctagcatgatAacatacattaatacttgacagacctgttccatgactagtagcaatcaagcaactgaacattcacaaacagactccacttgactgatacAaaaaattgctcaacccagacgctaccagaatctccattatggttaagtgcccaagctaatcgatccaatttgacttaaaatcgatggatacacctgataatcccgtaagcaatgtgcgaatctcccgTgggtaacacgaagagaaGgggttacctggtcgccgcggagggcgaggaggcgctggtggagctgggagcGggggagggaGgggagctcggggcggtggacgtcgatgtaggcgtcgacctcggcctcggtgggcgggcggccgtcGgggaaggactcgagccaggcgcgcgcggcgatctcccatgggtgcgggggccgcgaggaggagaaggtgggcggcggcgcggcGgggggagcgggcgggttgggggcgtggccggcgtggctgtggcggtggcgggcgtggcggtggcggtggcggtggcggtggcggtggcggcggcGggggtggacGgggagtggaacggcgccgggagcgggggcgggagcggcgcgtccggcGggagcgcgcggagcgggaggatggcctgcggctccggcatttgcgccggctagggcggccggcggcgggcggt
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| CDS seq | atgccggagccgcaggccatcctcccgctccgcgcgctccCgccggacgcgccgctcccgcccccgctcccggcgccgttccactcccCgtccaccccCgccgccgccaccgccaccgccaccgccaccgccaccgccacgcccgccaccgccacagccacgccggccacgcccccaacccgcccgctcccccCgccgcgccgccgcccaccttctcctcctcgcggcccccgcacccatgggagatcgccgcgcgcgcctggctcgagtccttcccCgacggccgcccgcccaccgaggccgaggtcgacgcctacatcgacgtccaccgccccgagctcccCtccctccccCgctcccagctccaccagcgcctcctcgccctccgcggcgaccagaatagctgaactgggacagattggaactgttttagatgcagaccaaagtgctttcccgtataggttccagcggactgatcttTggaagcctgtgtacaagtggttggaatctcttgagctagagtcgctagttacatcaaaggagatatcggagtggcttacatcaaAcccacagataatggacaggttggttgagaagcattcaaaatatCAtttgatacactaCacccagaggatgcacttgaagcttctgaagaagagggggaagataccgaagagtctacaactttctgcggctagagccacggtcccagcgagtgcttctccagttatccCacaagaaagcacaccaactgtgaggaaatctctacctccagtgacaggtgttagtgcaagcagatttgtgggcggcgatgctcctataagggacaagaagatgtcactatccaaaaaaaaggaagctttccttaaatatgaacttttgacagacttgcagaatcagttgaccagtgtgttgttaaagaatcgccgcactgttgctattaaagaaAcagattttcagaagccagagactaAtgtaagtatgcaagaaggggctgctactgcaagcacatcaacccctacagaggtgacgaagatttattgcaacgaacagccaaaccaaggagcagcagacaAtgaatttggccagaagagaaaaAggaaccctataattgtaacacctgcttggtgttatagtgaagctacaacaggaactttgcagcatgagcaaaattctagttcacatagcaatggtgcaagaagttatgatatttggaagggacatgttaatccatcgtttccacaaagatccattaagaaaaacatactgttctgtctagaagggcgtgaagctggtgccaactggtctcaaacttgttcaaatggaggtcacgctggaaggaattgtgaaagatggagcccctttcttgaaggatggaattcacctgcggtccagtttgaaggtcctgctgtacatgtcgtgaaacaaagtTacttatcttggtgtccgacttcatgtgcttatacgtcaagcgctccttctgctcagcctcatgacaggcaaggtgtacgcaaagttcttgatgtaaagtttcatccagaagggttgcctcagcttgtctcttgctctaatgaggttggtaatagaactgttcttggtgcattatctagtcaatattttctagcagagagcagaaatccgaagaagaggCctggaaatgagtgtgatATtctttctgcgtattttgatggttacctttgggacatcattacagcaccgaatgaattgttgcttttcaatcttctttctggaagagctactcaacttagaggccacaataccaagatccaggCtaccgcattTgcggtgaaaggagcaagcatagtatcttgtggttctaatctattaaaggtatgggattgcattacagggtcttgcctctatacCttaggtggtgacgatcacaattcagtgggacatactcaaaaaattaatgctatggctgttaataaatggcaatcctgtcttgttgtcactagtggagcaaaaggtgatggtaagcttctactgtggaatgctttgagaggagaactcgcttctgatctaaattcaaacttgaggtcccaggatatggtctatccttcaatTgatacaatggagttctgtagtgaaaatcttctagcatgtggaagtgattgtgaatatggaggttcagctgtggtacaattgtgggatattgagtctccagaatcgtacctatctttctctgccagtgattcttatattacttcccttaaaaccaaccctgctggcaacaccattatcacaggttCtggtgatgggactattggtctttttgatatccgtgcttgttctgcaattaatcatttgtcagtgggacctggttgtgaggtcacatctgtttcatttagcaactgtggtacctatttttcggcttctagcacatcaaacaacacactggtttgggacacaagactagttccattaaacCaaagcagggatgtttcacgaagtaaagacatgcgtttttTccggcctttgcattgcctgagccacggcaagcagatgcctactgcagaatatacaagtcaactgcccggccatgttgatgagggtgatcaggggGtgaatgcgatgcagtggttgcataaagaacctGTacttgttactgtaagcggtgatggcagtgttggaatgtgggatgttactttaggtcaaccttgtgtcagacatatcttaacgcataaTcgatgtgctaatgcggttgctgttgctcctaatgacgaatacatttccacagggggaagtgaccaaaaagttgtgagttgcttatttccccCtttactaGtttgttacgctgctctgttttatatcatagtaaaagtgggtgtgcccaccttaatTggcgtctcacatatcctctcccaggaaatgattaatgTactgccataa
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| Protein seq | MPEPQAILPLRALPPDAPLPPPLPAPFHSPSTPAAATATATATATATPATATATPATPPTRPLPPPRRRPPSPPRGPRTHGRSPRAPGSSPSPTAARPPRPRSTPTSTSTAPSSPPSPAPSSTSASSPSAATRIAELGQIGTVLDADQSAFPYRFQRTDLWKPVYKWLESLELESLVTSKEISEWLTSNPQIMDRLVEKHSKYHLIHYTQRMHLKLLKKRGKIPKSLQLSAARATVPASASPVIPQESTPTVRKSLPPVTGVSASRFVGGDAPIRDKKMSLSKKKEAFLKYELLTDLQNQLTSVLLKNRRTVAIKETDFQKPETNVSMQEGAATASTSTPTEVTKIYCNEQPNQGAADNEFGQKRKRNPIIVTPAWCYSEATTGTLQHEQNSSSHSNGARSYDIWKGHVNPSFPQRSIKKNILFCLEGREAGANWSQTCSNGGHAGRNCERWSPFLEGWNSPAVQFEGPAVHVVKQSYLSWCPTSCAYTSSAPSAQPHDRQGVRKVLDVKFHPEGLPQLVSCSNEVGNRTVLGALSSQYFLAESRNPKKRPGNECDILSAYFDGYLWDIITAPNELLLFNLLSGRATQLRGHNTKIQATAFAVKGASIVSCGSNLLKVWDCITGSCLYTLGGDDHNSVGHTQKINAMAVNKWQSCLVVTSGAKGDGKLLLWNALRGELASDLNSNLRSQDMVYPSIDTMEFCSENLLACGSDCEYGGSAVVQLWDIESPESYLSFSASDSYITSLKTNPAGNTIITGSGDGTIGLFDIRACSAINHLSVGPGCEVTSVSFSNCGTYFSASSTSNNTLVWDTRLVPLNQSRDVSRSKDMRFFRPLHCLSHGKQMPTAEYTSQLPGHVDEGDQGVNAMQWLHKEPVLVTVSGDGSVGMWDVTLGQPCVRHILTHNRCANAVAVAPNDEYISTGGSDQKVVSCLFPPLLVCYAALFYIIVKVGVPTLIGVSHILSQEMINVLP |
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| Function | Uncharacterized WD repeat-containing protein alr2800 [UniProtKB/Swiss-Prot:Q8YTC2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_08g0022900 | OsNaBo_08g0022900.02 | Chr08 | 28012331 | 28022590 | - | NAM | ||
| CDS seq | atgccggagccgcaggccatcctcccgctccgcgcgctccCgccggacgcgccgctcccgcccccgctcccggcgccgttccactcccCgtccaccccCgccgccgccaccgccaccgccaccgccaccgccaccgccacgcccgccaccgccacagccacgccggccacgcccccaacccgcccgctcccccCgccgcgccgccgcccaccttctcctcctcgcggcccccgcacccatgggagatcgccgcgcgcgcctggctcgagtccttcccCgacggccgcccgcccaccgaggccgaggtcgacgcctacatcgacgtccaccgccccgagctcccCtccctccccCgctcccagctccaccagcgcctcctcgccctccgcggcgaccagaatagctgaactgggacagattggaactgttttagatgcagaccaaagtgctttcccgtataggttccagcggactgatcttTggaagcctgtgtacaagtggttggaatctcttgagctagagtcgctagttacatcaaaggagatatcggagtggcttacatcaaAcccacagataatggacaggttggttgagaagcattcaaaatatCAtttgatacactaCacccagaggatgcacttgaagcttctgaagaagagggggaagataccgaagagtctacaactttctgcggctagagccacggtcccagcgagtgcttctccagttatccCacaagaaagcacaccaactgtgaggaaatctctacctccagtgacaggtgttagtgcaagcagatttgtgggcggcgatgctcctataagggacaagaagatgtcactatccaaaaaaaaggaagctttccttaaatatgaacttttgacagacttgcagaatcagttgaccagtgtgttgttaaagaatcgccgcactgttgctattaaagaaAcagattttcagaagccagagactaAtgtaagtatgcaagaaggggctgctactgcaagcacatcaacccctacagaggtgacgaagatttattgcaacgaacagccaaaccaaggagcagcagacaAtgaatttggccagaagagaaaaAggaaccctataattgtaacacctgcttggtgttatagtgaagctacaacaggaactttgcagcatgagcaaaattctagttcacatagcaatggtgcaagaagttatgatatttggaagggacatgttaatccatcgtttccacaaagatccattaagaaaaacatactgttctgtctagaagggcgtgaagctggtgccaactggtctcaaacttgttcaaatggaggtcacgctggaaggaattgtgaaagatggagcccctttcttgaaggatggaattcacctgcggtccagtttgaaggtcctgctgtacatgtcgtgaaacaaagtTacttatcttggtgtccgacttcatgtgcttatacgtcaagcgctccttctgctcagcctcatgacaggcaaggtgtacgcaaagttcttgatgtaaagtttcatccagaagggttgcctcagcttgtctcttgctctaatgaggttggtaatagaactgttcttggtgcattatctagtcaatattttctagcagagagcagaaatccgaagaagaggCctggaaatgagtgtgatATtctttctgcgtattttgatggttacctttgggacatcattacagcaccgaatgaattgttgcttttcaatcttctttctggaagagctactcaacttagaggccacaataccaagatccaggCtaccgcattTgcggtgaaaggagcaagcatagtatcttgtggttctaatctattaaaggtatgggattgcattacagggtcttgcctctatacCttaggtggtgacgatcacaattcagtgggacatactcaaaaaattaatgctatggctgttaataaatggcaatcctgtcttgttgtcactagtggagcaaaaggtgatggtaagcttctactgtggaatgctttgagaggagaactcgcttctgatctaaattcaaacttgaggtcccaggatatggtctatccttcaatTgatacaatggagttctgtagtgaaaatcttctagcatgtggaagtgattgtgaatatggaggttcagctgtggtacaattgtgggatattgagtctccagaatcgtacctatctttctctgccagtgattcttatattacttcccttaaaaccaaccctgctggcaacaccattatcacaggttCtggtgatgggactattggtctttttgatatccgtgcttgttctgcaattaatcatttgtcagtgggacctggttgtgaggtcacatctgtttcatttagcaactgtggtacctatttttcggcttctagcacatcaaacaacacactggtttgggacacaagactagttccattaaacCaaagcagggatgtttcacgaagtaaagacatgcgtttttTccggcctttgcattgcctgagccacggcaagcagatgcctactgcagaatatacaagtcaactgcccggccatgttgatgagggtgatcaggggGtgaatgcgatgcagtggttgcataaagaacctGTacttgttactgtaagcggtgatggcagtgttggaatgtgggatgttactttaggtcaaccttgtgtcagacatatcttaacgcataaTcgatgtgctaatgcggttgctgttgctcctaatgacgaatacatttccacagggggaagtgaccaaaaagttgtgagttgcttatttccccCtttactaGtttgttacgctgctctgttttatatcatagtaaaagtgggtgtgcccaccttaatTggcgtctcacatatcctctcccaggaaatgattaatgTactgccataa
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| Protein seq | MPEPQAILPLRALPPDAPLPPPLPAPFHSPSTPAAATATATATATATPATATATPATPPTRPLPPPRRRPPSPPRGPRTHGRSPRAPGSSPSPTAARPPRPRSTPTSTSTAPSSPPSPAPSSTSASSPSAATRIAELGQIGTVLDADQSAFPYRFQRTDLWKPVYKWLESLELESLVTSKEISEWLTSNPQIMDRLVEKHSKYHLIHYTQRMHLKLLKKRGKIPKSLQLSAARATVPASASPVIPQESTPTVRKSLPPVTGVSASRFVGGDAPIRDKKMSLSKKKEAFLKYELLTDLQNQLTSVLLKNRRTVAIKETDFQKPETNVSMQEGAATASTSTPTEVTKIYCNEQPNQGAADNEFGQKRKRNPIIVTPAWCYSEATTGTLQHEQNSSSHSNGARSYDIWKGHVNPSFPQRSIKKNILFCLEGREAGANWSQTCSNGGHAGRNCERWSPFLEGWNSPAVQFEGPAVHVVKQSYLSWCPTSCAYTSSAPSAQPHDRQGVRKVLDVKFHPEGLPQLVSCSNEVGNRTVLGALSSQYFLAESRNPKKRPGNECDILSAYFDGYLWDIITAPNELLLFNLLSGRATQLRGHNTKIQATAFAVKGASIVSCGSNLLKVWDCITGSCLYTLGGDDHNSVGHTQKINAMAVNKWQSCLVVTSGAKGDGKLLLWNALRGELASDLNSNLRSQDMVYPSIDTMEFCSENLLACGSDCEYGGSAVVQLWDIESPESYLSFSASDSYITSLKTNPAGNTIITGSGDGTIGLFDIRACSAINHLSVGPGCEVTSVSFSNCGTYFSASSTSNNTLVWDTRLVPLNQSRDVSRSKDMRFFRPLHCLSHGKQMPTAEYTSQLPGHVDEGDQGVNAMQWLHKEPVLVTVSGDGSVGMWDVTLGQPCVRHILTHNRCANAVAVAPNDEYISTGGSDQKVVSCLFPPLLVCYAALFYIIVKVGVPTLIGVSHILSQEMINVLP
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_08g0022900 | OsNaBo_08g0022900.01 | Chr08 | 28012331 | 28022590 | - | NAM | ||
| CDS seq | atgccggagccgcaggccatcctcccgctccgcgcgctccCgccggacgcgccgctcccgcccccgctcccggcgccgttccactcccCgtccaccccCgccgccgccaccgccaccgccaccgccaccgccaccgccacgcccgccaccgccacagccacgccggccacgcccccaacccgcccgctcccccCgccgcgccgccgcccaccttctcctcctcgcggcccccgcacccatgggagatcgccgcgcgcgcctggctcgagtccttcccCgacggccgcccgcccaccgaggccgaggtcgacgcctacatcgacgtccaccgccccgagctcccCtccctccccCgctcccagctccaccagcgcctcctcgccctccgcggcgaccagaatagctgaactgggacagattggaactgttttagatgcagaccaaagtgctttcccgtataggttccagcggactgatcttTggaagcctgtgtacaagtggttggaatctcttgagctagagtcgctagttacatcaaaggagatatcggagtggcttacatcaaAcccacagataatggacaggttggttgagaagcattcaaaatatCAtttgatacactaCacccagaggatgcacttgaagcttctgaagaagagggggaagataccgaagagtctacaactttctgcggctagagccacggtcccagcgagtgcttctccagttatccCacaagaaagcacaccaactgtgaggaaatctctacctccagtgacaggtgttagtgcaagcagatttgtgggcggcgatgctcctataagggacaagaagatgtcactatccaaaaaaaaggaagctttccttaaatatgaacttttgacagacttgcagaatcagttgaccagtgtgttgttaaagaatcgccgcactgttgctattaaagaaAcagattttcagaagccagagactaAtgtaagtatgcaagaaggggctgctactgcaagcacatcaacccctacagaggtgacgaagatttattgcaacgaacagccaaaccaaggagcagcagacaAtgaatttggccagaagagaaaaAggaaccctataattgtaacacctgcttggtgttatagtgaagctacaacaggaactttgcagcatgagcaaaattctagttcacatagcaatggtgcaagaagttatgatatttggaagggacatgttaatccatcgtttccacaaagatccattaagaaaaacatactgttctgtctagaagggcgtgaagctggtgccaactggtctcaaacttgttcaaatggaggtcacgctggaaggaattgtgaaagatggagcccctttcttgaaggatggaattcacctgcggtccagtttgaaggtcctgctgtacatgtcgtgaaacaaagtTacttatcttggtgtccgacttcatgtgcttatacgtcaagcgctccttctgctcagcctcatgacaggcaaggtgtacgcaaagttcttgatgtaaagtttcatccagaagggttgcctcagcttgtctcttgctctaatgaggcaccgaatgaattgttgcttttcaatcttctttctggaagagctactcaacttagaggccacaataccaagatccaggCtaccgcattTgcggtgaaaggagcaagcatagtatcttgtggttctaatctattaaaggtatgggattgcattacagggtcttgcctctatacCttaggtggtgacgatcacaattcagtgggacatactcaaaaaattaatgctatggctgttaataaatggcaatcctgtcttgttgtcactagtggagcaaaaggtgatggtaagcttctactgtggaatgctttgagaggagaactcgcttctgatctaaattcaaacttgaggtcccaggatatggtctatccttcaatTgatacaatggagttctgtagtgaaaatcttctagcatgtggaagtgattgtgaatatggaggttcagctgtggtacaattgtgggatattgagtctccagaatcgtacctatctttctctgccagtgattcttatattacttcccttaaaaccaaccctgctggcaacaccattatcacaggttCtggtgatgggactattggtctttttgatatccgtgcttgttctgcaattaatcatttgtcagtgggacctggttgtgaggtcacatctgtttcatttagcaactgtggtacctatttttcggcttctagcacatcaaacaacacactggtttgggacacaagactagttccattaaacCaaagcagggatgtttcacgaagtaaagacatgcgtttttTccggcctttgcattgcctgagccacggcaagcagatgcctactgcagaatatacaagtcaactgcccggccatgttgatgagggtgatcaggggGtgaatgcgatgcagtggttgcataaagaacctGTacttgttactgtaagcggtgatggcagtgttggaatgtgggatgttactttaggtcaaccttgtgtcagacatatcttaacgcataaTcgatgtgctaatgcggttgctgttgctcctaatgacgaatacatttccacagggggaagtgaccaaaaagttgttttatatcatagtaaaagtgggtgtgcccaccttaatTggcgtctcacatatcctctcccaggaaatgattaa
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| Protein seq | MPEPQAILPLRALPPDAPLPPPLPAPFHSPSTPAAATATATATATATPATATATPATPPTRPLPPPRRRPPSPPRGPRTHGRSPRAPGSSPSPTAARPPRPRSTPTSTSTAPSSPPSPAPSSTSASSPSAATRIAELGQIGTVLDADQSAFPYRFQRTDLWKPVYKWLESLELESLVTSKEISEWLTSNPQIMDRLVEKHSKYHLIHYTQRMHLKLLKKRGKIPKSLQLSAARATVPASASPVIPQESTPTVRKSLPPVTGVSASRFVGGDAPIRDKKMSLSKKKEAFLKYELLTDLQNQLTSVLLKNRRTVAIKETDFQKPETNVSMQEGAATASTSTPTEVTKIYCNEQPNQGAADNEFGQKRKRNPIIVTPAWCYSEATTGTLQHEQNSSSHSNGARSYDIWKGHVNPSFPQRSIKKNILFCLEGREAGANWSQTCSNGGHAGRNCERWSPFLEGWNSPAVQFEGPAVHVVKQSYLSWCPTSCAYTSSAPSAQPHDRQGVRKVLDVKFHPEGLPQLVSCSNEAPNELLLFNLLSGRATQLRGHNTKIQATAFAVKGASIVSCGSNLLKVWDCITGSCLYTLGGDDHNSVGHTQKINAMAVNKWQSCLVVTSGAKGDGKLLLWNALRGELASDLNSNLRSQDMVYPSIDTMEFCSENLLACGSDCEYGGSAVVQLWDIESPESYLSFSASDSYITSLKTNPAGNTIITGSGDGTIGLFDIRACSAINHLSVGPGCEVTSVSFSNCGTYFSASSTSNNTLVWDTRLVPLNQSRDVSRSKDMRFFRPLHCLSHGKQMPTAEYTSQLPGHVDEGDQGVNAMQWLHKEPVLVTVSGDGSVGMWDVTLGQPCVRHILTHNRCANAVAVAPNDEYISTGGSDQKVVLYHSKSGCAHLNWRLTYPLPGND
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr08 | 28013143 | 28013468 | - | OsNaBo_08g0022900.02 | OsNaBo_08g0022900.02,OsNaBo_08g0022900.01 | All |
| A5 | Chr08 | 28017538 | 28017738 | - | OsNaBo_08g0022900.02 | OsNaBo_08g0022900.02,OsNaBo_08g0022900.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.475440 | 5.950205 | 5.402292 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0531200 | RBH | 1.791227 | 1.114655 | 1.779408 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g41900 | RBH | 1.208791 | 0.741706 | 0.453171 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0531200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0023230 | RBH | 0.719288 | 3.713071 | 5.811631 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0023110 | RBH | 0.324965 | 0.000000 | 2.159256 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0023030 | RBH | 1.125789 | 8.183528 | 5.638734 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0023270 | RBH | 0.146688 | 0.043891 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0023020 | RBH | 5.046649 | 13.121182 | 19.249880 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0422100 | RBH | 3.553718 | 9.1529485 | 7.517033 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0022900 | RBH | 0.372357 | 0.368854 | 1.145716 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0022280 | RBH | 0.087434 | 0.074484 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0022600 | RBH | 0.793259 | 5.090329 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0022430 | RBH | 6.250729 | 4.007770 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0023240 | RBH | 0.740875 | 0.677884 | 1.501438 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0022580 | RBH | 0.114017 | 3.579854 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G022760 | RBH | 0.254663 | 2.128680 | 3.165082 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0018390 | RBH | 0.0 | 4.774212 | 3.850373 |
