Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_08g0009530 | OGI:08030730 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr08:11327480-11331451 | ||||||||
| Gene Symbol | PAP23, OsPAP23 | ||||||||||
| DNA seq | tttcggttctccttgtgcccaacaaacacactgctgactgctgatgtccttctgttgcattgcacacaccgaatcattgaggttcatcggtgctctttgcttgcaagcgacaaagccattccaacgaatatccacagaaatatccgccccaaatcatttcccgcaacagctaagccagccagctgttcgtcctagggtcatgcgcggcgccgcgtacgactaggggacgcgcgcgcctgccatggccgcgcccgcagccgccggcgacctccgcttcctccttgtggggttgttgttggtggtggtggtgggatcccgcctcgtacggccccccgatggcggcggcattccgacgacgctggacggcccgttcgagccggcgacgcgggcgttcgaccgcgcgctccggcaggggagcgacgacgtgccgctcaccgacccgcgcctcgcgccgcgcgcgcggccccccgcgcccgagcagatcgcgctcgccgcctcctccgacgccacctcggtctgggtgtcgtgggtcaccggcgaggcgcaggtgggatcccacctcaccccgctcgacccgtccaccgtccgcagcgaggtctggtacagcgagaggccctccccgacggccgccgccgccggcgacgtctccggccactacccgcacgtggcgagggggaaggcggaggtgtacagccagctctacccgtacccaggcctcctcaactacacctcgggcgccatccaccacgtccgcctccggggcctcaggccggccacgcgctactactaccgctgcggcgacagctccgtccgcggcggcgcggggctcagcggcgagctatccttcgagacgctcccctcctccgccgccgcggcgtaccctcgccgggtggcggtggtgggggacctggggctgaccggcaactcgacgtccaccgtcgaacacctcgcccgcaacgacccgtcgctggtggtcgtggtcggcgacatgacctacgccaaccagtaccgcaccaccggcggcagaggcgtcccctgcttctcctgctccttccccgacgcgccgctccgggaatcctaccaaccgcgatgggatggctggggaaggttaatagctagtacaagtgatgccgaattcaaattcagttccatttctttgtttgggatctgaatttcgaacaaagccatccaaaatgcatacaaactaacttataattctgacaggaatttttctttcagaggggaagtggctttcattacgttaaaaggggaaaatttgcaaaatactaccgcaaaaatacatgggtttgcataatagcagattcagatgatccaaattcttgtacattggaatgacatgttggtacttgaaccacttgtcaatgacacatacggtttctagctacgtaatattttgatcctattaacaaaattaccaaattAaaaaagaaatcctaaataaatggatttaaattgcttcgtttttcaagtcagacttttgtatattttttaaggaagtttgacttttgtagttagcatacacgcaattggaaatcaagaacttctgacaaatttcaaacaagaaagcgggtgaaattatccttggactctgcttatataaagtttaactgaaaacatttgtatggattcaggttcatggagccgctcacttcgaggatcccaatgatggtgatcgaagggaaccatgagatcgaaccacagggacaaggtggagcggtgacctttgcatcctacctggcaagattcgccgttccatccgaggagtctggctctaacaccaagttctactactcgttcaatgccgggggcatccatttcatcatgctcggtgcctacgtcgactacaaccggacaggtaatccatcagccactattcatcttgatggcactcaatatcaggaatgtatcattaagattttagaattgttcacattaagttgcatagtcatgtcaggccatttcattgttcatacattctcttgttgattgtggtgacattttcgtgcttattacattgtgcgtaggagcccagtactcgtggttagagaaggatctgcgaaagattgatcgacgagtcacaccttgggttgtggctgcttggcacccgccctggtataacagctattcctcgcactaccaggaatttgagtgcatgagacaagcaatggaagggctcttgtaccaacatggtgtcgacattgtcttttcagggcatgtaagcgcatacattttgcattttaggcttagttctttttagattagtgagcagattactgaaaacagattatttgttctactcttcaaaaaatgtattttctcgaaaaactttcttataccacttgcatattttaagttatttattaaatttatttataaaaataatttaatttataccctataaacaagtacatataatccccataacaatccgctcaataatctgttgcaatctgagccatggttccatctaataattaatttcaataagcgggtgtacatatgtagggtttgtctgtgctcttcctcgtctcggataattgattcaggccataaatttttacgaattcacatatgaatgatctaaaggtgcatgcttatgagaggatgaaccgggtgttcaactatactctcgacccctgtgggccggtctacattaccattggagatggagggaacattgagaagattgatatcgatcatgctgatgatcctggaaaatgtcccggtcctggtgacaaccaccctgaatttggtggagtctgccatctcaacttcacctctggtcctgccaaggggaaattttgctgggagaaacagccggagtggagcgcgttcagggagagcagtttcggacatggcatcctagaggttattcccagtttgtttatgatataatgaacactcaatcactctgtttttactactccttccgttttgaattatttttcgttttagttttatcctaaaccaatttcctaattttgatcatcgatgtatatagcttaattaagaacatatgcattatatattctgaaaatatttcttatggccaaatttagctgatatgatttatgttatatgttaattatatattgggaagtactccaacttcacagttgtcacgtgtacgagtgcaggtggttaattctacatatgcattatggacatggcaccgtaaccaggatgcatatggagaagacagcgtgggggatcaaatctatatagttcggcaaccggacaaatgcttgctccagactacgagtgcgtcgtctgaaaacaactggtgattttcatttgatgatgaaataaataatcatgaattttgttacaatttcttgttgaaatttatgcctctaatcaacgtccatgtaaaatattctcaatcactttgTttttttttttacgttttattgcacagtccctctgaaggatgcccttctctagtgagcaacagtggctacggtgcacagaaggatattattagaagtggccatctcatttggaatgcttctctagtcatatggatgatcttgatcagcacagttttcatgaagggaaatttgtgctctcgtttctagcctggattggtcaacaaacaagaggaaccaaagcaccagcgaaccaagatgttatactgtgtgctcttggatttgtgtggtggccaaagctggactctggttggttgtgtgcagtaaccatcattgcttttggtaatacatactcctacatctacatgagtttatgaaatagtcgtcggcttttatttactcaattgtcagtgctgaccatgtttccatgaacacactgatgcaacaaactcctttttctatctaaagtagaatggtccaaataaccaaatgccttgaaatgggtgtagtggtgtatttgtttttgttgtttgaaagaacagtgtagaggtttctattggagtatatactactgcaacaacta
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| CDS seq | atggccgcgcccgcagccgccggcgacctccgcttcctccttgtggggttgttgttggtggtggtggtgggatcccgcctcgtacggccccccgatggcggcggcattccgacgacgctggacggcccgttcgagccggcgacgcgggcgttcgaccgcgcgctccggcaggggagcgacgacgtgccgctcaccgacccgcgcctcgcgccgcgcgcgcggccccccgcgcccgagcagatcgcgctcgccgcctcctccgacgccacctcggtctgggtgtcgtgggtcaccggcgaggcgcaggtgggatcccacctcaccccgctcgacccgtccaccgtccgcagcgaggtctggtacagcgagaggccctccccgacggccgccgccgccggcgacgtctccggccactacccgcacgtggcgagggggaaggcggaggtgtacagccagctctacccgtacccaggcctcctcaactacacctcgggcgccatccaccacgtccgcctccggggcctcaggccggccacgcgctactactaccgctgcggcgacagctccgtccgcggcggcgcggggctcagcggcgagctatccttcgagacgctcccctcctccgccgccgcggcgtaccctcgccgggtggcggtggtgggggacctggggctgaccggcaactcgacgtccaccgtcgaacacctcgcccgcaacgacccgtcgctggtggtcgtggtcggcgacatgacctacgccaaccagtaccgcaccaccggcggcagaggcgtcccctgcttctcctgctccttccccgacgcgccgctccgggaatcctaccaaccgcgatgggatggctggggaaggttcatggagccgctcacttcgaggatcccaatgatggtgatcgaagggaaccatgagatcgaaccacagggacaaggtggagcggtgacctttgcatcctacctggcaagattcgccgttccatccgaggagtctggctctaacaccaagttctactactcgttcaatgccgggggcatccatttcatcatgctcggtgcctacgtcgactacaaccggacaggagcccagtactcgtggttagagaaggatctgcgaaagattgatcgacgagtcacaccttgggttgtggctgcttggcacccgccctggtataacagctattcctcgcactaccaggaatttgagtgcatgagacaagcaatggaagggctcttgtaccaacatggtgtcgacattgtcttttcagggcatgtgcatgcttatgagaggatgaaccgggtgttcaactatactctcgacccctgtgggccggtctacattaccattggagatggagggaacattgagaagattgatatcgatcatgctgatgatcctggaaaatgtcccggtcctggtgacaaccaccctgaatttggtggagtctgccatctcaacttcacctctggtcctgccaaggggaaattttgctgggagaaacagccggagtggagcgcgttcagggagagcagtttcggacatggcatcctagaggatgcatatggagaagacagcgtgggggatcaaatctatatagttcggcaaccggacaaatgcttgctccagactacgagtgcgtcgtctgaaaacaactgtccctctgaaggatgcccttctctagtgagcaacagtggctacggtgcacagaaggatattattagaagtggccatctcatttggaatgcttctctagtcatatggatgatcttgatcagcacagttttcatgaagggaaatttgtgctctcgtttctag
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| Protein seq | MAAPAAAGDLRFLLVGLLLVVVVGSRLVRPPDGGGIPTTLDGPFEPATRAFDRALRQGSDDVPLTDPRLAPRARPPAPEQIALAASSDATSVWVSWVTGEAQVGSHLTPLDPSTVRSEVWYSERPSPTAAAAGDVSGHYPHVARGKAEVYSQLYPYPGLLNYTSGAIHHVRLRGLRPATRYYYRCGDSSVRGGAGLSGELSFETLPSSAAAAYPRRVAVVGDLGLTGNSTSTVEHLARNDPSLVVVVGDMTYANQYRTTGGRGVPCFSCSFPDAPLRESYQPRWDGWGRFMEPLTSRIPMMVIEGNHEIEPQGQGGAVTFASYLARFAVPSEESGSNTKFYYSFNAGGIHFIMLGAYVDYNRTGAQYSWLEKDLRKIDRRVTPWVVAAWHPPWYNSYSSHYQEFECMRQAMEGLLYQHGVDIVFSGHVHAYERMNRVFNYTLDPCGPVYITIGDGGNIEKIDIDHADDPGKCPGPGDNHPEFGGVCHLNFTSGPAKGKFCWEKQPEWSAFRESSFGHGILEDAYGEDSVGDQIYIVRQPDKCLLQTTSASSENNCPSEGCPSLVSNSGYGAQKDIIRSGHLIWNASLVIWMILISTVFMKGNLCSRF |
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| Function | Purple acid phosphatase 23 [UniProtKB/Swiss-Prot:Q6TPH1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_08g0009530 | OsNaBo_08g0009530.01 | Chr08 | 11327480 | 11331078 | + | NAM | ||
| CDS seq | atggccgcgcccgcagccgccggcgacctccgcttcctccttgtggggttgttgttggtggtggtggtgggatcccgcctcgtacggccccccgatggcggcggcattccgacgacgctggacggcccgttcgagccggcgacgcgggcgttcgaccgcgcgctccggcaggggagcgacgacgtgccgctcaccgacccgcgcctcgcgccgcgcgcgcggccccccgcgcccgagcagatcgcgctcgccgcctcctccgacgccacctcggtctgggtgtcgtgggtcaccggcgaggcgcaggtgggatcccacctcaccccgctcgacccgtccaccgtccgcagcgaggtctggtacagcgagaggccctccccgacggccgccgccgccggcgacgtctccggccactacccgcacgtggcgagggggaaggcggaggtgtacagccagctctacccgtacccaggcctcctcaactacacctcgggcgccatccaccacgtccgcctccggggcctcaggccggccacgcgctactactaccgctgcggcgacagctccgtccgcggcggcgcggggctcagcggcgagctatccttcgagacgctcccctcctccgccgccgcggcgtaccctcgccgggtggcggtggtgggggacctggggctgaccggcaactcgacgtccaccgtcgaacacctcgcccgcaacgacccgtcgctggtggtcgtggtcggcgacatgacctacgccaaccagtaccgcaccaccggcggcagaggcgtcccctgcttctcctgctccttccccgacgcgccgctccgggaatcctaccaaccgcgatgggatggctggggaaggttcatggagccgctcacttcgaggatcccaatgatggtgatcgaagggaaccatgagatcgaaccacagggacaaggtggagcggtgacctttgcatcctacctggcaagattcgccgttccatccgaggagtctggctctaacaccaagttctactactcgttcaatgccgggggcatccatttcatcatgctcggtgcctacgtcgactacaaccggacaggagcccagtactcgtggttagagaaggatctgcgaaagattgatcgacgagtcacaccttgggttgtggctgcttggcacccgccctggtataacagctattcctcgcactaccaggaatttgagtgcatgagacaagcaatggaagggctcttgtaccaacatggtgtcgacattgtcttttcagggcatgtgcatgcttatgagaggatgaaccgggtgttcaactatactctcgacccctgtgggccggtctacattaccattggagatggagggaacattgagaagattgatatcgatcatgctgatgatcctggaaaatgtcccggtcctggtgacaaccaccctgaatttggtggagtctgccatctcaacttcacctctggtcctgccaaggggaaattttgctgggagaaacagccggagtggagcgcgttcagggagagcagtttcggacatggcatcctagaggatgcatatggagaagacagcgtgggggatcaaatctatatagttcggcaaccggacaaatgcttgctccagactacgagatgcccttctctagtgagcaacagtggctacggtgcacagaaggatattattagaagtggccatctcatttggaatgcttctctagtcatatggatgatcttgatcagcacagttttcatgaagggaaatttgtgctctcgtttctag
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| Protein seq | MAAPAAAGDLRFLLVGLLLVVVVGSRLVRPPDGGGIPTTLDGPFEPATRAFDRALRQGSDDVPLTDPRLAPRARPPAPEQIALAASSDATSVWVSWVTGEAQVGSHLTPLDPSTVRSEVWYSERPSPTAAAAGDVSGHYPHVARGKAEVYSQLYPYPGLLNYTSGAIHHVRLRGLRPATRYYYRCGDSSVRGGAGLSGELSFETLPSSAAAAYPRRVAVVGDLGLTGNSTSTVEHLARNDPSLVVVVGDMTYANQYRTTGGRGVPCFSCSFPDAPLRESYQPRWDGWGRFMEPLTSRIPMMVIEGNHEIEPQGQGGAVTFASYLARFAVPSEESGSNTKFYYSFNAGGIHFIMLGAYVDYNRTGAQYSWLEKDLRKIDRRVTPWVVAAWHPPWYNSYSSHYQEFECMRQAMEGLLYQHGVDIVFSGHVHAYERMNRVFNYTLDPCGPVYITIGDGGNIEKIDIDHADDPGKCPGPGDNHPEFGGVCHLNFTSGPAKGKFCWEKQPEWSAFRESSFGHGILEDAYGEDSVGDQIYIVRQPDKCLLQTTRCPSLVSNSGYGAQKDIIRSGHLIWNASLVIWMILISTVFMKGNLCSRF
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_08g0009530 | OsNaBo_08g0009530.02 | Chr08 | 11327652 | 11331451 | + | NAM | ||
| CDS seq | atggccgcgcccgcagccgccggcgacctccgcttcctccttgtggggttgttgttggtggtggtggtgggatcccgcctcgtacggccccccgatggcggcggcattccgacgacgctggacggcccgttcgagccggcgacgcgggcgttcgaccgcgcgctccggcaggggagcgacgacgtgccgctcaccgacccgcgcctcgcgccgcgcgcgcggccccccgcgcccgagcagatcgcgctcgccgcctcctccgacgccacctcggtctgggtgtcgtgggtcaccggcgaggcgcaggtgggatcccacctcaccccgctcgacccgtccaccgtccgcagcgaggtctggtacagcgagaggccctccccgacggccgccgccgccggcgacgtctccggccactacccgcacgtggcgagggggaaggcggaggtgtacagccagctctacccgtacccaggcctcctcaactacacctcgggcgccatccaccacgtccgcctccggggcctcaggccggccacgcgctactactaccgctgcggcgacagctccgtccgcggcggcgcggggctcagcggcgagctatccttcgagacgctcccctcctccgccgccgcggcgtaccctcgccgggtggcggtggtgggggacctggggctgaccggcaactcgacgtccaccgtcgaacacctcgcccgcaacgacccgtcgctggtggtcgtggtcggcgacatgacctacgccaaccagtaccgcaccaccggcggcagaggcgtcccctgcttctcctgctccttccccgacgcgccgctccgggaatcctaccaaccgcgatgggatggctggggaaggttcatggagccgctcacttcgaggatcccaatgatggtgatcgaagggaaccatgagatcgaaccacagggacaaggtggagcggtgacctttgcatcctacctggcaagattcgccgttccatccgaggagtctggctctaacaccaagttctactactcgttcaatgccgggggcatccatttcatcatgctcggtgcctacgtcgactacaaccggacaggagcccagtactcgtggttagagaaggatctgcgaaagattgatcgacgagtcacaccttgggttgtggctgcttggcacccgccctggtataacagctattcctcgcactaccaggaatttgagtgcatgagacaagcaatggaagggctcttgtaccaacatggtgtcgacattgtcttttcagggcatgtgcatgcttatgagaggatgaaccgggtgttcaactatactctcgacccctgtgggccggtctacattaccattggagatggagggaacattgagaagattgatatcgatcatgctgatgatcctggaaaatgtcccggtcctggtgacaaccaccctgaatttggtggagtctgccatctcaacttcacctctggtcctgccaaggggaaattttgctgggagaaacagccggagtggagcgcgttcagggagagcagtttcggacatggcatcctagaggatgcatatggagaagacagcgtgggggatcaaatctatatagttcggcaaccggacaaatgcttgctccagactacgagtgcgtcgtctgaaaacaactgtccctctgaaggatgcccttctctagtgagcaacagtggctacggtgcacagaaggatattattagaagtggccatctcatttggaatgcttctctagtcatatggatgatcttgatcagcacagttttcatgaagggaaatttgtgctctcgtttctag
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| Protein seq | MAAPAAAGDLRFLLVGLLLVVVVGSRLVRPPDGGGIPTTLDGPFEPATRAFDRALRQGSDDVPLTDPRLAPRARPPAPEQIALAASSDATSVWVSWVTGEAQVGSHLTPLDPSTVRSEVWYSERPSPTAAAAGDVSGHYPHVARGKAEVYSQLYPYPGLLNYTSGAIHHVRLRGLRPATRYYYRCGDSSVRGGAGLSGELSFETLPSSAAAAYPRRVAVVGDLGLTGNSTSTVEHLARNDPSLVVVVGDMTYANQYRTTGGRGVPCFSCSFPDAPLRESYQPRWDGWGRFMEPLTSRIPMMVIEGNHEIEPQGQGGAVTFASYLARFAVPSEESGSNTKFYYSFNAGGIHFIMLGAYVDYNRTGAQYSWLEKDLRKIDRRVTPWVVAAWHPPWYNSYSSHYQEFECMRQAMEGLLYQHGVDIVFSGHVHAYERMNRVFNYTLDPCGPVYITIGDGGNIEKIDIDHADDPGKCPGPGDNHPEFGGVCHLNFTSGPAKGKFCWEKQPEWSAFRESSFGHGILEDAYGEDSVGDQIYIVRQPDKCLLQTTSASSENNCPSEGCPSLVSNSGYGAQKDIIRSGHLIWNASLVIWMILISTVFMKGNLCSRF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 1.515795 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0280100 | RBH | 0.245292 | 0.000000 | 0.768822 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g17784 | RBH | 0.154717 | 0.000000 | 0.181483 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0280100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0009680 | RBH | 0.086441 | 2.446744 | 4.133403 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0009820 | RBH | 0.0 | 0.0 | 2.178473 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0009860 | RBH | 0.0 | 1.361086 | 4.544981 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0009740 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0009680 | RBH | 0.446212 | 1.265800 | 1.298510 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0167900 | RBH | 2.193106 | 0.339239 | 5.3897705 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0009720 | RBH | 0.000000 | 0.034974 | 0.073414 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0169700 | RBH | 2.708891 | 0.330967 | 22.065195 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0009250 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0009450 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0009290 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0010100 | RBH | 0.337616 | 0.174730 | 0.084388 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0009400 | RBH | 0.096855 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G009580 | RBH | 0.000000 | 0.978108 | 2.468958 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
