Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_07g0027290 | OGI:07078600 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr07:28097360-28098620 | ||||||||
| Gene Symbol | OsOFP16, OsOFP24 | ||||||||||
| DNA seq | gaatttctacatttcttattttgctctggagagcagtctgaactctgaactctctgtatcatgcaccaacatatctttttcgttccaacaatttacaagcgtattgattatgattcagaagcacaaatataagagagaatttatatagtatgtcagattcttgcaagatgccgctgccgcttttccaccgcaacatctctttgctgccactcgcggcaaacttttccgtaataaaaagtggggtgcaacctcgctgcacgcactgcagctcagctcacccccacagtccacgaccacactgcctcactgcagcagcagcagctacgatgccattgccgagctcgtggctgttccacaagctgcggcggaggagaagcgcggcgagaggagaacccgacgtcgtcgaagcggcgagcaagaagcagcaacctcccatggcggcggcggcggcagcggcgccgtgctcgccgtcgccgaacagggcgtcgtactacttcgcgagcagagaacgctgtctccctccggctcgcgccgccacggacaaccacaagctccgggacacccggttcccgcggagcccgcagccgaacgacgacatcgtgttcgacgtcgtcgccgtctcggcgtcgccggcgcgcggccggttcgacgggatgaaggcgatgccggagctcaagctgcggcccatcctcaccaagcgcgccaccgccaagaacgacggcgacgaaggtgacgcgctggacagcggcacgagcgcggccgcgtcgccgacgacaagggtgcggcggttcgtccaccacgcgaagccgagcagcgggaggcggaaggggcgggtggcggcgctgccggccgacgctaccagccggaggcggcggcggcggcggcggtgccggtggctgtacgagagcctggtggtggtgaaggagtcggccgacccggaggaggacttcctggagagcatggcggagatgatcgccgcgaacgacgtgcgctcgccgcgggacctcgaggagcttcttgcttgctacctcgccctcaacgccgccgagcaccaccgcgccatcgtcggcgcgttccgccgcgcgtggctgcacgccgccgccgccacggcggcgccgccatcacctagcccgatcaagtgatcgagattattactacgtacgtaccagcaaaacgcaagattaattgctacgtgccctgtacagagtgaccatgcatgtgatgatcgaattcggtatgattaagatgatagtcattgcac
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| CDS seq | atgtcagattcttgcaagatgccgctgccgcttttccaccgcaacatctctttgctgccactcgcggcaaacttttccgtaataaaaagtggggtgcaacctcgctgcacgcactgcagctcagctcacccccacagtccacgaccacactgcctcactgcagcagcagcagctacgatgccattgccgagctcgtggctgttccacaagctgcggcggaggagaagcgcggcgagaggagaacccgacgtcgtcgaagcggcgagcaagaagcagcaacctcccatggcggcggcggcggcagcggcgccgtgctcgccgtcgccgaacagggcgtcgtactacttcgcgagcagagaacgctgtctccctccggctcgcgccgccacggacaaccacaagctccgggacacccggttcccgcggagcccgcagccgaacgacgacatcgtgttcgacgtcgtcgccgtctcggcgtcgccggcgcgcggccggttcgacgggatgaaggcgatgccggagctcaagctgcggcccatcctcaccaagcgcgccaccgccaagaacgacggcgacgaaggtgacgcgctggacagcggcacgagcgcggccgcgtcgccgacgacaagggtgcggcggttcgtccaccacgcgaagccgagcagcgggaggcggaaggggcgggtggcggcgctgccggccgacgctaccagccggaggcggcggcggcggcggcggtgccggtggctgtacgagagcctggtggtggtgaaggagtcggccgacccggaggaggacttcctggagagcatggcggagatgatcgccgcgaacgacgtgcgctcgccgcgggacctcgaggagcttcttgcttgctacctcgccctcaacgccgccgagcaccaccgcgccatcgtcggcgcgttccgccgcgcgtggctgcacgccgccgccgccacggcggcgccgccatcacctagcccgatcaagtga
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| Protein seq | MSDSCKMPLPLFHRNISLLPLAANFSVIKSGVQPRCTHCSSAHPHSPRPHCLTAAAAATMPLPSSWLFHKLRRRRSAARGEPDVVEAASKKQQPPMAAAAAAAPCSPSPNRASYYFASRERCLPPARAATDNHKLRDTRFPRSPQPNDDIVFDVVAVSASPARGRFDGMKAMPELKLRPILTKRATAKNDGDEGDALDSGTSAAASPTTRVRRFVHHAKPSSGRRKGRVAALPADATSRRRRRRRRCRWLYESLVVVKESADPEEDFLESMAEMIAANDVRSPRDLEELLACYLALNAAEHHRAIVGAFRRAWLHAAAATAAPPSPSPIK |
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| Function | Transcription repressor OFP4 [UniProtKB/Swiss-Prot:F4HNU8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_07g0027290 | OsNaBo_07g0027290.01 | Chr07 | 28097360 | 28098620 | + | NAM | ||
| CDS seq | atgtcagattcttgcaagatgccgctgccgcttttccaccgcaacatctctttgctgccactcgcggcaaacttttccgtaataaaaagtggggtgcaacctcgctgcacgcactgcagctcagctcacccccacagtccacgaccacactgcctcactgcagcagcagcagctacgatgccattgccgagctcgtggctgttccacaagctgcggcggaggagaagcgcggcgagaggagaacccgacgtcgtcgaagcggcgagcaagaagcagcaacctcccatggcggcggcggcggcagcggcgccgtgctcgccgtcgccgaacagggcgtcgtactacttcgcgagcagagaacgctgtctccctccggctcgcgccgccacggacaaccacaagctccgggacacccggttcccgcggagcccgcagccgaacgacgacatcgtgttcgacgtcgtcgccgtctcggcgtcgccggcgcgcggccggttcgacgggatgaaggcgatgccggagctcaagctgcggcccatcctcaccaagcgcgccaccgccaagaacgacggcgacgaaggtgacgcgctggacagcggcacgagcgcggccgcgtcgccgacgacaagggtgcggcggttcgtccaccacgcgaagccgagcagcgggaggcggaaggggcgggtggcggcgctgccggccgacgctaccagccggaggcggcggcggcggcggcggtgccggtggctgtacgagagcctggtggtggtgaaggagtcggccgacccggaggaggacttcctggagagcatggcggagatgatcgccgcgaacgacgtgcgctcgccgcgggacctcgaggagcttcttgcttgctacctcgccctcaacgccgccgagcaccaccgcgccatcgtcggcgcgttccgccgcgcgtggctgcacgccgccgccgccacggcggcgccgccatcacctagcccgatcaagtga
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| Protein seq | MSDSCKMPLPLFHRNISLLPLAANFSVIKSGVQPRCTHCSSAHPHSPRPHCLTAAAAATMPLPSSWLFHKLRRRRSAARGEPDVVEAASKKQQPPMAAAAAAAPCSPSPNRASYYFASRERCLPPARAATDNHKLRDTRFPRSPQPNDDIVFDVVAVSASPARGRFDGMKAMPELKLRPILTKRATAKNDGDEGDALDSGTSAAASPTTRVRRFVHHAKPSSGRRKGRVAALPADATSRRRRRRRRCRWLYESLVVVKESADPEEDFLESMAEMIAANDVRSPRDLEELLACYLALNAAEHHRAIVGAFRRAWLHAAAATAAPPSPSPIK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.467872 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0679200 | RBH | 0.0 | 0.0 | 2.483565 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g48150 | RBH | 0.0 | 0.0 | 0.638203 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0679200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0027770 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0027800 | RBH | 0.0 | 0.0 | 0.758182 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0027590 | RBH | 0.0 | 0.0 | 0.785849 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0027380 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0027680 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0468600 | RBH | 0.1534 | 0.6746155 | 0.4547945 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0028140 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0482700 | RBH | 0.162803 | 0.1811825 | 3.2821205 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0027410 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0027870 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0027590 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0027920 | RBH | 0.0 | 0.0 | 0.182561 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0027480 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G027540 | RBH | 0.0 | 1.410671 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0016490 | RBH | 0.0 | 0.0 | 0.0 |
