Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_07g0018650 | OGI:07061360 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr07:21396981-21403455 | ||||||||
| Gene Symbol | SDRLK-6 | ||||||||||
| DNA seq | ggcaaccacaatcatctacacatgcttcatttcacaaaacttacatgccattttatatatgacataaatgttattttacaaattagcatgagtgaaggcccctgaatcctaatctacacaagacaatacctttgtaatagcagagaaaaggggaaaaaaagaacaaccaagctgttaatgattttcacaatgttgtccctgctaagctatcttccatgcaattgtgtcattgacacagtaccgatggagtggctctgatccttctcacttgatttgctcgtctcagccgaacgaccatggagcatcagggtaggcggtcttggcatgggaaggctggagctgtcgctgctcaacatcagtatgaccgcagggatatcaggacgttcttgcgcatgatcttgaacacatagcaatgcaatgtggatgcatctcaagacttgtcgaagtgagcacgatgctcttatcaatggatcaatcagttcctcgcccttgtcttcattccattgtcgccatgcctgaaaaattgttgtaaaatcaagccatgaagattaaaaaaaacaaaatattaggataagttcggtatataagggagacaggcttgtgcttacaaatcctgcaatgtttagggagtcttgttgaccatgaaagctcaaagccctctttcctgtgatgatctccaacattagaactccaaagctataaatatcggactttactgagaaaatgccttccatagcatattccggtgacatatagccactgcaaaaaggaaatcaacttatcataacagtggcaatgttagagatattctgaggtatattctgaattacgcatacaatgttccaaccacacgattcgtgttgaattggttttgatcccctccaaacatcctggccattccaaaatctgaaatcttggggttcatgtctttgtccaggagaatgttgctggccttgagatcacgatgaacaactcgcaaccttgagtcccggtggagatataacagccctcgagcaatcccttcaattatatcaaaccgtttcctccagtctaggagcccttgcttctcaggatctattcatccacagtaaacacaattcaatcaattcatctgctcattcataaagggaatggtgatgtgcagaaatggtacatactgaagaggaatgcatctagacttttgttaggcatgtactcgtacaccaagatcttctcttctccctgtatgcagcatcctaatagtctcacaagattgcgatgctgcagttttgcgataagtatgacctcattcttgaactcctcaaggccttgacctgatttcctacaaagcctcttaacggctacttcttctCccccaggtaattttccctacagtcatttcattgacatgataaacctgatctcaatattacataaaaaatatactctcatctatgatataaaaacataccatatatttcatcaaaaaataaaacgtaccatatatacaggaccaaatcctcctgctccaagcttgttggagtcactgaaattacaagtggcagcttttatccggtcaaaggagtatactttgagttcatgactttttccatcctctgtgtcgtcttcaaaaggaatcgactgcgagatgtccagcataccactattctgctgagatcgtgtagacgtatgcattgacctccaacTtttgtgcatcacatctgctccataaaatggcagttataagttaatattatgcatacctccatgaattcatgttgaaagatgaatagcaaatttaacggtttgtgcaaatctcttggcaagcatgacagaccatgaatctaactgggatacttaaccataataccaactactaagaaataatcatcacttcaaaaatacatgatcactatacaaaagatttttgtatgagaactcatagaagtgaacatttactatgtttcaatcagtgaatcaacactctgtggagtaaaaatgcatgatctatgttaccatgacattagaatactttcaaatgctgacaatgacaatatcttcccggagtcgcattacacaagacatggtcttgtcatgattagttacacgttgaacaagacagctctacattcagccctacccactatcttctcttagaacattaaatcgtccagttttgttggtctaatcttaTttttaaggcttgtgggggaacattcctgagcatgatgacatatttacttacagtattactagcatcgcatggtcagctaaatttggatgtgtgcaacagaaccttacctttgatattcctcccacgcttccaccacaggaagaggcaagctagcaaaacaaatagcaccactgcagacactattgtggctattttccaaactgcatgatgtgagcctgataatagagtgaagctgaagtcatcataaaCATcatatttttcatgcgaggagatatggaagtgcatatgtacactgttgtgtacttgtattagataatcatcatcacttacgtaactcagaagcaggaagtttgaggtttagggtatatcccccactctgaaactggtacatatcgatcaggtcgctaCcccacagtagacatcctattgtagtcatgtagacataggcaccacatgagcagttgctgaggcaagcattcatgcatccattctcatcttgcaccgtagatggccagtatgagaaatccggccacttgatgtttgggatagaaagaaatccatccccagtttggttcacctgacaacccaaaggtgggctcctgacacaaccttgactccaatttcccatattccactgatcaagcaactttggctgaaatcctatagaagtcagcaaaaaaatttaaacccactgttgcagccagtatttgtttgtaagcatgtaaaaatgatagtgaaggtatcaaagcaaccagagatagcacaccacatatttgtattttagggtgctaatgtattttactgtgggtgaacggaaaaggaagaacacccattcagttaagacaacaatttttgactgggttgataaaatcccttaaagtaagcactcaactttaacattttcaaaagtttacatacaacgactgaaggtcagttttcttttcctttggtagtgttatggccaccatgattggaagaatctatgtccacgccgcaactatagcatgtggaactgtgaagttatataagaaactttcagataaaggagcaggaagaactaatgttttgactttggaatgaattaatagttaagtaactgacataatttccacaagattaatatgaattcctggactcaaaaaagggccttaatctctatgaccatcagtataaacacaaacctaatttgatgtcagttacacttctctcactactacaaaaggaattcaatttctaaactaatggtcaaggagataccttttaggcaggtacattttgccttgccatcttgcatggcagtgcatttagcatttgcgccacacgtagcatagtactcacactcatttgatggttgcatccagacagtctcccactcttgtgctgccttcttaaccatgtaacagatgtctgtaccatttggcataacaacaaacctttgcagagatgtgtttgatgcagtgtaagtgtagtatgcacctaagtttgcatcatttgctggcttgaacccatacaagtacagtggtctccaaggaatgcccacaaaattctgcccagtccattgtcctgacctgtaaagagtcaattaaagttatggcatatcttaaattgagaatccattttttctgatattatatattaaatcagttaagttgtcattaattatttcaataacacaattcaaatcccatttcatcttgaatactagcttttgcacacttgcattacatatttcataggtattgacttgttttctgtggatccatcaggctgatgttcagcttgcaggaactgagaattcatcgaagcatgccatgcaataccgaaaaggaaaattttcttatatgacacacttgaatctgccacctgagtttatttattatagtagtattttgtcaccagaaacatattgtactgatgttttacgccactttcagaggttaacacttaacagttggggggggggggtaatatactcttgttacatgctactttcactgtccaaaatacagcacatgactccaggtttctattgcttgagcttatctccatttggacagtggaaatggtaaagaacaaggatatatggtcttttccttctccataccaaaagttagtgttcatatgtttccattggcagataagacaatacacaaagtaagaagctgaacctacatttcacaaactcaagagtgccatagaggatttttttttctttttgttagtgactggatttattggattacttcatggagaaagagagaaaaaatacaaatctgtttgttgaaagagttttctcaaacggtctgctcacatgtattccctctgttctttttagatatcaacaaaccaaggagctaagcaatgcccatgttttgacatgttcgccctcttaaatgttctaagctgcaatcaatagcctccacctatcttgctcattcaattccaattttcagcttacaatgactattactaggacctatttgggtaaacgctaactagaagaccgatacaatttgataacaaaaataactttctaaaacagcataaaaaaaagggagcaattactactccctccagtaaaaaataaatgatgtttaggcatgttgtttctagcttcctttaaatttggacctcaatatgttttgtggaaatttaaaccaaacatatgaaagtgataagcatagatttgactgaaaaagatatttaaaaccgcacctgacaggtcgcgatgcaacagaaatcattcatcagagctatgtttggaggtcatgtcaattacaaaacttatttgcgaccgggctaaatgtcttatttgtaacttaacaccatactcataaaacttaagtgcagaaaacattcagtgtgtcaaaaaacagaggttaaatctgttagaatagcctaccaatatacatgaactagtgagtaatgattattgatggattgcaagtaggaggtaacgttccccacatggctattttgcccattccaattgctaaacttaatgtttctgatagcccctcaccaaccattccacatcacaatgaaaacgatgtttacatcacccatgaaaaggagatgctcaaaactagtgatccaaactccaaagtataatagaggatgagcaaccaaagccaaaccaaactaggctacctaccaagcaacattaattgaagctgagcaatattttcaaaaattaaatatagatcttggattgccccgtgaataacaaggaagatgcttagatttgtgtaaaactgtactcgaacttaagaaattcctatgaccaacactccaacagcaaccacttgaagttgaagtatacattaataaccccaaattttattctaagcataattgcgggtcagatttgatttgaactattcattattctaggccctacagtcttaagatattagtatcaatcaaatccgaatcaaatgatactagcaaccagagcgaatcgagaaactgacctccaaatggtgacattgccatctctccagatgtaggcctggccggagttggccgggtcgaggccgagcgcgtaccgccccggcgaggggtccgtctcgctggtccacgacgtgaagcgcatcggttcggaggggcccctcccgggcgtgcgcacggtgatgcgcatcccggacagcatggtgtccgacgggtgccagaagctgtcccacagcgtgccgtcgtcgctgcgcacctcgaggctgccggtgtcctggatgacggccttgtacccgccgcgtggcgcggactgcgtggacgcgttcgacctccacaagagcggcgcgtccgcgtccgcggcggagccgtcgagcacgtggagctcgccgttggccgcgagcgtgagcgacggcgacggcgcggtggccggcgcggcgcggttggcgacccagacgacggtcctcggcgagatgctgcggtaccagatgccgaggtagagccgcgacggcagcttcgggtccggcgcgaagaaccccacctcgaacacccccgacggcgacgacaccagcgtcgccgcccccgtcagcgactccccctgcctcaacgtatccgtcgccgccgccgccgcaaccaccacgccccaaacgagcagcaacgggagaagcagcagcaggggacgaggaggaggaggaggagaagccgccatggatggaggcggcggcagcagccgcagcagccagcctccctcctccgccaacaaccacctcactgctgtgatgtggtgtcgagaggagagagagagtttaatggcggaggattgtgtcgcggatttgtttagtggcggcgctgtgt
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| CDS seq | atggcggcttctcctcctcctcctcctcgtcccctgctgctgcttctcccgttgctgctcgtttggggcgtggtggttgcggcggcggcggcgacggatacgttgaggcagggggagtcgctgacgggggcggcgacgctggtgtcgtcgccgtcgggggtgttcgaggtggggttcttcgcgccggacccgaagctgccgtcgcggctctacctcggcatctggtaccgcagcatctcgccgaggaccgtcgtctgggtcgccaaccgcgccgcgccggccaccgcgccgtcgccgtcgctcacgctcgcggccaacggcgagctccacgtgctcgacggctccgccgcggacgcggacgcgccgctcttgtggaggtcgaacgcgtccacgcagtccgcgccacgcggcgggtacaaggccgtcatccaggacaccggcagcctcgaggtgcgcagcgacgacggcacgctgtgggacagcttctggcacccgtcggacaccatgctgtccgggatgcgcatcaccgtgcgcacgcccgggaggggcccctccgaaccgatgcgcttcacgtcgtggaccagcgagacggacccctcgccggggcggtacgcgctcggcctcgacccggccaactccggccaggcctacatctggagagatggcaatgtcaccatttggaggtcaggacaatggactgggcagaattttgtgggcattccttggagaccactgtacttgtatgggttcaagccagcaaatgatgcaaacttaggtgcatactacacttacactgcatcaaacacatctctgcaaaggtttgttgttatgccaaatggtacagacatctgttacatggttaagaaggcagcacaagagtgggagactgtctggatgcaaccatcaaatgagtgtgagtactatgctacgtgtggcgcaaatgctaaatgcactgccatgcaagatggcaaggcaaaatgtacctgcctaaaaggatttcagccaaagttgcttgatcagtggaatatgggaaattggagtcaaggttgtgtcaggagcccacctttgggttgtcaggtgaaccaaactggggatggatttctttctatcccaaacatcaagtggccggatttctcatactggccatctacggtgcaagatgagaatggatgcatgaatgcttgcctcagcaactgctcatgtggtgcctatgtctacatgactacaataggatgtctactgtgggGtagcgacctgatcgatatgtaccagtttcagagtgggggatataccctaaacctcaaacttcctgcttctgagttacgctcacatcatgcagtttggaaaatagccacaatagtgtctgcagtggtgctatttgttttgctagcttgcctcttcctgtggtggaagcgtgggaggaatatcaaagatgtgatgcacaaaAgttggaggtcaatgcatacgtctacacgatctcagcagaatagtggtatgctggacatctcgcagtcgattccttttgaagacgacacagaggatggaaaaagtcatgaactcaaagtatactcctttgaccggataaaagctgccacttgtaatttcagtgactccaacaagcttggagcaggaggatttggtcctgtatatatgggaaaattacctggggGagaagaagtagccgttaagaggctttgtaggaaatcaggtcaaggccttgaggagttcaagaatgaggtcatacttatcgcaaaactgcagcatcgcaatcttgcatggcgacaatggaatgaagacaagggcgaggaactgattgatccattgataagagcatcgtgctcacttcgacaagtcttgagatgcatccacattgcattgctatgtgttcaagatcatgcgcaagaacgtcctgatatccctgcggtcatactgatgttgagcagcgacagctccagccttcccatgccaagaccgcctaccctgatgctccatggtcgttcggctgagacgagcaaatcaagtgagaaggatcagagccactccatcggtactgtgtcaatgacacaattgcatggaagatag
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| Protein seq | MAASPPPPPRPLLLLLPLLLVWGVVVAAAAATDTLRQGESLTGAATLVSSPSGVFEVGFFAPDPKLPSRLYLGIWYRSISPRTVVWVANRAAPATAPSPSLTLAANGELHVLDGSAADADAPLLWRSNASTQSAPRGGYKAVIQDTGSLEVRSDDGTLWDSFWHPSDTMLSGMRITVRTPGRGPSEPMRFTSWTSETDPSPGRYALGLDPANSGQAYIWRDGNVTIWRSGQWTGQNFVGIPWRPLYLYGFKPANDANLGAYYTYTASNTSLQRFVVMPNGTDICYMVKKAAQEWETVWMQPSNECEYYATCGANAKCTAMQDGKAKCTCLKGFQPKLLDQWNMGNWSQGCVRSPPLGCQVNQTGDGFLSIPNIKWPDFSYWPSTVQDENGCMNACLSNCSCGAYVYMTTIGCLLWGSDLIDMYQFQSGGYTLNLKLPASELRSHHAVWKIATIVSAVVLFVLLACLFLWWKRGRNIKDVMHKSWRSMHTSTRSQQNSGMLDISQSIPFEDDTEDGKSHELKVYSFDRIKAATCNFSDSNKLGAGGFGPVYMGKLPGGEEVAVKRLCRKSGQGLEEFKNEVILIAKLQHRNLAWRQWNEDKGEELIDPLIRASCSLRQVLRCIHIALLCVQDHAQERPDIPAVILMLSSDSSSLPMPRPPTLMLHGRSAETSKSSEKDQSHSIGTVSMTQLHGR |
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| Function | G-type lectin S-receptor-like serine/threonine-protein kinase B120 [UniProtKB/Swiss-Prot:O81906] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_07g0018650 | OsNaBo_07g0018650.01 | Chr07 | 21397187 | 21403451 | - | NAM | ||
| CDS seq | atggcggcttctcctcctcctcctcctcgtcccctgctgctgcttctcccgttgctgctcgtttggggcgtggtggttgcggcggcggcggcgacggatacgttgaggcagggggagtcgctgacgggggcggcgacgctggtgtcgtcgccgtcgggggtgttcgaggtggggttcttcgcgccggacccgaagctgccgtcgcggctctacctcggcatctggtaccgcagcatctcgccgaggaccgtcgtctgggtcgccaaccgcgccgcgccggccaccgcgccgtcgccgtcgctcacgctcgcggccaacggcgagctccacgtgctcgacggctccgccgcggacgcggacgcgccgctcttgtggaggtcgaacgcgtccacgcagtccgcgccacgcggcgggtacaaggccgtcatccaggacaccggcagcctcgaggtgcgcagcgacgacggcacgctgtgggacagcttctggcacccgtcggacaccatgctgtccgggatgcgcatcaccgtgcgcacgcccgggaggggcccctccgaaccgatgcgcttcacgtcgtggaccagcgagacggacccctcgccggggcggtacgcgctcggcctcgacccggccaactccggccaggcctacatctggagagatggcaatgtcaccatttggaggtcaggacaatggactgggcagaattttgtgggcattccttggagaccactgtacttgtatgggttcaagccagcaaatgatgcaaacttaggtgcatactacacttacactgcatcaaacacatctctgcaaaggtttgttgttatgccaaatggtacagacatctgttacatggttaagaaggcagcacaagagtgggagactgtctggatgcaaccatcaaatgagtgtgagtactatgctacgtgtggcgcaaatgctaaatgcactgccatgcaagatggcaaggcaaaatgtacctgcctaaaaggatttcagccaaagttgcttgatcagtggaatatgggaaattggagtcaaggttgtgtcaggagcccacctttgggttgtcaggtgaaccaaactggggatggatttctttctatcccaaacatcaagtggccggatttctcatactggccatctacggtgcaagatgagaatggatgcatgaatgcttgcctcagcaactgctcatgtggtgcctatgtctacatgactacaataggatgtctactgtgggGtagcgacctgatcgatatgtaccagtttcagagtgggggatataccctaaacctcaaacttcctgcttctgagttacgctcacatcatgcagtttggaaaatagccacaatagtgtctgcagtggtgctatttgttttgctagcttgcctcttcctgtggtggaagcgtgggaggaatatcaaagatgtgatgcacaaaAgttggaggtcaatgcatacgtctacacgatctcagcagaatagtggtatgctggacatctcgcagtcgattccttttgaagacgacacagaggatggaaaaagtcatgaactcaaagtatactcctttgaccggataaaagctgccacttgtaatttcagtgactccaacaagcttggagcaggaggatttggtcctgtatatatgggaaaattacctggggGagaagaagtagccgttaagaggctttgtaggaaatcaggtcaaggccttgaggagttcaagaatgaggtcatacttatcgcaaaactgcagcatcgcaatcttgcatggcgacaatggaatgaagacaagggcgaggaactgattgatccattgataagagcatcgtgctcacttcgacaagtcttgagatgcatccacattgcattgctatgtgttcaagatcatgcgcaagaacgtcctgatatccctgcggtcatactgatgttgagcagcgacagctccagccttcccatgccaagaccgcctaccctgatgctccatggtcgttcggctgagacgagcaaatcaagtgagaaggatcagagccactccatcggtactgtgtcaatgacacaattgcatggaagatag
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| Protein seq | MAASPPPPPRPLLLLLPLLLVWGVVVAAAAATDTLRQGESLTGAATLVSSPSGVFEVGFFAPDPKLPSRLYLGIWYRSISPRTVVWVANRAAPATAPSPSLTLAANGELHVLDGSAADADAPLLWRSNASTQSAPRGGYKAVIQDTGSLEVRSDDGTLWDSFWHPSDTMLSGMRITVRTPGRGPSEPMRFTSWTSETDPSPGRYALGLDPANSGQAYIWRDGNVTIWRSGQWTGQNFVGIPWRPLYLYGFKPANDANLGAYYTYTASNTSLQRFVVMPNGTDICYMVKKAAQEWETVWMQPSNECEYYATCGANAKCTAMQDGKAKCTCLKGFQPKLLDQWNMGNWSQGCVRSPPLGCQVNQTGDGFLSIPNIKWPDFSYWPSTVQDENGCMNACLSNCSCGAYVYMTTIGCLLWGSDLIDMYQFQSGGYTLNLKLPASELRSHHAVWKIATIVSAVVLFVLLACLFLWWKRGRNIKDVMHKSWRSMHTSTRSQQNSGMLDISQSIPFEDDTEDGKSHELKVYSFDRIKAATCNFSDSNKLGAGGFGPVYMGKLPGGEEVAVKRLCRKSGQGLEEFKNEVILIAKLQHRNLAWRQWNEDKGEELIDPLIRASCSLRQVLRCIHIALLCVQDHAQERPDIPAVILMLSSDSSSLPMPRPPTLMLHGRSAETSKSSEKDQSHSIGTVSMTQLHGR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_07g0018650 | OsNaBo_07g0018650.02 | Chr07 | 21396981 | 21403455 | - | IsoSeq | ||
| CDS seq | atggtacagacatctgttacatggttaagaaggcagcacaagagtgggagactgtctggatgcaaccatcaaatgagtgtgagtactatgctacgtgtggcgcaaatgctaaatgcactgccatgcaagatggcaaggcaaaatgtacct |
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| Protein seq | MVQTSVTWLRRQHKSGRLSGCNHQMSVSTMLRVAQMLNALPCKMARQNVP |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.101134 | 32.059109 | 7.820734 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0551300 | RBH | 3.075196 | 2.662845 | 5.468925 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g36590 | RBH | 1.855880 | 1.767842 | 1.288617 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0551300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0018950 | RBH | 0.065016 | 7.100993 | 5.030859 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0018880 | RBH | 0.178734 | 1.488754 | 2.133801 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0018820 | RBH | 0.296895 | 13.929352 | 7.388903 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0018720 | RBH | 0.126713 | 0.315849 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0018770 | RBH | 5.803432 | 31.396999 | 11.737668 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0357600 | RBH | 7.513707 | 27.6001775 | 21.2363155 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0019250 | RBH | 0.145182 | 1.142302 | 1.005067 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0369600 | RBH | 11.7263315 | 38.9149895 | 22.671424 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0018580 | RBH | 0.000000 | 0.356187 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0018680 | RBH | 0.487313 | 21.771563 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0018560 | RBH | 3.999266 | 23.546766 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0018850 | RBH | 0.511707 | 1.569898 | 1.200642 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0018680 | RBH | 0.212174 | 23.841850 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G018530 | RBH | 0.000000 | 3.407990 | 2.101558 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0018610 | RBH | 0.0 | 0.0 | 0.0 |
