Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_07g0017760 | OGI:07058990 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr07:20545944-20549068 | ||||||||
| Gene Symbol | RLCK235, OsRLCK235, - | ||||||||||
| DNA seq | atgctcgccgccggctatggcgtcctcgccgtcgccgccgccgtcgtcctcacgctgccctcggccgtgcgtgccgcgccctcgaacatctgcgacatgggcgtcgcgacgtacgctgccaacagcacgttcgaggcgaacctggaccgcctcggcgccgagctccccgccaacgtctccgcggcgcgcgccaccggcggctacgcggtcgccaccgtcggcgcggcgcccgacctggtctacgcgctcgcgctctgccgcggcgacgtgaacgcctcggcctgcggcgcgtgcgtcgcggcggcgttcgccgacgggaagcggagctgccccgggatcaagggcgccaccgtctccgggcccggggacggctgcgtgctccgctactccggccagagcttcatgaatttcctcagcaccgagcaatggcaggtctcagagatactgtacggacaccatctatatcccattcccaccattgtttcttccaagcatattatcattggtagaattaatcactaatcagagaaactaatcactactagctcgttacaaacagttggtatcccgaccatgccacggacagcatcaaggtgccggacgttggctggttcaacgccgccgtcgcgaagatcctcgccgccctggtcgagcacacttgggccacgacgacgagcaacgcgaccgccaagaagtatttctccacgggtgaggaggaattcaaccccaagatctacggattcgtgcagtgcgtgccggacttgtcgccggagcagtgcaaggaatgcgttaggacgctccacgatcaggcgaaaatcaactacatgggcaacagccttccgtgggctagtacttattcggtgtggtgcagtctgatgtatagcgttcggccgttcttcggtggccgggcgatgctgcagctctcgccgccgctgccgccggcggtcgatactccggttggtactcatgagcctggagcaggttcgactttatacttcgggTtttttttttttgggtagagttctaacttctaaatttagctttagaagttaggtttagagtacagttgtggagcggtctaaactcagttttacctctctattttattttatgagaacattccacccagctCccctcctattttagatagagctgacacagccaaacaggcccttcttgtttttccatgaaaattatttgtcctaattcattgaagttcatgatttggtttctgcagggaagaaaaagagcgtagcaggactcgctgcaggcctcgcttgttcagttggggtactcttgatcctttcagttcttgtgttcgttcgtttcaggagaaggaccaaggctgccgagactgaccaccgtgagtagcattagcatatagtctctgttcagtagctgaaatttgctgttacctgatatgatcttgtcaaatgtcaacagctttaaagaagataacgagagcacagtgcatgatttttgatctgcctacactgcaagaggcgaccgagaacttctcggagaacaataagcttggtgagggtggttttggtactgtatacaaggtaagttagcttgtaaaattacaagacaacagtttgaaatgtactgtgaactagtaatctgtagagtatttgtctgaaaatcaatgtgttcagggagtactttcagatggacaagaagttgcagtgaagaaacttttaggaacaactgggcatggattggatcaactacataacgaggtcctgctattggcagagcttcagcacaagaaccttgttaggctacagggattttgcttgcatcaagagcagacactgctggtttacgaatacatcaagaacgggagcctggacaacattctattcggtaattttccttcccaatcaacgcttcagaaacacaccgataactctgatttttgaatagaatttttcagaaacattctgttcggtaattgtcttgggaaacattctagtatttggtaattttacttcatgccaagtatgtaaaacaaaaatagaataaattgagcaatgcacatcttcaaattagtgtgaagtactgaatatgtactgtactgtactgtaccatttctggcaaacaagttaaatagctaagaacaagatgtgcatccacttccttaactctactatagatgcgcgattatgattaagttgcgctattttgtccttatagataccaccaaaggaaattcactcaactgggagcaacagtacaacatcattcttggaattgctaagggtatactgtatcttcacgaggattcaagcttgaggatcattcaccgtgatctgaaatcaaataacattctacttggtgaggacatggaaccaaaaattgcagattttggattggcaaggctgctaggagaaggtcatactcattctaggacaaccagagttgttggaacattgtaagctcatgtgcattataaagccttcatagatggtaaatattgatatatttatgtttccaagcctaatggttatatttttttttttgcagcggttatatggcacccgagtacgtagcagacggaaatgtgtcaaccaagatagacatttttagctttggtgtgttggtccttgaaattgtgatgaggagaaggaactccgattctggtgatcatgataatgtgaatctcctgactgatgtaagtgcttaacaatactgacctttctccggtatgcatttgtatacaatgtttaagtttcagaccggtaatcggtctatttcatataacaaactaacatcaacgtgtctaataggtctggaatagctggacaaaagggacaatttcacaattcattgaccaatcgcttgatgggtactctcgaagccaagccatgcgatgcatccacattgggctattgtgtgtccagccggaccctggtgagaggcctcatatatcatctgtcattttcatgttaaccagggaaaacatggagcttcagccaccagcacaacctgcattcttctttgggacagaatcggcttcctcttctacatcatgtgggcaacgcagctatgtgtatgaccgctatggttttgctagcgtttctgtaaatgatgttacactcaccgagccatatcctagatga
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| CDS seq | atgctcgccgccggctatggcgtcctcgccgtcgccgccgccgtcgtcctcacgctgccctcggccgtgcgtgccgcgccctcgaacatctgcgacatgggcgtcgcgacgtacgctgccaacagcacgttcgaggcgaacctggaccgcctcggcgccgagctccccgccaacgtctccgcggcgcgcgccaccggcggctacgcggtcgccaccgtcggcgcggcgcccgacctggtctacgcgctcgcgctctgccgcggcgacgtgaacgcctcggcctgcggcgcgtgcgtcgcggcggcgttcgccgacgggaagcggagctgccccgggatcaagggcgccaccgtctccgggcccggggacggctgcgtgctccgctactccggccagagcttcatgaatttcctcagcaccgagcaatggcaggtctcagagatactttggtatcccgaccatgccacggacagcatcaaggtgccggacgttggctggttcaacgccgccgtcgcgaagatcctcgccgccctggtcgagcacacttgggccacgacgacgagcaacgcgaccgccaagaagtatttctccacgggtgaggaggaattcaaccccaagatctacggattcgtgcagtgcgtgccggacttgtcgccggagcagtgcaaggaatgcgttaggacgctccacgatcaggcgaaaatcaactacatgggcaacagccttccgtgggctactttaaagaagataacgagagcacagtgcatgatttttgatctgcctacactgcaagaggcgaccgagaacttctcggagaacaataagcttggtgagggtggttttggtactgtatacaagttgcgctattttgtccttatagataccaccaaaggaaattcactcaactgggagcaacagtacaacatcattcttggaattgctaagggtatactgtatcttcacgaggattcaagcttgaggatcattcaccgtgatctgaaatcaaataacattctacttggtgaggacatggaaccaaaaattgcagattttggattggcaaggctgctaggagaaggtcatactcattctaggacaaccagagttgttggaacattcggttatatggcacccgagtacgtagcagacggaaatgtgtcaaccaagatagacatttttagctttggtgtgttggtccttgaaattgtgatgaggagaaggaactccgattctggtgatcatgataatgtgaatctcctgactgatgtctggaatagctggacaaaagggacaatttcacaattcattgaccaatcgcttgatgggtactctcgaagccaagccatgcgatgcatccacattgggctattgtgtgtccagccggaccctggtgagaggcctcatatatcatctgtcattttcatgttaaccagggaaaacatggagcttcagccaccagcacaacctgcattcttctttgggacagaatcggcttcctcttctacatcatgtgggcaacgcagctatgtgtatgaccgctatggttttgctagcgtttctgtaaatgatgttacactcaccgagccatatcctagatga
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| Protein seq | MLAAGYGVLAVAAAVVLTLPSAVRAAPSNICDMGVATYAANSTFEANLDRLGAELPANVSAARATGGYAVATVGAAPDLVYALALCRGDVNASACGACVAAAFADGKRSCPGIKGATVSGPGDGCVLRYSGQSFMNFLSTEQWQVSEILWYPDHATDSIKVPDVGWFNAAVAKILAALVEHTWATTTSNATAKKYFSTGEEEFNPKIYGFVQCVPDLSPEQCKECVRTLHDQAKINYMGNSLPWATLKKITRAQCMIFDLPTLQEATENFSENNKLGEGGFGTVYKLRYFVLIDTTKGNSLNWEQQYNIILGIAKGILYLHEDSSLRIIHRDLKSNNILLGEDMEPKIADFGLARLLGEGHTHSRTTRVVGTFGYMAPEYVADGNVSTKIDIFSFGVLVLEIVMRRRNSDSGDHDNVNLLTDVWNSWTKGTISQFIDQSLDGYSRSQAMRCIHIGLLCVQPDPGERPHISSVIFMLTRENMELQPPAQPAFFFGTESASSSTSCGQRSYVYDRYGFASVSVNDVTLTEPYPR |
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| Function | Cysteine-rich receptor-like protein kinase 8 [UniProtKB/Swiss-Prot:O65468] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_07g0017760 | OsNaBo_07g0017760.01 | Chr07 | 20545944 | 20549068 | + | NAM | ||
| CDS seq | atgctcgccgccggctatggcgtcctcgccgtcgccgccgccgtcgtcctcacgctgccctcggccgtgcgtgccgcgccctcgaacatctgcgacatgggcgtcgcgacgtacgctgccaacagcacgttcgaggcgaacctggaccgcctcggcgccgagctccccgccaacgtctccgcggcgcgcgccaccggcggctacgcggtcgccaccgtcggcgcggcgcccgacctggtctacgcgctcgcgctctgccgcggcgacgtgaacgcctcggcctgcggcgcgtgcgtcgcggcggcgttcgccgacgggaagcggagctgccccgggatcaagggcgccaccgtctccgggcccggggacggctgcgtgctccgctactccggccagagcttcatgaatttcctcagcaccgagcaatggcaggtctcagagatactttggtatcccgaccatgccacggacagcatcaaggtgccggacgttggctggttcaacgccgccgtcgcgaagatcctcgccgccctggtcgagcacacttgggccacgacgacgagcaacgcgaccgccaagaagtatttctccacgggtgaggaggaattcaaccccaagatctacggattcgtgcagtgcgtgccggacttgtcgccggagcagtgcaaggaatgcgttaggacgctccacgatcaggcgaaaatcaactacatgggcaacagccttccgtgggctactttaaagaagataacgagagcacagtgcatgatttttgatctgcctacactgcaagaggcgaccgagaacttctcggagaacaataagcttggtgagggtggttttggtactgtatacaagttgcgctattttgtccttatagataccaccaaaggaaattcactcaactgggagcaacagtacaacatcattcttggaattgctaagggtatactgtatcttcacgaggattcaagcttgaggatcattcaccgtgatctgaaatcaaataacattctacttggtgaggacatggaaccaaaaattgcagattttggattggcaaggctgctaggagaaggtcatactcattctaggacaaccagagttgttggaacattcggttatatggcacccgagtacgtagcagacggaaatgtgtcaaccaagatagacatttttagctttggtgtgttggtccttgaaattgtgatgaggagaaggaactccgattctggtgatcatgataatgtgaatctcctgactgatgtctggaatagctggacaaaagggacaatttcacaattcattgaccaatcgcttgatgggtactctcgaagccaagccatgcgatgcatccacattgggctattgtgtgtccagccggaccctggtgagaggcctcatatatcatctgtcattttcatgttaaccagggaaaacatggagcttcagccaccagcacaacctgcattcttctttgggacagaatcggcttcctcttctacatcatgtgggcaacgcagctatgtgtatgaccgctatggttttgctagcgtttctgtaaatgatgttacactcaccgagccatatcctagatga
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| Protein seq | MLAAGYGVLAVAAAVVLTLPSAVRAAPSNICDMGVATYAANSTFEANLDRLGAELPANVSAARATGGYAVATVGAAPDLVYALALCRGDVNASACGACVAAAFADGKRSCPGIKGATVSGPGDGCVLRYSGQSFMNFLSTEQWQVSEILWYPDHATDSIKVPDVGWFNAAVAKILAALVEHTWATTTSNATAKKYFSTGEEEFNPKIYGFVQCVPDLSPEQCKECVRTLHDQAKINYMGNSLPWATLKKITRAQCMIFDLPTLQEATENFSENNKLGEGGFGTVYKLRYFVLIDTTKGNSLNWEQQYNIILGIAKGILYLHEDSSLRIIHRDLKSNNILLGEDMEPKIADFGLARLLGEGHTHSRTTRVVGTFGYMAPEYVADGNVSTKIDIFSFGVLVLEIVMRRRNSDSGDHDNVNLLTDVWNSWTKGTISQFIDQSLDGYSRSQAMRCIHIGLLCVQPDPGERPHISSVIFMLTRENMELQPPAQPAFFFGTESASSSTSCGQRSYVYDRYGFASVSVNDVTLTEPYPR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0538700 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g35410 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0538700 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0018050 | RBH | 0.000000 | 10.752849 | 0.092407 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0017980 | RBH | 0.0 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0017960 | RBH | 0.000000 | 4.019771 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0017840 | RBH | 0.0 | 0.206698 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0017990 | RBH | 0.0 | 0.000000 | 0.982317 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0345800 | SBH | 0.2276545 | 6.7568605 | 0.3926215 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0018490 | RBH | 0.0 | 0.089708 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0358400 | RBH | 1.1841445 | 13.820534 | 1.580925 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0017720 | RBH | 0.000000 | 0.077913 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0017890 | RBH | 0.0 | 3.362455 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0017770 | RBH | 0.0 | 6.303500 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0018060 | RBH | 0.086421 | 1.256969 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0017840 | RBH | 0.022797 | 2.671642 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G017820 | RBH | 0.000000 | 0.778417 | 0.085370 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0017630 | RBH | 0.466285 | 10.423672 | 0.741305 |
